datalog-theme 0.7.0 → 0.9.0

data/_includes/header.html

@@ -1,10 +1,31 @@
 {% assign localization_config = site.theme_options.localization %}
 {% assign navigation_data = site.data.navigation %}
+{%- comment -%} `header:` (or `main:`) in _data/navigation.yml lists the links. Without it the header has no navigation, rather than links to sections the site may not have. {%- endcomment -%}
+{% assign nav_items = navigation_data.header | default: navigation_data.main %}
+{%- comment -%}
+The navigation is the same on every page except for which links mark the current
+section, so header/navigation.html renders from the indexes of those links (",2,")
+and is cached for each distinct set.
+{%- endcomment -%}
+{% assign page_contexts = '' | split: '' %}
+{% if page.section %}{% assign page_contexts = page_contexts | push: page.section %}{% endif %}
+{% if page.layout %}{% assign page_contexts = page_contexts | push: page.layout %}{% endif %}
+{% if page.collection %}{% assign page_contexts = page_contexts | push: page.collection %}{% endif %}
+{% if page.type %}{% assign page_contexts = page_contexts | push: page.type %}{% endif %}
+{%- capture active_items -%}
+  {%- for item in nav_items -%}
+    {%- assign item_url = item.url | relative_url -%}
+    {%- if page.url == item.url or page.url == item_url -%},{{ forloop.index0 }}
+    {%- elsif item.section and page_contexts contains item.section -%},{{ forloop.index0 }}
+    {%- elsif item.url != '/' and page.url contains item.url -%},{{ forloop.index0 }}
+    {%- endif -%}
+  {%- endfor -%},
+{%- endcapture -%}
 <header class="site-header" role="banner" data-sticky-header>
   <div class="header-progress" aria-hidden="true">
     <progress class="header-progress__bar" value="0" max="100" data-scroll-progress></progress>
   </div>
-  <div class="visually-hidden" aria-live="polite" id="progress-announcement">Reading progress: <span data-scroll-progress-value>0</span>%</div>
+  {%- comment -%} No live region for the percentage: screen readers announced it on every scroll event. {%- endcomment %}
   <div class="container header-container">
     <div class="header-primary">
       {% assign brand_symbol = site.brand.accent_symbol | default: '∀ data · Σ insights' | strip %}
@@ -18,7 +39,7 @@
           </svg>
         </span>
         <span class="site-title-group">
-          <span class="site-title">{{ site.name | default: 'DataLog' }}</span>
+          <span class="site-title">{{ site.name | default: site.title }}</span>
           <span class="site-tagline">{{ brand_symbol }}</span>
         </span>
       </a>
@@ -41,30 +62,18 @@
             </svg>
           </button>
           {% endif %}
+          {% if nav_items.size > 0 %}
           <button class="header-control header-control--icon nav-toggle" type="button" aria-expanded="false" aria-controls="site-nav" aria-label="Toggle navigation">
             <span aria-hidden="true">☰</span>
           </button>
+          {% endif %}
         </div>
       </div>
     </div>
-    {% assign nav_items = navigation_data.header | default: navigation_data.main %}
-    {% if nav_items == nil %}
-      {% assign nav_items = '' | split: '' %}
-      {% assign nav_items = nav_items | push: {"title": "Blog", "url": "/blog/", "section": "blog"} %}
-      {% assign nav_items = nav_items | push: {"title": "Research", "url": "/research/", "section": "research"} %}
-      {% assign nav_items = nav_items | push: {"title": "Projects", "url": "/portfolio/", "section": "portfolio"} %}
-      {% assign nav_items = nav_items | push: {"title": "Datasets", "url": "/datasets/", "section": "datasets"} %}
-      {% assign nav_items = nav_items | push: {"title": "Visualizations", "url": "/visualizations/", "section": "visualizations"} %}
-      {% assign nav_items = nav_items | push: {"title": "Academic Ops", "url": "/academic/", "section": "academic"} %}
-      {% assign nav_items = nav_items | push: {"title": "About", "url": "/about/", "section": "about"} %}
-    {% endif %}
-    {% assign page_contexts = '' | split: '' %}
-    {% if page.section %}{% assign page_contexts = page_contexts | push: page.section %}{% endif %}
-    {% if page.layout %}{% assign page_contexts = page_contexts | push: page.layout %}{% endif %}
-    {% if page.collection %}{% assign page_contexts = page_contexts | push: page.collection %}{% endif %}
-    {% if page.type %}{% assign page_contexts = page_contexts | push: page.type %}{% endif %}
+    {% if nav_items.size > 0 %}
     <nav id="site-nav" class="site-nav" role="navigation" aria-label="Primary navigation" data-open="false">
-      {% include header/navigation.html items=nav_items page=page contexts=page_contexts %}
+      {% include_cached header/navigation.html items=nav_items active=active_items lang=page.lang %}
     </nav>
+    {% endif %}
   </div>
 </header>

data/_includes/layouts/default/article.html

@@ -19,7 +19,11 @@ Renders the standard article scaffold used by the default layout.
   {%- endif -%}
   <header class="article-header">
     {%- unless hero_overlay_title -%}
-      {%- if article_page.title -%}
+      {%- comment -%}
+      `show_title: false`, in a page's front matter or a layout's, leaves the <h1> to a
+      page or layout that renders its own heading, so the page has one.
+      {%- endcomment -%}
+      {%- if article_page.title and article_page.show_title != false and layout.show_title != false -%}
         <h1 class="article-title" itemprop="headline">{{ article_page.title }}</h1>
       {%- endif -%}
       {%- if article_page.subtitle -%}
@@ -48,14 +52,12 @@ Renders the standard article scaffold used by the default layout.
           </dd>
         </div>
       {%- endif -%}
-      {%- assign author_name = article_page.author | default: site.author.name -%}
+      {%- assign article_authors = article_page | page_authors -%}
       {%- comment -%} `show_author: false` hides the byline, for pages that are site chrome rather than articles. {%- endcomment -%}
-      {%- if author_name and article_page.show_author != false -%}
+      {%- if article_authors.size > 0 and article_page.show_author != false -%}
         <div>
-          <dt class="visually-hidden">{% t 'article.meta.author' %}</dt>
-          <dd itemprop="author" itemscope itemtype="https://schema.org/Person">
-            <span itemprop="name">{{ author_name }}</span>
-          </dd>
+          <dt class="visually-hidden">{% if article_authors.size > 1 %}{% t 'article.meta.authors' %}{% else %}{% t 'article.meta.author' %}{% endif %}</dt>
+          <dd>{% include components/author-list.html people=article_authors show_affiliation=false %}</dd>
         </div>
       {%- endif -%}
     </dl>

data/_includes/meta/dynamic-services-config.html

@@ -0,0 +1,14 @@
+{%- comment -%}
+---
+optional: []
+---
+The public settings of the site's dynamic services (`dynamic_services` in
+_config.yml), for assets/js/dynamic-services/client.js, on a site that sets
+a base URL. Every reader's browser reads this, so it holds no credential:
+the configuration validator stops the build on a key that names one.
+{%- endcomment -%}
+{%- if site.dynamic_services.base_url and site.dynamic_services.base_url != '' %}
+<script nonce="{{ page.csp_nonce }}">
+  window.DatalogDynamicServices = {{ site.dynamic_services | jsonify }};
+</script>
+{%- endif -%}

data/_includes/meta/math-config.html

@@ -8,12 +8,20 @@ optional:
 Computes math rendering settings shared by layouts.
 Exposes math_enabled, math_engine, math_status_id, and math_has_expressions variables.
 
-math_enabled resolves, in order: the page's `mathjax` or `math` front matter,
-then `theme_options.math.render_on_load` (falling back to `features.mathjax`).
-With `render_on_load: auto` the engine is only loaded when the rendered page
-contains math (`$`, `\(`, `\[` or kramdown's `math/tex` scripts) or declares
-`math_expressions`; `true` loads it on every page; `false` only on pages that
-opt in.
+math_enabled resolves, in order: the page's `math` front matter, then its
+`mathjax` front matter, then `theme_options.math.render_on_load` (falling back
+to `features.mathjax`). `mathjax` is an alias read only when `math` is unset: it
+used to be read first, so a page could not turn off with `math: false` what a
+`mathjax: true` in front matter defaults had turned on.
+_plugins/math_preprocessor.rb resolves the two the same way.
+With `render_on_load: auto` the engine is only loaded on pages with math: the
+math preprocessor records each expression it wraps in `math_expressions`, and
+leaves code alone. Kramdown's `math/tex` scripts and the preprocessor's
+`math-expression--source` wrappers in the rendered page count too: notebook
+pages carry the wrappers but record no expressions of their own. Searching the
+rendered page for `$`, `\(` or `\[` instead loaded MathJax for shell variables,
+prices and escaped parentheses in code. `true` loads it on every page; `false`
+only on pages that opt in.
 {%- endcomment -%}
 {%- assign math_settings = site.theme_options.math | default: {} -%}
 {%- assign math_engine = include.page.math_engine | default: math_settings.engine | default: 'mathjax' -%}
@@ -29,13 +37,13 @@ opt in.
 {%- if math_load == nil -%}
   {%- assign math_load = site.features.mathjax -%}
 {%- endif -%}
-{%- if include.page.mathjax != nil -%}
-  {%- assign math_enabled = include.page.mathjax -%}
-{%- elsif include.page.math != nil -%}
+{%- if include.page.math != nil -%}
   {%- assign math_enabled = include.page.math -%}
+{%- elsif include.page.mathjax != nil -%}
+  {%- assign math_enabled = include.page.mathjax -%}
 {%- elsif math_load == 'auto' -%}
   {%- assign math_enabled = math_has_expressions -%}
-  {%- if content contains 'math/tex' or content contains '$' or content contains '\(' or content contains '\[' -%}
+  {%- if content contains 'math/tex' or content contains 'math-expression--source' -%}
     {%- assign math_enabled = true -%}
   {%- endif -%}
 {%- else -%}

data/_includes/meta/person-json.html

@@ -0,0 +1,27 @@
+{%- comment -%}
+---
+required:
+  - person
+---
+One schema.org Person, as JSON, for a record from `page | page_authors` or
+`page | page_contributors`. The site's own author links to the site when the
+record names no url of its own.
+{%- endcomment -%}
+{%- assign person_url = include.person.url -%}
+{%- if person_url == nil and include.person.site_author -%}{%- assign person_url = site.url -%}{%- endif -%}
+{
+    "@type": "Person",
+    "name": {{ include.person.name | jsonify }}
+    {%- if person_url -%},
+    "url": {{ person_url | absolute_url | jsonify }}
+    {%- endif -%}
+    {%- if include.person.affiliation -%},
+    "affiliation": {
+      "@type": "Organization",
+      "name": {{ include.person.affiliation | jsonify }}
+    }
+    {%- endif -%}
+    {%- if include.person.same_as.size > 0 -%},
+    "sameAs": {{ include.person.same_as | jsonify }}
+    {%- endif -%}
+  }

data/_includes/meta/publisher.html

@@ -0,0 +1,45 @@
+{%- comment -%}
+---
+optional: []
+---
+Resolves who publishes the site, for structured data. Sets publisher_type
+("Person" or "Organization"), publisher_name, publisher_url and, for an
+Organization, publisher_logo and publisher_logo_default (true when the logo is
+the theme's 512px icon, whose size is known).
+
+`publisher` in _config.yml names the publisher. Without it, the site's author
+publishes as a Person, or the site title as an Organization when there is no
+author name. The author's affiliation is not the publisher: schema.html puts it
+on the author.
+{%- endcomment -%}
+{%- assign site_author_name = site.author.name | default: site.author -%}
+{%- if site.publisher.type == 'Organization' -%}
+  {%- assign publisher_type = 'Organization' -%}
+{%- else -%}
+  {%- assign publisher_type = 'Person' -%}
+{%- endif -%}
+{%- assign publisher_name = site.publisher.name -%}
+{%- if publisher_type == 'Person' -%}
+  {%- assign publisher_name = publisher_name | default: site_author_name -%}
+  {%- if publisher_name == nil or publisher_name == '' -%}
+    {%- assign publisher_type = 'Organization' -%}
+  {%- endif -%}
+{%- endif -%}
+{%- if publisher_type == 'Organization' -%}
+  {%- assign publisher_name = publisher_name | default: site.title -%}
+{%- endif -%}
+{%- if site.publisher.url -%}
+  {%- assign publisher_url = site.publisher.url | absolute_url -%}
+{%- else -%}
+  {%- assign publisher_url = site.url -%}
+{%- endif -%}
+{%- assign publisher_logo = nil -%}
+{%- assign publisher_logo_default = false -%}
+{%- if publisher_type == 'Organization' -%}
+  {%- if site.publisher.logo -%}
+    {%- assign publisher_logo = site.publisher.logo | absolute_url -%}
+  {%- else -%}
+    {%- assign publisher_logo = '/assets/img/favicons/android-chrome-512x512.png' | absolute_url -%}
+    {%- assign publisher_logo_default = true -%}
+  {%- endif -%}
+{%- endif -%}

data/_includes/meta/schema.html

@@ -10,12 +10,13 @@ Provides rich structured data for:
 - Article/BlogPosting/TechnicalArticle schema for posts
 - WebPage schema for standard pages
 - Author information with social profile links
-- Publisher organization with branding
+- Publisher: a Person or an Organization, from `publisher` in _config.yml
 - Images, keywords, and content metadata
 
 Defaults to TechnicalArticle for posts, WebPage for other pages.
 {%- endcomment -%}
 {%- assign schema_page = include.page -%}
+{%- include meta/publisher.html -%}
 {%- assign is_post = false -%}
 {%- if schema_page.layout == 'post' or schema_page.collection == 'posts' -%}
   {%- assign is_post = true -%}
@@ -30,7 +31,8 @@ Defaults to TechnicalArticle for posts, WebPage for other pages.
 {%- assign schema_nonce = schema_page.csp_nonce | default: page.csp_nonce | default: nonce_lookup[schema_page.path] | default: nonce_lookup[page.path] | default: nonce_lookup[page.url] -%}
 {%- assign description = schema_page.description | default: schema_page.excerpt | strip_html | strip_newlines | truncate: 300 -%}
 {%- assign page_url = schema_page.url | absolute_url -%}
-{%- assign author_name = schema_page.author | default: site.author.name -%}
+{%- assign schema_authors = schema_page | page_authors -%}
+{%- assign schema_contributors = schema_page | page_contributors -%}
 {%- assign word_count = schema_page.content | strip_html | number_of_words -%}
 {%- assign modified = schema_page.last_modified_at | default: schema_page.updated | default: schema_page.date -%}
 <script type="application/ld+json" nonce="{{ schema_nonce }}">
@@ -41,8 +43,9 @@ Defaults to TechnicalArticle for posts, WebPage for other pages.
     "@type": "WebPage",
     "@id": {{ page_url | jsonify }}
   },
-  "headline": {{ schema_page.title | truncate: 110 | jsonify }},
-  {%- if description -%}
+  "headline": {{ schema_page.title | default: site.title | truncate: 110 | jsonify }},
+  {%- comment -%} Values the page doesn't have are left out: "description": "" and "dateModified": "" are invalid structured data. {%- endcomment -%}
+  {%- if description and description != "" -%}
   "description": {{ description | jsonify }},
   {%- endif -%}
   "url": {{ page_url | jsonify }},
@@ -64,7 +67,9 @@ Defaults to TechnicalArticle for posts, WebPage for other pages.
   {%- if schema_page.date -%}
   "datePublished": "{{ schema_page.date | date_to_xmlschema }}",
   {%- endif -%}
+  {%- if modified -%}
   "dateModified": "{{ modified | date_to_xmlschema }}",
+  {%- endif -%}
   {%- if word_count > 0 -%}
   "wordCount": {{ word_count }},
   {%- endif -%}
@@ -77,38 +82,35 @@ Defaults to TechnicalArticle for posts, WebPage for other pages.
   {%- if is_post -%}
   "inLanguage": "{{ schema_page.lang | default: site.locale | default: 'en' | split: '_' | first }}",
   {%- endif -%}
-  "author": {
-    "@type": "Person",
-    "name": {{ author_name | jsonify }},
-    "url": {{ site.url | jsonify }}
-    {%- if site.author.orcid -%},
-    "sameAs": [
-      {{ site.author.orcid | jsonify }}
-      {%- if site.author.github -%},
-      "https://github.com/{{ site.author.github }}"
-      {%- endif -%}
-      {%- if site.author.twitter -%},
-      "https://twitter.com/{{ site.author.twitter }}"
-      {%- endif -%}
-      {%- if site.author.linkedin -%},
-      "https://linkedin.com/in/{{ site.author.linkedin }}"
-      {%- endif -%}
-      {%- if site.author.researchgate -%},
-      {{ site.author.researchgate | jsonify }}
-      {%- endif -%}
-    ]
-    {%- endif -%}
-  },
+  {%- comment -%} One author is an object, as it always was; several are a list; a site without an author has none. {%- endcomment -%}
+  {%- if schema_authors.size > 0 -%}
+  "author": {% if schema_authors.size > 1 %}[{% endif %}
+  {%- for author in schema_authors -%}
+  {% include meta/person-json.html person=author %}{% unless forloop.last %},{% endunless %}
+  {%- endfor -%}
+  {% if schema_authors.size > 1 %}]{% endif %},
+  {%- endif -%}
+  {%- if schema_contributors.size > 0 -%}
+  "contributor": [
+  {%- for contributor in schema_contributors -%}
+  {% include meta/person-json.html person=contributor %}{% unless forloop.last %},{% endunless %}
+  {%- endfor -%}
+  ],
+  {%- endif -%}
   "publisher": {
-    "@type": "Organization",
-    "name": {{ site.author.affiliation | default: site.title | jsonify }},
-    "url": {{ site.url | jsonify }},
+    "@type": {{ publisher_type | jsonify }},
+    "name": {{ publisher_name | jsonify }},
+    "url": {{ publisher_url | jsonify }}
+    {%- if publisher_logo -%},
     "logo": {
       "@type": "ImageObject",
-      "url": {{ '/assets/img/favicons/android-chrome-512x512.png' | absolute_url | jsonify }},
+      "url": {{ publisher_logo | jsonify }}
+      {%- if publisher_logo_default -%},
       "width": 512,
       "height": 512
+      {%- endif -%}
     }
+    {%- endif -%}
   }
   {%- if schema_page.doi -%},
   "identifier": {
@@ -120,6 +122,41 @@ Defaults to TechnicalArticle for posts, WebPage for other pages.
   {%- if schema_page.citation_key -%},
   "citation": {{ schema_page.citation_key | jsonify }}
   {%- endif -%}
+  {%- comment -%} The licence of the text and figures, and who holds the copyright. {%- endcomment -%}
+  {%- assign content_license = schema_page | page_license -%}
+  {%- if content_license -%}
+  {%- if content_license.url -%},
+  "license": {{ content_license.url | jsonify }}
+  {%- endif -%}
+  {%- if content_license.year -%},
+  "copyrightYear": {{ content_license.year | jsonify }}
+  {%- endif -%}
+  {%- if content_license.holder -%},
+  "copyrightHolder": {% if content_license.people %}{% if content_license.holders.size > 1 %}[{% endif %}
+  {%- for holder in content_license.holders -%}
+  { "@type": "Person", "name": {{ holder | jsonify }} }{% unless forloop.last %},{% endunless %}
+  {%- endfor -%}
+  {% if content_license.holders.size > 1 %}]{% endif %}{% else %}{ "@type": "Organization", "name": {{ content_license.holder | jsonify }} }{% endif %}
+  {%- endif -%}
+  {%- endif -%}
+  {%- comment -%} Each correction in the revision history, with its date, summary and link. {%- endcomment -%}
+  {%- assign corrections = schema_page.revisions | where: 'type', 'correction' -%}
+  {%- if corrections and corrections.size > 0 -%},
+  "correction": [
+  {%- for correction in corrections -%}
+  {
+    "@type": "CorrectionComment",
+    "datePublished": "{{ correction.date | date_to_xmlschema }}",
+    "text": {{ correction.summary | jsonify }}
+    {%- if correction.details_url -%}
+    {%- assign correction_url = correction.details_url -%}
+    {%- unless correction_url contains '://' -%}{%- assign correction_url = correction_url | absolute_url -%}{%- endunless -%},
+    "url": {{ correction_url | jsonify }}
+    {%- endif -%}
+  }{% unless forloop.last %},{% endunless %}
+  {%- endfor -%}
+  ]
+  {%- endif -%}
 }
 </script>
 {%- comment -%} Add BreadcrumbList schema for posts {%- endcomment -%}

data/_includes/meta/scholarly.html

@@ -0,0 +1,121 @@
+{%- comment -%}
+---
+optional: []
+---
+Scholarly discovery metadata for a page read as a research article: the
+Highwire meta tags Google Scholar and reference managers read, and their
+Dublin Core equivalents. Only a page the `scholarly` filter accepts gets them
+(_plugins/scholarly.rb): a research article, a page with `scholarly: true`,
+or every post when _config.yml sets `scholarly: true`. A field the page
+lacks leaves its tag out. The authors are the page's (page_authors), as in
+the byline, the JSON-LD and the citation exports; `citation_authors` names
+the indexed authors alone.
+{%- endcomment -%}
+{%- assign is_scholarly = page | scholarly -%}
+{%- if is_scholarly and page.title -%}
+{%- include meta/publisher.html -%}
+{%- assign scholarly_title = page.citation_title | default: page.title | strip_html | normalize_whitespace -%}
+{%- assign scholarly_url = page.url | absolute_url -%}
+{%- assign scholarly_authors = page | page_authors -%}
+{%- assign scholarly_names = scholarly_authors | map: 'name' -%}
+{%- assign scholarly_override = false -%}
+{%- if page.citation_authors -%}
+  {%- assign scholarly_override = true -%}
+  {%- capture citation_source_json -%}{{ page.citation_authors | jsonify }}{%- endcapture -%}
+  {%- assign citation_source_first = citation_source_json | slice: 0, 1 -%}
+  {%- if citation_source_first == '[' -%}
+    {%- assign scholarly_names = page.citation_authors -%}
+  {%- else -%}
+    {%- assign scholarly_names = page.citation_authors | replace: ';', ',' | split: ',' -%}
+  {%- endif -%}
+{%- endif -%}
+{%- assign scholarly_pdf = page.pdf_url | default: page.citation_pdf -%}
+{%- assign scholarly_journal = page.journal | default: page.publication -%}
+{%- assign scholarly_issue = page.issue | default: page.number -%}
+{%- assign scholarly_keywords = page.keywords | default: page.tags -%}
+{%- assign scholarly_publisher = page.publisher | default: publisher_name -%}
+{%- assign scholarly_language = page.lang | default: site.locale | default: 'en' | split: '_' | first | split: '-' | first -%}
+{%- assign scholarly_license = page | page_license -%}
+{%- assign scholarly_description = page.description | default: page.excerpt | strip_html | normalize_whitespace | truncate: 300 -%}
+<meta name="citation_title" content="{{ scholarly_title | escape }}" />
+{%- if scholarly_override %}
+{%- for name in scholarly_names %}
+<meta name="citation_author" content="{{ name | strip | escape }}" />
+{%- endfor %}
+{%- else %}
+{%- for author in scholarly_authors %}
+<meta name="citation_author" content="{{ author.name | strip | escape }}" />
+{%- if author.affiliation %}
+<meta name="citation_author_institution" content="{{ author.affiliation | strip | escape }}" />
+{%- endif %}
+{%- if author.orcid %}
+<meta name="citation_author_orcid" content="{{ author.orcid | escape }}" />
+{%- endif %}
+{%- endfor %}
+{%- endif %}
+{%- if page.date %}
+<meta name="citation_publication_date" content="{{ page.date | date: '%Y/%m/%d' }}" />
+{%- endif %}
+<meta name="citation_public_url" content="{{ scholarly_url }}" />
+<meta name="citation_fulltext_html_url" content="{{ scholarly_url }}" />
+{%- if scholarly_pdf %}
+<meta name="citation_pdf_url" content="{{ scholarly_pdf | absolute_url }}" />
+{%- endif %}
+{%- if page.doi %}
+<meta name="citation_doi" content="{{ page.doi | escape }}" />
+{%- endif %}
+{%- if scholarly_journal %}
+<meta name="citation_journal_title" content="{{ scholarly_journal | escape }}" />
+{%- endif %}
+{%- if page.conference %}
+<meta name="citation_conference_title" content="{{ page.conference | escape }}" />
+{%- endif %}
+{%- if page.volume %}
+<meta name="citation_volume" content="{{ page.volume | escape }}" />
+{%- endif %}
+{%- if scholarly_issue %}
+<meta name="citation_issue" content="{{ scholarly_issue | escape }}" />
+{%- endif %}
+{%- if page.pages %}
+{%- assign page_range = page.pages | append: '' | replace: '–', '-' | replace: '—', '-' | split: '-' %}
+<meta name="citation_firstpage" content="{{ page_range[0] | strip | escape }}" />
+{%- if page_range.size > 1 %}
+<meta name="citation_lastpage" content="{{ page_range[1] | strip | escape }}" />
+{%- endif %}
+{%- endif %}
+{%- if page.issn %}
+<meta name="citation_issn" content="{{ page.issn | escape }}" />
+{%- endif %}
+{%- if page.isbn %}
+<meta name="citation_isbn" content="{{ page.isbn | escape }}" />
+{%- endif %}
+<meta name="citation_publisher" content="{{ scholarly_publisher | escape }}" />
+<meta name="citation_language" content="{{ scholarly_language }}" />
+{%- if scholarly_keywords and scholarly_keywords.size > 0 %}
+<meta name="citation_keywords" content="{{ scholarly_keywords | join: '; ' | escape }}" />
+{%- endif %}
+<link rel="schema.DC" href="http://purl.org/dc/elements/1.1/" />
+<meta name="DC.title" content="{{ scholarly_title | escape }}" />
+{%- for name in scholarly_names %}
+<meta name="DC.creator" content="{{ name | strip | escape }}" />
+{%- endfor %}
+{%- if page.date %}
+<meta name="DC.date" content="{{ page.date | date: '%Y-%m-%d' }}" />
+{%- endif %}
+{%- if page.doi %}
+{%- assign scholarly_identifier = page.doi -%}
+{%- unless scholarly_identifier contains '://' -%}{%- assign scholarly_identifier = 'https://doi.org/' | append: page.doi -%}{%- endunless %}
+<meta name="DC.identifier" content="{{ scholarly_identifier | escape }}" />
+{%- else %}
+<meta name="DC.identifier" content="{{ scholarly_url }}" />
+{%- endif %}
+<meta name="DC.type" content="Text" />
+<meta name="DC.language" content="{{ scholarly_language }}" />
+<meta name="DC.publisher" content="{{ scholarly_publisher | escape }}" />
+{%- if scholarly_license.url %}
+<meta name="DC.rights" content="{{ scholarly_license.url | escape }}" />
+{%- endif %}
+{%- if scholarly_description and scholarly_description != '' %}
+<meta name="DC.description" content="{{ scholarly_description | escape }}" />
+{%- endif %}
+{%- endif -%}

data/_includes/meta/scripts-loader.html

@@ -2,26 +2,18 @@
 ---
 required:
   - location
-optional:
-  - syntax_config
 ---
-Outputs Prism assets in the head and shared data bootstrapping scripts in the body.
-Pass location="head" or location="body" to control which block renders.
+Outputs the page data scripts and the feature loader at the end of the body
+(location="body"). location="head" used to render Prism's scripts. Code is now
+highlighted by Rouge when the site builds, so the head renders nothing.
 {%- endcomment -%}
-{%- assign syntax = include.syntax_config | default: site.theme_options.syntax_highlighting | default: {} -%}
-{%- assign prism_cdn = syntax.cdn | default: 'https://cdn.jsdelivr.net/npm/prismjs@1.29.0' -%}
-{%- assign default_components = 'python|r|sql|julia|javascript' | split: '|' -%}
-{%- assign prism_components = syntax.components | default: default_components -%}
-{%- include meta/syntax-config.html -%}
-{%- if include.location == 'head' and prism_enabled -%}
-  <script defer src="{{ (prism_cdn | append: '/prism.min.js') | add_sri }}"></script>
-  {%- for component in prism_components -%}
-    {%- unless component == 'core' -%}
-      <script defer src="{{ (prism_cdn | append: '/components/prism-' | append: component | append: '.min.js') | add_sri }}"></script>
-    {%- endunless -%}
-  {%- endfor -%}
-  <script defer src="{{ (prism_cdn | append: '/plugins/normalize-whitespace/prism-normalize-whitespace.min.js') | add_sri }}"></script>
-{%- elsif include.location == 'body' -%}
+{%- if include.location == 'body' -%}
+  {%- comment -%}
+    Only academic.js reads the academic and publication data, and the loader
+    runs it only on pages with citation metrics, tables or charts. Inlined on
+    every page, it was a quarter of the home page's HTML.
+  {%- endcomment -%}
+  {%- if content contains 'data-citation-metric' or content contains 'data-citation-table' or content contains 'data-citation-chart' -%}
   {%- assign publications = site.data.publications | default: {} -%}
   <script nonce="{{ page.csp_nonce }}">
     window.DatalogAcademic = {{ site.data.academic | jsonify }};
@@ -32,22 +24,16 @@ Pass location="head" or location="body" to control which block renders.
       "yearly_totals": {{ publications.yearly_totals | jsonify }}
     };
   </script>
+  {%- endif -%}
+  {%- comment -%} Not include_cached: scripts.html reads the page's math and notebook settings and CSP nonce. {%- endcomment -%}
   {% include scripts.html %}
+  {%- comment -%}
+    core/github-cards.js reads the integration settings. The theme options and
+    content taxonomy were inlined here as well, and no script read them.
+  {%- endcomment -%}
   <script nonce="{{ page.csp_nonce }}">
-    window.DatalogTheme = {{ site.theme_options | jsonify }};
     window.DatalogIntegrations = {{ site.integrations | jsonify }};
-    window.DatalogContent = {{ site.content | jsonify }};
-  </script>
-  <script nonce="{{ page.csp_nonce }}">
-    document.addEventListener('DOMContentLoaded', function () {
-      if (window.Prism && window.Prism.plugins && window.Prism.plugins.NormalizeWhitespace) {
-        Prism.plugins.NormalizeWhitespace.setDefaults({
-          'remove-trailing': true,
-          'remove-indent': true,
-          'left-trim': true,
-          'right-trim': true
-        });
-      }
-    });
   </script>
+  {%- comment -%} The dynamic services' public settings, on a site that has a backend. {%- endcomment -%}
+  {% include meta/dynamic-services-config.html %}
 {%- endif -%}

data/_includes/meta/webmention-discovery.html

@@ -0,0 +1,14 @@
+{%- comment -%}
+---
+optional: []
+---
+Webmention discovery (W3C Webmention, section 3.1.2): the receiver a site
+names in `webmentions.endpoint` is advertised in every page's head, so a
+website that links here can notify it. GitHub Pages cannot send the HTTP
+Link header form, so the <link> form is the one the theme uses. Nothing is
+advertised without an endpoint or with `webmentions.enabled: false`.
+{%- endcomment -%}
+{%- assign webmentions = site.webmentions -%}
+{%- if webmentions.enabled != false and webmentions.endpoint and webmentions.endpoint != '' -%}
+<link rel="webmention" href="{{ webmentions.endpoint }}" />
+{%- endif -%}

data/_includes/post/related-posts.html

@@ -10,17 +10,14 @@ Builds a list of related posts based on overlapping tags or categories.
 Falls back to a friendly message when no related content is available.
 {%- endcomment -%}
 {%- assign related_limit = include.limit | default: 3 -%}
-{%- assign source_posts = site.collections.posts.docs | default: site.posts | default: '' | split: '' -%}
-{%- assign layout_filtered = source_posts | where: 'layout', 'post' -%}
-{%- assign collection_filtered = source_posts | where: 'collection', 'posts' -%}
-{%- assign candidate_posts = layout_filtered | concat: collection_filtered -%}
-{%- assign sorted_candidates = candidate_posts | sort: 'date' | reverse -%}
+{%- comment -%} site.posts is already newest first. {%- endcomment -%}
 {%- assign rendered_count = 0 -%}
 <section class="post-related" aria-labelledby="post-related-heading">
   <h2 id="post-related-heading">Related posts</h2>
   <ul class="post-related-list">
-    {%- for candidate in sorted_candidates -%}
-      {%- if candidate.url != include.page.url and rendered_count < related_limit -%}
+    {%- for candidate in site.posts -%}
+      {%- if rendered_count >= related_limit -%}{%- break -%}{%- endif -%}
+      {%- if candidate.url != include.page.url -%}
         {%- assign overlap = 0 -%}
         {%- if include.page.tags and candidate.tags -%}
           {%- for tag in include.page.tags -%}