daru 0.1.3.1 → 0.1.4

metadata

@@ -1,15 +1,29 @@
 --- !ruby/object:Gem::Specification
 name: daru
 version: !ruby/object:Gem::Version
-  version: 0.1.3.1
+  version: 0.1.4
 platform: ruby
 authors:
 - Sameer Deshmukh
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2016-05-12 00:00:00.000000000 Z
+date: 2016-08-19 00:00:00.000000000 Z
 dependencies:
+- !ruby/object:Gem::Dependency
+  name: backports
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
 - !ruby/object:Gem::Dependency
   name: reportbuilder
   requirement: !ruby/object:Gem::Requirement
@@ -17,7 +31,7 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '1.4'
-  type: :runtime
+  type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
@@ -31,7 +45,7 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: 1.1.1
-  type: :runtime
+  type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
@@ -122,6 +136,20 @@ dependencies:
     - - "~>"
       - !ruby/object:Gem::Version
         version: '3.4'
+- !ruby/object:Gem::Dependency
+  name: rspec-its
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
 - !ruby/object:Gem::Dependency
   name: awesome_print
   requirement: !ruby/object:Gem::Requirement
@@ -262,6 +290,62 @@ dependencies:
     - - ">="
       - !ruby/object:Gem::Version
         version: 0.40.0
+- !ruby/object:Gem::Dependency
+  name: ruby-prof
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: simplecov
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: nokogiri
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: gruff
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
 description: |
   Daru (Data Analysis in RUby) is a library for analysis, manipulation and visualization
   of data. Daru works seamlessly accross interpreters and leverages interpreter-specific
@@ -277,8 +361,8 @@ extra_rdoc_files: []
 files:
 - ".gitignore"
 - ".rspec"
+- ".rspec_formatter.rb"
 - ".rubocop.yml"
-- ".rubocop_todo.yml"
 - ".travis.yml"
 - CONTRIBUTING.md
 - Gemfile
@@ -287,6 +371,7 @@ files:
 - README.md
 - Rakefile
 - benchmarks/TradeoffData.csv
+- benchmarks/csv_reading.rb
 - benchmarks/dataframe_creation.rb
 - benchmarks/duplicating.rb
 - benchmarks/group_by.rb
@@ -319,6 +404,7 @@ files:
 - lib/daru/accessors/gsl_wrapper.rb
 - lib/daru/accessors/mdarray_wrapper.rb
 - lib/daru/accessors/nmatrix_wrapper.rb
+- lib/daru/category.rb
 - lib/daru/core/group_by.rb
 - lib/daru/core/merge.rb
 - lib/daru/core/query.rb
@@ -327,23 +413,43 @@ files:
 - lib/daru/date_time/offsets.rb
 - lib/daru/exceptions.rb
 - lib/daru/extensions/rserve.rb
+- lib/daru/formatters/table.rb
+- lib/daru/helpers/array.rb
 - lib/daru/index.rb
 - lib/daru/io/io.rb
 - lib/daru/io/sql_data_source.rb
+- lib/daru/iruby/helpers.rb
+- lib/daru/iruby/templates/dataframe.html.erb
+- lib/daru/iruby/templates/dataframe_mi.html.erb
+- lib/daru/iruby/templates/multi_index.html.erb
+- lib/daru/iruby/templates/vector.html.erb
+- lib/daru/iruby/templates/vector_mi.html.erb
 - lib/daru/maths/arithmetic/dataframe.rb
 - lib/daru/maths/arithmetic/vector.rb
 - lib/daru/maths/statistics/dataframe.rb
 - lib/daru/maths/statistics/vector.rb
 - lib/daru/monkeys.rb
-- lib/daru/plotting/dataframe.rb
-- lib/daru/plotting/vector.rb
+- lib/daru/plotting/gruff.rb
+- lib/daru/plotting/gruff/category.rb
+- lib/daru/plotting/gruff/dataframe.rb
+- lib/daru/plotting/gruff/vector.rb
+- lib/daru/plotting/nyaplot.rb
+- lib/daru/plotting/nyaplot/category.rb
+- lib/daru/plotting/nyaplot/dataframe.rb
+- lib/daru/plotting/nyaplot/vector.rb
 - lib/daru/vector.rb
 - lib/daru/version.rb
+- profile/_base.rb
+- profile/df_to_a.rb
+- profile/filter.rb
+- profile/joining.rb
+- profile/sorting.rb
+- profile/vector_each_with_index.rb
 - spec/accessors/wrappers_spec.rb
+- spec/categorical_spec.rb
 - spec/core/group_by_spec.rb
 - spec/core/merge_spec.rb
 - spec/core/query_spec.rb
-- spec/daru_spec.rb
 - spec/dataframe_spec.rb
 - spec/date_time/data_spec.rb
 - spec/date_time/index_spec.rb
@@ -351,21 +457,34 @@ files:
 - spec/extensions/rserve_spec.rb
 - spec/fixtures/bank2.dat
 - spec/fixtures/countries.json
+- spec/fixtures/empties.dat
 - spec/fixtures/matrix_test.csv
 - spec/fixtures/music_data.tsv
 - spec/fixtures/repeated_fields.csv
 - spec/fixtures/sales-funnel.csv
 - spec/fixtures/scientific_notation.csv
 - spec/fixtures/stock_data.csv
+- spec/fixtures/strings.dat
 - spec/fixtures/test_xls.xls
-- spec/index_spec.rb
+- spec/formatters/table_formatter_spec.rb
+- spec/helpers_spec.rb
+- spec/index/categorical_index_spec.rb
+- spec/index/index_spec.rb
+- spec/index/multi_index_spec.rb
 - spec/io/io_spec.rb
 - spec/io/sql_data_source_spec.rb
+- spec/iruby/dataframe_spec.rb
+- spec/iruby/helpers_spec.rb
+- spec/iruby/multi_index_spec.rb
+- spec/iruby/vector_spec.rb
 - spec/math/arithmetic/dataframe_spec.rb
 - spec/math/arithmetic/vector_spec.rb
 - spec/math/statistics/dataframe_spec.rb
 - spec/math/statistics/vector_spec.rb
 - spec/monkeys_spec.rb
+- spec/plotting/dataframe_spec.rb
+- spec/plotting/vector_spec.rb
+- spec/shared/vector_display_spec.rb
 - spec/spec_helper.rb
 - spec/support/database_helper.rb
 - spec/vector_spec.rb
@@ -414,10 +533,10 @@ specification_version: 4
 summary: Data Analysis in RUby
 test_files:
 - spec/accessors/wrappers_spec.rb
+- spec/categorical_spec.rb
 - spec/core/group_by_spec.rb
 - spec/core/merge_spec.rb
 - spec/core/query_spec.rb
-- spec/daru_spec.rb
 - spec/dataframe_spec.rb
 - spec/date_time/data_spec.rb
 - spec/date_time/index_spec.rb
@@ -425,21 +544,34 @@ test_files:
 - spec/extensions/rserve_spec.rb
 - spec/fixtures/bank2.dat
 - spec/fixtures/countries.json
+- spec/fixtures/empties.dat
 - spec/fixtures/matrix_test.csv
 - spec/fixtures/music_data.tsv
 - spec/fixtures/repeated_fields.csv
 - spec/fixtures/sales-funnel.csv
 - spec/fixtures/scientific_notation.csv
 - spec/fixtures/stock_data.csv
+- spec/fixtures/strings.dat
 - spec/fixtures/test_xls.xls
-- spec/index_spec.rb
+- spec/formatters/table_formatter_spec.rb
+- spec/helpers_spec.rb
+- spec/index/categorical_index_spec.rb
+- spec/index/index_spec.rb
+- spec/index/multi_index_spec.rb
 - spec/io/io_spec.rb
 - spec/io/sql_data_source_spec.rb
+- spec/iruby/dataframe_spec.rb
+- spec/iruby/helpers_spec.rb
+- spec/iruby/multi_index_spec.rb
+- spec/iruby/vector_spec.rb
 - spec/math/arithmetic/dataframe_spec.rb
 - spec/math/arithmetic/vector_spec.rb
 - spec/math/statistics/dataframe_spec.rb
 - spec/math/statistics/vector_spec.rb
 - spec/monkeys_spec.rb
+- spec/plotting/dataframe_spec.rb
+- spec/plotting/vector_spec.rb
+- spec/shared/vector_display_spec.rb
 - spec/spec_helper.rb
 - spec/support/database_helper.rb
 - spec/vector_spec.rb

data/.rubocop_todo.yml

@@ -1,44 +0,0 @@
-# This configuration was generated by
-# `rubocop --auto-gen-config`
-# on 2016-05-06 16:48:54 +0300 using RuboCop version 0.39.0.
-# The point is for the user to remove these configuration records
-# one by one as the offenses are removed from the code base.
-# Note that changes in the inspected code, or installation of new
-# versions of RuboCop, may require this file to be generated again.
-
-# Offense count: 66
-Metrics/AbcSize:
-  Max: 110
-
-# Offense count: 6
-Metrics/BlockNesting:
-  Max: 6
-
-# Offense count: 6
-# Configuration parameters: CountComments.
-Metrics/ClassLength:
-  Max: 1400
-
-# Offense count: 26
-Metrics/CyclomaticComplexity:
-  Max: 22
-
-# Offense count: 273
-# Configuration parameters: AllowHeredoc, AllowURI, URISchemes.
-# URISchemes: http, https
-Metrics/LineLength:
-  Max: 164
-
-# Offense count: 81
-# Configuration parameters: CountComments.
-Metrics/MethodLength:
-  Max: 100
-
-# Offense count: 3
-# Configuration parameters: CountComments.
-Metrics/ModuleLength:
-  Max: 419
-
-# Offense count: 22
-Metrics/PerceivedComplexity:
-  Max: 28

data/lib/daru/plotting/dataframe.rb

@@ -1,104 +0,0 @@
-module Daru
-  module Plotting
-    module DataFrame
-      # Plots a DataFrame with Nyaplot on IRuby using the given options. Yields
-      # the corresponding Nyaplot::Plot object and the Nyaplot::Diagram object
-      # to the block, if it is specified. See the nyaplot docs for info on how to
-      # further use these objects.
-      #
-      # Detailed instructions on use of the plotting API can be found in the
-      # notebooks whose links you can find in the README.
-      #
-      # == Options
-      #
-      # * +:type+  - Type of plot. Can be :scatter, :bar, :histogram, :line or :box.
-      # * +:x+ - Vector to be used for X co-ordinates.
-      # * +:y+ - Vector to be used for Y co-ordinates.
-      #
-      # == Usage
-      #   # Simple bar chart
-      #   df = Daru::DataFrame.new({a:['A', 'B', 'C', 'D', 'E'], b:[10,20,30,40,50]})
-      #   df.plot type: :bar, x: :a, y: :b
-      def plot opts={}
-        options = {
-          type:  :scatter
-        }.merge(opts)
-
-        plot = Nyaplot::Plot.new
-        types = extract_option :type, options
-
-        diagram =
-          case
-          when !([:scatter, :bar, :line, :histogram] & types).empty?
-            if single_diagram? options
-              add_single_diagram plot, options
-            else
-              add_multiple_diagrams plot, options
-            end
-          when types.include?(:box)
-            numeric = only_numerics(clone: false).dup_only_valid
-
-            plot.add_with_df(
-              numeric.to_nyaplotdf,
-              :box, *numeric.vectors.to_a
-            )
-          end
-
-        yield(plot, diagram) if block_given?
-
-        plot.show
-      end
-
-      private
-
-      def single_diagram? options
-        options[:x] and options[:x].is_a?(Symbol)
-      end
-
-      def add_single_diagram plot, options
-        args = [
-          to_nyaplotdf,
-          options[:type],
-          options[:x]
-        ]
-
-        args << options[:y] if options[:y]
-
-        plot.add_with_df(*args)
-      end
-
-      def add_multiple_diagrams plot, options
-        types  = extract_option :type, options
-        x_vecs = extract_option :x, options
-        y_vecs = extract_option :y, options
-
-        diagrams   = []
-        nyaplot_df = to_nyaplotdf
-        total      = x_vecs.size
-        types = types.size < total ? types*total : types
-
-        (0...total).each do |i|
-          diagrams << plot.add_with_df(
-            nyaplot_df,
-            types[i],
-            x_vecs[i],
-            y_vecs[i]
-          )
-        end
-
-        diagrams
-      end
-
-      def extract_option opt, options
-        if options[opt]
-          o = options[opt]
-          o.is_a?(Array) ? o : [o]
-        else
-          arr = options.keys
-          arr.keep_if { |a| a =~ Regexp.new("\\A#{opt}") }.sort
-          arr.map { |a| options[a] }
-        end
-      end
-    end
-  end
-end if Daru.has_nyaplot?

data/lib/daru/plotting/vector.rb

@@ -1,38 +0,0 @@
-module Daru
-  module Plotting
-    module Vector
-      # Plots a Vector with Nyaplot on IRuby using the given options. Yields the
-      # plot object (Nyaplot::Plot) and the diagram object (Nyaplot::Diagram)
-      # to the block, which can be used for setting various options as per the
-      # Nyaplot API.
-      #
-      # == Options
-      #   type (:scatter, :bar, :histogram), title, x_label, y_label, color(true/false)
-      #
-      # == Usage
-      #   vector = Daru::Vector.new [10,20,30,40], [:one, :two, :three, :four]
-      #   vector.plot(type: :bar) do |plot|
-      #     plot.title "My first plot"
-      #     plot.width 1200
-      #   end
-      def plot opts={}
-        options = {
-          type: :scatter
-        }.merge(opts)
-
-        x_axis  = options[:type] == :scatter ? Array.new(@size) { |i| i } : @index.to_a
-        plot    = Nyaplot::Plot.new
-        diagram =
-          if [:box, :histogram].include? options[:type]
-            plot.add(options[:type], @data.to_a)
-          else
-            plot.add(options[:type], x_axis, @data.to_a)
-          end
-
-        yield plot, diagram if block_given?
-
-        plot.show
-      end
-    end
-  end
-end if Daru.has_nyaplot?