complearn 0.6.2

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Files changed (104) hide show
  1. data/AUTHORS +13 -0
  2. data/COPYING +340 -0
  3. data/ChangeLog +0 -0
  4. data/INSTALL +231 -0
  5. data/Makefile +352 -0
  6. data/Makefile.am +76 -0
  7. data/Makefile.in +352 -0
  8. data/NEWS +7 -0
  9. data/README +0 -0
  10. data/aclocal.m4 +104 -0
  11. data/bin/Makefile +209 -0
  12. data/bin/Makefile.am +8 -0
  13. data/bin/Makefile.in +209 -0
  14. data/bin/labeltree +68 -0
  15. data/bin/labeltree.in +68 -0
  16. data/bin/makesvm +70 -0
  17. data/bin/makesvm.in +70 -0
  18. data/bin/maketree +98 -0
  19. data/bin/maketree.in +98 -0
  20. data/bin/ncd +43 -0
  21. data/bin/ncd.in +43 -0
  22. data/bin/ncdmatrix +54 -0
  23. data/bin/ncdmatrix.in +54 -0
  24. data/bin/ncdvector +50 -0
  25. data/bin/ncdvector.in +50 -0
  26. data/complearn-0.6.2.gem +0 -0
  27. data/complearn.gemspec +57 -0
  28. data/config.log +597 -0
  29. data/config.status +1082 -0
  30. data/configure +4922 -0
  31. data/configure.ac +91 -0
  32. data/confstat5FpLBf/config.h +65 -0
  33. data/confstat5FpLBf/subs-1.sed +50 -0
  34. data/confstat5FpLBf/subs-2.sed +13 -0
  35. data/confstat5FpLBf/subs.frag +0 -0
  36. data/confstat5FpLBf/subs.sed +59 -0
  37. data/confstat5FpLBf/undefs.sed +24 -0
  38. data/doc/FAQ.txt +67 -0
  39. data/doc/Makefile +286 -0
  40. data/doc/Makefile.am +11 -0
  41. data/doc/Makefile.in +286 -0
  42. data/doc/devguide.txt +15 -0
  43. data/doc/example.complearnrc +14 -0
  44. data/doc/examples.txt +35 -0
  45. data/doc/man/Makefile +255 -0
  46. data/doc/man/Makefile.am +11 -0
  47. data/doc/man/Makefile.in +255 -0
  48. data/doc/man/complearn.5 +91 -0
  49. data/doc/man/labeltree.1 +35 -0
  50. data/doc/man/makesvm.1 +60 -0
  51. data/doc/man/maketree.1 +58 -0
  52. data/doc/man/ncd.1 +51 -0
  53. data/doc/man/ncdmatrix.1 +40 -0
  54. data/doc/man/ncdvector.1 +42 -0
  55. data/doc/readme.txt +101 -0
  56. data/doc/userguide.txt +46 -0
  57. data/examples/genes/blueWhale.txt +1 -0
  58. data/examples/genes/cat.txt +1 -0
  59. data/examples/genes/chimpanzee.txt +1 -0
  60. data/examples/genes/finWhale.txt +1 -0
  61. data/examples/genes/graySeal.txt +1 -0
  62. data/examples/genes/harborSeal.txt +1 -0
  63. data/examples/genes/horse.txt +1 -0
  64. data/examples/genes/human.txt +1 -0
  65. data/examples/genes/mouse.txt +1 -0
  66. data/examples/genes/rat.txt +1 -0
  67. data/ext/Makefile +167 -0
  68. data/ext/Quartet.c +399 -0
  69. data/ext/Quartet.h +62 -0
  70. data/ext/TreeScore.c +244 -0
  71. data/ext/TreeScore.h +3 -0
  72. data/ext/config.h +65 -0
  73. data/ext/config.h.in +64 -0
  74. data/ext/extconf.rb +3 -0
  75. data/ext/lib/CompLearnLib/CLConfig.rb +241 -0
  76. data/ext/lib/CompLearnLib/CompressionObject.rb +59 -0
  77. data/ext/lib/CompLearnLib/CompressionTask.rb +99 -0
  78. data/ext/lib/CompLearnLib/DistMatrix.rb +18 -0
  79. data/ext/lib/CompLearnLib/FoundComp.rb +10 -0
  80. data/ext/lib/CompLearnLib/FoundComp.rb.in +10 -0
  81. data/ext/lib/CompLearnLib/Ncd.rb +248 -0
  82. data/ext/lib/CompLearnLib/RunEnv.rb +150 -0
  83. data/ext/lib/CompLearnLib/Task.rb +39 -0
  84. data/ext/lib/CompLearnLib/TaskMaster.rb +13 -0
  85. data/ext/lib/CompLearnLib/TaskMasterMPI.rb +112 -0
  86. data/ext/lib/CompLearnLib/TaskMasterSingle.rb +39 -0
  87. data/ext/lib/CompLearnLib/Tree.rb +300 -0
  88. data/install-sh +294 -0
  89. data/missing +336 -0
  90. data/mkinstalldirs +111 -0
  91. data/o +24 -0
  92. data/scripts/CompLearn.iss +89 -0
  93. data/scripts/CompLearn.iss.in +89 -0
  94. data/scripts/debian/changelog +6 -0
  95. data/scripts/debian/control +14 -0
  96. data/scripts/makeSetup.sh +23 -0
  97. data/scripts/makeSetup.sh.in +23 -0
  98. data/scripts/makedeb.zsh +46 -0
  99. data/scripts/makedeb.zsh.in +46 -0
  100. data/tests/alltests.rb +2 -0
  101. data/tests/bz2test.rb +516 -0
  102. data/tests/sshagent-test.rb +48 -0
  103. data/tests/tests.rb +275 -0
  104. metadata +164 -0
@@ -0,0 +1,1082 @@
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+ #! /bin/sh
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+ # Generated by configure.
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+ # Run this file to recreate the current configuration.
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+ # Compiler output produced by configure, useful for debugging
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+ # configure, is in config.log if it exists.
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+
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+ debug=false
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+ ac_cs_recheck=false
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+ ac_cs_silent=false
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+ SHELL=${CONFIG_SHELL-/bin/sh}
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+ ## --------------------- ##
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+ ## M4sh Initialization. ##
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+ ## --------------------- ##
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+
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+ # Be Bourne compatible
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+ if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
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+ emulate sh
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+ NULLCMD=:
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+ # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
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+ # is contrary to our usage. Disable this feature.
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+ alias -g '${1+"$@"}'='"$@"'
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+ elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
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+ set -o posix
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+ fi
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+ DUALCASE=1; export DUALCASE # for MKS sh
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+
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+ # Support unset when possible.
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+ if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
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+ as_unset=unset
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+ else
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+ as_unset=false
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+ fi
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+
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+
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+ # Work around bugs in pre-3.0 UWIN ksh.
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+ $as_unset ENV MAIL MAILPATH
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+ PS1='$ '
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+ PS2='> '
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+ PS4='+ '
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+
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+ # NLS nuisances.
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+ for as_var in \
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+ LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
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+ LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
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+ LC_TELEPHONE LC_TIME
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+ do
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+ if (set +x; test -z "`(eval $as_var=C; export $as_var) 2>&1`"); then
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+ eval $as_var=C; export $as_var
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+ else
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+ $as_unset $as_var
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+ fi
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+ done
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+
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+ # Required to use basename.
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+ if expr a : '\(a\)' >/dev/null 2>&1; then
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+ as_expr=expr
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+ else
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+ as_expr=false
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+ fi
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+
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+ if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
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+ as_basename=basename
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+ else
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+ as_basename=false
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+ fi
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+
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+
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+ # Name of the executable.
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+ as_me=`$as_basename "$0" ||
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+ $as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
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+ X"$0" : 'X\(//\)$' \| \
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+ X"$0" : 'X\(/\)$' \| \
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+ . : '\(.\)' 2>/dev/null ||
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+ echo X/"$0" |
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+ sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
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+ /^X\/\(\/\/\)$/{ s//\1/; q; }
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+ /^X\/\(\/\).*/{ s//\1/; q; }
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+ s/.*/./; q'`
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+
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+
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+ # PATH needs CR, and LINENO needs CR and PATH.
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+ # Avoid depending upon Character Ranges.
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+ as_cr_letters='abcdefghijklmnopqrstuvwxyz'
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+ as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
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+ as_cr_Letters=$as_cr_letters$as_cr_LETTERS
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+ as_cr_digits='0123456789'
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+ as_cr_alnum=$as_cr_Letters$as_cr_digits
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+
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+ # The user is always right.
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+ if test "${PATH_SEPARATOR+set}" != set; then
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+ echo "#! /bin/sh" >conf$$.sh
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+ echo "exit 0" >>conf$$.sh
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+ chmod +x conf$$.sh
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+ if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
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+ PATH_SEPARATOR=';'
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+ else
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+ PATH_SEPARATOR=:
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+ fi
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+ rm -f conf$$.sh
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+ fi
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+
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+
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+ as_lineno_1=$LINENO
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+ as_lineno_2=$LINENO
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+ as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
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+ test "x$as_lineno_1" != "x$as_lineno_2" &&
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+ test "x$as_lineno_3" = "x$as_lineno_2" || {
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+ # Find who we are. Look in the path if we contain no path at all
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+ # relative or not.
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+ case $0 in
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+ *[\\/]* ) as_myself=$0 ;;
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+ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
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+ for as_dir in $PATH
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+ do
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+ IFS=$as_save_IFS
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+ test -z "$as_dir" && as_dir=.
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+ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
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+ done
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+
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+ ;;
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+ esac
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+ # We did not find ourselves, most probably we were run as `sh COMMAND'
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+ # in which case we are not to be found in the path.
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+ if test "x$as_myself" = x; then
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+ as_myself=$0
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+ fi
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+ if test ! -f "$as_myself"; then
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+ { { echo "$as_me:$LINENO: error: cannot find myself; rerun with an absolute path" >&5
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+ echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2;}
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+ { (exit 1); exit 1; }; }
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+ fi
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+ case $CONFIG_SHELL in
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+ '')
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+ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
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+ for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
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+ do
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+ IFS=$as_save_IFS
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+ test -z "$as_dir" && as_dir=.
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+ for as_base in sh bash ksh sh5; do
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+ case $as_dir in
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+ /*)
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+ if ("$as_dir/$as_base" -c '
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+ as_lineno_1=$LINENO
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+ as_lineno_2=$LINENO
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+ as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
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+ test "x$as_lineno_1" != "x$as_lineno_2" &&
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+ test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
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+ $as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
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+ $as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
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+ CONFIG_SHELL=$as_dir/$as_base
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+ export CONFIG_SHELL
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+ exec "$CONFIG_SHELL" "$0" ${1+"$@"}
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+ fi;;
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+ esac
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+ done
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+ done
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+ ;;
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+ esac
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+
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+ # Create $as_me.lineno as a copy of $as_myself, but with $LINENO
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+ # uniformly replaced by the line number. The first 'sed' inserts a
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+ # line-number line before each line; the second 'sed' does the real
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+ # work. The second script uses 'N' to pair each line-number line
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+ # with the numbered line, and appends trailing '-' during
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+ # substitution so that $LINENO is not a special case at line end.
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+ # (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
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+ # second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
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+ sed '=' <$as_myself |
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+ sed '
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+ N
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+ s,$,-,
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+ : loop
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+ s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
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+ t loop
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+ s,-$,,
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+ s,^['$as_cr_digits']*\n,,
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+ ' >$as_me.lineno &&
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+ chmod +x $as_me.lineno ||
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+ { { echo "$as_me:$LINENO: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&5
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+ echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2;}
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+ { (exit 1); exit 1; }; }
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+
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+ # Don't try to exec as it changes $[0], causing all sort of problems
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+ # (the dirname of $[0] is not the place where we might find the
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+ # original and so on. Autoconf is especially sensible to this).
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+ . ./$as_me.lineno
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+ # Exit status is that of the last command.
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+ exit
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+ }
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+
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+
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+ case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
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+ *c*,-n*) ECHO_N= ECHO_C='
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+ ' ECHO_T=' ' ;;
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+ *c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
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+ *) ECHO_N= ECHO_C='\c' ECHO_T= ;;
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+ esac
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+
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+ if expr a : '\(a\)' >/dev/null 2>&1; then
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+ as_expr=expr
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+ else
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+ as_expr=false
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+ fi
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+
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+ rm -f conf$$ conf$$.exe conf$$.file
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+ echo >conf$$.file
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+ if ln -s conf$$.file conf$$ 2>/dev/null; then
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+ # We could just check for DJGPP; but this test a) works b) is more generic
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+ # and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
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+ if test -f conf$$.exe; then
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+ # Don't use ln at all; we don't have any links
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+ as_ln_s='cp -p'
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+ else
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+ as_ln_s='ln -s'
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+ fi
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+ elif ln conf$$.file conf$$ 2>/dev/null; then
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+ as_ln_s=ln
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+ else
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+ as_ln_s='cp -p'
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+ fi
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+ rm -f conf$$ conf$$.exe conf$$.file
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+
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+ if mkdir -p . 2>/dev/null; then
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+ as_mkdir_p=:
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+ else
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+ test -d ./-p && rmdir ./-p
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+ as_mkdir_p=false
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+ fi
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+
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+ as_executable_p="test -f"
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+
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+ # Sed expression to map a string onto a valid CPP name.
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+ as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
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+
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+ # Sed expression to map a string onto a valid variable name.
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+ as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
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+
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+
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+ # IFS
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+ # We need space, tab and new line, in precisely that order.
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+ as_nl='
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+ '
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+ IFS=" $as_nl"
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+
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+ # CDPATH.
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+ $as_unset CDPATH
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+
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+ exec 6>&1
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+
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+ # Open the log real soon, to keep \$[0] and so on meaningful, and to
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+ # report actual input values of CONFIG_FILES etc. instead of their
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+ # values after options handling. Logging --version etc. is OK.
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+ exec 5>>config.log
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+ {
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+ echo
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+ sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
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+ ## Running $as_me. ##
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+ _ASBOX
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+ } >&5
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+ cat >&5 <<_CSEOF
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+
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+ This file was extended by $as_me, which was
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+ generated by GNU Autoconf 2.59. Invocation command line was
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+
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+ CONFIG_FILES = $CONFIG_FILES
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+ CONFIG_HEADERS = $CONFIG_HEADERS
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+ CONFIG_LINKS = $CONFIG_LINKS
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+ CONFIG_COMMANDS = $CONFIG_COMMANDS
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+ $ $0 $@
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+
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+ _CSEOF
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+ echo "on `(hostname || uname -n) 2>/dev/null | sed 1q`" >&5
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+ echo >&5
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+ config_files=" Makefile doc/Makefile doc/man/Makefile bin/Makefile ext/lib/CompLearnLib/FoundComp.rb bin/ncd bin/ncdvector bin/ncdmatrix bin/labeltree bin/maketree bin/makesvm scripts/CompLearn.iss scripts/makeSetup.sh scripts/makedeb.zsh"
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+ config_headers=" ext/config.h"
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+ config_commands=" ext/Makefile"
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+
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+ ac_cs_usage="\
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+ \`$as_me' instantiates files from templates according to the
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+ current configuration.
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+
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+ Usage: $0 [OPTIONS] [FILE]...
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+
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+ -h, --help print this help, then exit
285
+ -V, --version print version number, then exit
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+ -q, --quiet do not print progress messages
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+ -d, --debug don't remove temporary files
288
+ --recheck update $as_me by reconfiguring in the same conditions
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+ --file=FILE[:TEMPLATE]
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+ instantiate the configuration file FILE
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+ --header=FILE[:TEMPLATE]
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+ instantiate the configuration header FILE
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+
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+ Configuration files:
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+ $config_files
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+
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+ Configuration headers:
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+ $config_headers
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+
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+ Configuration commands:
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+ $config_commands
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+
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+ Report bugs to <bug-autoconf@gnu.org>."
304
+ ac_cs_version="\
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+ config.status
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+ configured by ./configure, generated by GNU Autoconf 2.59,
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+ with options \"\"
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+
309
+ Copyright (C) 2003 Free Software Foundation, Inc.
310
+ This config.status script is free software; the Free Software Foundation
311
+ gives unlimited permission to copy, distribute and modify it."
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+ srcdir=.
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+ INSTALL="/usr/bin/install -c"
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+ # If no file are specified by the user, then we need to provide default
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+ # value. By we need to know if files were specified by the user.
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+ ac_need_defaults=:
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+ while test $# != 0
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+ do
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+ case $1 in
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+ --*=*)
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+ ac_option=`expr "x$1" : 'x\([^=]*\)='`
322
+ ac_optarg=`expr "x$1" : 'x[^=]*=\(.*\)'`
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+ ac_shift=:
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+ ;;
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+ -*)
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+ ac_option=$1
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+ ac_optarg=$2
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+ ac_shift=shift
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+ ;;
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+ *) # This is not an option, so the user has probably given explicit
331
+ # arguments.
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+ ac_option=$1
333
+ ac_need_defaults=false;;
334
+ esac
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+
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+ case $ac_option in
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+ # Handling of the options.
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+ -recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
339
+ ac_cs_recheck=: ;;
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+ --version | --vers* | -V )
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+ echo "$ac_cs_version"; exit 0 ;;
342
+ --he | --h)
343
+ # Conflict between --help and --header
344
+ { { echo "$as_me:$LINENO: error: ambiguous option: $1
345
+ Try \`$0 --help' for more information." >&5
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+ echo "$as_me: error: ambiguous option: $1
347
+ Try \`$0 --help' for more information." >&2;}
348
+ { (exit 1); exit 1; }; };;
349
+ --help | --hel | -h )
350
+ echo "$ac_cs_usage"; exit 0 ;;
351
+ --debug | --d* | -d )
352
+ debug=: ;;
353
+ --file | --fil | --fi | --f )
354
+ $ac_shift
355
+ CONFIG_FILES="$CONFIG_FILES $ac_optarg"
356
+ ac_need_defaults=false;;
357
+ --header | --heade | --head | --hea )
358
+ $ac_shift
359
+ CONFIG_HEADERS="$CONFIG_HEADERS $ac_optarg"
360
+ ac_need_defaults=false;;
361
+ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
362
+ | -silent | --silent | --silen | --sile | --sil | --si | --s)
363
+ ac_cs_silent=: ;;
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+
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+ # This is an error.
366
+ -*) { { echo "$as_me:$LINENO: error: unrecognized option: $1
367
+ Try \`$0 --help' for more information." >&5
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+ echo "$as_me: error: unrecognized option: $1
369
+ Try \`$0 --help' for more information." >&2;}
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+ { (exit 1); exit 1; }; } ;;
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+
372
+ *) ac_config_targets="$ac_config_targets $1" ;;
373
+
374
+ esac
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+ shift
376
+ done
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+
378
+ ac_configure_extra_args=
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+
380
+ if $ac_cs_silent; then
381
+ exec 6>/dev/null
382
+ ac_configure_extra_args="$ac_configure_extra_args --silent"
383
+ fi
384
+
385
+ if $ac_cs_recheck; then
386
+ echo "running /bin/sh ./configure " $ac_configure_extra_args " --no-create --no-recursion" >&6
387
+ exec /bin/sh ./configure $ac_configure_extra_args --no-create --no-recursion
388
+ fi
389
+
390
+ #
391
+ # INIT-COMMANDS section.
392
+ #
393
+
394
+ RUBYBIN=/usr/bin/ruby1.8
395
+
396
+ for ac_config_target in $ac_config_targets
397
+ do
398
+ case "$ac_config_target" in
399
+ # Handling of arguments.
400
+ "Makefile" ) CONFIG_FILES="$CONFIG_FILES Makefile" ;;
401
+ "doc/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/Makefile" ;;
402
+ "doc/man/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/man/Makefile" ;;
403
+ "bin/Makefile" ) CONFIG_FILES="$CONFIG_FILES bin/Makefile" ;;
404
+ "ext/lib/CompLearnLib/FoundComp.rb" ) CONFIG_FILES="$CONFIG_FILES ext/lib/CompLearnLib/FoundComp.rb" ;;
405
+ "bin/ncd" ) CONFIG_FILES="$CONFIG_FILES bin/ncd" ;;
406
+ "bin/ncdvector" ) CONFIG_FILES="$CONFIG_FILES bin/ncdvector" ;;
407
+ "bin/ncdmatrix" ) CONFIG_FILES="$CONFIG_FILES bin/ncdmatrix" ;;
408
+ "bin/labeltree" ) CONFIG_FILES="$CONFIG_FILES bin/labeltree" ;;
409
+ "bin/maketree" ) CONFIG_FILES="$CONFIG_FILES bin/maketree" ;;
410
+ "bin/makesvm" ) CONFIG_FILES="$CONFIG_FILES bin/makesvm" ;;
411
+ "scripts/CompLearn.iss" ) CONFIG_FILES="$CONFIG_FILES scripts/CompLearn.iss" ;;
412
+ "scripts/makeSetup.sh" ) CONFIG_FILES="$CONFIG_FILES scripts/makeSetup.sh" ;;
413
+ "scripts/makedeb.zsh" ) CONFIG_FILES="$CONFIG_FILES scripts/makedeb.zsh" ;;
414
+ "ext/Makefile" ) CONFIG_COMMANDS="$CONFIG_COMMANDS ext/Makefile" ;;
415
+ "ext/config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS ext/config.h" ;;
416
+ *) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
417
+ echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
418
+ { (exit 1); exit 1; }; };;
419
+ esac
420
+ done
421
+
422
+ # If the user did not use the arguments to specify the items to instantiate,
423
+ # then the envvar interface is used. Set only those that are not.
424
+ # We use the long form for the default assignment because of an extremely
425
+ # bizarre bug on SunOS 4.1.3.
426
+ if $ac_need_defaults; then
427
+ test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
428
+ test "${CONFIG_HEADERS+set}" = set || CONFIG_HEADERS=$config_headers
429
+ test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
430
+ fi
431
+
432
+ # Have a temporary directory for convenience. Make it in the build tree
433
+ # simply because there is no reason to put it here, and in addition,
434
+ # creating and moving files from /tmp can sometimes cause problems.
435
+ # Create a temporary directory, and hook for its removal unless debugging.
436
+ $debug ||
437
+ {
438
+ trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
439
+ trap '{ (exit 1); exit 1; }' 1 2 13 15
440
+ }
441
+
442
+ # Create a (secure) tmp directory for tmp files.
443
+
444
+ {
445
+ tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
446
+ test -n "$tmp" && test -d "$tmp"
447
+ } ||
448
+ {
449
+ tmp=./confstat$$-$RANDOM
450
+ (umask 077 && mkdir $tmp)
451
+ } ||
452
+ {
453
+ echo "$me: cannot create a temporary directory in ." >&2
454
+ { (exit 1); exit 1; }
455
+ }
456
+
457
+
458
+ #
459
+ # CONFIG_FILES section.
460
+ #
461
+
462
+ # No need to generate the scripts if there are no CONFIG_FILES.
463
+ # This happens for instance when ./config.status config.h
464
+ if test -n "$CONFIG_FILES"; then
465
+ # Protect against being on the right side of a sed subst in config.status.
466
+ sed 's/,@/@@/; s/@,/@@/; s/,;t t$/@;t t/; /@;t t$/s/[\\&,]/\\&/g;
467
+ s/@@/,@/; s/@@/@,/; s/@;t t$/,;t t/' >$tmp/subs.sed <<\CEOF
468
+ s,@SHELL@,/bin/sh,;t t
469
+ s,@PATH_SEPARATOR@,:,;t t
470
+ s,@PACKAGE_NAME@,,;t t
471
+ s,@PACKAGE_TARNAME@,,;t t
472
+ s,@PACKAGE_VERSION@,,;t t
473
+ s,@PACKAGE_STRING@,,;t t
474
+ s,@PACKAGE_BUGREPORT@,,;t t
475
+ s,@exec_prefix@,${prefix},;t t
476
+ s,@prefix@,/usr/local,;t t
477
+ s,@program_transform_name@,s,x,x,,;t t
478
+ s,@bindir@,${exec_prefix}/bin,;t t
479
+ s,@sbindir@,${exec_prefix}/sbin,;t t
480
+ s,@libexecdir@,${exec_prefix}/libexec,;t t
481
+ s,@datadir@,${prefix}/share,;t t
482
+ s,@sysconfdir@,${prefix}/etc,;t t
483
+ s,@sharedstatedir@,${prefix}/com,;t t
484
+ s,@localstatedir@,${prefix}/var,;t t
485
+ s,@libdir@,${exec_prefix}/lib,;t t
486
+ s,@includedir@,${prefix}/include,;t t
487
+ s,@oldincludedir@,/usr/include,;t t
488
+ s,@infodir@,${prefix}/info,;t t
489
+ s,@mandir@,${prefix}/man,;t t
490
+ s,@build_alias@,,;t t
491
+ s,@host_alias@,,;t t
492
+ s,@target_alias@,,;t t
493
+ s,@DEFS@,-DHAVE_CONFIG_H,;t t
494
+ s,@ECHO_C@,,;t t
495
+ s,@ECHO_N@,-n,;t t
496
+ s,@ECHO_T@,,;t t
497
+ s,@LIBS@,,;t t
498
+ s,@SET_MAKE@,,;t t
499
+ s,@TOPDIR@,/home/cilibrar/src/complearngem/complearn-0.6.2,;t t
500
+ s,@INSTALL_PROGRAM@,${INSTALL},;t t
501
+ s,@INSTALL_SCRIPT@,${INSTALL},;t t
502
+ s,@INSTALL_DATA@,${INSTALL} -m 644,;t t
503
+ s,@PACKAGE@,complearn,;t t
504
+ s,@VERSION@,0.6.2,;t t
505
+ s,@ACLOCAL@,aclocal,;t t
506
+ s,@AUTOCONF@,autoconf,;t t
507
+ s,@AUTOMAKE@,automake,;t t
508
+ s,@AUTOHEADER@,autoheader,;t t
509
+ s,@MAKEINFO@,makeinfo,;t t
510
+ s,@RANLIB@,ranlib,;t t
511
+ s,@ac_ct_RANLIB@,ranlib,;t t
512
+ s,@WINBUILDDIR@,c:\build,;t t
513
+ s,@CC@,gcc,;t t
514
+ s,@CFLAGS@,-g -O2,;t t
515
+ s,@LDFLAGS@,,;t t
516
+ s,@CPPFLAGS@,,;t t
517
+ s,@ac_ct_CC@,gcc,;t t
518
+ s,@EXEEXT@,,;t t
519
+ s,@OBJEXT@,o,;t t
520
+ s,@RUBYBIN@,/usr/bin/ruby1.8,;t t
521
+ s,@FOUNDBZIP2@,true,;t t
522
+ s,@FOUNDGZIP@,true,;t t
523
+ s,@CPP@,gcc -E,;t t
524
+ s,@EGREP@,grep -E,;t t
525
+ s,@LIBOBJS@,,;t t
526
+ s,@LTLIBOBJS@,,;t t
527
+ CEOF
528
+
529
+ # Split the substitutions into bite-sized pieces for seds with
530
+ # small command number limits, like on Digital OSF/1 and HP-UX.
531
+ ac_max_sed_lines=48
532
+ ac_sed_frag=1 # Number of current file.
533
+ ac_beg=1 # First line for current file.
534
+ ac_end=$ac_max_sed_lines # Line after last line for current file.
535
+ ac_more_lines=:
536
+ ac_sed_cmds=
537
+ while $ac_more_lines; do
538
+ if test $ac_beg -gt 1; then
539
+ sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
540
+ else
541
+ sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
542
+ fi
543
+ if test ! -s $tmp/subs.frag; then
544
+ ac_more_lines=false
545
+ else
546
+ # The purpose of the label and of the branching condition is to
547
+ # speed up the sed processing (if there are no `@' at all, there
548
+ # is no need to browse any of the substitutions).
549
+ # These are the two extra sed commands mentioned above.
550
+ (echo ':t
551
+ /@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
552
+ if test -z "$ac_sed_cmds"; then
553
+ ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
554
+ else
555
+ ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
556
+ fi
557
+ ac_sed_frag=`expr $ac_sed_frag + 1`
558
+ ac_beg=$ac_end
559
+ ac_end=`expr $ac_end + $ac_max_sed_lines`
560
+ fi
561
+ done
562
+ if test -z "$ac_sed_cmds"; then
563
+ ac_sed_cmds=cat
564
+ fi
565
+ fi # test -n "$CONFIG_FILES"
566
+
567
+ for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
568
+ # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
569
+ case $ac_file in
570
+ - | *:- | *:-:* ) # input from stdin
571
+ cat >$tmp/stdin
572
+ ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
573
+ ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
574
+ *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
575
+ ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
576
+ * ) ac_file_in=$ac_file.in ;;
577
+ esac
578
+
579
+ # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
580
+ ac_dir=`(dirname "$ac_file") 2>/dev/null ||
581
+ $as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
582
+ X"$ac_file" : 'X\(//\)[^/]' \| \
583
+ X"$ac_file" : 'X\(//\)$' \| \
584
+ X"$ac_file" : 'X\(/\)' \| \
585
+ . : '\(.\)' 2>/dev/null ||
586
+ echo X"$ac_file" |
587
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
588
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
589
+ /^X\(\/\/\)$/{ s//\1/; q; }
590
+ /^X\(\/\).*/{ s//\1/; q; }
591
+ s/.*/./; q'`
592
+ { if $as_mkdir_p; then
593
+ mkdir -p "$ac_dir"
594
+ else
595
+ as_dir="$ac_dir"
596
+ as_dirs=
597
+ while test ! -d "$as_dir"; do
598
+ as_dirs="$as_dir $as_dirs"
599
+ as_dir=`(dirname "$as_dir") 2>/dev/null ||
600
+ $as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
601
+ X"$as_dir" : 'X\(//\)[^/]' \| \
602
+ X"$as_dir" : 'X\(//\)$' \| \
603
+ X"$as_dir" : 'X\(/\)' \| \
604
+ . : '\(.\)' 2>/dev/null ||
605
+ echo X"$as_dir" |
606
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
607
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
608
+ /^X\(\/\/\)$/{ s//\1/; q; }
609
+ /^X\(\/\).*/{ s//\1/; q; }
610
+ s/.*/./; q'`
611
+ done
612
+ test ! -n "$as_dirs" || mkdir $as_dirs
613
+ fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
614
+ echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
615
+ { (exit 1); exit 1; }; }; }
616
+
617
+ ac_builddir=.
618
+
619
+ if test "$ac_dir" != .; then
620
+ ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
621
+ # A "../" for each directory in $ac_dir_suffix.
622
+ ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
623
+ else
624
+ ac_dir_suffix= ac_top_builddir=
625
+ fi
626
+
627
+ case $srcdir in
628
+ .) # No --srcdir option. We are building in place.
629
+ ac_srcdir=.
630
+ if test -z "$ac_top_builddir"; then
631
+ ac_top_srcdir=.
632
+ else
633
+ ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
634
+ fi ;;
635
+ [\\/]* | ?:[\\/]* ) # Absolute path.
636
+ ac_srcdir=$srcdir$ac_dir_suffix;
637
+ ac_top_srcdir=$srcdir ;;
638
+ *) # Relative path.
639
+ ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
640
+ ac_top_srcdir=$ac_top_builddir$srcdir ;;
641
+ esac
642
+
643
+ # Do not use `cd foo && pwd` to compute absolute paths, because
644
+ # the directories may not exist.
645
+ case `pwd` in
646
+ .) ac_abs_builddir="$ac_dir";;
647
+ *)
648
+ case "$ac_dir" in
649
+ .) ac_abs_builddir=`pwd`;;
650
+ [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
651
+ *) ac_abs_builddir=`pwd`/"$ac_dir";;
652
+ esac;;
653
+ esac
654
+ case $ac_abs_builddir in
655
+ .) ac_abs_top_builddir=${ac_top_builddir}.;;
656
+ *)
657
+ case ${ac_top_builddir}. in
658
+ .) ac_abs_top_builddir=$ac_abs_builddir;;
659
+ [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
660
+ *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
661
+ esac;;
662
+ esac
663
+ case $ac_abs_builddir in
664
+ .) ac_abs_srcdir=$ac_srcdir;;
665
+ *)
666
+ case $ac_srcdir in
667
+ .) ac_abs_srcdir=$ac_abs_builddir;;
668
+ [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
669
+ *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
670
+ esac;;
671
+ esac
672
+ case $ac_abs_builddir in
673
+ .) ac_abs_top_srcdir=$ac_top_srcdir;;
674
+ *)
675
+ case $ac_top_srcdir in
676
+ .) ac_abs_top_srcdir=$ac_abs_builddir;;
677
+ [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
678
+ *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
679
+ esac;;
680
+ esac
681
+
682
+
683
+ case $INSTALL in
684
+ [\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
685
+ *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
686
+ esac
687
+
688
+ # Let's still pretend it is `configure' which instantiates (i.e., don't
689
+ # use $as_me), people would be surprised to read:
690
+ # /* config.h. Generated by config.status. */
691
+ if test x"$ac_file" = x-; then
692
+ configure_input=
693
+ else
694
+ configure_input="$ac_file. "
695
+ fi
696
+ configure_input=$configure_input"Generated from `echo $ac_file_in |
697
+ sed 's,.*/,,'` by configure."
698
+
699
+ # First look for the input files in the build tree, otherwise in the
700
+ # src tree.
701
+ ac_file_inputs=`IFS=:
702
+ for f in $ac_file_in; do
703
+ case $f in
704
+ -) echo $tmp/stdin ;;
705
+ [\\/$]*)
706
+ # Absolute (can't be DOS-style, as IFS=:)
707
+ test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
708
+ echo "$as_me: error: cannot find input file: $f" >&2;}
709
+ { (exit 1); exit 1; }; }
710
+ echo "$f";;
711
+ *) # Relative
712
+ if test -f "$f"; then
713
+ # Build tree
714
+ echo "$f"
715
+ elif test -f "$srcdir/$f"; then
716
+ # Source tree
717
+ echo "$srcdir/$f"
718
+ else
719
+ # /dev/null tree
720
+ { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
721
+ echo "$as_me: error: cannot find input file: $f" >&2;}
722
+ { (exit 1); exit 1; }; }
723
+ fi;;
724
+ esac
725
+ done` || { (exit 1); exit 1; }
726
+
727
+ if test x"$ac_file" != x-; then
728
+ { echo "$as_me:$LINENO: creating $ac_file" >&5
729
+ echo "$as_me: creating $ac_file" >&6;}
730
+ rm -f "$ac_file"
731
+ fi
732
+ sed "/^[ ]*VPATH[ ]*=/{
733
+ s/:*\$(srcdir):*/:/;
734
+ s/:*\${srcdir}:*/:/;
735
+ s/:*@srcdir@:*/:/;
736
+ s/^\([^=]*=[ ]*\):*/\1/;
737
+ s/:*$//;
738
+ s/^[^=]*=[ ]*$//;
739
+ }
740
+
741
+ :t
742
+ /@[a-zA-Z_][a-zA-Z_0-9]*@/!b
743
+ s,@configure_input@,$configure_input,;t t
744
+ s,@srcdir@,$ac_srcdir,;t t
745
+ s,@abs_srcdir@,$ac_abs_srcdir,;t t
746
+ s,@top_srcdir@,$ac_top_srcdir,;t t
747
+ s,@abs_top_srcdir@,$ac_abs_top_srcdir,;t t
748
+ s,@builddir@,$ac_builddir,;t t
749
+ s,@abs_builddir@,$ac_abs_builddir,;t t
750
+ s,@top_builddir@,$ac_top_builddir,;t t
751
+ s,@abs_top_builddir@,$ac_abs_top_builddir,;t t
752
+ s,@INSTALL@,$ac_INSTALL,;t t
753
+ " $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
754
+ rm -f $tmp/stdin
755
+ if test x"$ac_file" != x-; then
756
+ mv $tmp/out $ac_file
757
+ else
758
+ cat $tmp/out
759
+ rm -f $tmp/out
760
+ fi
761
+
762
+ # Run the commands associated with the file.
763
+ case $ac_file in
764
+ bin/ncd ) chmod +x bin/ncd ;;
765
+ bin/ncdvector ) chmod +x bin/ncdvector ;;
766
+ bin/ncdmatrix ) chmod +x bin/ncdmatrix ;;
767
+ bin/labeltree ) chmod +x bin/labeltree ;;
768
+ bin/maketree ) chmod +x bin/maketree ;;
769
+ bin/makesvm ) chmod +x bin/makesvm ;;
770
+ scripts/makeSetup.sh ) chmod +x scripts/makeSetup.sh ;;
771
+ scripts/makedeb.zsh ) chmod +x scripts/makedeb.zsh ;;
772
+ esac
773
+ done
774
+
775
+ #
776
+ # CONFIG_HEADER section.
777
+ #
778
+
779
+ # These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
780
+ # NAME is the cpp macro being defined and VALUE is the value it is being given.
781
+ #
782
+ # ac_d sets the value in "#define NAME VALUE" lines.
783
+ ac_dA='s,^\([ ]*\)#\([ ]*define[ ][ ]*\)'
784
+ ac_dB='[ ].*$,\1#\2'
785
+ ac_dC=' '
786
+ ac_dD=',;t'
787
+ # ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
788
+ ac_uA='s,^\([ ]*\)#\([ ]*\)undef\([ ][ ]*\)'
789
+ ac_uB='$,\1#\2define\3'
790
+ ac_uC=' '
791
+ ac_uD=',;t'
792
+
793
+ for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
794
+ # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
795
+ case $ac_file in
796
+ - | *:- | *:-:* ) # input from stdin
797
+ cat >$tmp/stdin
798
+ ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
799
+ ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
800
+ *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
801
+ ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
802
+ * ) ac_file_in=$ac_file.in ;;
803
+ esac
804
+
805
+ test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5
806
+ echo "$as_me: creating $ac_file" >&6;}
807
+
808
+ # First look for the input files in the build tree, otherwise in the
809
+ # src tree.
810
+ ac_file_inputs=`IFS=:
811
+ for f in $ac_file_in; do
812
+ case $f in
813
+ -) echo $tmp/stdin ;;
814
+ [\\/$]*)
815
+ # Absolute (can't be DOS-style, as IFS=:)
816
+ test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
817
+ echo "$as_me: error: cannot find input file: $f" >&2;}
818
+ { (exit 1); exit 1; }; }
819
+ # Do quote $f, to prevent DOS paths from being IFS'd.
820
+ echo "$f";;
821
+ *) # Relative
822
+ if test -f "$f"; then
823
+ # Build tree
824
+ echo "$f"
825
+ elif test -f "$srcdir/$f"; then
826
+ # Source tree
827
+ echo "$srcdir/$f"
828
+ else
829
+ # /dev/null tree
830
+ { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
831
+ echo "$as_me: error: cannot find input file: $f" >&2;}
832
+ { (exit 1); exit 1; }; }
833
+ fi;;
834
+ esac
835
+ done` || { (exit 1); exit 1; }
836
+ # Remove the trailing spaces.
837
+ sed 's/[ ]*$//' $ac_file_inputs >$tmp/in
838
+
839
+ # Handle all the #define templates only if necessary.
840
+ if grep "^[ ]*#[ ]*define" $tmp/in >/dev/null; then
841
+ # If there are no defines, we may have an empty if/fi
842
+ :
843
+ cat >$tmp/defines.sed <<CEOF
844
+ /^[ ]*#[ ]*define/!b
845
+ t clr
846
+ : clr
847
+ ${ac_dA}PACKAGE_NAME${ac_dB}PACKAGE_NAME${ac_dC}""${ac_dD}
848
+ ${ac_dA}PACKAGE_TARNAME${ac_dB}PACKAGE_TARNAME${ac_dC}""${ac_dD}
849
+ ${ac_dA}PACKAGE_VERSION${ac_dB}PACKAGE_VERSION${ac_dC}""${ac_dD}
850
+ ${ac_dA}PACKAGE_STRING${ac_dB}PACKAGE_STRING${ac_dC}""${ac_dD}
851
+ ${ac_dA}PACKAGE_BUGREPORT${ac_dB}PACKAGE_BUGREPORT${ac_dC}""${ac_dD}
852
+ ${ac_dA}PACKAGE${ac_dB}PACKAGE${ac_dC}"complearn"${ac_dD}
853
+ ${ac_dA}VERSION${ac_dB}VERSION${ac_dC}"0.6.2"${ac_dD}
854
+ ${ac_dA}STDC_HEADERS${ac_dB}STDC_HEADERS${ac_dC}1${ac_dD}
855
+ ${ac_dA}HAVE_SYS_TYPES_H${ac_dB}HAVE_SYS_TYPES_H${ac_dC}1${ac_dD}
856
+ ${ac_dA}HAVE_SYS_STAT_H${ac_dB}HAVE_SYS_STAT_H${ac_dC}1${ac_dD}
857
+ ${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
858
+ ${ac_dA}HAVE_STRING_H${ac_dB}HAVE_STRING_H${ac_dC}1${ac_dD}
859
+ ${ac_dA}HAVE_MEMORY_H${ac_dB}HAVE_MEMORY_H${ac_dC}1${ac_dD}
860
+ ${ac_dA}HAVE_STRINGS_H${ac_dB}HAVE_STRINGS_H${ac_dC}1${ac_dD}
861
+ ${ac_dA}HAVE_INTTYPES_H${ac_dB}HAVE_INTTYPES_H${ac_dC}1${ac_dD}
862
+ ${ac_dA}HAVE_STDINT_H${ac_dB}HAVE_STDINT_H${ac_dC}1${ac_dD}
863
+ ${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
864
+ ${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
865
+ ${ac_dA}HAVE_SYS_TIME_H${ac_dB}HAVE_SYS_TIME_H${ac_dC}1${ac_dD}
866
+ ${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
867
+ CEOF
868
+ sed -f $tmp/defines.sed $tmp/in >$tmp/out
869
+ rm -f $tmp/in
870
+ mv $tmp/out $tmp/in
871
+
872
+ fi # grep
873
+
874
+ # Handle all the #undef templates
875
+ cat >$tmp/undefs.sed <<CEOF
876
+ /^[ ]*#[ ]*undef/!b
877
+ t clr
878
+ : clr
879
+ ${ac_uA}PACKAGE_NAME${ac_uB}PACKAGE_NAME${ac_uC}""${ac_uD}
880
+ ${ac_uA}PACKAGE_TARNAME${ac_uB}PACKAGE_TARNAME${ac_uC}""${ac_uD}
881
+ ${ac_uA}PACKAGE_VERSION${ac_uB}PACKAGE_VERSION${ac_uC}""${ac_uD}
882
+ ${ac_uA}PACKAGE_STRING${ac_uB}PACKAGE_STRING${ac_uC}""${ac_uD}
883
+ ${ac_uA}PACKAGE_BUGREPORT${ac_uB}PACKAGE_BUGREPORT${ac_uC}""${ac_uD}
884
+ ${ac_uA}PACKAGE${ac_uB}PACKAGE${ac_uC}"complearn"${ac_uD}
885
+ ${ac_uA}VERSION${ac_uB}VERSION${ac_uC}"0.6.2"${ac_uD}
886
+ ${ac_uA}STDC_HEADERS${ac_uB}STDC_HEADERS${ac_uC}1${ac_uD}
887
+ ${ac_uA}HAVE_SYS_TYPES_H${ac_uB}HAVE_SYS_TYPES_H${ac_uC}1${ac_uD}
888
+ ${ac_uA}HAVE_SYS_STAT_H${ac_uB}HAVE_SYS_STAT_H${ac_uC}1${ac_uD}
889
+ ${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
890
+ ${ac_uA}HAVE_STRING_H${ac_uB}HAVE_STRING_H${ac_uC}1${ac_uD}
891
+ ${ac_uA}HAVE_MEMORY_H${ac_uB}HAVE_MEMORY_H${ac_uC}1${ac_uD}
892
+ ${ac_uA}HAVE_STRINGS_H${ac_uB}HAVE_STRINGS_H${ac_uC}1${ac_uD}
893
+ ${ac_uA}HAVE_INTTYPES_H${ac_uB}HAVE_INTTYPES_H${ac_uC}1${ac_uD}
894
+ ${ac_uA}HAVE_STDINT_H${ac_uB}HAVE_STDINT_H${ac_uC}1${ac_uD}
895
+ ${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
896
+ ${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
897
+ ${ac_uA}HAVE_SYS_TIME_H${ac_uB}HAVE_SYS_TIME_H${ac_uC}1${ac_uD}
898
+ ${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
899
+ s,^[ ]*#[ ]*undef[ ][ ]*[a-zA-Z_][a-zA-Z_0-9]*,/* & */,
900
+ CEOF
901
+ sed -f $tmp/undefs.sed $tmp/in >$tmp/out
902
+ rm -f $tmp/in
903
+ mv $tmp/out $tmp/in
904
+
905
+ # Let's still pretend it is `configure' which instantiates (i.e., don't
906
+ # use $as_me), people would be surprised to read:
907
+ # /* config.h. Generated by config.status. */
908
+ if test x"$ac_file" = x-; then
909
+ echo "/* Generated by configure. */" >$tmp/config.h
910
+ else
911
+ echo "/* $ac_file. Generated by configure. */" >$tmp/config.h
912
+ fi
913
+ cat $tmp/in >>$tmp/config.h
914
+ rm -f $tmp/in
915
+ if test x"$ac_file" != x-; then
916
+ if diff $ac_file $tmp/config.h >/dev/null 2>&1; then
917
+ { echo "$as_me:$LINENO: $ac_file is unchanged" >&5
918
+ echo "$as_me: $ac_file is unchanged" >&6;}
919
+ else
920
+ ac_dir=`(dirname "$ac_file") 2>/dev/null ||
921
+ $as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
922
+ X"$ac_file" : 'X\(//\)[^/]' \| \
923
+ X"$ac_file" : 'X\(//\)$' \| \
924
+ X"$ac_file" : 'X\(/\)' \| \
925
+ . : '\(.\)' 2>/dev/null ||
926
+ echo X"$ac_file" |
927
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
928
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
929
+ /^X\(\/\/\)$/{ s//\1/; q; }
930
+ /^X\(\/\).*/{ s//\1/; q; }
931
+ s/.*/./; q'`
932
+ { if $as_mkdir_p; then
933
+ mkdir -p "$ac_dir"
934
+ else
935
+ as_dir="$ac_dir"
936
+ as_dirs=
937
+ while test ! -d "$as_dir"; do
938
+ as_dirs="$as_dir $as_dirs"
939
+ as_dir=`(dirname "$as_dir") 2>/dev/null ||
940
+ $as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
941
+ X"$as_dir" : 'X\(//\)[^/]' \| \
942
+ X"$as_dir" : 'X\(//\)$' \| \
943
+ X"$as_dir" : 'X\(/\)' \| \
944
+ . : '\(.\)' 2>/dev/null ||
945
+ echo X"$as_dir" |
946
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
947
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
948
+ /^X\(\/\/\)$/{ s//\1/; q; }
949
+ /^X\(\/\).*/{ s//\1/; q; }
950
+ s/.*/./; q'`
951
+ done
952
+ test ! -n "$as_dirs" || mkdir $as_dirs
953
+ fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
954
+ echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
955
+ { (exit 1); exit 1; }; }; }
956
+
957
+ rm -f $ac_file
958
+ mv $tmp/config.h $ac_file
959
+ fi
960
+ else
961
+ cat $tmp/config.h
962
+ rm -f $tmp/config.h
963
+ fi
964
+ done
965
+
966
+ #
967
+ # CONFIG_COMMANDS section.
968
+ #
969
+ for ac_file in : $CONFIG_COMMANDS; do test "x$ac_file" = x: && continue
970
+ ac_dest=`echo "$ac_file" | sed 's,:.*,,'`
971
+ ac_source=`echo "$ac_file" | sed 's,[^:]*:,,'`
972
+ ac_dir=`(dirname "$ac_dest") 2>/dev/null ||
973
+ $as_expr X"$ac_dest" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
974
+ X"$ac_dest" : 'X\(//\)[^/]' \| \
975
+ X"$ac_dest" : 'X\(//\)$' \| \
976
+ X"$ac_dest" : 'X\(/\)' \| \
977
+ . : '\(.\)' 2>/dev/null ||
978
+ echo X"$ac_dest" |
979
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
980
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
981
+ /^X\(\/\/\)$/{ s//\1/; q; }
982
+ /^X\(\/\).*/{ s//\1/; q; }
983
+ s/.*/./; q'`
984
+ { if $as_mkdir_p; then
985
+ mkdir -p "$ac_dir"
986
+ else
987
+ as_dir="$ac_dir"
988
+ as_dirs=
989
+ while test ! -d "$as_dir"; do
990
+ as_dirs="$as_dir $as_dirs"
991
+ as_dir=`(dirname "$as_dir") 2>/dev/null ||
992
+ $as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
993
+ X"$as_dir" : 'X\(//\)[^/]' \| \
994
+ X"$as_dir" : 'X\(//\)$' \| \
995
+ X"$as_dir" : 'X\(/\)' \| \
996
+ . : '\(.\)' 2>/dev/null ||
997
+ echo X"$as_dir" |
998
+ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
999
+ /^X\(\/\/\)[^/].*/{ s//\1/; q; }
1000
+ /^X\(\/\/\)$/{ s//\1/; q; }
1001
+ /^X\(\/\).*/{ s//\1/; q; }
1002
+ s/.*/./; q'`
1003
+ done
1004
+ test ! -n "$as_dirs" || mkdir $as_dirs
1005
+ fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
1006
+ echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
1007
+ { (exit 1); exit 1; }; }; }
1008
+
1009
+ ac_builddir=.
1010
+
1011
+ if test "$ac_dir" != .; then
1012
+ ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
1013
+ # A "../" for each directory in $ac_dir_suffix.
1014
+ ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
1015
+ else
1016
+ ac_dir_suffix= ac_top_builddir=
1017
+ fi
1018
+
1019
+ case $srcdir in
1020
+ .) # No --srcdir option. We are building in place.
1021
+ ac_srcdir=.
1022
+ if test -z "$ac_top_builddir"; then
1023
+ ac_top_srcdir=.
1024
+ else
1025
+ ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
1026
+ fi ;;
1027
+ [\\/]* | ?:[\\/]* ) # Absolute path.
1028
+ ac_srcdir=$srcdir$ac_dir_suffix;
1029
+ ac_top_srcdir=$srcdir ;;
1030
+ *) # Relative path.
1031
+ ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
1032
+ ac_top_srcdir=$ac_top_builddir$srcdir ;;
1033
+ esac
1034
+
1035
+ # Do not use `cd foo && pwd` to compute absolute paths, because
1036
+ # the directories may not exist.
1037
+ case `pwd` in
1038
+ .) ac_abs_builddir="$ac_dir";;
1039
+ *)
1040
+ case "$ac_dir" in
1041
+ .) ac_abs_builddir=`pwd`;;
1042
+ [\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
1043
+ *) ac_abs_builddir=`pwd`/"$ac_dir";;
1044
+ esac;;
1045
+ esac
1046
+ case $ac_abs_builddir in
1047
+ .) ac_abs_top_builddir=${ac_top_builddir}.;;
1048
+ *)
1049
+ case ${ac_top_builddir}. in
1050
+ .) ac_abs_top_builddir=$ac_abs_builddir;;
1051
+ [\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
1052
+ *) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
1053
+ esac;;
1054
+ esac
1055
+ case $ac_abs_builddir in
1056
+ .) ac_abs_srcdir=$ac_srcdir;;
1057
+ *)
1058
+ case $ac_srcdir in
1059
+ .) ac_abs_srcdir=$ac_abs_builddir;;
1060
+ [\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
1061
+ *) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
1062
+ esac;;
1063
+ esac
1064
+ case $ac_abs_builddir in
1065
+ .) ac_abs_top_srcdir=$ac_top_srcdir;;
1066
+ *)
1067
+ case $ac_top_srcdir in
1068
+ .) ac_abs_top_srcdir=$ac_abs_builddir;;
1069
+ [\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
1070
+ *) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
1071
+ esac;;
1072
+ esac
1073
+
1074
+
1075
+ { echo "$as_me:$LINENO: executing $ac_dest commands" >&5
1076
+ echo "$as_me: executing $ac_dest commands" >&6;}
1077
+ case $ac_dest in
1078
+ ext/Makefile ) cd $srcdir/ext ; $RUBYBIN extconf.rb ; echo 'distdir:' >> Makefile ;;
1079
+ esac
1080
+ done
1081
+
1082
+ { (exit 0); exit 0; }