complearn 0.6.2
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- data/AUTHORS +13 -0
- data/COPYING +340 -0
- data/ChangeLog +0 -0
- data/INSTALL +231 -0
- data/Makefile +352 -0
- data/Makefile.am +76 -0
- data/Makefile.in +352 -0
- data/NEWS +7 -0
- data/README +0 -0
- data/aclocal.m4 +104 -0
- data/bin/Makefile +209 -0
- data/bin/Makefile.am +8 -0
- data/bin/Makefile.in +209 -0
- data/bin/labeltree +68 -0
- data/bin/labeltree.in +68 -0
- data/bin/makesvm +70 -0
- data/bin/makesvm.in +70 -0
- data/bin/maketree +98 -0
- data/bin/maketree.in +98 -0
- data/bin/ncd +43 -0
- data/bin/ncd.in +43 -0
- data/bin/ncdmatrix +54 -0
- data/bin/ncdmatrix.in +54 -0
- data/bin/ncdvector +50 -0
- data/bin/ncdvector.in +50 -0
- data/complearn-0.6.2.gem +0 -0
- data/complearn.gemspec +57 -0
- data/config.log +597 -0
- data/config.status +1082 -0
- data/configure +4922 -0
- data/configure.ac +91 -0
- data/confstat5FpLBf/config.h +65 -0
- data/confstat5FpLBf/subs-1.sed +50 -0
- data/confstat5FpLBf/subs-2.sed +13 -0
- data/confstat5FpLBf/subs.frag +0 -0
- data/confstat5FpLBf/subs.sed +59 -0
- data/confstat5FpLBf/undefs.sed +24 -0
- data/doc/FAQ.txt +67 -0
- data/doc/Makefile +286 -0
- data/doc/Makefile.am +11 -0
- data/doc/Makefile.in +286 -0
- data/doc/devguide.txt +15 -0
- data/doc/example.complearnrc +14 -0
- data/doc/examples.txt +35 -0
- data/doc/man/Makefile +255 -0
- data/doc/man/Makefile.am +11 -0
- data/doc/man/Makefile.in +255 -0
- data/doc/man/complearn.5 +91 -0
- data/doc/man/labeltree.1 +35 -0
- data/doc/man/makesvm.1 +60 -0
- data/doc/man/maketree.1 +58 -0
- data/doc/man/ncd.1 +51 -0
- data/doc/man/ncdmatrix.1 +40 -0
- data/doc/man/ncdvector.1 +42 -0
- data/doc/readme.txt +101 -0
- data/doc/userguide.txt +46 -0
- data/examples/genes/blueWhale.txt +1 -0
- data/examples/genes/cat.txt +1 -0
- data/examples/genes/chimpanzee.txt +1 -0
- data/examples/genes/finWhale.txt +1 -0
- data/examples/genes/graySeal.txt +1 -0
- data/examples/genes/harborSeal.txt +1 -0
- data/examples/genes/horse.txt +1 -0
- data/examples/genes/human.txt +1 -0
- data/examples/genes/mouse.txt +1 -0
- data/examples/genes/rat.txt +1 -0
- data/ext/Makefile +167 -0
- data/ext/Quartet.c +399 -0
- data/ext/Quartet.h +62 -0
- data/ext/TreeScore.c +244 -0
- data/ext/TreeScore.h +3 -0
- data/ext/config.h +65 -0
- data/ext/config.h.in +64 -0
- data/ext/extconf.rb +3 -0
- data/ext/lib/CompLearnLib/CLConfig.rb +241 -0
- data/ext/lib/CompLearnLib/CompressionObject.rb +59 -0
- data/ext/lib/CompLearnLib/CompressionTask.rb +99 -0
- data/ext/lib/CompLearnLib/DistMatrix.rb +18 -0
- data/ext/lib/CompLearnLib/FoundComp.rb +10 -0
- data/ext/lib/CompLearnLib/FoundComp.rb.in +10 -0
- data/ext/lib/CompLearnLib/Ncd.rb +248 -0
- data/ext/lib/CompLearnLib/RunEnv.rb +150 -0
- data/ext/lib/CompLearnLib/Task.rb +39 -0
- data/ext/lib/CompLearnLib/TaskMaster.rb +13 -0
- data/ext/lib/CompLearnLib/TaskMasterMPI.rb +112 -0
- data/ext/lib/CompLearnLib/TaskMasterSingle.rb +39 -0
- data/ext/lib/CompLearnLib/Tree.rb +300 -0
- data/install-sh +294 -0
- data/missing +336 -0
- data/mkinstalldirs +111 -0
- data/o +24 -0
- data/scripts/CompLearn.iss +89 -0
- data/scripts/CompLearn.iss.in +89 -0
- data/scripts/debian/changelog +6 -0
- data/scripts/debian/control +14 -0
- data/scripts/makeSetup.sh +23 -0
- data/scripts/makeSetup.sh.in +23 -0
- data/scripts/makedeb.zsh +46 -0
- data/scripts/makedeb.zsh.in +46 -0
- data/tests/alltests.rb +2 -0
- data/tests/bz2test.rb +516 -0
- data/tests/sshagent-test.rb +48 -0
- data/tests/tests.rb +275 -0
- metadata +164 -0
data/config.status
ADDED
@@ -0,0 +1,1082 @@
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#! /bin/sh
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# Generated by configure.
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# Run this file to recreate the current configuration.
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# Compiler output produced by configure, useful for debugging
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# configure, is in config.log if it exists.
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debug=false
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ac_cs_recheck=false
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ac_cs_silent=false
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SHELL=${CONFIG_SHELL-/bin/sh}
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## --------------------- ##
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## M4sh Initialization. ##
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## --------------------- ##
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# Be Bourne compatible
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if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
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emulate sh
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NULLCMD=:
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# Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
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# is contrary to our usage. Disable this feature.
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alias -g '${1+"$@"}'='"$@"'
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elif test -n "${BASH_VERSION+set}" && (set -o posix) >/dev/null 2>&1; then
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set -o posix
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fi
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DUALCASE=1; export DUALCASE # for MKS sh
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# Support unset when possible.
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if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
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as_unset=unset
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else
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as_unset=false
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fi
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# Work around bugs in pre-3.0 UWIN ksh.
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$as_unset ENV MAIL MAILPATH
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PS1='$ '
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PS2='> '
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PS4='+ '
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# NLS nuisances.
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for as_var in \
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LANG LANGUAGE LC_ADDRESS LC_ALL LC_COLLATE LC_CTYPE LC_IDENTIFICATION \
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LC_MEASUREMENT LC_MESSAGES LC_MONETARY LC_NAME LC_NUMERIC LC_PAPER \
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LC_TELEPHONE LC_TIME
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do
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if (set +x; test -z "`(eval $as_var=C; export $as_var) 2>&1`"); then
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eval $as_var=C; export $as_var
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else
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$as_unset $as_var
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fi
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done
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# Required to use basename.
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if expr a : '\(a\)' >/dev/null 2>&1; then
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as_expr=expr
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else
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as_expr=false
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fi
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if (basename /) >/dev/null 2>&1 && test "X`basename / 2>&1`" = "X/"; then
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as_basename=basename
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else
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as_basename=false
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fi
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# Name of the executable.
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as_me=`$as_basename "$0" ||
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$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
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X"$0" : 'X\(//\)$' \| \
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X"$0" : 'X\(/\)$' \| \
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. : '\(.\)' 2>/dev/null ||
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echo X/"$0" |
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sed '/^.*\/\([^/][^/]*\)\/*$/{ s//\1/; q; }
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/^X\/\(\/\/\)$/{ s//\1/; q; }
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/^X\/\(\/\).*/{ s//\1/; q; }
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s/.*/./; q'`
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+
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# PATH needs CR, and LINENO needs CR and PATH.
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# Avoid depending upon Character Ranges.
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as_cr_letters='abcdefghijklmnopqrstuvwxyz'
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as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
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85
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as_cr_Letters=$as_cr_letters$as_cr_LETTERS
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86
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as_cr_digits='0123456789'
|
87
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as_cr_alnum=$as_cr_Letters$as_cr_digits
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+
|
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# The user is always right.
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if test "${PATH_SEPARATOR+set}" != set; then
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echo "#! /bin/sh" >conf$$.sh
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echo "exit 0" >>conf$$.sh
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chmod +x conf$$.sh
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if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
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PATH_SEPARATOR=';'
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else
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PATH_SEPARATOR=:
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fi
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rm -f conf$$.sh
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fi
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101
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as_lineno_1=$LINENO
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as_lineno_2=$LINENO
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as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
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test "x$as_lineno_1" != "x$as_lineno_2" &&
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test "x$as_lineno_3" = "x$as_lineno_2" || {
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# Find who we are. Look in the path if we contain no path at all
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# relative or not.
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case $0 in
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*[\\/]* ) as_myself=$0 ;;
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*) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
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for as_dir in $PATH
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do
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IFS=$as_save_IFS
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test -z "$as_dir" && as_dir=.
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test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
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done
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;;
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esac
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# We did not find ourselves, most probably we were run as `sh COMMAND'
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# in which case we are not to be found in the path.
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if test "x$as_myself" = x; then
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as_myself=$0
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fi
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if test ! -f "$as_myself"; then
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{ { echo "$as_me:$LINENO: error: cannot find myself; rerun with an absolute path" >&5
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echo "$as_me: error: cannot find myself; rerun with an absolute path" >&2;}
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{ (exit 1); exit 1; }; }
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fi
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case $CONFIG_SHELL in
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'')
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as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
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for as_dir in /bin$PATH_SEPARATOR/usr/bin$PATH_SEPARATOR$PATH
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do
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IFS=$as_save_IFS
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test -z "$as_dir" && as_dir=.
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139
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for as_base in sh bash ksh sh5; do
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case $as_dir in
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/*)
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if ("$as_dir/$as_base" -c '
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as_lineno_1=$LINENO
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as_lineno_2=$LINENO
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as_lineno_3=`(expr $as_lineno_1 + 1) 2>/dev/null`
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test "x$as_lineno_1" != "x$as_lineno_2" &&
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test "x$as_lineno_3" = "x$as_lineno_2" ') 2>/dev/null; then
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$as_unset BASH_ENV || test "${BASH_ENV+set}" != set || { BASH_ENV=; export BASH_ENV; }
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$as_unset ENV || test "${ENV+set}" != set || { ENV=; export ENV; }
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CONFIG_SHELL=$as_dir/$as_base
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export CONFIG_SHELL
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exec "$CONFIG_SHELL" "$0" ${1+"$@"}
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fi;;
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esac
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done
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done
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;;
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esac
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+
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# Create $as_me.lineno as a copy of $as_myself, but with $LINENO
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# uniformly replaced by the line number. The first 'sed' inserts a
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162
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# line-number line before each line; the second 'sed' does the real
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# work. The second script uses 'N' to pair each line-number line
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# with the numbered line, and appends trailing '-' during
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# substitution so that $LINENO is not a special case at line end.
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# (Raja R Harinath suggested sed '=', and Paul Eggert wrote the
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167
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# second 'sed' script. Blame Lee E. McMahon for sed's syntax. :-)
|
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sed '=' <$as_myself |
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sed '
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N
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s,$,-,
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: loop
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s,^\(['$as_cr_digits']*\)\(.*\)[$]LINENO\([^'$as_cr_alnum'_]\),\1\2\1\3,
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t loop
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s,-$,,
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s,^['$as_cr_digits']*\n,,
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' >$as_me.lineno &&
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chmod +x $as_me.lineno ||
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{ { echo "$as_me:$LINENO: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&5
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echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2;}
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181
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{ (exit 1); exit 1; }; }
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182
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+
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183
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# Don't try to exec as it changes $[0], causing all sort of problems
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184
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# (the dirname of $[0] is not the place where we might find the
|
185
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# original and so on. Autoconf is especially sensible to this).
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186
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. ./$as_me.lineno
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# Exit status is that of the last command.
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exit
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}
|
190
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|
191
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|
192
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case `echo "testing\c"; echo 1,2,3`,`echo -n testing; echo 1,2,3` in
|
193
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*c*,-n*) ECHO_N= ECHO_C='
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194
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' ECHO_T=' ' ;;
|
195
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*c*,* ) ECHO_N=-n ECHO_C= ECHO_T= ;;
|
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*) ECHO_N= ECHO_C='\c' ECHO_T= ;;
|
197
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esac
|
198
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+
|
199
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if expr a : '\(a\)' >/dev/null 2>&1; then
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as_expr=expr
|
201
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else
|
202
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as_expr=false
|
203
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fi
|
204
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+
|
205
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rm -f conf$$ conf$$.exe conf$$.file
|
206
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echo >conf$$.file
|
207
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if ln -s conf$$.file conf$$ 2>/dev/null; then
|
208
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# We could just check for DJGPP; but this test a) works b) is more generic
|
209
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# and c) will remain valid once DJGPP supports symlinks (DJGPP 2.04).
|
210
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if test -f conf$$.exe; then
|
211
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# Don't use ln at all; we don't have any links
|
212
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as_ln_s='cp -p'
|
213
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else
|
214
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as_ln_s='ln -s'
|
215
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+
fi
|
216
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elif ln conf$$.file conf$$ 2>/dev/null; then
|
217
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as_ln_s=ln
|
218
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else
|
219
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as_ln_s='cp -p'
|
220
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+
fi
|
221
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rm -f conf$$ conf$$.exe conf$$.file
|
222
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+
|
223
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+
if mkdir -p . 2>/dev/null; then
|
224
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as_mkdir_p=:
|
225
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else
|
226
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test -d ./-p && rmdir ./-p
|
227
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as_mkdir_p=false
|
228
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+
fi
|
229
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+
|
230
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as_executable_p="test -f"
|
231
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+
|
232
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# Sed expression to map a string onto a valid CPP name.
|
233
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as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
|
234
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+
|
235
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# Sed expression to map a string onto a valid variable name.
|
236
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as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
|
237
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+
|
238
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+
|
239
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+
# IFS
|
240
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+
# We need space, tab and new line, in precisely that order.
|
241
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+
as_nl='
|
242
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+
'
|
243
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+
IFS=" $as_nl"
|
244
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+
|
245
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+
# CDPATH.
|
246
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+
$as_unset CDPATH
|
247
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+
|
248
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exec 6>&1
|
249
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+
|
250
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+
# Open the log real soon, to keep \$[0] and so on meaningful, and to
|
251
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+
# report actual input values of CONFIG_FILES etc. instead of their
|
252
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+
# values after options handling. Logging --version etc. is OK.
|
253
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+
exec 5>>config.log
|
254
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+
{
|
255
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+
echo
|
256
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sed 'h;s/./-/g;s/^.../## /;s/...$/ ##/;p;x;p;x' <<_ASBOX
|
257
|
+
## Running $as_me. ##
|
258
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+
_ASBOX
|
259
|
+
} >&5
|
260
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+
cat >&5 <<_CSEOF
|
261
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+
|
262
|
+
This file was extended by $as_me, which was
|
263
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+
generated by GNU Autoconf 2.59. Invocation command line was
|
264
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+
|
265
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+
CONFIG_FILES = $CONFIG_FILES
|
266
|
+
CONFIG_HEADERS = $CONFIG_HEADERS
|
267
|
+
CONFIG_LINKS = $CONFIG_LINKS
|
268
|
+
CONFIG_COMMANDS = $CONFIG_COMMANDS
|
269
|
+
$ $0 $@
|
270
|
+
|
271
|
+
_CSEOF
|
272
|
+
echo "on `(hostname || uname -n) 2>/dev/null | sed 1q`" >&5
|
273
|
+
echo >&5
|
274
|
+
config_files=" Makefile doc/Makefile doc/man/Makefile bin/Makefile ext/lib/CompLearnLib/FoundComp.rb bin/ncd bin/ncdvector bin/ncdmatrix bin/labeltree bin/maketree bin/makesvm scripts/CompLearn.iss scripts/makeSetup.sh scripts/makedeb.zsh"
|
275
|
+
config_headers=" ext/config.h"
|
276
|
+
config_commands=" ext/Makefile"
|
277
|
+
|
278
|
+
ac_cs_usage="\
|
279
|
+
\`$as_me' instantiates files from templates according to the
|
280
|
+
current configuration.
|
281
|
+
|
282
|
+
Usage: $0 [OPTIONS] [FILE]...
|
283
|
+
|
284
|
+
-h, --help print this help, then exit
|
285
|
+
-V, --version print version number, then exit
|
286
|
+
-q, --quiet do not print progress messages
|
287
|
+
-d, --debug don't remove temporary files
|
288
|
+
--recheck update $as_me by reconfiguring in the same conditions
|
289
|
+
--file=FILE[:TEMPLATE]
|
290
|
+
instantiate the configuration file FILE
|
291
|
+
--header=FILE[:TEMPLATE]
|
292
|
+
instantiate the configuration header FILE
|
293
|
+
|
294
|
+
Configuration files:
|
295
|
+
$config_files
|
296
|
+
|
297
|
+
Configuration headers:
|
298
|
+
$config_headers
|
299
|
+
|
300
|
+
Configuration commands:
|
301
|
+
$config_commands
|
302
|
+
|
303
|
+
Report bugs to <bug-autoconf@gnu.org>."
|
304
|
+
ac_cs_version="\
|
305
|
+
config.status
|
306
|
+
configured by ./configure, generated by GNU Autoconf 2.59,
|
307
|
+
with options \"\"
|
308
|
+
|
309
|
+
Copyright (C) 2003 Free Software Foundation, Inc.
|
310
|
+
This config.status script is free software; the Free Software Foundation
|
311
|
+
gives unlimited permission to copy, distribute and modify it."
|
312
|
+
srcdir=.
|
313
|
+
INSTALL="/usr/bin/install -c"
|
314
|
+
# If no file are specified by the user, then we need to provide default
|
315
|
+
# value. By we need to know if files were specified by the user.
|
316
|
+
ac_need_defaults=:
|
317
|
+
while test $# != 0
|
318
|
+
do
|
319
|
+
case $1 in
|
320
|
+
--*=*)
|
321
|
+
ac_option=`expr "x$1" : 'x\([^=]*\)='`
|
322
|
+
ac_optarg=`expr "x$1" : 'x[^=]*=\(.*\)'`
|
323
|
+
ac_shift=:
|
324
|
+
;;
|
325
|
+
-*)
|
326
|
+
ac_option=$1
|
327
|
+
ac_optarg=$2
|
328
|
+
ac_shift=shift
|
329
|
+
;;
|
330
|
+
*) # This is not an option, so the user has probably given explicit
|
331
|
+
# arguments.
|
332
|
+
ac_option=$1
|
333
|
+
ac_need_defaults=false;;
|
334
|
+
esac
|
335
|
+
|
336
|
+
case $ac_option in
|
337
|
+
# Handling of the options.
|
338
|
+
-recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
|
339
|
+
ac_cs_recheck=: ;;
|
340
|
+
--version | --vers* | -V )
|
341
|
+
echo "$ac_cs_version"; exit 0 ;;
|
342
|
+
--he | --h)
|
343
|
+
# Conflict between --help and --header
|
344
|
+
{ { echo "$as_me:$LINENO: error: ambiguous option: $1
|
345
|
+
Try \`$0 --help' for more information." >&5
|
346
|
+
echo "$as_me: error: ambiguous option: $1
|
347
|
+
Try \`$0 --help' for more information." >&2;}
|
348
|
+
{ (exit 1); exit 1; }; };;
|
349
|
+
--help | --hel | -h )
|
350
|
+
echo "$ac_cs_usage"; exit 0 ;;
|
351
|
+
--debug | --d* | -d )
|
352
|
+
debug=: ;;
|
353
|
+
--file | --fil | --fi | --f )
|
354
|
+
$ac_shift
|
355
|
+
CONFIG_FILES="$CONFIG_FILES $ac_optarg"
|
356
|
+
ac_need_defaults=false;;
|
357
|
+
--header | --heade | --head | --hea )
|
358
|
+
$ac_shift
|
359
|
+
CONFIG_HEADERS="$CONFIG_HEADERS $ac_optarg"
|
360
|
+
ac_need_defaults=false;;
|
361
|
+
-q | -quiet | --quiet | --quie | --qui | --qu | --q \
|
362
|
+
| -silent | --silent | --silen | --sile | --sil | --si | --s)
|
363
|
+
ac_cs_silent=: ;;
|
364
|
+
|
365
|
+
# This is an error.
|
366
|
+
-*) { { echo "$as_me:$LINENO: error: unrecognized option: $1
|
367
|
+
Try \`$0 --help' for more information." >&5
|
368
|
+
echo "$as_me: error: unrecognized option: $1
|
369
|
+
Try \`$0 --help' for more information." >&2;}
|
370
|
+
{ (exit 1); exit 1; }; } ;;
|
371
|
+
|
372
|
+
*) ac_config_targets="$ac_config_targets $1" ;;
|
373
|
+
|
374
|
+
esac
|
375
|
+
shift
|
376
|
+
done
|
377
|
+
|
378
|
+
ac_configure_extra_args=
|
379
|
+
|
380
|
+
if $ac_cs_silent; then
|
381
|
+
exec 6>/dev/null
|
382
|
+
ac_configure_extra_args="$ac_configure_extra_args --silent"
|
383
|
+
fi
|
384
|
+
|
385
|
+
if $ac_cs_recheck; then
|
386
|
+
echo "running /bin/sh ./configure " $ac_configure_extra_args " --no-create --no-recursion" >&6
|
387
|
+
exec /bin/sh ./configure $ac_configure_extra_args --no-create --no-recursion
|
388
|
+
fi
|
389
|
+
|
390
|
+
#
|
391
|
+
# INIT-COMMANDS section.
|
392
|
+
#
|
393
|
+
|
394
|
+
RUBYBIN=/usr/bin/ruby1.8
|
395
|
+
|
396
|
+
for ac_config_target in $ac_config_targets
|
397
|
+
do
|
398
|
+
case "$ac_config_target" in
|
399
|
+
# Handling of arguments.
|
400
|
+
"Makefile" ) CONFIG_FILES="$CONFIG_FILES Makefile" ;;
|
401
|
+
"doc/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/Makefile" ;;
|
402
|
+
"doc/man/Makefile" ) CONFIG_FILES="$CONFIG_FILES doc/man/Makefile" ;;
|
403
|
+
"bin/Makefile" ) CONFIG_FILES="$CONFIG_FILES bin/Makefile" ;;
|
404
|
+
"ext/lib/CompLearnLib/FoundComp.rb" ) CONFIG_FILES="$CONFIG_FILES ext/lib/CompLearnLib/FoundComp.rb" ;;
|
405
|
+
"bin/ncd" ) CONFIG_FILES="$CONFIG_FILES bin/ncd" ;;
|
406
|
+
"bin/ncdvector" ) CONFIG_FILES="$CONFIG_FILES bin/ncdvector" ;;
|
407
|
+
"bin/ncdmatrix" ) CONFIG_FILES="$CONFIG_FILES bin/ncdmatrix" ;;
|
408
|
+
"bin/labeltree" ) CONFIG_FILES="$CONFIG_FILES bin/labeltree" ;;
|
409
|
+
"bin/maketree" ) CONFIG_FILES="$CONFIG_FILES bin/maketree" ;;
|
410
|
+
"bin/makesvm" ) CONFIG_FILES="$CONFIG_FILES bin/makesvm" ;;
|
411
|
+
"scripts/CompLearn.iss" ) CONFIG_FILES="$CONFIG_FILES scripts/CompLearn.iss" ;;
|
412
|
+
"scripts/makeSetup.sh" ) CONFIG_FILES="$CONFIG_FILES scripts/makeSetup.sh" ;;
|
413
|
+
"scripts/makedeb.zsh" ) CONFIG_FILES="$CONFIG_FILES scripts/makedeb.zsh" ;;
|
414
|
+
"ext/Makefile" ) CONFIG_COMMANDS="$CONFIG_COMMANDS ext/Makefile" ;;
|
415
|
+
"ext/config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS ext/config.h" ;;
|
416
|
+
*) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
|
417
|
+
echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
|
418
|
+
{ (exit 1); exit 1; }; };;
|
419
|
+
esac
|
420
|
+
done
|
421
|
+
|
422
|
+
# If the user did not use the arguments to specify the items to instantiate,
|
423
|
+
# then the envvar interface is used. Set only those that are not.
|
424
|
+
# We use the long form for the default assignment because of an extremely
|
425
|
+
# bizarre bug on SunOS 4.1.3.
|
426
|
+
if $ac_need_defaults; then
|
427
|
+
test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
|
428
|
+
test "${CONFIG_HEADERS+set}" = set || CONFIG_HEADERS=$config_headers
|
429
|
+
test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
|
430
|
+
fi
|
431
|
+
|
432
|
+
# Have a temporary directory for convenience. Make it in the build tree
|
433
|
+
# simply because there is no reason to put it here, and in addition,
|
434
|
+
# creating and moving files from /tmp can sometimes cause problems.
|
435
|
+
# Create a temporary directory, and hook for its removal unless debugging.
|
436
|
+
$debug ||
|
437
|
+
{
|
438
|
+
trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
|
439
|
+
trap '{ (exit 1); exit 1; }' 1 2 13 15
|
440
|
+
}
|
441
|
+
|
442
|
+
# Create a (secure) tmp directory for tmp files.
|
443
|
+
|
444
|
+
{
|
445
|
+
tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
|
446
|
+
test -n "$tmp" && test -d "$tmp"
|
447
|
+
} ||
|
448
|
+
{
|
449
|
+
tmp=./confstat$$-$RANDOM
|
450
|
+
(umask 077 && mkdir $tmp)
|
451
|
+
} ||
|
452
|
+
{
|
453
|
+
echo "$me: cannot create a temporary directory in ." >&2
|
454
|
+
{ (exit 1); exit 1; }
|
455
|
+
}
|
456
|
+
|
457
|
+
|
458
|
+
#
|
459
|
+
# CONFIG_FILES section.
|
460
|
+
#
|
461
|
+
|
462
|
+
# No need to generate the scripts if there are no CONFIG_FILES.
|
463
|
+
# This happens for instance when ./config.status config.h
|
464
|
+
if test -n "$CONFIG_FILES"; then
|
465
|
+
# Protect against being on the right side of a sed subst in config.status.
|
466
|
+
sed 's/,@/@@/; s/@,/@@/; s/,;t t$/@;t t/; /@;t t$/s/[\\&,]/\\&/g;
|
467
|
+
s/@@/,@/; s/@@/@,/; s/@;t t$/,;t t/' >$tmp/subs.sed <<\CEOF
|
468
|
+
s,@SHELL@,/bin/sh,;t t
|
469
|
+
s,@PATH_SEPARATOR@,:,;t t
|
470
|
+
s,@PACKAGE_NAME@,,;t t
|
471
|
+
s,@PACKAGE_TARNAME@,,;t t
|
472
|
+
s,@PACKAGE_VERSION@,,;t t
|
473
|
+
s,@PACKAGE_STRING@,,;t t
|
474
|
+
s,@PACKAGE_BUGREPORT@,,;t t
|
475
|
+
s,@exec_prefix@,${prefix},;t t
|
476
|
+
s,@prefix@,/usr/local,;t t
|
477
|
+
s,@program_transform_name@,s,x,x,,;t t
|
478
|
+
s,@bindir@,${exec_prefix}/bin,;t t
|
479
|
+
s,@sbindir@,${exec_prefix}/sbin,;t t
|
480
|
+
s,@libexecdir@,${exec_prefix}/libexec,;t t
|
481
|
+
s,@datadir@,${prefix}/share,;t t
|
482
|
+
s,@sysconfdir@,${prefix}/etc,;t t
|
483
|
+
s,@sharedstatedir@,${prefix}/com,;t t
|
484
|
+
s,@localstatedir@,${prefix}/var,;t t
|
485
|
+
s,@libdir@,${exec_prefix}/lib,;t t
|
486
|
+
s,@includedir@,${prefix}/include,;t t
|
487
|
+
s,@oldincludedir@,/usr/include,;t t
|
488
|
+
s,@infodir@,${prefix}/info,;t t
|
489
|
+
s,@mandir@,${prefix}/man,;t t
|
490
|
+
s,@build_alias@,,;t t
|
491
|
+
s,@host_alias@,,;t t
|
492
|
+
s,@target_alias@,,;t t
|
493
|
+
s,@DEFS@,-DHAVE_CONFIG_H,;t t
|
494
|
+
s,@ECHO_C@,,;t t
|
495
|
+
s,@ECHO_N@,-n,;t t
|
496
|
+
s,@ECHO_T@,,;t t
|
497
|
+
s,@LIBS@,,;t t
|
498
|
+
s,@SET_MAKE@,,;t t
|
499
|
+
s,@TOPDIR@,/home/cilibrar/src/complearngem/complearn-0.6.2,;t t
|
500
|
+
s,@INSTALL_PROGRAM@,${INSTALL},;t t
|
501
|
+
s,@INSTALL_SCRIPT@,${INSTALL},;t t
|
502
|
+
s,@INSTALL_DATA@,${INSTALL} -m 644,;t t
|
503
|
+
s,@PACKAGE@,complearn,;t t
|
504
|
+
s,@VERSION@,0.6.2,;t t
|
505
|
+
s,@ACLOCAL@,aclocal,;t t
|
506
|
+
s,@AUTOCONF@,autoconf,;t t
|
507
|
+
s,@AUTOMAKE@,automake,;t t
|
508
|
+
s,@AUTOHEADER@,autoheader,;t t
|
509
|
+
s,@MAKEINFO@,makeinfo,;t t
|
510
|
+
s,@RANLIB@,ranlib,;t t
|
511
|
+
s,@ac_ct_RANLIB@,ranlib,;t t
|
512
|
+
s,@WINBUILDDIR@,c:\build,;t t
|
513
|
+
s,@CC@,gcc,;t t
|
514
|
+
s,@CFLAGS@,-g -O2,;t t
|
515
|
+
s,@LDFLAGS@,,;t t
|
516
|
+
s,@CPPFLAGS@,,;t t
|
517
|
+
s,@ac_ct_CC@,gcc,;t t
|
518
|
+
s,@EXEEXT@,,;t t
|
519
|
+
s,@OBJEXT@,o,;t t
|
520
|
+
s,@RUBYBIN@,/usr/bin/ruby1.8,;t t
|
521
|
+
s,@FOUNDBZIP2@,true,;t t
|
522
|
+
s,@FOUNDGZIP@,true,;t t
|
523
|
+
s,@CPP@,gcc -E,;t t
|
524
|
+
s,@EGREP@,grep -E,;t t
|
525
|
+
s,@LIBOBJS@,,;t t
|
526
|
+
s,@LTLIBOBJS@,,;t t
|
527
|
+
CEOF
|
528
|
+
|
529
|
+
# Split the substitutions into bite-sized pieces for seds with
|
530
|
+
# small command number limits, like on Digital OSF/1 and HP-UX.
|
531
|
+
ac_max_sed_lines=48
|
532
|
+
ac_sed_frag=1 # Number of current file.
|
533
|
+
ac_beg=1 # First line for current file.
|
534
|
+
ac_end=$ac_max_sed_lines # Line after last line for current file.
|
535
|
+
ac_more_lines=:
|
536
|
+
ac_sed_cmds=
|
537
|
+
while $ac_more_lines; do
|
538
|
+
if test $ac_beg -gt 1; then
|
539
|
+
sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
|
540
|
+
else
|
541
|
+
sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
|
542
|
+
fi
|
543
|
+
if test ! -s $tmp/subs.frag; then
|
544
|
+
ac_more_lines=false
|
545
|
+
else
|
546
|
+
# The purpose of the label and of the branching condition is to
|
547
|
+
# speed up the sed processing (if there are no `@' at all, there
|
548
|
+
# is no need to browse any of the substitutions).
|
549
|
+
# These are the two extra sed commands mentioned above.
|
550
|
+
(echo ':t
|
551
|
+
/@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
|
552
|
+
if test -z "$ac_sed_cmds"; then
|
553
|
+
ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
|
554
|
+
else
|
555
|
+
ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
|
556
|
+
fi
|
557
|
+
ac_sed_frag=`expr $ac_sed_frag + 1`
|
558
|
+
ac_beg=$ac_end
|
559
|
+
ac_end=`expr $ac_end + $ac_max_sed_lines`
|
560
|
+
fi
|
561
|
+
done
|
562
|
+
if test -z "$ac_sed_cmds"; then
|
563
|
+
ac_sed_cmds=cat
|
564
|
+
fi
|
565
|
+
fi # test -n "$CONFIG_FILES"
|
566
|
+
|
567
|
+
for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
|
568
|
+
# Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
|
569
|
+
case $ac_file in
|
570
|
+
- | *:- | *:-:* ) # input from stdin
|
571
|
+
cat >$tmp/stdin
|
572
|
+
ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
|
573
|
+
ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
|
574
|
+
*:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
|
575
|
+
ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
|
576
|
+
* ) ac_file_in=$ac_file.in ;;
|
577
|
+
esac
|
578
|
+
|
579
|
+
# Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
|
580
|
+
ac_dir=`(dirname "$ac_file") 2>/dev/null ||
|
581
|
+
$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
582
|
+
X"$ac_file" : 'X\(//\)[^/]' \| \
|
583
|
+
X"$ac_file" : 'X\(//\)$' \| \
|
584
|
+
X"$ac_file" : 'X\(/\)' \| \
|
585
|
+
. : '\(.\)' 2>/dev/null ||
|
586
|
+
echo X"$ac_file" |
|
587
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
588
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
589
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
590
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
591
|
+
s/.*/./; q'`
|
592
|
+
{ if $as_mkdir_p; then
|
593
|
+
mkdir -p "$ac_dir"
|
594
|
+
else
|
595
|
+
as_dir="$ac_dir"
|
596
|
+
as_dirs=
|
597
|
+
while test ! -d "$as_dir"; do
|
598
|
+
as_dirs="$as_dir $as_dirs"
|
599
|
+
as_dir=`(dirname "$as_dir") 2>/dev/null ||
|
600
|
+
$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
601
|
+
X"$as_dir" : 'X\(//\)[^/]' \| \
|
602
|
+
X"$as_dir" : 'X\(//\)$' \| \
|
603
|
+
X"$as_dir" : 'X\(/\)' \| \
|
604
|
+
. : '\(.\)' 2>/dev/null ||
|
605
|
+
echo X"$as_dir" |
|
606
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
607
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
608
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
609
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
610
|
+
s/.*/./; q'`
|
611
|
+
done
|
612
|
+
test ! -n "$as_dirs" || mkdir $as_dirs
|
613
|
+
fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
|
614
|
+
echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
|
615
|
+
{ (exit 1); exit 1; }; }; }
|
616
|
+
|
617
|
+
ac_builddir=.
|
618
|
+
|
619
|
+
if test "$ac_dir" != .; then
|
620
|
+
ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
|
621
|
+
# A "../" for each directory in $ac_dir_suffix.
|
622
|
+
ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
|
623
|
+
else
|
624
|
+
ac_dir_suffix= ac_top_builddir=
|
625
|
+
fi
|
626
|
+
|
627
|
+
case $srcdir in
|
628
|
+
.) # No --srcdir option. We are building in place.
|
629
|
+
ac_srcdir=.
|
630
|
+
if test -z "$ac_top_builddir"; then
|
631
|
+
ac_top_srcdir=.
|
632
|
+
else
|
633
|
+
ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
|
634
|
+
fi ;;
|
635
|
+
[\\/]* | ?:[\\/]* ) # Absolute path.
|
636
|
+
ac_srcdir=$srcdir$ac_dir_suffix;
|
637
|
+
ac_top_srcdir=$srcdir ;;
|
638
|
+
*) # Relative path.
|
639
|
+
ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
|
640
|
+
ac_top_srcdir=$ac_top_builddir$srcdir ;;
|
641
|
+
esac
|
642
|
+
|
643
|
+
# Do not use `cd foo && pwd` to compute absolute paths, because
|
644
|
+
# the directories may not exist.
|
645
|
+
case `pwd` in
|
646
|
+
.) ac_abs_builddir="$ac_dir";;
|
647
|
+
*)
|
648
|
+
case "$ac_dir" in
|
649
|
+
.) ac_abs_builddir=`pwd`;;
|
650
|
+
[\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
|
651
|
+
*) ac_abs_builddir=`pwd`/"$ac_dir";;
|
652
|
+
esac;;
|
653
|
+
esac
|
654
|
+
case $ac_abs_builddir in
|
655
|
+
.) ac_abs_top_builddir=${ac_top_builddir}.;;
|
656
|
+
*)
|
657
|
+
case ${ac_top_builddir}. in
|
658
|
+
.) ac_abs_top_builddir=$ac_abs_builddir;;
|
659
|
+
[\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
|
660
|
+
*) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
|
661
|
+
esac;;
|
662
|
+
esac
|
663
|
+
case $ac_abs_builddir in
|
664
|
+
.) ac_abs_srcdir=$ac_srcdir;;
|
665
|
+
*)
|
666
|
+
case $ac_srcdir in
|
667
|
+
.) ac_abs_srcdir=$ac_abs_builddir;;
|
668
|
+
[\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
|
669
|
+
*) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
|
670
|
+
esac;;
|
671
|
+
esac
|
672
|
+
case $ac_abs_builddir in
|
673
|
+
.) ac_abs_top_srcdir=$ac_top_srcdir;;
|
674
|
+
*)
|
675
|
+
case $ac_top_srcdir in
|
676
|
+
.) ac_abs_top_srcdir=$ac_abs_builddir;;
|
677
|
+
[\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
|
678
|
+
*) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
|
679
|
+
esac;;
|
680
|
+
esac
|
681
|
+
|
682
|
+
|
683
|
+
case $INSTALL in
|
684
|
+
[\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
|
685
|
+
*) ac_INSTALL=$ac_top_builddir$INSTALL ;;
|
686
|
+
esac
|
687
|
+
|
688
|
+
# Let's still pretend it is `configure' which instantiates (i.e., don't
|
689
|
+
# use $as_me), people would be surprised to read:
|
690
|
+
# /* config.h. Generated by config.status. */
|
691
|
+
if test x"$ac_file" = x-; then
|
692
|
+
configure_input=
|
693
|
+
else
|
694
|
+
configure_input="$ac_file. "
|
695
|
+
fi
|
696
|
+
configure_input=$configure_input"Generated from `echo $ac_file_in |
|
697
|
+
sed 's,.*/,,'` by configure."
|
698
|
+
|
699
|
+
# First look for the input files in the build tree, otherwise in the
|
700
|
+
# src tree.
|
701
|
+
ac_file_inputs=`IFS=:
|
702
|
+
for f in $ac_file_in; do
|
703
|
+
case $f in
|
704
|
+
-) echo $tmp/stdin ;;
|
705
|
+
[\\/$]*)
|
706
|
+
# Absolute (can't be DOS-style, as IFS=:)
|
707
|
+
test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
|
708
|
+
echo "$as_me: error: cannot find input file: $f" >&2;}
|
709
|
+
{ (exit 1); exit 1; }; }
|
710
|
+
echo "$f";;
|
711
|
+
*) # Relative
|
712
|
+
if test -f "$f"; then
|
713
|
+
# Build tree
|
714
|
+
echo "$f"
|
715
|
+
elif test -f "$srcdir/$f"; then
|
716
|
+
# Source tree
|
717
|
+
echo "$srcdir/$f"
|
718
|
+
else
|
719
|
+
# /dev/null tree
|
720
|
+
{ { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
|
721
|
+
echo "$as_me: error: cannot find input file: $f" >&2;}
|
722
|
+
{ (exit 1); exit 1; }; }
|
723
|
+
fi;;
|
724
|
+
esac
|
725
|
+
done` || { (exit 1); exit 1; }
|
726
|
+
|
727
|
+
if test x"$ac_file" != x-; then
|
728
|
+
{ echo "$as_me:$LINENO: creating $ac_file" >&5
|
729
|
+
echo "$as_me: creating $ac_file" >&6;}
|
730
|
+
rm -f "$ac_file"
|
731
|
+
fi
|
732
|
+
sed "/^[ ]*VPATH[ ]*=/{
|
733
|
+
s/:*\$(srcdir):*/:/;
|
734
|
+
s/:*\${srcdir}:*/:/;
|
735
|
+
s/:*@srcdir@:*/:/;
|
736
|
+
s/^\([^=]*=[ ]*\):*/\1/;
|
737
|
+
s/:*$//;
|
738
|
+
s/^[^=]*=[ ]*$//;
|
739
|
+
}
|
740
|
+
|
741
|
+
:t
|
742
|
+
/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
|
743
|
+
s,@configure_input@,$configure_input,;t t
|
744
|
+
s,@srcdir@,$ac_srcdir,;t t
|
745
|
+
s,@abs_srcdir@,$ac_abs_srcdir,;t t
|
746
|
+
s,@top_srcdir@,$ac_top_srcdir,;t t
|
747
|
+
s,@abs_top_srcdir@,$ac_abs_top_srcdir,;t t
|
748
|
+
s,@builddir@,$ac_builddir,;t t
|
749
|
+
s,@abs_builddir@,$ac_abs_builddir,;t t
|
750
|
+
s,@top_builddir@,$ac_top_builddir,;t t
|
751
|
+
s,@abs_top_builddir@,$ac_abs_top_builddir,;t t
|
752
|
+
s,@INSTALL@,$ac_INSTALL,;t t
|
753
|
+
" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
|
754
|
+
rm -f $tmp/stdin
|
755
|
+
if test x"$ac_file" != x-; then
|
756
|
+
mv $tmp/out $ac_file
|
757
|
+
else
|
758
|
+
cat $tmp/out
|
759
|
+
rm -f $tmp/out
|
760
|
+
fi
|
761
|
+
|
762
|
+
# Run the commands associated with the file.
|
763
|
+
case $ac_file in
|
764
|
+
bin/ncd ) chmod +x bin/ncd ;;
|
765
|
+
bin/ncdvector ) chmod +x bin/ncdvector ;;
|
766
|
+
bin/ncdmatrix ) chmod +x bin/ncdmatrix ;;
|
767
|
+
bin/labeltree ) chmod +x bin/labeltree ;;
|
768
|
+
bin/maketree ) chmod +x bin/maketree ;;
|
769
|
+
bin/makesvm ) chmod +x bin/makesvm ;;
|
770
|
+
scripts/makeSetup.sh ) chmod +x scripts/makeSetup.sh ;;
|
771
|
+
scripts/makedeb.zsh ) chmod +x scripts/makedeb.zsh ;;
|
772
|
+
esac
|
773
|
+
done
|
774
|
+
|
775
|
+
#
|
776
|
+
# CONFIG_HEADER section.
|
777
|
+
#
|
778
|
+
|
779
|
+
# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
|
780
|
+
# NAME is the cpp macro being defined and VALUE is the value it is being given.
|
781
|
+
#
|
782
|
+
# ac_d sets the value in "#define NAME VALUE" lines.
|
783
|
+
ac_dA='s,^\([ ]*\)#\([ ]*define[ ][ ]*\)'
|
784
|
+
ac_dB='[ ].*$,\1#\2'
|
785
|
+
ac_dC=' '
|
786
|
+
ac_dD=',;t'
|
787
|
+
# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
|
788
|
+
ac_uA='s,^\([ ]*\)#\([ ]*\)undef\([ ][ ]*\)'
|
789
|
+
ac_uB='$,\1#\2define\3'
|
790
|
+
ac_uC=' '
|
791
|
+
ac_uD=',;t'
|
792
|
+
|
793
|
+
for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
|
794
|
+
# Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
|
795
|
+
case $ac_file in
|
796
|
+
- | *:- | *:-:* ) # input from stdin
|
797
|
+
cat >$tmp/stdin
|
798
|
+
ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
|
799
|
+
ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
|
800
|
+
*:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
|
801
|
+
ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
|
802
|
+
* ) ac_file_in=$ac_file.in ;;
|
803
|
+
esac
|
804
|
+
|
805
|
+
test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5
|
806
|
+
echo "$as_me: creating $ac_file" >&6;}
|
807
|
+
|
808
|
+
# First look for the input files in the build tree, otherwise in the
|
809
|
+
# src tree.
|
810
|
+
ac_file_inputs=`IFS=:
|
811
|
+
for f in $ac_file_in; do
|
812
|
+
case $f in
|
813
|
+
-) echo $tmp/stdin ;;
|
814
|
+
[\\/$]*)
|
815
|
+
# Absolute (can't be DOS-style, as IFS=:)
|
816
|
+
test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
|
817
|
+
echo "$as_me: error: cannot find input file: $f" >&2;}
|
818
|
+
{ (exit 1); exit 1; }; }
|
819
|
+
# Do quote $f, to prevent DOS paths from being IFS'd.
|
820
|
+
echo "$f";;
|
821
|
+
*) # Relative
|
822
|
+
if test -f "$f"; then
|
823
|
+
# Build tree
|
824
|
+
echo "$f"
|
825
|
+
elif test -f "$srcdir/$f"; then
|
826
|
+
# Source tree
|
827
|
+
echo "$srcdir/$f"
|
828
|
+
else
|
829
|
+
# /dev/null tree
|
830
|
+
{ { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
|
831
|
+
echo "$as_me: error: cannot find input file: $f" >&2;}
|
832
|
+
{ (exit 1); exit 1; }; }
|
833
|
+
fi;;
|
834
|
+
esac
|
835
|
+
done` || { (exit 1); exit 1; }
|
836
|
+
# Remove the trailing spaces.
|
837
|
+
sed 's/[ ]*$//' $ac_file_inputs >$tmp/in
|
838
|
+
|
839
|
+
# Handle all the #define templates only if necessary.
|
840
|
+
if grep "^[ ]*#[ ]*define" $tmp/in >/dev/null; then
|
841
|
+
# If there are no defines, we may have an empty if/fi
|
842
|
+
:
|
843
|
+
cat >$tmp/defines.sed <<CEOF
|
844
|
+
/^[ ]*#[ ]*define/!b
|
845
|
+
t clr
|
846
|
+
: clr
|
847
|
+
${ac_dA}PACKAGE_NAME${ac_dB}PACKAGE_NAME${ac_dC}""${ac_dD}
|
848
|
+
${ac_dA}PACKAGE_TARNAME${ac_dB}PACKAGE_TARNAME${ac_dC}""${ac_dD}
|
849
|
+
${ac_dA}PACKAGE_VERSION${ac_dB}PACKAGE_VERSION${ac_dC}""${ac_dD}
|
850
|
+
${ac_dA}PACKAGE_STRING${ac_dB}PACKAGE_STRING${ac_dC}""${ac_dD}
|
851
|
+
${ac_dA}PACKAGE_BUGREPORT${ac_dB}PACKAGE_BUGREPORT${ac_dC}""${ac_dD}
|
852
|
+
${ac_dA}PACKAGE${ac_dB}PACKAGE${ac_dC}"complearn"${ac_dD}
|
853
|
+
${ac_dA}VERSION${ac_dB}VERSION${ac_dC}"0.6.2"${ac_dD}
|
854
|
+
${ac_dA}STDC_HEADERS${ac_dB}STDC_HEADERS${ac_dC}1${ac_dD}
|
855
|
+
${ac_dA}HAVE_SYS_TYPES_H${ac_dB}HAVE_SYS_TYPES_H${ac_dC}1${ac_dD}
|
856
|
+
${ac_dA}HAVE_SYS_STAT_H${ac_dB}HAVE_SYS_STAT_H${ac_dC}1${ac_dD}
|
857
|
+
${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
|
858
|
+
${ac_dA}HAVE_STRING_H${ac_dB}HAVE_STRING_H${ac_dC}1${ac_dD}
|
859
|
+
${ac_dA}HAVE_MEMORY_H${ac_dB}HAVE_MEMORY_H${ac_dC}1${ac_dD}
|
860
|
+
${ac_dA}HAVE_STRINGS_H${ac_dB}HAVE_STRINGS_H${ac_dC}1${ac_dD}
|
861
|
+
${ac_dA}HAVE_INTTYPES_H${ac_dB}HAVE_INTTYPES_H${ac_dC}1${ac_dD}
|
862
|
+
${ac_dA}HAVE_STDINT_H${ac_dB}HAVE_STDINT_H${ac_dC}1${ac_dD}
|
863
|
+
${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
|
864
|
+
${ac_dA}HAVE_STDLIB_H${ac_dB}HAVE_STDLIB_H${ac_dC}1${ac_dD}
|
865
|
+
${ac_dA}HAVE_SYS_TIME_H${ac_dB}HAVE_SYS_TIME_H${ac_dC}1${ac_dD}
|
866
|
+
${ac_dA}HAVE_UNISTD_H${ac_dB}HAVE_UNISTD_H${ac_dC}1${ac_dD}
|
867
|
+
CEOF
|
868
|
+
sed -f $tmp/defines.sed $tmp/in >$tmp/out
|
869
|
+
rm -f $tmp/in
|
870
|
+
mv $tmp/out $tmp/in
|
871
|
+
|
872
|
+
fi # grep
|
873
|
+
|
874
|
+
# Handle all the #undef templates
|
875
|
+
cat >$tmp/undefs.sed <<CEOF
|
876
|
+
/^[ ]*#[ ]*undef/!b
|
877
|
+
t clr
|
878
|
+
: clr
|
879
|
+
${ac_uA}PACKAGE_NAME${ac_uB}PACKAGE_NAME${ac_uC}""${ac_uD}
|
880
|
+
${ac_uA}PACKAGE_TARNAME${ac_uB}PACKAGE_TARNAME${ac_uC}""${ac_uD}
|
881
|
+
${ac_uA}PACKAGE_VERSION${ac_uB}PACKAGE_VERSION${ac_uC}""${ac_uD}
|
882
|
+
${ac_uA}PACKAGE_STRING${ac_uB}PACKAGE_STRING${ac_uC}""${ac_uD}
|
883
|
+
${ac_uA}PACKAGE_BUGREPORT${ac_uB}PACKAGE_BUGREPORT${ac_uC}""${ac_uD}
|
884
|
+
${ac_uA}PACKAGE${ac_uB}PACKAGE${ac_uC}"complearn"${ac_uD}
|
885
|
+
${ac_uA}VERSION${ac_uB}VERSION${ac_uC}"0.6.2"${ac_uD}
|
886
|
+
${ac_uA}STDC_HEADERS${ac_uB}STDC_HEADERS${ac_uC}1${ac_uD}
|
887
|
+
${ac_uA}HAVE_SYS_TYPES_H${ac_uB}HAVE_SYS_TYPES_H${ac_uC}1${ac_uD}
|
888
|
+
${ac_uA}HAVE_SYS_STAT_H${ac_uB}HAVE_SYS_STAT_H${ac_uC}1${ac_uD}
|
889
|
+
${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
|
890
|
+
${ac_uA}HAVE_STRING_H${ac_uB}HAVE_STRING_H${ac_uC}1${ac_uD}
|
891
|
+
${ac_uA}HAVE_MEMORY_H${ac_uB}HAVE_MEMORY_H${ac_uC}1${ac_uD}
|
892
|
+
${ac_uA}HAVE_STRINGS_H${ac_uB}HAVE_STRINGS_H${ac_uC}1${ac_uD}
|
893
|
+
${ac_uA}HAVE_INTTYPES_H${ac_uB}HAVE_INTTYPES_H${ac_uC}1${ac_uD}
|
894
|
+
${ac_uA}HAVE_STDINT_H${ac_uB}HAVE_STDINT_H${ac_uC}1${ac_uD}
|
895
|
+
${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
|
896
|
+
${ac_uA}HAVE_STDLIB_H${ac_uB}HAVE_STDLIB_H${ac_uC}1${ac_uD}
|
897
|
+
${ac_uA}HAVE_SYS_TIME_H${ac_uB}HAVE_SYS_TIME_H${ac_uC}1${ac_uD}
|
898
|
+
${ac_uA}HAVE_UNISTD_H${ac_uB}HAVE_UNISTD_H${ac_uC}1${ac_uD}
|
899
|
+
s,^[ ]*#[ ]*undef[ ][ ]*[a-zA-Z_][a-zA-Z_0-9]*,/* & */,
|
900
|
+
CEOF
|
901
|
+
sed -f $tmp/undefs.sed $tmp/in >$tmp/out
|
902
|
+
rm -f $tmp/in
|
903
|
+
mv $tmp/out $tmp/in
|
904
|
+
|
905
|
+
# Let's still pretend it is `configure' which instantiates (i.e., don't
|
906
|
+
# use $as_me), people would be surprised to read:
|
907
|
+
# /* config.h. Generated by config.status. */
|
908
|
+
if test x"$ac_file" = x-; then
|
909
|
+
echo "/* Generated by configure. */" >$tmp/config.h
|
910
|
+
else
|
911
|
+
echo "/* $ac_file. Generated by configure. */" >$tmp/config.h
|
912
|
+
fi
|
913
|
+
cat $tmp/in >>$tmp/config.h
|
914
|
+
rm -f $tmp/in
|
915
|
+
if test x"$ac_file" != x-; then
|
916
|
+
if diff $ac_file $tmp/config.h >/dev/null 2>&1; then
|
917
|
+
{ echo "$as_me:$LINENO: $ac_file is unchanged" >&5
|
918
|
+
echo "$as_me: $ac_file is unchanged" >&6;}
|
919
|
+
else
|
920
|
+
ac_dir=`(dirname "$ac_file") 2>/dev/null ||
|
921
|
+
$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
922
|
+
X"$ac_file" : 'X\(//\)[^/]' \| \
|
923
|
+
X"$ac_file" : 'X\(//\)$' \| \
|
924
|
+
X"$ac_file" : 'X\(/\)' \| \
|
925
|
+
. : '\(.\)' 2>/dev/null ||
|
926
|
+
echo X"$ac_file" |
|
927
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
928
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
929
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
930
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
931
|
+
s/.*/./; q'`
|
932
|
+
{ if $as_mkdir_p; then
|
933
|
+
mkdir -p "$ac_dir"
|
934
|
+
else
|
935
|
+
as_dir="$ac_dir"
|
936
|
+
as_dirs=
|
937
|
+
while test ! -d "$as_dir"; do
|
938
|
+
as_dirs="$as_dir $as_dirs"
|
939
|
+
as_dir=`(dirname "$as_dir") 2>/dev/null ||
|
940
|
+
$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
941
|
+
X"$as_dir" : 'X\(//\)[^/]' \| \
|
942
|
+
X"$as_dir" : 'X\(//\)$' \| \
|
943
|
+
X"$as_dir" : 'X\(/\)' \| \
|
944
|
+
. : '\(.\)' 2>/dev/null ||
|
945
|
+
echo X"$as_dir" |
|
946
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
947
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
948
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
949
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
950
|
+
s/.*/./; q'`
|
951
|
+
done
|
952
|
+
test ! -n "$as_dirs" || mkdir $as_dirs
|
953
|
+
fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
|
954
|
+
echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
|
955
|
+
{ (exit 1); exit 1; }; }; }
|
956
|
+
|
957
|
+
rm -f $ac_file
|
958
|
+
mv $tmp/config.h $ac_file
|
959
|
+
fi
|
960
|
+
else
|
961
|
+
cat $tmp/config.h
|
962
|
+
rm -f $tmp/config.h
|
963
|
+
fi
|
964
|
+
done
|
965
|
+
|
966
|
+
#
|
967
|
+
# CONFIG_COMMANDS section.
|
968
|
+
#
|
969
|
+
for ac_file in : $CONFIG_COMMANDS; do test "x$ac_file" = x: && continue
|
970
|
+
ac_dest=`echo "$ac_file" | sed 's,:.*,,'`
|
971
|
+
ac_source=`echo "$ac_file" | sed 's,[^:]*:,,'`
|
972
|
+
ac_dir=`(dirname "$ac_dest") 2>/dev/null ||
|
973
|
+
$as_expr X"$ac_dest" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
974
|
+
X"$ac_dest" : 'X\(//\)[^/]' \| \
|
975
|
+
X"$ac_dest" : 'X\(//\)$' \| \
|
976
|
+
X"$ac_dest" : 'X\(/\)' \| \
|
977
|
+
. : '\(.\)' 2>/dev/null ||
|
978
|
+
echo X"$ac_dest" |
|
979
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
980
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
981
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
982
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
983
|
+
s/.*/./; q'`
|
984
|
+
{ if $as_mkdir_p; then
|
985
|
+
mkdir -p "$ac_dir"
|
986
|
+
else
|
987
|
+
as_dir="$ac_dir"
|
988
|
+
as_dirs=
|
989
|
+
while test ! -d "$as_dir"; do
|
990
|
+
as_dirs="$as_dir $as_dirs"
|
991
|
+
as_dir=`(dirname "$as_dir") 2>/dev/null ||
|
992
|
+
$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
|
993
|
+
X"$as_dir" : 'X\(//\)[^/]' \| \
|
994
|
+
X"$as_dir" : 'X\(//\)$' \| \
|
995
|
+
X"$as_dir" : 'X\(/\)' \| \
|
996
|
+
. : '\(.\)' 2>/dev/null ||
|
997
|
+
echo X"$as_dir" |
|
998
|
+
sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
|
999
|
+
/^X\(\/\/\)[^/].*/{ s//\1/; q; }
|
1000
|
+
/^X\(\/\/\)$/{ s//\1/; q; }
|
1001
|
+
/^X\(\/\).*/{ s//\1/; q; }
|
1002
|
+
s/.*/./; q'`
|
1003
|
+
done
|
1004
|
+
test ! -n "$as_dirs" || mkdir $as_dirs
|
1005
|
+
fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
|
1006
|
+
echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
|
1007
|
+
{ (exit 1); exit 1; }; }; }
|
1008
|
+
|
1009
|
+
ac_builddir=.
|
1010
|
+
|
1011
|
+
if test "$ac_dir" != .; then
|
1012
|
+
ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
|
1013
|
+
# A "../" for each directory in $ac_dir_suffix.
|
1014
|
+
ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
|
1015
|
+
else
|
1016
|
+
ac_dir_suffix= ac_top_builddir=
|
1017
|
+
fi
|
1018
|
+
|
1019
|
+
case $srcdir in
|
1020
|
+
.) # No --srcdir option. We are building in place.
|
1021
|
+
ac_srcdir=.
|
1022
|
+
if test -z "$ac_top_builddir"; then
|
1023
|
+
ac_top_srcdir=.
|
1024
|
+
else
|
1025
|
+
ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
|
1026
|
+
fi ;;
|
1027
|
+
[\\/]* | ?:[\\/]* ) # Absolute path.
|
1028
|
+
ac_srcdir=$srcdir$ac_dir_suffix;
|
1029
|
+
ac_top_srcdir=$srcdir ;;
|
1030
|
+
*) # Relative path.
|
1031
|
+
ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
|
1032
|
+
ac_top_srcdir=$ac_top_builddir$srcdir ;;
|
1033
|
+
esac
|
1034
|
+
|
1035
|
+
# Do not use `cd foo && pwd` to compute absolute paths, because
|
1036
|
+
# the directories may not exist.
|
1037
|
+
case `pwd` in
|
1038
|
+
.) ac_abs_builddir="$ac_dir";;
|
1039
|
+
*)
|
1040
|
+
case "$ac_dir" in
|
1041
|
+
.) ac_abs_builddir=`pwd`;;
|
1042
|
+
[\\/]* | ?:[\\/]* ) ac_abs_builddir="$ac_dir";;
|
1043
|
+
*) ac_abs_builddir=`pwd`/"$ac_dir";;
|
1044
|
+
esac;;
|
1045
|
+
esac
|
1046
|
+
case $ac_abs_builddir in
|
1047
|
+
.) ac_abs_top_builddir=${ac_top_builddir}.;;
|
1048
|
+
*)
|
1049
|
+
case ${ac_top_builddir}. in
|
1050
|
+
.) ac_abs_top_builddir=$ac_abs_builddir;;
|
1051
|
+
[\\/]* | ?:[\\/]* ) ac_abs_top_builddir=${ac_top_builddir}.;;
|
1052
|
+
*) ac_abs_top_builddir=$ac_abs_builddir/${ac_top_builddir}.;;
|
1053
|
+
esac;;
|
1054
|
+
esac
|
1055
|
+
case $ac_abs_builddir in
|
1056
|
+
.) ac_abs_srcdir=$ac_srcdir;;
|
1057
|
+
*)
|
1058
|
+
case $ac_srcdir in
|
1059
|
+
.) ac_abs_srcdir=$ac_abs_builddir;;
|
1060
|
+
[\\/]* | ?:[\\/]* ) ac_abs_srcdir=$ac_srcdir;;
|
1061
|
+
*) ac_abs_srcdir=$ac_abs_builddir/$ac_srcdir;;
|
1062
|
+
esac;;
|
1063
|
+
esac
|
1064
|
+
case $ac_abs_builddir in
|
1065
|
+
.) ac_abs_top_srcdir=$ac_top_srcdir;;
|
1066
|
+
*)
|
1067
|
+
case $ac_top_srcdir in
|
1068
|
+
.) ac_abs_top_srcdir=$ac_abs_builddir;;
|
1069
|
+
[\\/]* | ?:[\\/]* ) ac_abs_top_srcdir=$ac_top_srcdir;;
|
1070
|
+
*) ac_abs_top_srcdir=$ac_abs_builddir/$ac_top_srcdir;;
|
1071
|
+
esac;;
|
1072
|
+
esac
|
1073
|
+
|
1074
|
+
|
1075
|
+
{ echo "$as_me:$LINENO: executing $ac_dest commands" >&5
|
1076
|
+
echo "$as_me: executing $ac_dest commands" >&6;}
|
1077
|
+
case $ac_dest in
|
1078
|
+
ext/Makefile ) cd $srcdir/ext ; $RUBYBIN extconf.rb ; echo 'distdir:' >> Makefile ;;
|
1079
|
+
esac
|
1080
|
+
done
|
1081
|
+
|
1082
|
+
{ (exit 0); exit 0; }
|