commonmeta-ruby 3.3.17 → 3.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/Gemfile.lock +37 -50
- data/bin/commonmeta +1 -1
- data/lib/commonmeta/cli.rb +7 -0
- data/lib/commonmeta/crossref_utils.rb +20 -0
- data/lib/commonmeta/readers/json_feed_reader.rb +19 -1
- data/lib/commonmeta/schema_utils.rb +1 -1
- data/lib/commonmeta/utils.rb +6 -4
- data/lib/commonmeta/version.rb +1 -1
- data/resources/{commonmeta_v0.9.2.json → commonmeta_v0.9.3.json} +32 -2
- data/spec/cli_spec.rb +1 -1
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/blog_post_with_non-url_id.yml +84 -18
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/blogger_post.yml +42 -14
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_author_name_suffix.yml +184 -55
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_doi.yml +76 -15
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_institutional_author.yml +33 -12
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_organizational_author.yml +44 -11
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_related_identifiers.yml +366 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_without_doi.yml +144 -11
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/jekyll_post.yml +42 -13
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/jekyll_post_with_anonymous_author.yml +17 -13
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/substack_post_with_broken_reference.yml +557 -262
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/syldavia_gazette_post_with_references.yml +76 -47
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/upstream_post_with_references.yml +303 -123
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/wordpress_post.yml +108 -12
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/wordpress_post_with_many_references.yml +3048 -441
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/wordpress_post_with_references.yml +178 -31
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/wordpress_post_with_tracking_code_on_url.yml +139 -17
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/another_schema_org_from_front-matter.yml +47 -48
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article.yml +5 -5
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article_from_datacite.yml +7 -7
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_rogue_scholar_with_anonymous_author.yml +17 -13
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_rogue_scholar_with_doi.yml +108 -12
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_rogue_scholar_with_organizational_author.yml +44 -11
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_rogue_scholar_with_relations.yml +366 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_upstream_blog.yml +200 -11
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_with_references.yml +303 -123
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/posted_content.yml +16 -16
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_another_science_blog.yml +17 -17
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_front_matter.yml +111 -113
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/schema_org_from_upstream_blog.yml +64 -57
- data/spec/readers/json_feed_reader_spec.rb +85 -57
- data/spec/writers/crossref_xml_writer_spec.rb +76 -40
- metadata +6 -4
data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/posted_content.yml
CHANGED
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announcements"},{"key":"2022011102351436000_2020.12.01.406702v5.54","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1128\/jcm.6.2.183-184.1977","article-title":"Nontypable
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Group B Streptococci isolated from human sources","volume":"6","year":"1977","journal-title":"Journal
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of clinical microbiology"},{"key":"2022011102351436000_2020.12.01.406702v5.55","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-39-4-471"},{"key":"2022011102351436000_2020.12.01.406702v5.56","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/21.7.1677"},{"key":"2022011102351436000_2020.12.01.406702v5.57","doi-asserted-by":"publisher","DOI":"10.1016\/0022-2836(80)90283-1"},{"key":"2022011102351436000_2020.12.01.406702v5.58","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00153-10"},{"key":"2022011102351436000_2020.12.01.406702v5.59","doi-asserted-by":"publisher","DOI":"10.1128\/JB.182.6.1529-1540.2000"},{"key":"2022011102351436000_2020.12.01.406702v5.60","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01882-18"},{"key":"2022011102351436000_2020.12.01.406702v5.61","doi-asserted-by":"publisher","DOI":"10.1128\/JB.185.4.1208-1217.2003"}],"container-title":[],"original-title":[],"link":[{"URL":"https:\/\/syndication.highwire.org\/content\/doi\/10.1101\/2020.12.01.406702","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,5,25]],"date-time":"2022-05-25T19:51:18Z","timestamp":1653508278000},"score":1,"resource":{"primary":{"URL":"http:\/\/biorxiv.org\/lookup\/doi\/10.1101\/2020.12.01.406702"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,12,1]]},"references-count":61,"URL":"http:\/\/dx.doi.org\/10.1101\/2020.12.01.406702","relation":{"is-preprint-of":[{"id-type":"doi","id":"10.1371\/journal.pbio.3001555","asserted-by":"subject"}]},"published":{"date-parts":[[2020,12,1]]},"subtype":"preprint"}}'
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<!doctype html><html lang=en-us><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="IE=edge,chrome=1"><meta name=viewport content="width=device-width,initial-scale=1"><meta name=format-detection content="telephone=no"><title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services | Donny Winston</title><script type=application/ld+json>{"@context":{"@vocab":"https://schema.org/","dcterms":"http://purl.org/dc/terms/"},"@type":"BlogPosting","author":[{"@type":"Person","name":"Donny Winston","image":{"@type":"ImageObject","url":"https://www.gravatar.com/avatar/7fd9c14251809462e5f9cee070cf881d?s=250&r=x&d=mp","width":250,"height":250},"url":"https://donnywinston.com","identifier":"https://orcid.org/0000-0002-8424-0604","sameAs":["https://twitter.com/donnywinston","https://www.linkedin.com/in/donnywinston/"]}],"publisher":{"@type":"Organization","name":"Polyneme LLC","url":"https://www.polyneme.xyz","logo":{"@type":"ImageObject","url":"https://polyneme.xyz/icons/icon-96x96.png","width":60,"height":60}},"headline":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","url":"https:\/\/donnywinston.com\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","datePublished":"2022-10-21 13:24:46 -0400 -0400","dateModified":"2022-10-21 13:24:46 -0400 -0400","keywords":[],"@id":"https://doi.org/10.57099/11h5yt3819","name":"Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services","educationalLevel":"Beginner","description":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","competencyRequired":[],"teaches":[],"abstract":"How does a Research Software Engineer (RSE) — often responsible for developing infrastructure to manage and share digital research objects (data, models, code, notebooks, workflows, etc.","about":[{"@type":"DefinedTerm","@id":"http://edamontology.org/data_3669","inDefinedTermSet":"http://edamontology.org","termCode":"data_3670","name":"Training material","url":"http://edamontology.org/data_3669"},{"@type":"DefinedTerm","@id":"http://edamontology.org/topic_0605","inDefinedTermSet":"http://edamontology.org","termCode":"topic_0605","name":"Informatics","alternate_name":["Information science","Knowledge management","Information management"],"description":"The study and practice of information processing and use of computer information systems.","url":"http://edamontology.org/data_3669"}],"audience":{"@type":"Audience","audienceType":"People interested in publishing their research output"},"identifier":"https://n2t.net/ark:57802/dw0/blog/\/posts\/implementing-the-fair-principles-through-fair-enabling-artifacts-and-services\/","inLanguage":["en-US"],"learningResourceType":["blogpost"],"license":["https://creativecommons.org/licenses/by/4.0/"],"timeRequired":"PT10M","creativeWorkStatus":"Active","dateCreated":"2022-10-21 13:24:46 -0400 -0400","version":"1"}</script><link rel=apple-touch-icon sizes=180x180 href=https://files.polyneme.xyz/polyneme-logo-sq-AdH548JPkxW0qf3M5NVTVLt5qdVKFN28AKKvS35A2ndmDMQ0baH90H5APJvIITO2UkFht8rLzZGQTxob8DCqG3KqnsEOczShPKoT.png><link rel=icon type=image/png sizes=32x32 href=https://files.polyneme.xyz/polyneme-logo-sq-AdH548JPkxW0qf3M5NVTVLt5qdVKFN28AKKvS35A2ndmDMQ0baH90H5APJvIITO2UkFht8rLzZGQTxob8DCqG3KqnsEOczShPKoT.png><link rel=icon type=image/png sizes=16x16 href=https://files.polyneme.xyz/polyneme-logo-sq-AdH548JPkxW0qf3M5NVTVLt5qdVKFN28AKKvS35A2ndmDMQ0baH90H5APJvIITO2UkFht8rLzZGQTxob8DCqG3KqnsEOczShPKoT.png><link rel=manifest href=/manifest.json><link rel=mask-icon href=/safari-pinned-tab.svg color=#ff3db4><meta name=theme-color content="#ffffff"><link rel=me href=https://fairpoints.social/@donny><link rel=stylesheet href=https://donnywinston.com/css/main.min.b9c692d7b890e6a24e0280548d2a8519d6f71fa047a6c9fac701d2de45896323.css><link rel=stylesheet href=https://donnywinston.com/css/custom.min.817b30e0146652a7e9e48e1ca44f82117b0e69dca0b10ac258150d1c6f325fcd.css></head><body><nav><header><div class=site-title><a href=/>Donny Winston</a></div></header><div class=nav-menu><a class="color-link nav-link" href=/about/>About</a>
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24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></nav><div id=content class=content-container><h1 class=post-title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services</h1><time>October 21, 2022</time><div><p><p>How does a <a href=https://researchsoftware.org/>Research Software Engineer (RSE)</a> — often
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models, code, notebooks, workflows, etc.) — get from “Yes, FAIR sounds great, but how?” to “I better
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for any actual given digital research object.</figcaption></figure></p></div><div class=page-footer></div><link rel=stylesheet type=text/css href=/css/katex.min.css crossorigin=anonymous><script type=text/javascript src=/js/katex.min.js crossorigin=anonymous></script>
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24.2012564 17.2229657 25.603448 17.2229657 26.0296121 17.2229657 26.3775663 17.4575954 26.7821827 18.116793 26.6552912 23.2786458 24.9322794 27 20.0633148 27 14.3212723 27 7.14112562 21.1789496 1.32087331 13.9988029 1.32087331"/></svg></a></div><div class=hugo-attrib><p><a href=https://github.com/kimcc/hugo-theme-noteworthy target=_blank rel=noopener>Noteworthy theme</a></p><p><a href=https://gohugo.io target=_blank rel=noopener>Built with Hugo</a></p></div><script src=https://donnywinston.com/js/main.min.a7205ef73b078c8daed6fe1b0826e8ba229ffabbb69d299d9446cf41f2c7d8aa.js integrity="sha256-pyBe9zsHjI2u1v4bCCbouiKf+ru2nSmdlEbPQfLH2Ko=" crossorigin=anonymous></script></footer></nav><div id=content class=content-container><h1 class=post-title>Implementing the FAIR Principles Through FAIR-Enabling Artifacts and Services</h1><time>October 21, 2022</time><div><p><p>How does a <a href=https://researchsoftware.org/>Research Software Engineer (RSE)</a> — often
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models, code, notebooks, workflows, etc.) — get from “Yes, FAIR sounds great, but how?” to “I better
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understand what the FAIR principles really mean and how I can put them into practice.”? I hope the
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(from Box 2 of the <a href=https://doi.org/10.1038/sdata.2016.18>seminal publication</a>)
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for any actual given digital research object.</figcaption></figure></p></div><div class=page-footer></div><link rel=stylesheet type=text/css href=/css/katex.min.css crossorigin=anonymous><script type=text/javascript src=/js/katex.min.js crossorigin=anonymous></script>
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