carray 3.0.2 → 3.0.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/CHANGELOG.md +568 -0
- data/README.md +6 -6
- data/carray.gemspec +1 -1
- data/ext/ca_axis_descriptor.h +27 -24
- data/ext/ca_axis_dispatch.c +220 -0
- data/ext/ca_axis_group.c +201 -123
- data/ext/ca_binop_dispatch.c +46 -52
- data/ext/ca_binop_dispatch.h +1 -1
- data/ext/ca_categorical_iterator.c +249 -183
- data/ext/ca_compare.c +7 -12
- data/ext/ca_for_buffer.h +21 -68
- data/ext/ca_group_iter.c +38 -23
- data/ext/ca_kernel_iterator.c +1765 -2076
- data/ext/ca_kernel_iterator.h +584 -566
- data/ext/ca_monop_dispatch.c +86 -63
- data/ext/ca_monop_dispatch.h +5 -0
- data/ext/ca_obj_array.c +223 -56
- data/ext/ca_obj_bincmp.c +172 -138
- data/ext/ca_obj_binop.c +116 -230
- data/ext/ca_obj_bitarray.c +40 -26
- data/ext/ca_obj_bitfield.c +100 -68
- data/ext/ca_obj_block.c +19 -9
- data/ext/ca_obj_byte_swap.c +45 -46
- data/ext/ca_obj_const_string.c +269 -44
- data/ext/ca_obj_face.c +612 -89
- data/ext/ca_obj_face.h +111 -47
- data/ext/ca_obj_fake.c +36 -79
- data/ext/ca_obj_farray.c +7 -3
- data/ext/ca_obj_field.c +33 -8
- data/ext/ca_obj_fixlen_string.c +23 -24
- data/ext/ca_obj_grid.c +541 -210
- data/ext/ca_obj_meld.c +331 -111
- data/ext/ca_obj_moncmp.c +80 -65
- data/ext/ca_obj_monop.c +177 -149
- data/ext/ca_obj_object.c +664 -248
- data/ext/ca_obj_record.c +63 -23
- data/ext/ca_obj_reduce.c +18 -16
- data/ext/ca_obj_refer.c +140 -58
- data/ext/ca_obj_remap.c +85 -24
- data/ext/ca_obj_repeat.c +24 -9
- data/ext/ca_obj_roll.c +121 -16
- data/ext/ca_obj_select.c +61 -58
- data/ext/ca_obj_select_axis.c +73 -107
- data/ext/ca_obj_shift.c +32 -102
- data/ext/ca_obj_stack.c +372 -122
- data/ext/ca_obj_stride.c +348 -140
- data/ext/ca_obj_string.c +88 -22
- data/ext/ca_obj_tile.c +38 -21
- data/ext/ca_obj_time.c +45 -31
- data/ext/ca_obj_timedelta.c +43 -29
- data/ext/ca_obj_transpose.c +17 -6
- data/ext/ca_obj_triop.c +125 -141
- data/ext/ca_obj_window.c +330 -44
- data/ext/ca_op_ipower.c +24 -11
- data/ext/ca_op_powi.h +57 -30
- data/ext/ca_pow5_table.h +656 -0
- data/ext/ca_sort_kernels.h +70 -0
- data/ext/ca_sweep_engine.c +104 -81
- data/ext/ca_sweep_engine.h +7 -20
- data/ext/ca_triop_dispatch.c +4 -1
- data/ext/ca_triop_dispatch.h +5 -2
- data/ext/caframe_csv_reader.c +542 -0
- data/ext/carray.h +241 -92
- data/ext/carray_access.c +608 -276
- data/ext/carray_address_basis.c +494 -97
- data/ext/carray_attribute.c +129 -4
- data/ext/carray_bincount.c +39 -7
- data/ext/carray_broadcast.c +56 -19
- data/ext/carray_build_flags.h +1 -1
- data/ext/carray_call_cfunc.c +108 -28
- data/ext/carray_cast.c +1576 -223
- data/ext/carray_cast_func.rb +77 -24
- data/ext/carray_class.c +4 -3
- data/ext/carray_conversion.c +208 -75
- data/ext/carray_copy.c +82 -24
- data/ext/carray_core.c +646 -162
- data/ext/carray_count.c +171 -88
- data/ext/carray_element.c +94 -60
- data/ext/carray_factorize.c +670 -324
- data/ext/carray_generate.c +260 -83
- data/ext/carray_histogram.c +209 -106
- data/ext/carray_hold.c +14 -16
- data/ext/carray_index_classifier.c +422 -243
- data/ext/carray_internal.h +692 -3
- data/ext/carray_kernels_bincmp.c +7 -0
- data/ext/carray_kernels_binop.c +487 -120
- data/ext/carray_kernels_init.c +653 -50
- data/ext/carray_kernels_moncmp.c +15 -8
- data/ext/carray_kernels_monop.c +99 -43
- data/ext/carray_kernels_reduce_aggregate.c +3925 -6112
- data/ext/carray_kernels_reduce_boolean.c +112 -36
- data/ext/carray_kernels_reduce_cumulative.c +2127 -6903
- data/ext/carray_kernels_reduce_extreme.c +3032 -2892
- data/ext/carray_kernels_reduce_variance.c +439 -500
- data/ext/carray_kernels_scan.c +1097 -488
- data/ext/carray_kernels_search.c +3787 -2176
- data/ext/carray_kernels_sort.c +1200 -920
- data/ext/carray_kernels_triop.c +479 -7
- data/ext/carray_key_windows.c +216 -0
- data/ext/carray_lazy.c +967 -153
- data/ext/carray_loop.c +81 -65
- data/ext/carray_mask.c +910 -324
- data/ext/carray_math_kernel.h +1 -0
- data/ext/carray_median_percentile.c +299 -100
- data/ext/carray_memory_view.c +872 -758
- data/ext/carray_operator.c +1171 -364
- data/ext/carray_order.c +505 -133
- data/ext/carray_partition.c +112 -65
- data/ext/carray_random.c +327 -239
- data/ext/carray_round.c +273 -0
- data/ext/carray_scatter.c +346 -78
- data/ext/carray_segment.c +257 -0
- data/ext/carray_slab.c +249 -86
- data/ext/carray_sort.c +224 -227
- data/ext/carray_sort_kernel.c +8 -1
- data/ext/carray_struct.c +118 -39
- data/ext/carray_test.c +193 -69
- data/ext/carray_time_text.c +1182 -0
- data/ext/carray_undef.c +4 -0
- data/ext/carray_utils.c +579 -113
- data/ext/extconf.rb +27 -2
- data/ext/mk_call_cfunc.rb +19 -4
- data/ext/mk_pow5_table.rb +35 -0
- data/ext/mkkernel.rb +1202 -1014
- data/ext/ruby_carray.c +17 -5
- data/ext/version.h +4 -4
- data/ext/version.rb +4 -2
- data/lib/carray/attribute.rb +160 -17
- data/lib/carray/autoload_carray.rb +23 -27
- data/lib/carray/autoload_method_extension.rb +20 -5
- data/lib/carray/axis_group.rb +360 -63
- data/lib/carray/basics.rb +162 -28
- data/lib/carray/bincount_nd.rb +18 -2
- data/lib/carray/block_iterator.rb +231 -58
- data/lib/carray/boolean_reduce.rb +34 -42
- data/lib/carray/categorical.rb +242 -52
- data/lib/carray/categorical_iterator.rb +437 -827
- data/lib/carray/complex.rb +41 -34
- data/lib/carray/conditional.rb +150 -14
- data/lib/carray/const_string.rb +59 -4
- data/lib/carray/construct.rb +15 -11
- data/lib/carray/data_type_extension.rb +1 -0
- data/lib/carray/distance_limit.rb +77 -0
- data/lib/carray/fixlen_string.rb +7 -1
- data/lib/carray/frame/column_verbs.rb +70 -0
- data/lib/carray/frame/concat.rb +157 -6
- data/lib/carray/frame/convert.rb +82 -7
- data/lib/carray/frame/csv_parser.rb +688 -87
- data/lib/carray/frame/describe.rb +80 -0
- data/lib/carray/frame/frame.rb +369 -45
- data/lib/carray/frame/group.rb +631 -90
- data/lib/carray/frame/io.rb +506 -79
- data/lib/carray/frame/join.rb +411 -62
- data/lib/carray/frame/records.rb +116 -19
- data/lib/carray/frame/reshape.rb +455 -0
- data/lib/carray/frame/sort.rb +30 -18
- data/lib/carray/frame/verbs.rb +868 -61
- data/lib/carray/frame/windows.rb +117 -0
- data/lib/carray/frame.rb +4 -0
- data/lib/carray/fuse_source.rb +118 -2
- data/lib/carray/fusion.rb +257 -42
- data/lib/carray/histogram.rb +6 -1
- data/lib/carray/inspect.rb +54 -13
- data/lib/carray/iterator.rb +99 -9
- data/lib/carray/key_windows.rb +620 -0
- data/lib/carray/lazy.rb +216 -193
- data/lib/carray/mask_gap_fill.rb +112 -92
- data/lib/carray/math.rb +32 -19
- data/lib/carray/meld_reduce.rb +52 -21
- data/lib/carray/methods/align_addr.rb +8 -4
- data/lib/carray/methods/bin.rb +26 -18
- data/lib/carray/methods/bincount.rb +18 -2
- data/lib/carray/methods/bit_string.rb +15 -4
- data/lib/carray/methods/choose.rb +16 -3
- data/lib/carray/methods/composition.rb +18 -10
- data/lib/carray/methods/factorize.rb +2 -2
- data/lib/carray/methods/gather_nd.rb +25 -5
- data/lib/carray/methods/insert_block.rb +9 -14
- data/lib/carray/methods/is_between.rb +59 -0
- data/lib/carray/methods/is_in.rb +140 -10
- data/lib/carray/methods/join.rb +2 -7
- data/lib/carray/methods/lag.rb +49 -0
- data/lib/carray/methods/locate_addr.rb +182 -45
- data/lib/carray/methods/mode.rb +18 -1
- data/lib/carray/methods/nunique.rb +11 -6
- data/lib/carray/methods/repeat.rb +1 -20
- data/lib/carray/methods/resize.rb +21 -23
- data/lib/carray/methods/snap.rb +34 -12
- data/lib/carray/methods/unique.rb +11 -2
- data/lib/carray/methods/value_counts.rb +4 -11
- data/lib/carray/record_order.rb +208 -0
- data/lib/carray/rng.rb +3 -0
- data/lib/carray/runtime.rb +65 -17
- data/lib/carray/segment_iterator.rb +1221 -0
- data/lib/carray/serialize.rb +214 -30
- data/lib/carray/slab_iterator.rb +101 -27
- data/lib/carray/stack.rb +10 -4
- data/lib/carray/string.rb +105 -5
- data/lib/carray/string_operation_extension.rb +12 -4
- data/lib/carray/struct.rb +137 -58
- data/lib/carray/struct_builder.rb +124 -17
- data/lib/carray/time.rb +1222 -186
- data/lib/carray/window_iterator.rb +242 -81
- data/lib/carray.rb +9 -2
- data/yard-stubs/ca_obj_array.rb +4 -4
- data/yard-stubs/ca_obj_bitarray.rb +7 -0
- data/yard-stubs/ca_obj_bitfield.rb +23 -12
- data/yard-stubs/ca_obj_fake.rb +1 -1
- data/yard-stubs/ca_obj_field.rb +5 -1
- data/yard-stubs/ca_obj_grid.rb +21 -10
- data/yard-stubs/ca_obj_refer.rb +5 -4
- data/yard-stubs/ca_obj_roll.rb +2 -3
- data/yard-stubs/ca_obj_shift.rb +5 -1
- data/yard-stubs/ca_obj_stride.rb +10 -7
- data/yard-stubs/ca_obj_tile.rb +1 -1
- data/yard-stubs/ca_obj_transpose.rb +1 -1
- data/yard-stubs/ca_obj_window.rb +9 -5
- data/yard-stubs/carray_access.rb +11 -5
- data/yard-stubs/carray_attribute.rb +0 -5
- data/yard-stubs/carray_broadcast.rb +1 -1
- data/yard-stubs/carray_cast.rb +88 -43
- data/yard-stubs/carray_conversion.rb +15 -2
- data/yard-stubs/carray_copy.rb +12 -5
- data/yard-stubs/carray_core.rb +3 -3
- data/yard-stubs/carray_count.rb +9 -0
- data/yard-stubs/carray_element.rb +10 -4
- data/yard-stubs/carray_generate.rb +21 -1
- data/yard-stubs/carray_lazy.rb +5 -1
- data/yard-stubs/carray_loop.rb +4 -1
- data/yard-stubs/carray_mask.rb +60 -12
- data/yard-stubs/carray_math.rb +52 -14
- data/yard-stubs/carray_median_percentile.rb +15 -8
- data/yard-stubs/carray_memory_view.rb +40 -23
- data/yard-stubs/carray_order.rb +61 -29
- data/yard-stubs/carray_random.rb +13 -4
- data/yard-stubs/carray_scatter.rb +21 -9
- data/yard-stubs/carray_segment.rb +72 -0
- data/yard-stubs/carray_slab.rb +10 -2
- data/yard-stubs/carray_sort.rb +49 -8
- data/yard-stubs/carray_test.rb +15 -3
- data/yard-stubs/carray_utils.rb +0 -26
- metadata +19 -5
- data/ext/ca_for_each_element.h +0 -239
- data/ext/carray_kernels_map.c +0 -3467
- data/lib/carray/arrow_tensor.rb +0 -401
- data/lib/carray/table.rb +0 -108
data/lib/carray/frame/group.rb
CHANGED
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@@ -9,49 +9,230 @@
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class CAFrame
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# Group rows by one or more keys. Each key is a column name (String) or an
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# external length-N CArray. Returns a GroupedFrame.
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#
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# With one key, a summary's index is the key's value of each group. With
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# several, each key is a column of a summary, holding its part of each
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# group's key, and the summary has no index; a CArray key among several
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# names its column by its position, "key0", "key1", ....
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def group_by(*keys)
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raise ArgumentError, "group_by needs at least one key" if keys.empty?
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CAFrame.__send__(:refuse_repeated_names, keys.grep(String), "group_by")
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cat = grouping_categorical(keys)
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-
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-
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if keys.size == 1
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axis = keys.first.is_a?(String) ? keys.first : "group"
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return GroupedFrame.new(self, cat, axis, keys.grep(String), key: key_column(keys.first))
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end
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names = keys.each_with_index.map { |k, i| k.is_a?(String) ? k : "key#{i}" }
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CAFrame.__send__(:refuse_repeated_names, names, "group_by")
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GroupedFrame.new(self, cat, "group", keys.grep(String),
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key_columns: names.zip(keys.map { |k| key_column(k) }).to_h)
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end
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# Whether each row repeats another row: a boolean column, true for the rows
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# whose values in the named columns (every column when none are named)
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# appear on more than one row, except the one +except:+ leaves out --
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#
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# except: :first every occurrence but the first (the default)
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# except: :last every occurrence but the last
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# except: :none every occurrence
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#
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# so +df[df.is_duplicate.not]+ keeps one row of each, and
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# +is_duplicate(except: :none).not+ is the rows that appear only once.
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# Values compare as group_by compares keys (NaN is one value, -0.0 is 0.0),
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# and a row with a masked cell in those columns is never a duplicate, as a
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# masked key is in no group. The index is compared only when named
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# (by the row axis name, as group_by takes it).
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#
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# df[df.is_duplicate.not] # the rows without repeats
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# df.is_duplicate("station", "time") # repeats of the pair
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# df.is_duplicate(except: :none).not # the rows that appear once
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#
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# @param names [Array<String>] the columns to compare; default every column.
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# @param except [Symbol] the occurrence left unmarked: :first, :last or :none.
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# @return [CArray] boolean, one value per row.
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# @raise [KeyError] for a name that is no column.
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# @raise [ArgumentError] when a compared column is N-D, there is no column
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# to compare, or +except:+ is not one of the three.
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def is_duplicate(*names, except: :first)
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unless %i[first last none].include?(except)
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raise ArgumentError,
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"is_duplicate: except: must be :first, :last or :none (got #{except.inspect})"
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end
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names = column_keys(names, "is_duplicate")
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names = column_names if names.empty?
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raise ArgumentError, "is_duplicate: the frame has no column to compare" if names.empty?
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cols = names.map { |n| key_column(n, "is_duplicate") }
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cat = CACategorical.send(:from_keys, cols)
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codes = cat.codes
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out =
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case except
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when :first then codes.mask_duplicates.is_masked
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when :last then codes.flip(0).mask_duplicates.is_masked.flip(0).copy
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when :none
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index = codes.value.int64
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index[codes.is_masked] = 0 if codes.has_mask?
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sizes = cat.category_sizes
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sizes.elements > 0 ? sizes[index].gt(1) : CArray.boolean(nrow) { false }
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end
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codes.has_mask? ? out & codes.is_not_masked : out
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end
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# Group rows into time bins of length +unit+ along the time column (or the
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# time index) +name+, for the reductions GroupedFrame offers:
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#
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# df.resample("time", "1 hour").mean
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# df.resample("time", "1 day", fill: true).aggregate("rain" => ["rain", :sum])
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#
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# The result's index is the bin labels as a CATime, in time order, and its
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# row axis is named after +name+.
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#
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# +label: :left+ (the default) makes each bin start at its label and hold
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# the times at or after it: [00:00, 01:00) is labelled 00:00. +label: :right+
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# makes it end at its label and hold the times up to and including it:
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# (00:00, 01:00] is labelled 01:00, the convention for a value that
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# describes the hour before it. +origin:+ shifts the bins as +CATime#floor+
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# does ("1 hour" with origin 00:30 gives 00:30, 01:30, ...).
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#
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# Without +fill:+, a bin with no rows does not appear. With +fill: true+
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# every bin from the first to the last is a row, and an empty one reduces
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# as an empty reduction does: UNDEF for +mean+, 0 for +count+ and +sum+.
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# A row whose time is masked belongs to no bin.
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#
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# +by:+ (a column name or an Array of them) bins each group of rows on its
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# own: a group is the rows sharing the +by:+ values and a bin. The result
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# then has no index: the +by:+ columns and the bin times (named +name+)
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# are its first columns, the groups in the order their +by:+ values first
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# appear and the bins of each in time order. With +fill: true+ every group
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# has every bin from the first to the last of the whole frame. A row whose
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# +by:+ value is masked belongs to no group.
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#
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# df.resample("date", "1 week", by: "shop").sum
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#
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# @param name [String] the time column, or the index's axis name.
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# @param unit [String, Symbol, CATime::Resolution] the bin length.
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# @param origin [nil, Time, String, CATime::Element] where bins start.
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# @param label [:left, :right] which end of a bin names it and is closed.
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# @param fill [Boolean] whether bins with no rows are rows of the result.
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# @param by [nil, String, Array<String>] columns whose groups are binned apart.
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# neither :left nor :right, or +by:+ names the time column.
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def resample(name, unit, origin: nil, label: :left, fill: false, by: nil)
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name = column_key(name, "resample")
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time = key_column(name, "resample")
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unless time.is_a?(CATime)
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raise ArgumentError, "resample: #{name.inspect} is not a time column (got #{time.class})"
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end
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bins =
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case label
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when :left then time.floor(unit: unit, origin: origin)
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when :right then time.ceil(unit: unit, origin: origin)
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else
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raise ArgumentError, "resample: label: must be :left or :right (got #{label.inspect})"
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end
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# key-labels: the bins are the index, given the column's attributes below.
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grid = fill && bins.count_not_masked > 0 ? resample_grid(bins, unit) : bins.unique(sort: true)
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return resample_by(name, time, bins, grid, by, fill) unless by.nil?
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cat = CACategorical.from_codes(bins.locate_addr(grid), grid.to_a)
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end
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# resample with by:. A group is a (by values, bin) pair, coded as
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# group * bins + bin, so the codes run through the groups in the order their
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# by values first appear and through each group's bins in time order.
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private def resample_by(name, time, bins, grid, by, fill)
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by_names = column_keys(Array(by), "resample")
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raise ArgumentError, "resample: by: names no column" if by_names.empty?
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if by_names.include?(name)
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raise ArgumentError, "resample: by: names the time column #{name.inspect}"
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end
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by_cols = by_names.map { |n| key_column(n, "resample") }
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gcat = CACategorical.send(:from_keys, by_cols)
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ng = gcat.labels.size
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nb = grid.elements
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comb = gcat.codes.int64 * nb + bins.locate_addr(grid).int64
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# key-labels: the used (group, bin) codes, not labels; those go through key_labels below
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occupied = fill ? CArray.int64(ng * nb).seq! : comb.unique(sort: true)
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codes = fill ? comb : comb.locate_addr(occupied)
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g_of = nb > 0 ? occupied / nb : occupied
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b_of = nb > 0 ? occupied % nb : occupied
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# Each group's by values, from its first row.
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order = gcat.sort_addr
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first = order[CArray.segment_offsets(lengths: gcat.category_sizes)[0...ng]]
|
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columns = {}
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by_names.zip(by_cols).each do |n, col|
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columns[n] = CAFrame.__send__(:key_labels, col, col.project(first))[g_of].copy
|
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end
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columns[name] = CAFrame.__send__(:key_labels, time, grid[b_of].copy)
|
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glabels = gcat.labels
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blabels = grid.to_a
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labels = occupied.to_a.map do |c|
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g, b = c.divmod(nb)
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parts = by_names.size == 1 ? [glabels[g]] : glabels[g]
|
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|
+
parts + [blabels[b]]
|
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|
+
end
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|
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cat = CACategorical.from_codes(codes, labels)
|
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|
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key_names = by_names + (@columns.key?(name) ? [name] : [])
|
|
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|
+
GroupedFrame.new(self, cat, "group", key_names, label_columns: columns)
|
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|
+
end
|
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+
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|
+
# Every bin from the first occupied one to the last, stepped from the
|
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181
|
+
# first bin so an origin's phase (or label: :right) is kept. A month or a
|
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182
|
+
# year cannot be stepped on a finer grid, so it is stepped on the one-month
|
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183
|
+
# or one-year grid and then given the bins' unit, as the labels without
|
|
184
|
+
# fill: are.
|
|
185
|
+
private def resample_grid(bins, unit)
|
|
186
|
+
base = CATime::Resolution.parse(unit).base
|
|
187
|
+
if %i[Y M].include?(base)
|
|
188
|
+
CArray.time_range(bins.min, bins.max, unit: base, step: unit).to_unit(bins.unit)
|
|
189
|
+
else
|
|
190
|
+
CArray.time_range(bins.min, bins.max, unit: bins.unit, step: unit)
|
|
191
|
+
end
|
|
17
192
|
end
|
|
18
193
|
|
|
19
194
|
# Number of rows currently selected — used by group per-group view-frames
|
|
20
195
|
# and elsewhere; already provided by the core (attr_reader :nrow).
|
|
21
196
|
|
|
22
197
|
private def grouping_categorical(keys)
|
|
23
|
-
|
|
24
|
-
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|
25
|
-
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26
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-
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-
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-
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42
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-
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-
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-
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-
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-
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48
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-
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49
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-
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50
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-
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|
51
|
-
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|
52
|
-
|
|
53
|
-
|
|
198
|
+
CACategorical.send(:from_keys, keys.map { |k| key_column(k) })
|
|
199
|
+
end
|
|
200
|
+
|
|
201
|
+
# The column a key names, checked -- the one reading of a key every verb
|
|
202
|
+
# that takes one goes through (group_by, is_duplicate, sort_by_key, join,
|
|
203
|
+
# join_asof, align, pivot, resample, windows): a column of that name, or
|
|
204
|
+
# the index by the row axis name; or a CArray of one value per row. It
|
|
205
|
+
# gives each row one value. +verb+ is the method the caller called, for
|
|
206
|
+
# the messages.
|
|
207
|
+
private def key_column(key, verb = "group_by")
|
|
208
|
+
col = case key
|
|
209
|
+
when String
|
|
210
|
+
# The index names the rows, so it is a key as a column is, by the
|
|
211
|
+
# row axis name, as resample and pivot take it.
|
|
212
|
+
@columns.fetch(key) do
|
|
213
|
+
next @index if @index && @axis_name == key
|
|
214
|
+
raise KeyError, "#{verb}: no column #{key.inspect}"
|
|
215
|
+
end
|
|
216
|
+
when CArray
|
|
217
|
+
unless key.shape[0] == nrow
|
|
218
|
+
raise ArgumentError,
|
|
219
|
+
"#{verb}: the key has #{key.shape[0]} values for #{nrow} rows"
|
|
220
|
+
end
|
|
221
|
+
key
|
|
222
|
+
when Symbol
|
|
223
|
+
column_key(key, verb)
|
|
224
|
+
else
|
|
225
|
+
raise ArgumentError, "#{verb}: a group key is a column name or a CArray (got #{key.class})"
|
|
226
|
+
end
|
|
227
|
+
# A key gives each row one value. An N-D one would be categorized cell
|
|
228
|
+
# by cell, making groups of cells rather than of rows.
|
|
229
|
+
unless col.ndim == 1
|
|
230
|
+
name = key.is_a?(String) ? "#{key.inspect} " : ""
|
|
231
|
+
raise ArgumentError,
|
|
232
|
+
"#{verb}: the key #{name}has shape #{col.shape.inspect}, not one value per row; " \
|
|
233
|
+
"use one of its components (e.g. df[name][nil, 0])"
|
|
54
234
|
end
|
|
235
|
+
col
|
|
55
236
|
end
|
|
56
237
|
end
|
|
57
238
|
|
|
@@ -63,15 +244,35 @@ end
|
|
|
63
244
|
# aggregate -> declarative per-column reductions into a new frame
|
|
64
245
|
# table { |g| }-> cross-column Ruby escape, g is a per-group view-frame
|
|
65
246
|
class GroupedFrame
|
|
247
|
+
include CAFrame::ColumnVerbs
|
|
66
248
|
# +key_names+ are the frame columns the grouping was keyed on. They become
|
|
67
249
|
# the result's index, so the reduction shortcuts must not also return them as
|
|
68
250
|
# reduced columns; an external CArray key contributes no name.
|
|
69
|
-
|
|
251
|
+
#
|
|
252
|
+
# The result's index is +index:+ when given (one entry per group, in code
|
|
253
|
+
# order); otherwise, for a single +key:+, the key's value at each group's
|
|
254
|
+
# first row, so it keeps the key's data type and Face; otherwise an object
|
|
255
|
+
# array of the labels.
|
|
256
|
+
#
|
|
257
|
+
# With several keys the result has no index: +key_columns:+ (name => the
|
|
258
|
+
# key, one value per row) become its first columns, each holding the key's
|
|
259
|
+
# value at each group's first row; +label_columns:+ (name => one value per
|
|
260
|
+
# group, in code order) give them directly, for groups that may have no
|
|
261
|
+
# rows (resample with fill: true).
|
|
262
|
+
#
|
|
263
|
+
# The grouping and the index are taken here, so a later change to the key
|
|
264
|
+
# does not rename the groups; the values are read when a reduction is.
|
|
265
|
+
def initialize(frame, cat, axis_name, key_names = [], index: nil, key: nil,
|
|
266
|
+
key_columns: nil, label_columns: nil)
|
|
70
267
|
@frame = frame
|
|
71
268
|
@cat = cat
|
|
72
269
|
@axis_name = axis_name
|
|
73
270
|
@key_names = key_names
|
|
74
271
|
@labels = cat.labels # group values, in code order
|
|
272
|
+
@index = index ||
|
|
273
|
+
(key && CAFrame.__send__(:key_labels, key, key.project(first_rows)))
|
|
274
|
+
@label_columns = label_columns ||
|
|
275
|
+
key_columns&.transform_values { |col| CAFrame.__send__(:key_labels, col, col.project(first_rows)) }
|
|
75
276
|
end
|
|
76
277
|
|
|
77
278
|
# Number of groups.
|
|
@@ -86,74 +287,324 @@ class GroupedFrame
|
|
|
86
287
|
|
|
87
288
|
# Raw exposure: the CArray group iterator for one column (memo §11.6).
|
|
88
289
|
def [](name)
|
|
290
|
+
refuse_changed_rows("[]")
|
|
89
291
|
@frame[name].group_by_category(@cat)
|
|
90
292
|
end
|
|
91
293
|
|
|
92
294
|
# Declarative aggregation (memo §11.6). Spec maps an output column name to
|
|
93
295
|
# +[input_column, reduction]+, where reduction is a Symbol (vectorized,
|
|
94
296
|
# applied through the group iterator) or a Proc (per-group custom, called
|
|
95
|
-
# with the group's column slice).
|
|
96
|
-
|
|
297
|
+
# with the group's column slice). A Symbol reduction takes its arguments
|
|
298
|
+
# after it, as in a call: +["temp", :percentile, 90.0]+, and its keywords
|
|
299
|
+
# last: +["temp", :mean, min_count: 6]+.
|
|
300
|
+
#
|
|
301
|
+
# With +keep_rows: true+ the rows are not collapsed: each row of the frame
|
|
302
|
+
# gets the result of its own group, so the result has the frame's rows and
|
|
303
|
+
# index, and a row whose key is masked (in no group) is UNDEF. The same
|
|
304
|
+
# keyword works for +table+ and the reductions below.
|
|
305
|
+
#
|
|
306
|
+
# df.group_by("station").aggregate("temp_mean" => ["temp", :mean], keep_rows: true)
|
|
307
|
+
def aggregate(spec = nil, keep_rows: false, **named)
|
|
308
|
+
refuse_changed_rows("aggregate")
|
|
309
|
+
spec = (spec || {}).merge(named)
|
|
97
310
|
cols = {}
|
|
98
|
-
spec.each do |out_name, (in_name, reduction)|
|
|
99
|
-
out = out_name
|
|
311
|
+
spec.each do |out_name, (in_name, reduction, *args)|
|
|
312
|
+
out = @frame.__send__(:column_name_arg, out_name, "aggregate")
|
|
313
|
+
@frame.__send__(:column_key, in_name, "aggregate")
|
|
314
|
+
options = args.last.is_a?(Hash) ? args.pop : {}
|
|
100
315
|
cols[out] =
|
|
101
316
|
case reduction
|
|
102
317
|
when Symbol
|
|
103
|
-
|
|
318
|
+
group_reduce(@frame[in_name], reduction, *args, **options)
|
|
104
319
|
when Proc
|
|
320
|
+
unless args.empty? && options.empty?
|
|
321
|
+
raise ArgumentError, "aggregate: a Proc reduction takes no arguments (#{out.inspect})"
|
|
322
|
+
end
|
|
105
323
|
per_group_column(in_name, reduction)
|
|
106
324
|
else
|
|
107
325
|
raise ArgumentError,
|
|
108
326
|
"reduction must be a Symbol or Proc (got #{reduction.class})"
|
|
109
327
|
end
|
|
110
328
|
end
|
|
111
|
-
|
|
329
|
+
result_frame(cols, keep_rows)
|
|
112
330
|
end
|
|
113
331
|
|
|
114
332
|
# Cross-column Ruby escape (memo §11.6). The block receives a per-group
|
|
115
333
|
# view-frame and returns a Hash of output-name => value; the values are
|
|
116
|
-
# collected column-wise across groups into a new frame.
|
|
117
|
-
|
|
118
|
-
|
|
119
|
-
|
|
334
|
+
# collected column-wise across groups into a new frame. +keep_rows: true+
|
|
335
|
+
# gives each row its group's values, as for +aggregate+.
|
|
336
|
+
#
|
|
337
|
+
# The columns are the names any group's Hash has, in the order they
|
|
338
|
+
# first appear; a group whose Hash lacks a name is UNDEF there, as
|
|
339
|
+
# +from_records+ reads a record that lacks a key.
|
|
340
|
+
def table(keep_rows: false)
|
|
341
|
+
refuse_changed_rows("table")
|
|
342
|
+
outs = []
|
|
120
343
|
each_group_frame do |g|
|
|
121
344
|
out = yield(g)
|
|
122
345
|
unless out.is_a?(Hash)
|
|
123
346
|
raise ArgumentError, "table block must return a Hash (got #{out.class})"
|
|
124
347
|
end
|
|
125
|
-
|
|
126
|
-
|
|
348
|
+
out.each_key { |k| @frame.__send__(:column_name_arg, k, "table") }
|
|
349
|
+
outs << out
|
|
127
350
|
end
|
|
351
|
+
names = CAFrame.__send__(:record_key_union, outs)
|
|
128
352
|
cols = {}
|
|
129
|
-
|
|
130
|
-
|
|
131
|
-
cols[name] = CArray.object(vals.size) { |i| vals[i] }
|
|
353
|
+
names.each do |name|
|
|
354
|
+
cols[name] = column_of_values(outs.map { |out| out.fetch(name, nil) })
|
|
132
355
|
end
|
|
133
|
-
|
|
356
|
+
result_frame(cols, keep_rows)
|
|
134
357
|
end
|
|
135
358
|
|
|
136
|
-
# Convenience reductions over every
|
|
137
|
-
#
|
|
359
|
+
# Convenience reductions over every column that defines the reduction. A
|
|
360
|
+
# column is in the result when its type answers the reduction -- a time
|
|
361
|
+
# column has a mean, a minimum and a maximum but no sum, a string column a
|
|
362
|
+
# minimum and a maximum only -- and left out when it does not, as are the
|
|
363
|
+
# key columns. An N-D column is reduced along the rows, so each group keeps
|
|
364
|
+
# its trailing shape: a (N, L) column gives (groups, L). Each
|
|
365
|
+
# takes +min_count:+ and +fill_value:+ as a core reduction does: a group
|
|
366
|
+
# with fewer than min_count present values is UNDEF, and fill_value fills
|
|
367
|
+
# the UNDEF cells. +keep_rows: true+ gives each row its group's value
|
|
368
|
+
# instead of one row per group, as for +aggregate+.
|
|
138
369
|
#
|
|
139
|
-
#
|
|
140
|
-
#
|
|
141
|
-
#
|
|
142
|
-
#
|
|
143
|
-
#
|
|
144
|
-
#
|
|
145
|
-
#
|
|
370
|
+
# Given column names, they reduce those columns only and return them as
|
|
371
|
+
# +df[...]+ does: one name gives the CArray, several an Array of them.
|
|
372
|
+
#
|
|
373
|
+
# grp.mean # a frame, one row per group
|
|
374
|
+
# grp.mean("temp") # CArray, one value per group
|
|
375
|
+
# df["temp"] - grp.mean("temp", keep_rows: true) # anomaly from the group mean
|
|
376
|
+
#
|
|
377
|
+
# @!method sum(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
378
|
+
# Returns a frame of the per-group sum of every column whose type has a
|
|
379
|
+
# sum, an N-D one per group along the rows. Other columns are left out.
|
|
380
|
+
# @return [CAFrame, CArray, Array<CArray>] a frame with one row per
|
|
381
|
+
# group, indexed by the group labels, or with keep_rows: true the
|
|
382
|
+
# frame's rows and index; given names, the CArray (one) or the Array of
|
|
383
|
+
# them (several).
|
|
384
|
+
# @!method mean(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
385
|
+
# Returns a frame of the per-group mean of every column whose type has
|
|
386
|
+
# a mean, as {#sum} does.
|
|
387
|
+
# @return [CAFrame] one row per group.
|
|
388
|
+
# @!method min(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
389
|
+
# Returns a frame of the per-group minimum of every column whose type has
|
|
390
|
+
# a minimum, as {#sum} does.
|
|
146
391
|
# @return [CAFrame] one row per group.
|
|
147
|
-
# @!method
|
|
148
|
-
# Returns a frame of the per-group
|
|
149
|
-
#
|
|
392
|
+
# @!method max(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
393
|
+
# Returns a frame of the per-group maximum of every column whose type has
|
|
394
|
+
# a maximum, as {#sum} does.
|
|
150
395
|
# @return [CAFrame] one row per group.
|
|
151
|
-
# @!method
|
|
152
|
-
# Returns
|
|
153
|
-
# one-dimensional column, as {#sum} does.
|
|
396
|
+
# @!method prod(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
397
|
+
# Returns the per-group product, as {#sum} does.
|
|
154
398
|
# @return [CAFrame] one row per group.
|
|
155
|
-
|
|
156
|
-
|
|
399
|
+
# @!method accumulate(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
400
|
+
# Returns the per-group sum kept in each column's own data type, as
|
|
401
|
+
# +CArray#accumulate+, as {#sum} does.
|
|
402
|
+
# @return [CAFrame] one row per group.
|
|
403
|
+
# @!method median(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
404
|
+
# Returns the per-group median, as {#sum} does.
|
|
405
|
+
# @return [CAFrame] one row per group.
|
|
406
|
+
# @!method variance(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
407
|
+
# Returns the per-group sample variance (divisor n - 1), as {#sum} does.
|
|
408
|
+
# @return [CAFrame] one row per group.
|
|
409
|
+
# @!method stddev(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
410
|
+
# Returns the per-group sample standard deviation, as {#sum} does.
|
|
411
|
+
# @return [CAFrame] one row per group.
|
|
412
|
+
# @!method variancep(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
413
|
+
# Returns the per-group population variance (divisor n), as {#sum} does.
|
|
414
|
+
# @return [CAFrame] one row per group.
|
|
415
|
+
# @!method stddevp(*names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
416
|
+
# Returns the per-group population standard deviation, as {#sum} does.
|
|
417
|
+
# @return [CAFrame] one row per group.
|
|
418
|
+
CArray.send(:define_named_methods, self,
|
|
419
|
+
[:sum, :mean, :min, :max, :prod, :accumulate, :median,
|
|
420
|
+
:variance, :stddev, :variancep, :stddevp], :group_reduction)
|
|
421
|
+
|
|
422
|
+
private def group_reduction (red, *names, min_count: nil, fill_value: nil, keep_rows: false)
|
|
423
|
+
refuse_changed_rows(red)
|
|
424
|
+
reduce_columns(red, names, keep_rows, min_count: min_count, fill_value: fill_value)
|
|
425
|
+
end
|
|
426
|
+
|
|
427
|
+
# The same convenience for the reductions that take no min_count: or
|
|
428
|
+
# fill_value:, as the core ones take none: a value of the group (first,
|
|
429
|
+
# last), a count (nunique, count) or a boolean fold (all, any).
|
|
430
|
+
#
|
|
431
|
+
# @!method first(*names, keep_rows: false)
|
|
432
|
+
# Returns each group's first present value in row order, UNDEF for a
|
|
433
|
+
# group with none, as {#sum} returns its sums.
|
|
434
|
+
# @return [CAFrame] one row per group.
|
|
435
|
+
# @!method last(*names, keep_rows: false)
|
|
436
|
+
# Returns each group's last present value in row order.
|
|
437
|
+
# @return [CAFrame] one row per group.
|
|
438
|
+
# @!method nunique(*names, keep_rows: false)
|
|
439
|
+
# Returns each group's number of distinct present values (int64).
|
|
440
|
+
# @return [CAFrame] one row per group.
|
|
441
|
+
# @!method count(*names, keep_rows: false)
|
|
442
|
+
# Returns each group's number of present values (int64), a masked cell
|
|
443
|
+
# left out.
|
|
444
|
+
# @return [CAFrame] one row per group.
|
|
445
|
+
# @!method all(*names, keep_rows: false)
|
|
446
|
+
# Returns whether every present value of the group is true, for the
|
|
447
|
+
# boolean columns.
|
|
448
|
+
# @return [CAFrame] one row per group.
|
|
449
|
+
# @!method any(*names, keep_rows: false)
|
|
450
|
+
# Returns whether any present value of the group is true, for the
|
|
451
|
+
# boolean columns.
|
|
452
|
+
# @return [CAFrame] one row per group.
|
|
453
|
+
CArray.send(:define_named_methods, self,
|
|
454
|
+
[:first, :last, :nunique, :count, :all, :any], :group_value)
|
|
455
|
+
|
|
456
|
+
private def group_value (red, *names, keep_rows: false)
|
|
457
|
+
refuse_changed_rows(red)
|
|
458
|
+
reduce_columns(red, names, keep_rows)
|
|
459
|
+
end
|
|
460
|
+
|
|
461
|
+
# Values computed within each group and kept on the frame's rows, in row
|
|
462
|
+
# order: the value some rows back in the same group, a rank among the
|
|
463
|
+
# group's rows, a running statistic. A row in no group is UNDEF. Without
|
|
464
|
+
# names they give a frame of every column whose type has the operation
|
|
465
|
+
# (the key columns left out), on the frame's rows and index; given names,
|
|
466
|
+
# the CArray (one) or the Array of them (several), as +df[...]+ returns
|
|
467
|
+
# columns. An N-D column runs along the rows.
|
|
468
|
+
#
|
|
469
|
+
# df["dtemp"] = df["temp"] - grp.lag("temp") # change since the station's previous row
|
|
470
|
+
# grp.order("temp", descending: true) # rank within the station
|
|
471
|
+
# grp.cumsum("rain") # running total per station
|
|
472
|
+
#
|
|
473
|
+
# "Previous" is the previous row of the frame: sort the frame first
|
|
474
|
+
# (+sort_by_key("time")+) when its rows are not in time order.
|
|
475
|
+
#
|
|
476
|
+
# @!method lag(*names, n: 1)
|
|
477
|
+
# Returns each row's value +n+ rows back in its own group, UNDEF where
|
|
478
|
+
# the group has none, as +CArray#lag+; a negative +n+ looks ahead.
|
|
479
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
480
|
+
# @!method order(*names, descending: false, method: :ordinal, kind: :quick)
|
|
481
|
+
# Returns each row's rank among its group's rows (int64, 0 the
|
|
482
|
+
# smallest), as +CArray#order+ ranks them.
|
|
483
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
484
|
+
# @!method cumsum(*names)
|
|
485
|
+
# Returns the running sum within each group, as +CArray#cumsum+.
|
|
486
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
487
|
+
# @!method cumprod(*names)
|
|
488
|
+
# Returns the running product within each group.
|
|
489
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
490
|
+
# @!method cummax(*names)
|
|
491
|
+
# Returns the running maximum within each group.
|
|
492
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
493
|
+
# @!method cummin(*names)
|
|
494
|
+
# Returns the running minimum within each group.
|
|
495
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
496
|
+
# @!method cumcount(*names)
|
|
497
|
+
# Returns the running count of present values within each group (int64).
|
|
498
|
+
# @return [CAFrame, CArray, Array<CArray>]
|
|
499
|
+
def lag (*names, n: 1)
|
|
500
|
+
transform_columns(:lag, names, [n], {})
|
|
501
|
+
end
|
|
502
|
+
|
|
503
|
+
def order (*names, descending: false, method: :ordinal, kind: :quick)
|
|
504
|
+
transform_columns(:order, names, [], { descending: descending, method: method, kind: kind })
|
|
505
|
+
end
|
|
506
|
+
|
|
507
|
+
CArray.send(:define_named_methods, self,
|
|
508
|
+
[:cumsum, :cumprod, :cummax, :cummin, :cumcount], :group_scan)
|
|
509
|
+
|
|
510
|
+
private def group_scan (op, *names)
|
|
511
|
+
transform_columns(op, names, [], {})
|
|
512
|
+
end
|
|
513
|
+
|
|
514
|
+
# Fill the masked cells of a column from the rows of the same group, in
|
|
515
|
+
# place, as +CAFrame#fill+ does for the whole column: +:ffill+ carries the
|
|
516
|
+
# group's last present value forward in row order, +:bfill+ its next one
|
|
517
|
+
# back. A fill never reaches across into another group, so a cell with
|
|
518
|
+
# nothing to carry in its group stays masked, and a row whose key is
|
|
519
|
+
# masked (in no group) is left as it is. A constant fills every masked
|
|
520
|
+
# cell, as +CAFrame#fill+ does. Returns self.
|
|
521
|
+
#
|
|
522
|
+
# df.group_by("station").fill("temp", :ffill)
|
|
523
|
+
#
|
|
524
|
+
# Sort the frame first (+sort_by_key("time")+) when its rows are not in
|
|
525
|
+
# time order.
|
|
526
|
+
#
|
|
527
|
+
# @param name [String] the column.
|
|
528
|
+
# @param method_or_value [Symbol, Object] +:ffill+, +:bfill+, or a constant.
|
|
529
|
+
# @return [GroupedFrame] self
|
|
530
|
+
# @raise [ArgumentError] for +:linear+, which within groups is not
|
|
531
|
+
# provided, or another Symbol.
|
|
532
|
+
def fill (name, method_or_value)
|
|
533
|
+
refuse_changed_rows("fill")
|
|
534
|
+
case method_or_value
|
|
535
|
+
when :ffill, :bfill
|
|
536
|
+
@frame.__send__(:refuse_if_frozen)
|
|
537
|
+
key = @frame.__send__(:column_key, name, "fill")
|
|
538
|
+
col = @frame[key]
|
|
539
|
+
# A row in no group is UNDEF in the fill, so writing it changes nothing.
|
|
540
|
+
held = group_transform(col, :strip_mask, [], { method: method_or_value })
|
|
541
|
+
target = col.is_masked
|
|
542
|
+
col[target] = held[target] if target.any
|
|
543
|
+
when :linear
|
|
544
|
+
raise ArgumentError,
|
|
545
|
+
"fill(#{name.inspect}, :linear): an interpolation within each group " \
|
|
546
|
+
"is not provided; use :ffill or :bfill, or interpolate one group at a " \
|
|
547
|
+
"time with CAFrame#fill"
|
|
548
|
+
when Symbol
|
|
549
|
+
raise ArgumentError,
|
|
550
|
+
"fill: unknown method #{method_or_value.inspect} " \
|
|
551
|
+
"(:ffill | :bfill, or a constant fill value)"
|
|
552
|
+
else
|
|
553
|
+
@frame.fill(name, method_or_value)
|
|
554
|
+
end
|
|
555
|
+
self
|
|
556
|
+
end
|
|
557
|
+
|
|
558
|
+
# Keep the rows of the groups the block chooses. The block receives the
|
|
559
|
+
# grouped frame and returns a boolean CArray with one value per group,
|
|
560
|
+
# built from the group reductions, as +CAFrame#filter+'s block returns one
|
|
561
|
+
# per row:
|
|
562
|
+
#
|
|
563
|
+
# grp.filter { |g| g["temp"].count_not_masked >= 20 } # stations with 20 readings
|
|
564
|
+
# grp.filter { |g| g.mean("temp") > 15.0 }
|
|
565
|
+
#
|
|
566
|
+
# The rows of a chosen group are kept in the frame's order, as a sub-frame
|
|
567
|
+
# sharing the frame's columns. A group whose value is UNDEF is
|
|
568
|
+
# undetermined, as is a row whose key is masked (it belongs to no group):
|
|
569
|
+
# such rows are dropped, or with +keep_masked: true+ carried with their
|
|
570
|
+
# cells masked, as +CAFrame#filter+ does.
|
|
571
|
+
#
|
|
572
|
+
# @param keep_masked [Boolean] carry the undetermined rows forward masked.
|
|
573
|
+
# @yieldparam grouped [GroupedFrame] self.
|
|
574
|
+
# @yieldreturn [CArray] boolean, one value per group.
|
|
575
|
+
# @return [CAFrame]
|
|
576
|
+
# @raise [ArgumentError] when the block does not return a boolean CArray of
|
|
577
|
+
# shape [ngroup].
|
|
578
|
+
def filter (keep_masked: false)
|
|
579
|
+
refuse_changed_rows("filter")
|
|
580
|
+
chosen = yield(self)
|
|
581
|
+
unless chosen.is_a?(CArray) && chosen.data_type == :boolean
|
|
582
|
+
raise ArgumentError,
|
|
583
|
+
"filter block must return a boolean CArray (got #{chosen.is_a?(CArray) ? "a #{CArray::Inspector.type_label(chosen)} CArray" : chosen.class})"
|
|
584
|
+
end
|
|
585
|
+
unless chosen.shape == [ngroup]
|
|
586
|
+
raise ArgumentError,
|
|
587
|
+
"filter mask has shape #{chosen.shape.inspect}, " \
|
|
588
|
+
"expected [#{ngroup}] (one value per group)"
|
|
589
|
+
end
|
|
590
|
+
rows = spread_to_rows(chosen)
|
|
591
|
+
@frame.filter(keep_masked: keep_masked) { rows }
|
|
592
|
+
end
|
|
593
|
+
|
|
594
|
+
# Returns the grouped rows as a frame: the frame the grouping was made
|
|
595
|
+
# from, its rows, columns and index, as a new frame sharing its columns.
|
|
596
|
+
# Nothing is copied, so a write to a cell reaches the grouped frame's
|
|
597
|
+
# rows; adding or dropping a column changes the new frame only.
|
|
598
|
+
#
|
|
599
|
+
# def warm_stations (grp)
|
|
600
|
+
# grp.filter { |g| g.mean("temp") > 15.0 } # the rows of some groups
|
|
601
|
+
# end
|
|
602
|
+
# grp.to_frame # all of its rows
|
|
603
|
+
#
|
|
604
|
+
# @return [CAFrame]
|
|
605
|
+
def to_frame
|
|
606
|
+
refuse_changed_rows("to_frame")
|
|
607
|
+
@frame.__send__(:rebuild, @frame.column_names.to_h { |name| [name, @frame[name]] })
|
|
157
608
|
end
|
|
158
609
|
|
|
159
610
|
# @return [String]
|
|
@@ -161,32 +612,106 @@ class GroupedFrame
|
|
|
161
612
|
"#<GroupedFrame ngroup=#{ngroup} by=#{@axis_name.inspect}>"
|
|
162
613
|
end
|
|
163
614
|
|
|
615
|
+
# A within-group transform of the named columns, or of every column whose
|
|
616
|
+
# type has it. The arguments are checked by the core first: below, a
|
|
617
|
+
# refusal reads as "this type has no such operation", and a wrong keyword
|
|
618
|
+
# would otherwise leave every column out without a word.
|
|
619
|
+
private def transform_columns(op, names, args, keywords)
|
|
620
|
+
refuse_changed_rows(op)
|
|
621
|
+
CArray.float64(1).public_send(op, *args, **keywords)
|
|
622
|
+
out = over_named_columns(op, names, @key_names, args, keywords) do |col|
|
|
623
|
+
group_transform(col, op, args, keywords)
|
|
624
|
+
end
|
|
625
|
+
return out unless names.empty?
|
|
626
|
+
CAFrame.new(out, axis_name: @frame.axis_name, index: @frame.index)
|
|
627
|
+
end
|
|
628
|
+
|
|
629
|
+
# A column's within-group transform: an N-D column runs along the rows.
|
|
630
|
+
private def group_transform(col, op, args, keywords)
|
|
631
|
+
it = col.group_by_category(@cat)
|
|
632
|
+
keywords = keywords.merge(axis: 0) if col.ndim > 1
|
|
633
|
+
it.public_send(op, *args, **keywords)
|
|
634
|
+
end
|
|
635
|
+
|
|
636
|
+
# Each result gets its own index.
|
|
164
637
|
private def label_index
|
|
638
|
+
return @index.copy if @index
|
|
165
639
|
CArray.object(@labels.size) { |i| @labels[i] }
|
|
166
640
|
end
|
|
167
641
|
|
|
168
|
-
|
|
169
|
-
|
|
642
|
+
# A key column is the index here, not a result column. Named columns
|
|
643
|
+
# come back as df[...] returns them, each on the frame's rows with
|
|
644
|
+
# +keep_rows+.
|
|
645
|
+
private def reduce_columns(reduction, names, keep_rows, **keywords)
|
|
646
|
+
keywords = keywords.compact
|
|
647
|
+
out = over_named_columns(reduction, names, @key_names) do |col|
|
|
648
|
+
col = group_reduce(col, reduction, **keywords)
|
|
649
|
+
keep_rows && !names.empty? ? spread_to_rows(col) : col
|
|
650
|
+
end
|
|
651
|
+
return out unless names.empty?
|
|
652
|
+
result_frame(out, keep_rows)
|
|
653
|
+
end
|
|
170
654
|
|
|
171
|
-
|
|
172
|
-
|
|
173
|
-
|
|
174
|
-
|
|
175
|
-
|
|
176
|
-
|
|
177
|
-
|
|
178
|
-
|
|
179
|
-
|
|
180
|
-
|
|
181
|
-
|
|
655
|
+
# One row per group, indexed by the labels; or, with +keep_rows+, the
|
|
656
|
+
# frame's rows, each holding its group's result.
|
|
657
|
+
private def result_frame(cols, keep_rows)
|
|
658
|
+
unless keep_rows
|
|
659
|
+
return CAFrame.new(cols, axis_name: @axis_name, index: label_index) unless @label_columns
|
|
660
|
+
clash = cols.keys & @label_columns.keys
|
|
661
|
+
unless clash.empty?
|
|
662
|
+
raise ArgumentError,
|
|
663
|
+
"a result column has the name of a key column: #{clash.map(&:inspect).join(', ')}"
|
|
664
|
+
end
|
|
665
|
+
return CAFrame.new(@label_columns.transform_values(&:copy).merge(cols))
|
|
666
|
+
end
|
|
667
|
+
CAFrame.new(cols.transform_values { |col| spread_to_rows(col) },
|
|
668
|
+
axis_name: @frame.axis_name, index: @frame.index)
|
|
669
|
+
end
|
|
670
|
+
|
|
671
|
+
# A per-group result (one entry per group along axis 0) laid back over the
|
|
672
|
+
# frame's rows through the group codes. A row in no group is UNDEF.
|
|
673
|
+
private def spread_to_rows(result)
|
|
674
|
+
# A row in no group has a masked index cell, which x[i] answers as a
|
|
675
|
+
# hole: so even with no group at all, the result keeps its type.
|
|
676
|
+
codes = group_codes
|
|
677
|
+
index = codes.value.int64
|
|
678
|
+
index[codes.is_masked] = UNDEF
|
|
679
|
+
result[index, *[nil] * (result.ndim - 1)].copy
|
|
680
|
+
end
|
|
681
|
+
|
|
682
|
+
# A column's group reduction. An N-D column is reduced along the rows, so
|
|
683
|
+
# each group keeps the trailing shape: a profile column (N, L) gives (G, L).
|
|
684
|
+
private def group_reduce(col, reduction, *args, **keywords)
|
|
685
|
+
it = col.group_by_category(@cat)
|
|
686
|
+
if col.ndim > 1 && !keywords.key?(:axis)
|
|
687
|
+
it.public_send(reduction, *args, axis: 0, **keywords)
|
|
688
|
+
else
|
|
689
|
+
it.public_send(reduction, *args, **keywords)
|
|
182
690
|
end
|
|
183
|
-
CAFrame.new(cols, axis_name: @axis_name, index: label_index)
|
|
184
691
|
end
|
|
185
692
|
|
|
186
693
|
private def per_group_column(in_name, proc)
|
|
187
694
|
results = []
|
|
188
695
|
each_group_slice(in_name) { |slice| results << proc.call(slice) }
|
|
189
|
-
|
|
696
|
+
column_of_values(results)
|
|
697
|
+
end
|
|
698
|
+
|
|
699
|
+
# The grouping holds one code per row of the frame as it was when grouped.
|
|
700
|
+
# A frame whose row count changed since (a splice, a deletion) has rows
|
|
701
|
+
# the grouping does not know, so every verb refuses it.
|
|
702
|
+
private def refuse_changed_rows(verb)
|
|
703
|
+
return if @frame.nrow == @cat.elements
|
|
704
|
+
raise ArgumentError,
|
|
705
|
+
"#{verb}: the frame has #{@frame.nrow} rows, #{@cat.elements} when it " \
|
|
706
|
+
"was grouped; group it again"
|
|
707
|
+
end
|
|
708
|
+
|
|
709
|
+
# A column of the Ruby values the groups gave, typed as from_records types
|
|
710
|
+
# a record's values: Integers int64, numbers float64, Strings text, time
|
|
711
|
+
# elements a time column, arrays of one shape an N-D column, anything else
|
|
712
|
+
# object. UNDEF and nil are missing.
|
|
713
|
+
private def column_of_values(values)
|
|
714
|
+
CAFrame.__send__(:build_record_column, values, values.size)
|
|
190
715
|
end
|
|
191
716
|
|
|
192
717
|
private def each_group_slice(in_name)
|
|
@@ -200,20 +725,36 @@ class GroupedFrame
|
|
|
200
725
|
ngroup.times { |k| yield @frame[group_address(k)] }
|
|
201
726
|
end
|
|
202
727
|
|
|
728
|
+
# The first row of each group, in code order.
|
|
729
|
+
# With few groups each row's number is folded into its group's slot by the
|
|
730
|
+
# smallest, which needs no sort of the rows (a numeric column then reduces
|
|
731
|
+
# without one too); a row in no group (masked code) is in no slot, and a
|
|
732
|
+
# group without rows keeps no row (UNDEF). With more groups the columns
|
|
733
|
+
# are gathered through the sort anyway, so the first rows are read off it.
|
|
734
|
+
private def first_rows
|
|
735
|
+
if ngroup > CACategoricalIterator::SCATTER_CATEGORIES_MAX
|
|
736
|
+
return group_perm[group_bounds[0...ngroup]]
|
|
737
|
+
end
|
|
738
|
+
n = @cat.elements
|
|
739
|
+
first = CArray.int64(ngroup).fill(n)
|
|
740
|
+
first.scatter_min!(@cat.codes, CArray.int64(n).seq!)
|
|
741
|
+
first[first.eq(n)] = UNDEF if ngroup > 0
|
|
742
|
+
first
|
|
743
|
+
end
|
|
744
|
+
|
|
203
745
|
private def group_address(k)
|
|
204
|
-
|
|
205
|
-
group_perm[start...(start + group_sizes[k])]
|
|
746
|
+
group_perm[group_bounds[k]...group_bounds[k + 1]]
|
|
206
747
|
end
|
|
207
748
|
|
|
208
|
-
private def
|
|
209
|
-
@
|
|
749
|
+
private def group_codes
|
|
750
|
+
@cat.codes
|
|
210
751
|
end
|
|
211
752
|
|
|
212
|
-
private def
|
|
213
|
-
@
|
|
753
|
+
private def group_perm
|
|
754
|
+
@group_perm ||= @cat.sort_addr
|
|
214
755
|
end
|
|
215
756
|
|
|
216
|
-
private def
|
|
217
|
-
@
|
|
757
|
+
private def group_bounds
|
|
758
|
+
@group_bounds ||= CArray.segment_offsets(lengths: @cat.category_sizes)
|
|
218
759
|
end
|
|
219
760
|
end
|