carray 3.0.2 → 3.0.4

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Files changed (247) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +568 -0
  3. data/README.md +6 -6
  4. data/carray.gemspec +1 -1
  5. data/ext/ca_axis_descriptor.h +27 -24
  6. data/ext/ca_axis_dispatch.c +220 -0
  7. data/ext/ca_axis_group.c +201 -123
  8. data/ext/ca_binop_dispatch.c +46 -52
  9. data/ext/ca_binop_dispatch.h +1 -1
  10. data/ext/ca_categorical_iterator.c +249 -183
  11. data/ext/ca_compare.c +7 -12
  12. data/ext/ca_for_buffer.h +21 -68
  13. data/ext/ca_group_iter.c +38 -23
  14. data/ext/ca_kernel_iterator.c +1765 -2076
  15. data/ext/ca_kernel_iterator.h +584 -566
  16. data/ext/ca_monop_dispatch.c +86 -63
  17. data/ext/ca_monop_dispatch.h +5 -0
  18. data/ext/ca_obj_array.c +223 -56
  19. data/ext/ca_obj_bincmp.c +172 -138
  20. data/ext/ca_obj_binop.c +116 -230
  21. data/ext/ca_obj_bitarray.c +40 -26
  22. data/ext/ca_obj_bitfield.c +100 -68
  23. data/ext/ca_obj_block.c +19 -9
  24. data/ext/ca_obj_byte_swap.c +45 -46
  25. data/ext/ca_obj_const_string.c +269 -44
  26. data/ext/ca_obj_face.c +612 -89
  27. data/ext/ca_obj_face.h +111 -47
  28. data/ext/ca_obj_fake.c +36 -79
  29. data/ext/ca_obj_farray.c +7 -3
  30. data/ext/ca_obj_field.c +33 -8
  31. data/ext/ca_obj_fixlen_string.c +23 -24
  32. data/ext/ca_obj_grid.c +541 -210
  33. data/ext/ca_obj_meld.c +331 -111
  34. data/ext/ca_obj_moncmp.c +80 -65
  35. data/ext/ca_obj_monop.c +177 -149
  36. data/ext/ca_obj_object.c +664 -248
  37. data/ext/ca_obj_record.c +63 -23
  38. data/ext/ca_obj_reduce.c +18 -16
  39. data/ext/ca_obj_refer.c +140 -58
  40. data/ext/ca_obj_remap.c +85 -24
  41. data/ext/ca_obj_repeat.c +24 -9
  42. data/ext/ca_obj_roll.c +121 -16
  43. data/ext/ca_obj_select.c +61 -58
  44. data/ext/ca_obj_select_axis.c +73 -107
  45. data/ext/ca_obj_shift.c +32 -102
  46. data/ext/ca_obj_stack.c +372 -122
  47. data/ext/ca_obj_stride.c +348 -140
  48. data/ext/ca_obj_string.c +88 -22
  49. data/ext/ca_obj_tile.c +38 -21
  50. data/ext/ca_obj_time.c +45 -31
  51. data/ext/ca_obj_timedelta.c +43 -29
  52. data/ext/ca_obj_transpose.c +17 -6
  53. data/ext/ca_obj_triop.c +125 -141
  54. data/ext/ca_obj_window.c +330 -44
  55. data/ext/ca_op_ipower.c +24 -11
  56. data/ext/ca_op_powi.h +57 -30
  57. data/ext/ca_pow5_table.h +656 -0
  58. data/ext/ca_sort_kernels.h +70 -0
  59. data/ext/ca_sweep_engine.c +104 -81
  60. data/ext/ca_sweep_engine.h +7 -20
  61. data/ext/ca_triop_dispatch.c +4 -1
  62. data/ext/ca_triop_dispatch.h +5 -2
  63. data/ext/caframe_csv_reader.c +542 -0
  64. data/ext/carray.h +241 -92
  65. data/ext/carray_access.c +608 -276
  66. data/ext/carray_address_basis.c +494 -97
  67. data/ext/carray_attribute.c +129 -4
  68. data/ext/carray_bincount.c +39 -7
  69. data/ext/carray_broadcast.c +56 -19
  70. data/ext/carray_build_flags.h +1 -1
  71. data/ext/carray_call_cfunc.c +108 -28
  72. data/ext/carray_cast.c +1576 -223
  73. data/ext/carray_cast_func.rb +77 -24
  74. data/ext/carray_class.c +4 -3
  75. data/ext/carray_conversion.c +208 -75
  76. data/ext/carray_copy.c +82 -24
  77. data/ext/carray_core.c +646 -162
  78. data/ext/carray_count.c +171 -88
  79. data/ext/carray_element.c +94 -60
  80. data/ext/carray_factorize.c +670 -324
  81. data/ext/carray_generate.c +260 -83
  82. data/ext/carray_histogram.c +209 -106
  83. data/ext/carray_hold.c +14 -16
  84. data/ext/carray_index_classifier.c +422 -243
  85. data/ext/carray_internal.h +692 -3
  86. data/ext/carray_kernels_bincmp.c +7 -0
  87. data/ext/carray_kernels_binop.c +487 -120
  88. data/ext/carray_kernels_init.c +653 -50
  89. data/ext/carray_kernels_moncmp.c +15 -8
  90. data/ext/carray_kernels_monop.c +99 -43
  91. data/ext/carray_kernels_reduce_aggregate.c +3925 -6112
  92. data/ext/carray_kernels_reduce_boolean.c +112 -36
  93. data/ext/carray_kernels_reduce_cumulative.c +2127 -6903
  94. data/ext/carray_kernels_reduce_extreme.c +3032 -2892
  95. data/ext/carray_kernels_reduce_variance.c +439 -500
  96. data/ext/carray_kernels_scan.c +1097 -488
  97. data/ext/carray_kernels_search.c +3787 -2176
  98. data/ext/carray_kernels_sort.c +1200 -920
  99. data/ext/carray_kernels_triop.c +479 -7
  100. data/ext/carray_key_windows.c +216 -0
  101. data/ext/carray_lazy.c +967 -153
  102. data/ext/carray_loop.c +81 -65
  103. data/ext/carray_mask.c +910 -324
  104. data/ext/carray_math_kernel.h +1 -0
  105. data/ext/carray_median_percentile.c +299 -100
  106. data/ext/carray_memory_view.c +872 -758
  107. data/ext/carray_operator.c +1171 -364
  108. data/ext/carray_order.c +505 -133
  109. data/ext/carray_partition.c +112 -65
  110. data/ext/carray_random.c +327 -239
  111. data/ext/carray_round.c +273 -0
  112. data/ext/carray_scatter.c +346 -78
  113. data/ext/carray_segment.c +257 -0
  114. data/ext/carray_slab.c +249 -86
  115. data/ext/carray_sort.c +224 -227
  116. data/ext/carray_sort_kernel.c +8 -1
  117. data/ext/carray_struct.c +118 -39
  118. data/ext/carray_test.c +193 -69
  119. data/ext/carray_time_text.c +1182 -0
  120. data/ext/carray_undef.c +4 -0
  121. data/ext/carray_utils.c +579 -113
  122. data/ext/extconf.rb +27 -2
  123. data/ext/mk_call_cfunc.rb +19 -4
  124. data/ext/mk_pow5_table.rb +35 -0
  125. data/ext/mkkernel.rb +1202 -1014
  126. data/ext/ruby_carray.c +17 -5
  127. data/ext/version.h +4 -4
  128. data/ext/version.rb +4 -2
  129. data/lib/carray/attribute.rb +160 -17
  130. data/lib/carray/autoload_carray.rb +23 -27
  131. data/lib/carray/autoload_method_extension.rb +20 -5
  132. data/lib/carray/axis_group.rb +360 -63
  133. data/lib/carray/basics.rb +162 -28
  134. data/lib/carray/bincount_nd.rb +18 -2
  135. data/lib/carray/block_iterator.rb +231 -58
  136. data/lib/carray/boolean_reduce.rb +34 -42
  137. data/lib/carray/categorical.rb +242 -52
  138. data/lib/carray/categorical_iterator.rb +437 -827
  139. data/lib/carray/complex.rb +41 -34
  140. data/lib/carray/conditional.rb +150 -14
  141. data/lib/carray/const_string.rb +59 -4
  142. data/lib/carray/construct.rb +15 -11
  143. data/lib/carray/data_type_extension.rb +1 -0
  144. data/lib/carray/distance_limit.rb +77 -0
  145. data/lib/carray/fixlen_string.rb +7 -1
  146. data/lib/carray/frame/column_verbs.rb +70 -0
  147. data/lib/carray/frame/concat.rb +157 -6
  148. data/lib/carray/frame/convert.rb +82 -7
  149. data/lib/carray/frame/csv_parser.rb +688 -87
  150. data/lib/carray/frame/describe.rb +80 -0
  151. data/lib/carray/frame/frame.rb +369 -45
  152. data/lib/carray/frame/group.rb +631 -90
  153. data/lib/carray/frame/io.rb +506 -79
  154. data/lib/carray/frame/join.rb +411 -62
  155. data/lib/carray/frame/records.rb +116 -19
  156. data/lib/carray/frame/reshape.rb +455 -0
  157. data/lib/carray/frame/sort.rb +30 -18
  158. data/lib/carray/frame/verbs.rb +868 -61
  159. data/lib/carray/frame/windows.rb +117 -0
  160. data/lib/carray/frame.rb +4 -0
  161. data/lib/carray/fuse_source.rb +118 -2
  162. data/lib/carray/fusion.rb +257 -42
  163. data/lib/carray/histogram.rb +6 -1
  164. data/lib/carray/inspect.rb +54 -13
  165. data/lib/carray/iterator.rb +99 -9
  166. data/lib/carray/key_windows.rb +620 -0
  167. data/lib/carray/lazy.rb +216 -193
  168. data/lib/carray/mask_gap_fill.rb +112 -92
  169. data/lib/carray/math.rb +32 -19
  170. data/lib/carray/meld_reduce.rb +52 -21
  171. data/lib/carray/methods/align_addr.rb +8 -4
  172. data/lib/carray/methods/bin.rb +26 -18
  173. data/lib/carray/methods/bincount.rb +18 -2
  174. data/lib/carray/methods/bit_string.rb +15 -4
  175. data/lib/carray/methods/choose.rb +16 -3
  176. data/lib/carray/methods/composition.rb +18 -10
  177. data/lib/carray/methods/factorize.rb +2 -2
  178. data/lib/carray/methods/gather_nd.rb +25 -5
  179. data/lib/carray/methods/insert_block.rb +9 -14
  180. data/lib/carray/methods/is_between.rb +59 -0
  181. data/lib/carray/methods/is_in.rb +140 -10
  182. data/lib/carray/methods/join.rb +2 -7
  183. data/lib/carray/methods/lag.rb +49 -0
  184. data/lib/carray/methods/locate_addr.rb +182 -45
  185. data/lib/carray/methods/mode.rb +18 -1
  186. data/lib/carray/methods/nunique.rb +11 -6
  187. data/lib/carray/methods/repeat.rb +1 -20
  188. data/lib/carray/methods/resize.rb +21 -23
  189. data/lib/carray/methods/snap.rb +34 -12
  190. data/lib/carray/methods/unique.rb +11 -2
  191. data/lib/carray/methods/value_counts.rb +4 -11
  192. data/lib/carray/record_order.rb +208 -0
  193. data/lib/carray/rng.rb +3 -0
  194. data/lib/carray/runtime.rb +65 -17
  195. data/lib/carray/segment_iterator.rb +1221 -0
  196. data/lib/carray/serialize.rb +214 -30
  197. data/lib/carray/slab_iterator.rb +101 -27
  198. data/lib/carray/stack.rb +10 -4
  199. data/lib/carray/string.rb +105 -5
  200. data/lib/carray/string_operation_extension.rb +12 -4
  201. data/lib/carray/struct.rb +137 -58
  202. data/lib/carray/struct_builder.rb +124 -17
  203. data/lib/carray/time.rb +1222 -186
  204. data/lib/carray/window_iterator.rb +242 -81
  205. data/lib/carray.rb +9 -2
  206. data/yard-stubs/ca_obj_array.rb +4 -4
  207. data/yard-stubs/ca_obj_bitarray.rb +7 -0
  208. data/yard-stubs/ca_obj_bitfield.rb +23 -12
  209. data/yard-stubs/ca_obj_fake.rb +1 -1
  210. data/yard-stubs/ca_obj_field.rb +5 -1
  211. data/yard-stubs/ca_obj_grid.rb +21 -10
  212. data/yard-stubs/ca_obj_refer.rb +5 -4
  213. data/yard-stubs/ca_obj_roll.rb +2 -3
  214. data/yard-stubs/ca_obj_shift.rb +5 -1
  215. data/yard-stubs/ca_obj_stride.rb +10 -7
  216. data/yard-stubs/ca_obj_tile.rb +1 -1
  217. data/yard-stubs/ca_obj_transpose.rb +1 -1
  218. data/yard-stubs/ca_obj_window.rb +9 -5
  219. data/yard-stubs/carray_access.rb +11 -5
  220. data/yard-stubs/carray_attribute.rb +0 -5
  221. data/yard-stubs/carray_broadcast.rb +1 -1
  222. data/yard-stubs/carray_cast.rb +88 -43
  223. data/yard-stubs/carray_conversion.rb +15 -2
  224. data/yard-stubs/carray_copy.rb +12 -5
  225. data/yard-stubs/carray_core.rb +3 -3
  226. data/yard-stubs/carray_count.rb +9 -0
  227. data/yard-stubs/carray_element.rb +10 -4
  228. data/yard-stubs/carray_generate.rb +21 -1
  229. data/yard-stubs/carray_lazy.rb +5 -1
  230. data/yard-stubs/carray_loop.rb +4 -1
  231. data/yard-stubs/carray_mask.rb +60 -12
  232. data/yard-stubs/carray_math.rb +52 -14
  233. data/yard-stubs/carray_median_percentile.rb +15 -8
  234. data/yard-stubs/carray_memory_view.rb +40 -23
  235. data/yard-stubs/carray_order.rb +61 -29
  236. data/yard-stubs/carray_random.rb +13 -4
  237. data/yard-stubs/carray_scatter.rb +21 -9
  238. data/yard-stubs/carray_segment.rb +72 -0
  239. data/yard-stubs/carray_slab.rb +10 -2
  240. data/yard-stubs/carray_sort.rb +49 -8
  241. data/yard-stubs/carray_test.rb +15 -3
  242. data/yard-stubs/carray_utils.rb +0 -26
  243. metadata +19 -5
  244. data/ext/ca_for_each_element.h +0 -239
  245. data/ext/carray_kernels_map.c +0 -3467
  246. data/lib/carray/arrow_tensor.rb +0 -401
  247. data/lib/carray/table.rb +0 -108
@@ -0,0 +1,80 @@
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+ # CAFrame#describe: one row of statistics per column, for a first look at a
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+ # table that has just been read.
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+
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+ class CAFrame
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+ # Summarize the columns, one row each, as a new frame indexed by column
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+ # name:
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+ #
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+ # puts df.describe.to_table
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+ #
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+ # column type count masked unique min max mean stddev
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+ # ------- ------- ----- ------ ------ ---------- ---------- ---------- --------
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+ # station object 3 0 2 _ _ _ _
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+ # temp float64 2 1 2 19.0 22.1 20.55 2.192031
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+ # time CATime 3 0 3 2024-01-01 2024-01-03 2024-01-02 1D
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+ #
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+ # +type+ is the data type, or the Face's class for a Face column, with the
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+ # trailing shape of an N-D column in brackets (+float64[3]+). +count+ and
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+ # +masked+ count cells, so an N-D column counts every cell of every row;
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+ # +unique+ is the number of distinct values among the present cells.
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+ #
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+ # The other statistics apply only where the column's kind gives them a
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+ # meaning, and are UNDEF elsewhere:
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+ #
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+ # real numbers, boolean min max mean stddev
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+ # complex mean stddev (no order)
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+ # CATime, CATimedelta min max mean stddev (as times / durations)
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+ # anything else (text, categorical, records ...) unique only
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+ #
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+ # A boolean column counts true as 1, so its mean is the share of trues. A
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+ # column with no present cell has UNDEF statistics. The index is not a
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+ # column and is not summarized.
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+ #
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+ # @param names [Array<String>] the columns to summarize; default all.
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+ # @return [CAFrame] a new frame with one row per column.
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+ def describe(*names)
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+ names = names.empty? ? column_names : column_keys(names, "describe")
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+ rows = names.map { |name| describe_column(self[name]) }
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+ stats = %w[type count masked unique min max mean stddev]
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+ cols = stats.to_h do |stat|
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+ values = rows.map { |row| row[stat] }
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+ column =
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+ case stat
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+ when "count", "masked", "unique" then CArray.int64(values.size)
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+ else CArray.object(values.size)
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+ end
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+ column[] = UNDEF
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+ values.each_with_index { |v, i| column[i] = v unless UNDEF.equal?(v) }
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+ [stat, column]
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+ end
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+ CAFrame.new(cols, axis_name: "column", index: CA_OBJECT(names))
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+ end
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+
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+ DESCRIBE_TIME_FACES = %w[CATime CATimedelta].freeze
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+ Ractor.make_shareable(DESCRIBE_TIME_FACES)
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+ private_constant :DESCRIBE_TIME_FACES
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+
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+ private def describe_column(col)
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+ kind =
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+ if col.face?
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+ DESCRIBE_TIME_FACES.include?(col.class.name) ? :ordered : :other
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+ elsif col.complex?
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+ :complex
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+ elsif col.numeric? || col.boolean?
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+ :ordered
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+ else
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+ :other
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+ end
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+ type = CArray::Inspector.type_label(col)
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+ type += col.shape[1..].inspect if col.ndim > 1
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+ row = { "type" => type,
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+ "count" => col.count_not_masked, "masked" => col.count_masked,
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+ "unique" => col.nunique }
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+ ordered = kind == :ordered
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+ row["min"] = ordered ? col.min : UNDEF
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+ row["max"] = ordered ? col.max : UNDEF
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+ row["mean"] = kind == :other ? UNDEF : col.mean
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+ row["stddev"] = kind == :other ? UNDEF : col.stddev
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+ row
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+ end
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+ end