carray 1.3.6 → 1.5.3

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Files changed (315) hide show
  1. checksums.yaml +4 -4
  2. data/.yardopts +32 -0
  3. data/LICENSE +22 -0
  4. data/NEWS.md +65 -0
  5. data/README.md +23 -26
  6. data/Rakefile +31 -0
  7. data/TODO.md +17 -0
  8. data/carray.gemspec +24 -31
  9. data/{ca_iter_block.c → ext/ca_iter_block.c} +16 -18
  10. data/{ca_iter_dimension.c → ext/ca_iter_dimension.c} +20 -21
  11. data/{ca_iter_window.c → ext/ca_iter_window.c} +12 -14
  12. data/{ca_obj_array.c → ext/ca_obj_array.c} +451 -176
  13. data/{ca_obj_bitarray.c → ext/ca_obj_bitarray.c} +18 -23
  14. data/{ca_obj_bitfield.c → ext/ca_obj_bitfield.c} +12 -16
  15. data/{ca_obj_block.c → ext/ca_obj_block.c} +47 -54
  16. data/{ca_obj_fake.c → ext/ca_obj_fake.c} +10 -12
  17. data/{ca_obj_farray.c → ext/ca_obj_farray.c} +21 -23
  18. data/{ca_obj_field.c → ext/ca_obj_field.c} +30 -32
  19. data/{ca_obj_grid.c → ext/ca_obj_grid.c} +32 -33
  20. data/{ca_obj_mapping.c → ext/ca_obj_mapping.c} +11 -13
  21. data/{ca_obj_object.c → ext/ca_obj_object.c} +40 -42
  22. data/{ca_obj_reduce.c → ext/ca_obj_reduce.c} +3 -5
  23. data/{ca_obj_refer.c → ext/ca_obj_refer.c} +38 -40
  24. data/{ca_obj_repeat.c → ext/ca_obj_repeat.c} +45 -47
  25. data/{ca_obj_select.c → ext/ca_obj_select.c} +4 -6
  26. data/{ca_obj_shift.c → ext/ca_obj_shift.c} +26 -28
  27. data/{ca_obj_transpose.c → ext/ca_obj_transpose.c} +26 -28
  28. data/{ca_obj_unbound_repeat.c → ext/ca_obj_unbound_repeat.c} +106 -160
  29. data/{ca_obj_window.c → ext/ca_obj_window.c} +33 -35
  30. data/{carray.h → ext/carray.h} +90 -59
  31. data/{carray_access.c → ext/carray_access.c} +244 -109
  32. data/{carray_attribute.c → ext/carray_attribute.c} +161 -207
  33. data/{carray_call_cfunc.c → ext/carray_call_cfunc.c} +1 -3
  34. data/{carray_cast.c → ext/carray_cast.c} +350 -149
  35. data/{carray_cast_func.rb → ext/carray_cast_func.rb} +1 -2
  36. data/{carray_class.c → ext/carray_class.c} +28 -36
  37. data/{carray_conversion.c → ext/carray_conversion.c} +58 -70
  38. data/{carray_copy.c → ext/carray_copy.c} +34 -50
  39. data/{carray_core.c → ext/carray_core.c} +75 -62
  40. data/ext/carray_data_type.c +66 -0
  41. data/{carray_element.c → ext/carray_element.c} +34 -53
  42. data/{carray_generate.c → ext/carray_generate.c} +137 -50
  43. data/{carray_iterator.c → ext/carray_iterator.c} +53 -53
  44. data/{carray_loop.c → ext/carray_loop.c} +77 -106
  45. data/{carray_mask.c → ext/carray_mask.c} +95 -114
  46. data/{carray_math.rb → ext/carray_math.rb} +47 -31
  47. data/ext/{mathfunc/carray_mathfunc.c → carray_mathfunc.c} +1 -3
  48. data/{carray_numeric.c → ext/carray_numeric.c} +43 -46
  49. data/{carray_operator.c → ext/carray_operator.c} +72 -36
  50. data/{carray_order.c → ext/carray_order.c} +73 -217
  51. data/{carray_sort_addr.c → ext/carray_sort_addr.c} +14 -21
  52. data/{carray_stat.c → ext/carray_stat.c} +6 -8
  53. data/{carray_stat_proc.rb → ext/carray_stat_proc.rb} +25 -27
  54. data/{carray_test.c → ext/carray_test.c} +59 -51
  55. data/{carray_undef.c → ext/carray_undef.c} +1 -11
  56. data/{carray_utils.c → ext/carray_utils.c} +12 -4
  57. data/{extconf.rb → ext/extconf.rb} +1 -6
  58. data/{mkmath.rb → ext/mkmath.rb} +13 -3
  59. data/{ruby_carray.c → ext/ruby_carray.c} +20 -8
  60. data/{ruby_ccomplex.c → ext/ruby_ccomplex.c} +1 -3
  61. data/{ruby_float_func.c → ext/ruby_float_func.c} +1 -3
  62. data/ext/version.h +16 -0
  63. data/{version.rb → ext/version.rb} +0 -0
  64. data/lib/carray.rb +52 -10
  65. data/lib/carray/{base/autoload.rb → autoload.rb} +48 -8
  66. data/lib/carray/autoload/autoload_base.rb +1 -5
  67. data/lib/carray/autoload/autoload_gem_cairo.rb +9 -0
  68. data/lib/carray/autoload/autoload_gem_ffi.rb +9 -0
  69. data/lib/carray/autoload/autoload_gem_gnuplot.rb +2 -0
  70. data/lib/carray/autoload/autoload_gem_io_csv.rb +14 -0
  71. data/lib/carray/autoload/autoload_gem_io_pg.rb +6 -0
  72. data/lib/carray/autoload/autoload_gem_io_sqlite3.rb +12 -0
  73. data/lib/carray/autoload/autoload_gem_narray.rb +10 -0
  74. data/lib/carray/autoload/autoload_gem_numo_narray.rb +15 -0
  75. data/lib/carray/autoload/autoload_gem_opencv.rb +16 -0
  76. data/lib/carray/autoload/autoload_gem_random.rb +8 -0
  77. data/lib/carray/autoload/autoload_gem_rmagick.rb +23 -0
  78. data/lib/carray/autoload/{autoload_graphics_zimg.rb → autoload_gem_zimg.rb} +0 -0
  79. data/lib/carray/basic.rb +191 -0
  80. data/lib/carray/broadcast.rb +82 -0
  81. data/lib/carray/compose.rb +315 -0
  82. data/lib/carray/construct.rb +460 -0
  83. data/lib/carray/convert.rb +115 -0
  84. data/lib/carray/info.rb +1 -3
  85. data/lib/carray/{base/inspect.rb → inspect.rb} +9 -11
  86. data/lib/carray/io/imagemagick.rb +2 -4
  87. data/lib/carray/{base/iterator.rb → iterator.rb} +6 -6
  88. data/lib/carray/mask.rb +102 -0
  89. data/lib/carray/{base/math.rb → math.rb} +21 -53
  90. data/lib/carray/math/histogram.rb +8 -10
  91. data/lib/carray/math/recurrence.rb +1 -3
  92. data/lib/carray/mkmf.rb +9 -3
  93. data/lib/carray/object/ca_obj_iterator.rb +1 -3
  94. data/lib/carray/object/ca_obj_link.rb +1 -3
  95. data/lib/carray/object/ca_obj_pack.rb +9 -11
  96. data/lib/carray/obsolete.rb +270 -0
  97. data/lib/carray/ordering.rb +181 -0
  98. data/lib/carray/{base/serialize.rb → serialize.rb} +50 -66
  99. data/lib/carray/string.rb +188 -0
  100. data/lib/carray/{base/struct.rb → struct.rb} +19 -21
  101. data/lib/carray/{io/table.rb → table.rb} +1 -9
  102. data/lib/carray/testing.rb +51 -0
  103. data/lib/carray/time.rb +76 -0
  104. data/lib/carray/transform.rb +98 -0
  105. data/misc/Methods.ja.md +182 -0
  106. data/{NOTE → misc/NOTE} +0 -0
  107. data/spec/Classes/CABitfield_spec.rb +58 -0
  108. data/spec/Classes/CABlockIterator_spec.rb +114 -0
  109. data/spec/Classes/CABlock_spec.rb +205 -0
  110. data/spec/Classes/CAField_spec.rb +39 -0
  111. data/spec/Classes/CAGrid_spec.rb +75 -0
  112. data/spec/Classes/CAMap_spec.rb +0 -0
  113. data/{test/test_CAMapping.rb → spec/Classes/CAMapping_spec.rb} +35 -36
  114. data/spec/Classes/CAObject_attribute_spec.rb +33 -0
  115. data/spec/Classes/CAObject_spec.rb +33 -0
  116. data/spec/Classes/CARefer_spec.rb +93 -0
  117. data/spec/Classes/CARepeat_spec.rb +65 -0
  118. data/spec/Classes/CASelect_spec.rb +22 -0
  119. data/spec/Classes/CAShift_spec.rb +16 -0
  120. data/spec/Classes/CAStruct_spec.rb +71 -0
  121. data/{test/test_CATranspose.rb → spec/Classes/CATranspose_spec.rb} +20 -21
  122. data/spec/Classes/CAUnboudRepeat_spec.rb +102 -0
  123. data/spec/Classes/CAWindow_spec.rb +54 -0
  124. data/spec/Classes/CAWrap_spec.rb +8 -0
  125. data/{test/test_CArray.rb → spec/Classes/CArray_spec.rb} +48 -92
  126. data/spec/Classes/CScalar_spec.rb +55 -0
  127. data/spec/Features/feature_130_spec.rb +19 -0
  128. data/spec/Features/feature_attributes_spec.rb +280 -0
  129. data/spec/Features/feature_boolean_spec.rb +98 -0
  130. data/spec/Features/feature_broadcast.rb +116 -0
  131. data/spec/Features/feature_cast_function.rb +19 -0
  132. data/spec/Features/feature_cast_spec.rb +33 -0
  133. data/spec/Features/feature_class_spec.rb +84 -0
  134. data/spec/Features/feature_complex_spec.rb +42 -0
  135. data/{test/test_composite.rb → spec/Features/feature_composite_spec.rb} +17 -18
  136. data/spec/Features/feature_convert_spec.rb +46 -0
  137. data/spec/Features/feature_copy_spec.rb +123 -0
  138. data/spec/Features/feature_creation_spec.rb +84 -0
  139. data/spec/Features/feature_element_spec.rb +144 -0
  140. data/spec/Features/feature_extream_spec.rb +54 -0
  141. data/spec/Features/feature_generate_spec.rb +74 -0
  142. data/spec/Features/feature_index_spec.rb +69 -0
  143. data/spec/Features/feature_mask_spec.rb +580 -0
  144. data/spec/Features/feature_math_spec.rb +97 -0
  145. data/spec/Features/feature_order_spec.rb +146 -0
  146. data/spec/Features/feature_ref_store_spec.rb +209 -0
  147. data/spec/Features/feature_serialization_spec.rb +125 -0
  148. data/spec/Features/feature_stat_spec.rb +397 -0
  149. data/spec/Features/feature_virtual_spec.rb +48 -0
  150. data/spec/Features/method_eq_spec.rb +81 -0
  151. data/spec/Features/method_is_nan_spec.rb +12 -0
  152. data/spec/Features/method_map_spec.rb +54 -0
  153. data/spec/Features/method_max_with.rb +20 -0
  154. data/spec/Features/method_min_with.rb +19 -0
  155. data/spec/Features/method_ne_spec.rb +18 -0
  156. data/spec/Features/method_project_spec.rb +188 -0
  157. data/spec/Features/method_ref_spec.rb +27 -0
  158. data/spec/Features/method_round_spec.rb +11 -0
  159. data/spec/Features/method_s_linspace_spec.rb +48 -0
  160. data/spec/Features/method_s_span_spec.rb +14 -0
  161. data/spec/Features/method_seq_spec.rb +47 -0
  162. data/spec/Features/method_sort_with.rb +43 -0
  163. data/spec/Features/method_sorted_with.rb +29 -0
  164. data/spec/Features/method_span_spec.rb +42 -0
  165. data/spec/Features/method_wrap_readonly_spec.rb +43 -0
  166. data/{test → spec/UnitTest}/test_CAVirtual.rb +0 -0
  167. data/spec/spec_all.rb +0 -1
  168. data/utils/convert_test.rb +73 -0
  169. data/utils/{extract_rdoc.rb → extract_yard.rb} +7 -12
  170. data/{devel → utils}/guess_shape.rb +0 -0
  171. data/utils/{diff_method.rb → monkey_patch_methods.rb} +17 -7
  172. metadata +173 -316
  173. data/COPYING +0 -56
  174. data/GPL +0 -340
  175. data/Gemfile +0 -8
  176. data/Gemfile.lock +0 -33
  177. data/LEGAL +0 -50
  178. data/Makefile +0 -451
  179. data/TODO +0 -5
  180. data/carray_cast_func.c +0 -8670
  181. data/carray_config.h +0 -26
  182. data/carray_math.c +0 -24805
  183. data/carray_random.c +0 -531
  184. data/carray_stat_proc.c +0 -12170
  185. data/ext/calculus/carray_calculus.c +0 -931
  186. data/ext/calculus/carray_interp.c +0 -358
  187. data/ext/calculus/extconf.rb +0 -12
  188. data/ext/calculus/lib/autoload/autoload_math_calculus.rb +0 -2
  189. data/ext/calculus/lib/math/calculus.rb +0 -119
  190. data/ext/calculus/lib/math/interp/adapter_interp1d.rb +0 -31
  191. data/ext/fortio/extconf.rb +0 -3
  192. data/ext/fortio/lib/carray/autoload/autoload_fortran_format.rb +0 -5
  193. data/ext/fortio/lib/carray/io/fortran_format.rb +0 -43
  194. data/ext/fortio/lib/fortio.rb +0 -3
  195. data/ext/fortio/lib/fortio/fortran_format.rb +0 -605
  196. data/ext/fortio/lib/fortio/fortran_format.tab.rb +0 -536
  197. data/ext/fortio/lib/fortio/fortran_format.y +0 -215
  198. data/ext/fortio/lib/fortio/fortran_namelist.rb +0 -151
  199. data/ext/fortio/lib/fortio/fortran_namelist.tab.rb +0 -470
  200. data/ext/fortio/lib/fortio/fortran_namelist.y +0 -213
  201. data/ext/fortio/lib/fortio/fortran_sequential.rb +0 -345
  202. data/ext/fortio/ruby_fortio.c +0 -182
  203. data/ext/fortio/test/test_H.rb +0 -5
  204. data/ext/fortio/test/test_T.rb +0 -7
  205. data/ext/fortio/test/test_fortran_format.rb +0 -86
  206. data/ext/fortio/test/test_namelist.rb +0 -25
  207. data/ext/fortio/test/test_namelist_write.rb +0 -10
  208. data/ext/fortio/test/test_sequential.rb +0 -13
  209. data/ext/fortio/test/test_sequential2.rb +0 -13
  210. data/ext/fortio/work/test.rb +0 -10
  211. data/ext/fortio/work/test_e.rb +0 -19
  212. data/ext/fortio/work/test_ep.rb +0 -10
  213. data/ext/fortio/work/test_parse.rb +0 -12
  214. data/ext/imagemap/carray_imagemap.c +0 -495
  215. data/ext/imagemap/doc/call_graph.dot +0 -28
  216. data/ext/imagemap/draw.c +0 -567
  217. data/ext/imagemap/extconf.rb +0 -13
  218. data/ext/imagemap/lib/autoload/autoload_graphics_imagemap.rb +0 -1
  219. data/ext/imagemap/lib/graphics/imagemap.rb +0 -273
  220. data/ext/imagemap/lib/image_map.rb +0 -4
  221. data/ext/imagemap/test/swath_index.rb +0 -83
  222. data/ext/imagemap/test/swath_warp.rb +0 -99
  223. data/ext/imagemap/test/test.rb +0 -23
  224. data/ext/imagemap/test/test_image.rb +0 -42
  225. data/ext/imagemap/test/test_line.rb +0 -14
  226. data/ext/imagemap/test/test_rotate.rb +0 -17
  227. data/ext/imagemap/test/test_triangle.rb +0 -20
  228. data/ext/imagemap/test/test_warp.rb +0 -26
  229. data/ext/mathfunc/extconf.rb +0 -18
  230. data/ext/mathfunc/lib/autoload/autoload_math_mathfunc.rb +0 -1
  231. data/ext/mathfunc/lib/math/mathfunc.rb +0 -15
  232. data/ext/mathfunc/test/test_hypot.rb +0 -5
  233. data/ext/mathfunc/test/test_j0.rb +0 -22
  234. data/ext/mathfunc/test/test_jn.rb +0 -8
  235. data/ext/mathfunc/test/test_sph.rb +0 -9
  236. data/ext/narray/README +0 -22
  237. data/ext/narray/ca_wrap_narray.c +0 -500
  238. data/ext/narray/carray_narray.c +0 -21
  239. data/ext/narray/extconf.rb +0 -57
  240. data/ext/narray/lib/autoload/autoload_math_narray.rb +0 -1
  241. data/ext/narray/lib/autoload/autoload_math_narray_miss.rb +0 -11
  242. data/ext/narray/lib/math/narray.rb +0 -17
  243. data/ext/narray/lib/math/narray_miss.rb +0 -45
  244. data/lib/carray/autoload/autoload_graphics_gnuplot.rb +0 -2
  245. data/lib/carray/autoload/autoload_io_csv.rb +0 -14
  246. data/lib/carray/autoload/autoload_io_pg.rb +0 -6
  247. data/lib/carray/autoload/autoload_io_sqlite3.rb +0 -12
  248. data/lib/carray/autoload/autoload_io_table.rb +0 -1
  249. data/lib/carray/autoload/autoload_math_interp.rb +0 -4
  250. data/lib/carray/base/basic.rb +0 -1090
  251. data/lib/carray/base/obsolete.rb +0 -131
  252. data/lib/carray/graphics/gnuplot.rb +0 -2131
  253. data/lib/carray/graphics/zimg.rb +0 -296
  254. data/lib/carray/io/csv.rb +0 -572
  255. data/lib/carray/io/pg.rb +0 -101
  256. data/lib/carray/io/sqlite3.rb +0 -215
  257. data/lib/carray/math/interp.rb +0 -57
  258. data/lib/carray/math/interp/adapter_gsl_spline.rb +0 -47
  259. data/mkmf.log +0 -375
  260. data/mt19937ar.c +0 -182
  261. data/mt19937ar.h +0 -86
  262. data/rdoc_ext.rb +0 -1115
  263. data/rdoc_main.rb +0 -27
  264. data/rdoc_math.rb +0 -5
  265. data/rdoc_stat.rb +0 -31
  266. data/spec/CABlockIterator/CABlockIterator_spec.rb +0 -113
  267. data/spec/CArray/bug/store_spec.rb +0 -27
  268. data/spec/CArray/index/repeat_spec.rb +0 -10
  269. data/spec/CArray/method/eq_spec.rb +0 -80
  270. data/spec/CArray/method/is_nan_spec.rb +0 -12
  271. data/spec/CArray/method/ne_spec.rb +0 -18
  272. data/spec/CArray/method/round_spec.rb +0 -11
  273. data/spec/CArray/object/_attribute_spec.rb +0 -32
  274. data/spec/CArray/object/s_new_spec.rb +0 -31
  275. data/spec/CArray/serialize/Serialization_spec.rb +0 -89
  276. data/test/test_130.rb +0 -23
  277. data/test/test_ALL.rb +0 -51
  278. data/test/test_CABitfield.rb +0 -59
  279. data/test/test_CABlock.rb +0 -208
  280. data/test/test_CAField.rb +0 -40
  281. data/test/test_CAGrid.rb +0 -76
  282. data/test/test_CAMmap.rb +0 -11
  283. data/test/test_CARefer.rb +0 -94
  284. data/test/test_CARepeat.rb +0 -66
  285. data/test/test_CASelect.rb +0 -23
  286. data/test/test_CAShift.rb +0 -17
  287. data/test/test_CAWindow.rb +0 -55
  288. data/test/test_CAWrap.rb +0 -9
  289. data/test/test_CComplex.rb +0 -83
  290. data/test/test_CScalar.rb +0 -91
  291. data/test/test_attribute.rb +0 -281
  292. data/test/test_block_iterator.rb +0 -17
  293. data/test/test_boolean.rb +0 -99
  294. data/test/test_cast.rb +0 -33
  295. data/test/test_class.rb +0 -85
  296. data/test/test_complex.rb +0 -43
  297. data/test/test_convert.rb +0 -79
  298. data/test/test_copy.rb +0 -141
  299. data/test/test_creation.rb +0 -85
  300. data/test/test_element.rb +0 -146
  301. data/test/test_extream.rb +0 -55
  302. data/test/test_generate.rb +0 -75
  303. data/test/test_index.rb +0 -71
  304. data/test/test_mask.rb +0 -578
  305. data/test/test_math.rb +0 -98
  306. data/test/test_narray.rb +0 -64
  307. data/test/test_order.rb +0 -147
  308. data/test/test_random.rb +0 -15
  309. data/test/test_ref_store.rb +0 -211
  310. data/test/test_stat.rb +0 -414
  311. data/test/test_struct.rb +0 -72
  312. data/test/test_virtual.rb +0 -49
  313. data/utils/create_rdoc.sh +0 -9
  314. data/utils/make_tgz.sh +0 -3
  315. data/version.h +0 -18
@@ -3,10 +3,8 @@
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  ca_obj_bitarray.c
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  This file is part of Ruby/CArray extension library.
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- You can redistribute it and/or modify it under the terms of
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- the Ruby Licence.
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- Copyright (C) 2005 Hiroki Motoyoshi
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+ Copyright (C) 2005-2020 Hiroki Motoyoshi
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  ---------------------------------------------------------------------------- */
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@@ -15,7 +13,7 @@
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  typedef struct {
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  int16_t obj_type;
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  int8_t data_type;
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- int8_t rank;
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+ int8_t ndim;
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  int32_t flags;
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  ca_size_t bytes;
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  ca_size_t elements;
@@ -34,7 +32,7 @@ static int8_t CA_OBJ_BITARRAY;
34
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35
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  static VALUE rb_cCABitarray;
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- /* rdoc:
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+ /* yard:
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  class CABitArray < CAVirtual # :nodoc:
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  end
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  */
@@ -55,7 +53,7 @@ static uint8_t bits[8] = {
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  int
56
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  ca_bitarray_setup (CABitarray *ca, CArray *parent)
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  {
58
- int8_t rank;
56
+ int8_t ndim;
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  ca_size_t bitlen, elements;
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  /* check arguments */
@@ -64,19 +62,19 @@ ca_bitarray_setup (CABitarray *ca, CArray *parent)
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  rb_raise(rb_eCADataTypeError, "invalid data_type for bitarray");
65
63
  }
66
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67
- rank = parent->rank + 1;
65
+ ndim = parent->ndim + 1;
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66
  bitlen = 8 * parent->bytes;
69
67
  elements = bitlen * parent->elements;
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  ca->obj_type = CA_OBJ_BITARRAY;
72
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  ca->data_type = CA_BOOLEAN;
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  ca->flags = 0;
74
- ca->rank = rank;
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+ ca->ndim = ndim;
75
73
  ca->bytes = 1;
76
74
  ca->elements = elements;
77
75
  ca->ptr = NULL;
78
76
  ca->mask = NULL;
79
- ca->dim = ALLOC_N(ca_size_t, rank);
77
+ ca->dim = ALLOC_N(ca_size_t, ndim);
80
78
 
81
79
  ca->parent = parent;
82
80
  ca->attach = 0;
@@ -85,8 +83,8 @@ ca_bitarray_setup (CABitarray *ca, CArray *parent)
85
83
  ca->bytelen = parent->bytes;
86
84
  ca->bitlen = bitlen;
87
85
 
88
- memcpy(ca->dim, parent->dim, (rank-1) * sizeof(ca_size_t));
89
- ca->dim[rank-1] = bitlen;
86
+ memcpy(ca->dim, parent->dim, (ndim-1) * sizeof(ca_size_t));
87
+ ca->dim[ndim-1] = bitlen;
90
88
 
91
89
  if ( ca_has_mask(parent) ) {
92
90
  ca_create_mask(ca);
@@ -158,7 +156,7 @@ ca_bitarray_func_fetch_index (void *ap, ca_size_t *idx, void *ptr)
158
156
  {
159
157
  CABitarray *ca = (CABitarray *) ap;
160
158
  ca_size_t bytes = ca->parent->bytes;
161
- ca_size_t offset = idx[ca->rank-1];
159
+ ca_size_t offset = idx[ca->ndim-1];
162
160
  ca_size_t major, minor;
163
161
 
164
162
  if ( ca_endian == CA_BIG_ENDIAN &&
@@ -190,7 +188,7 @@ ca_bitarray_func_store_index (void *ap, ca_size_t *idx, void *ptr)
190
188
  {
191
189
  CABitarray *ca = (CABitarray *) ap;
192
190
  uint8_t test = *(uint8_t *) ptr;
193
- ca_size_t offset = idx[ca->rank-1];
191
+ ca_size_t offset = idx[ca->ndim-1];
194
192
  ca_size_t bytes = ca->parent->bytes;
195
193
  ca_size_t major, minor;
196
194
 
@@ -310,16 +308,16 @@ ca_bitarray_func_create_mask (void *ap)
310
308
  ca_size_t count[CA_RANK_MAX];
311
309
  int8_t i;
312
310
 
313
- for (i=0; i<ca->rank-1; i++) {
311
+ for (i=0; i<ca->ndim-1; i++) {
314
312
  count[i] = 0;
315
313
  }
316
- count[ca->rank-1] = ca->bitlen;
314
+ count[ca->ndim-1] = ca->bitlen;
317
315
 
318
316
  ca_update_mask(ca->parent);
319
317
  if ( ! ca->parent->mask ) {
320
318
  ca_create_mask(ca->parent);
321
319
  }
322
- ca->mask = (CArray *) ca_repeat_new(ca->parent->mask, ca->rank, count);
320
+ ca->mask = (CArray *) ca_repeat_new(ca->parent->mask, ca->ndim, count);
323
321
 
324
322
  ca_unset_flag(ca->mask, CA_FLAG_READ_ONLY);
325
323
  }
@@ -464,12 +462,9 @@ rb_ca_bitarray_new (VALUE cary)
464
462
  return obj;
465
463
  }
466
464
 
467
- /* rdoc:
468
- class CArray
469
- def bits
470
- end
471
- alias bitarray bits
472
- end
465
+ /* @overload bitarray
466
+
467
+ [TBD]
473
468
  */
474
469
 
475
470
  VALUE
@@ -513,8 +508,8 @@ Init_ca_obj_bitarray ()
513
508
  CA_OBJ_BITARRAY = ca_install_obj_type(rb_cCABitarray, ca_bitarray_func);
514
509
  rb_define_const(rb_cObject, "CA_OBJ_BITARRAY", INT2NUM(CA_OBJ_BITARRAY));
515
510
 
516
- rb_define_method(rb_cCArray, "bits", rb_ca_bitarray, 0);
517
511
  rb_define_method(rb_cCArray, "bitarray", rb_ca_bitarray, 0);
512
+ rb_define_alias(rb_cCArray, "bits", "bitarray");
518
513
 
519
514
  rb_define_alloc_func(rb_cCABitarray, rb_ca_bitarray_s_allocate);
520
515
  rb_define_method(rb_cCABitarray, "initialize_copy",
@@ -3,10 +3,8 @@
3
3
  ca_obj_bitfield.c
4
4
 
5
5
  This file is part of Ruby/CArray extension library.
6
- You can redistribute it and/or modify it under the terms of
7
- the Ruby Licence.
8
6
 
9
- Copyright (C) 2005 Hiroki Motoyoshi
7
+ Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
 
11
9
  ---------------------------------------------------------------------------- */
12
10
 
@@ -15,7 +13,7 @@
15
13
  typedef struct {
16
14
  int16_t obj_type;
17
15
  int8_t data_type;
18
- int8_t rank;
16
+ int8_t ndim;
19
17
  int32_t flags;
20
18
  ca_size_t bytes;
21
19
  ca_size_t elements;
@@ -35,7 +33,7 @@ static int8_t CA_OBJ_BITFIELD;
35
33
 
36
34
  static VALUE rb_cCABitfield;
37
35
 
38
- /* rdoc:
36
+ /* yard:
39
37
  class CABitField < CAVirtual # :nodoc:
40
38
  end
41
39
  */
@@ -211,7 +209,7 @@ int
211
209
  ca_bitfield_setup (CABitfield *ca, CArray *parent,
212
210
  ca_size_t offset, ca_size_t bitlen)
213
211
  {
214
- int8_t rank;
212
+ int8_t ndim;
215
213
  int8_t data_type;
216
214
  ca_size_t bytes = 0, elements;
217
215
  ca_size_t bitsize;
@@ -228,7 +226,7 @@ ca_bitfield_setup (CABitfield *ca, CArray *parent,
228
226
  }
229
227
  */
230
228
 
231
- rank = parent->rank;
229
+ ndim = parent->ndim;
232
230
  bitsize = parent->bytes * 8;
233
231
  elements = parent->elements;
234
232
 
@@ -293,12 +291,12 @@ ca_bitfield_setup (CABitfield *ca, CArray *parent,
293
291
  ca->obj_type = CA_OBJ_BITFIELD;
294
292
  ca->data_type = data_type;
295
293
  ca->flags = 0;
296
- ca->rank = rank;
294
+ ca->ndim = ndim;
297
295
  ca->bytes = bytes;
298
296
  ca->elements = elements;
299
297
  ca->ptr = NULL;
300
298
  ca->mask = NULL;
301
- ca->dim = ALLOC_N(ca_size_t, rank);
299
+ ca->dim = ALLOC_N(ca_size_t, ndim);
302
300
 
303
301
  ca->parent = parent;
304
302
  ca->attach = 0;
@@ -308,7 +306,7 @@ ca_bitfield_setup (CABitfield *ca, CArray *parent,
308
306
  ca->bit_offset = bit_offset;
309
307
  ca->bit_mask = bit_mask;
310
308
 
311
- memcpy(ca->dim, parent->dim, rank * sizeof(ca_size_t));
309
+ memcpy(ca->dim, parent->dim, ndim * sizeof(ca_size_t));
312
310
 
313
311
  if ( ca_has_mask(parent) ) {
314
312
  ca_create_mask(ca);
@@ -484,7 +482,7 @@ ca_bitfield_func_create_mask (void *ap)
484
482
  }
485
483
 
486
484
  ca->mask = (CArray *) ca_refer_new(ca->parent->mask,
487
- CA_BOOLEAN, ca->rank, ca->dim, 0, 0);
485
+ CA_BOOLEAN, ca->ndim, ca->dim, 0, 0);
488
486
  }
489
487
 
490
488
  ca_operation_function_t ca_bitfield_func = {
@@ -559,11 +557,9 @@ rb_ca_bitfield_new (VALUE cary, ca_size_t offset, ca_size_t bitlen)
559
557
  return obj;
560
558
  }
561
559
 
562
- /* rdoc:
563
- class CArray
564
- def bitfield (range, type)
565
- end
566
- end
560
+ /* @overload bitfield (range, type)
561
+
562
+ [TBD]
567
563
  */
568
564
 
569
565
  VALUE
@@ -3,10 +3,8 @@
3
3
  ca_obj_block.c
4
4
 
5
5
  This file is part of Ruby/CArray extension library.
6
- You can redistribute it and/or modify it under the terms of
7
- the Ruby Licence.
8
6
 
9
- Copyright (C) 2005 Hiroki Motoyoshi
7
+ Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
 
11
9
  ---------------------------------------------------------------------------- */
12
10
 
@@ -14,13 +12,8 @@
14
12
 
15
13
  VALUE rb_cCABlock;
16
14
 
17
- /* rdoc:
18
- class CABlock < CAVirtual # :nodoc:
19
- end
20
- */
21
-
22
15
  static int
23
- ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
16
+ ca_block_setup (CABlock *ca, CArray *parent, int8_t ndim, ca_size_t *dim,
24
17
  ca_size_t *start, ca_size_t *step, ca_size_t *count, ca_size_t offset)
25
18
  {
26
19
  int8_t data_type;
@@ -33,7 +26,7 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
33
26
  bytes = parent->bytes;
34
27
 
35
28
  elements = 1;
36
- for (i=0; i<rank; i++) {
29
+ for (i=0; i<ndim; i++) {
37
30
  if ( count[i] < 0 ) {
38
31
  rb_raise(rb_eIndexError,
39
32
  "invalid size for %i-th dimension (negative)", i);
@@ -41,8 +34,8 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
41
34
  elements *= count[i];
42
35
  }
43
36
 
44
- maxdim_index = rank-1;
45
- for (i=rank-2; i>=0; i--) {
37
+ maxdim_index = ndim-1;
38
+ for (i=ndim-2; i>=0; i--) {
46
39
  if ( count[i] > count[maxdim_index] ) {
47
40
  maxdim_index = i;
48
41
  }
@@ -50,7 +43,7 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
50
43
 
51
44
  maxdim_step = 1;
52
45
  maxdim_step0 = step[maxdim_index];
53
- for (i=maxdim_index+1; i<rank; i++) {
46
+ for (i=maxdim_index+1; i<ndim; i++) {
54
47
  maxdim_step *= count[i];
55
48
  maxdim_step0 *= dim[i];
56
49
  }
@@ -58,7 +51,7 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
58
51
  ca->obj_type = CA_OBJ_BLOCK;
59
52
  ca->data_type = data_type;
60
53
  ca->flags = 0;
61
- ca->rank = rank;
54
+ ca->ndim = ndim;
62
55
  ca->bytes = bytes;
63
56
  ca->elements = elements;
64
57
  ca->ptr = NULL;
@@ -67,10 +60,10 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
67
60
  ca->attach = 0;
68
61
  ca->nosync = 0;
69
62
  ca->offset = offset;
70
- ca->start = ALLOC_N(ca_size_t, rank);
71
- ca->step = ALLOC_N(ca_size_t, rank);
72
- ca->count = ALLOC_N(ca_size_t, rank);
73
- ca->size0 = ALLOC_N(ca_size_t, rank);
63
+ ca->start = ALLOC_N(ca_size_t, ndim);
64
+ ca->step = ALLOC_N(ca_size_t, ndim);
65
+ ca->count = ALLOC_N(ca_size_t, ndim);
66
+ ca->size0 = ALLOC_N(ca_size_t, ndim);
74
67
 
75
68
  ca->maxdim_index = maxdim_index;
76
69
  ca->maxdim_step = maxdim_step;
@@ -80,10 +73,10 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
80
73
 
81
74
  ca->dim = ca->count; /* ca->dim should not be free */
82
75
 
83
- memcpy(ca->start, start, rank * sizeof(ca_size_t));
84
- memcpy(ca->step, step, rank * sizeof(ca_size_t));
85
- memcpy(ca->count, count, rank * sizeof(ca_size_t));
86
- memcpy(ca->size0, dim, rank * sizeof(ca_size_t));
76
+ memcpy(ca->start, start, ndim * sizeof(ca_size_t));
77
+ memcpy(ca->step, step, ndim * sizeof(ca_size_t));
78
+ memcpy(ca->count, count, ndim * sizeof(ca_size_t));
79
+ memcpy(ca->size0, dim, ndim * sizeof(ca_size_t));
87
80
 
88
81
  if ( ca_has_mask(parent) ) {
89
82
  ca_create_mask(ca);
@@ -93,11 +86,11 @@ ca_block_setup (CABlock *ca, CArray *parent, int8_t rank, ca_size_t *dim,
93
86
  }
94
87
 
95
88
  CABlock *
96
- ca_block_new (CArray *parent, int8_t rank, ca_size_t *dim,
89
+ ca_block_new (CArray *parent, int8_t ndim, ca_size_t *dim,
97
90
  ca_size_t *start, ca_size_t *step, ca_size_t *count, ca_size_t offset)
98
91
  {
99
92
  CABlock *ca = ALLOC(CABlock);
100
- ca_block_setup(ca, parent, rank, dim, start, step, count, offset);
93
+ ca_block_setup(ca, parent, ndim, dim, start, step, count, offset);
101
94
  return ca;
102
95
  }
103
96
 
@@ -126,7 +119,7 @@ ca_block_func_clone (void *ap)
126
119
  {
127
120
  CABlock *ca = (CABlock *) ap;
128
121
  return ca_block_new(ca->parent,
129
- ca->rank, ca->size0,
122
+ ca->ndim, ca->size0,
130
123
  ca->start, ca->step, ca->count, ca->offset);
131
124
  }
132
125
 
@@ -162,7 +155,7 @@ ca_block_func_ptr_at_index (void *ap, ca_size_t *idx)
162
155
  int8_t i;
163
156
  ca_size_t n;
164
157
  n = start[0] + idx[0]*step[0];
165
- for (i=1; i<ca->rank; i++) {
158
+ for (i=1; i<ca->ndim; i++) {
166
159
  n *= size0[i];
167
160
  n += start[i] + idx[i]*step[i];
168
161
  }
@@ -186,7 +179,7 @@ ca_block_func_fetch_index (void *ap, ca_size_t *idx, void *ptr)
186
179
  int8_t i;
187
180
  ca_size_t n;
188
181
  n = start[0] + idx[0]*step[0];
189
- for (i=1; i<ca->rank; i++) {
182
+ for (i=1; i<ca->ndim; i++) {
190
183
  n *= size0[i];
191
184
  n += start[i] + idx[i]*step[i];
192
185
  }
@@ -204,7 +197,7 @@ ca_block_func_store_index (void *ap, ca_size_t *idx, void *ptr)
204
197
  int8_t i;
205
198
  ca_size_t n;
206
199
  n = start[0] + idx[0]*step[0];
207
- for (i=1; i<ca->rank; i++) {
200
+ for (i=1; i<ca->ndim; i++) {
208
201
  n *= size0[i];
209
202
  n += start[i] + idx[i]*step[i];
210
203
  }
@@ -292,7 +285,7 @@ ca_block_func_create_mask (void *ap)
292
285
  ca_create_mask(ca->parent);
293
286
  ca->mask =
294
287
  (CArray *) ca_block_new(ca->parent->mask,
295
- ca->rank, ca->size0,
288
+ ca->ndim, ca->size0,
296
289
  ca->start, ca->step, ca->count, ca->offset);
297
290
  }
298
291
 
@@ -320,7 +313,7 @@ ca_operation_function_t ca_block_func = {
320
313
  /* ------------------------------------------------------------------- */
321
314
 
322
315
  VALUE
323
- rb_ca_block_new (VALUE cary, int8_t rank, ca_size_t *dim,
316
+ rb_ca_block_new (VALUE cary, int8_t ndim, ca_size_t *dim,
324
317
  ca_size_t *start, ca_size_t *step, ca_size_t *count, ca_size_t offset)
325
318
  {
326
319
  volatile VALUE obj;
@@ -330,7 +323,7 @@ rb_ca_block_new (VALUE cary, int8_t rank, ca_size_t *dim,
330
323
  rb_check_carray_object(cary);
331
324
  Data_Get_Struct(cary, CArray, parent);
332
325
 
333
- ca = ca_block_new(parent, rank, dim, start, step, count, offset);
326
+ ca = ca_block_new(parent, ndim, dim, start, step, count, offset);
334
327
  obj = ca_wrap_struct(ca);
335
328
  rb_ca_set_parent(obj, cary);
336
329
  rb_ca_data_type_inherit(obj, cary);
@@ -351,7 +344,7 @@ ca_block_attach_loop2 (CABlock *ca, int8_t level, ca_size_t saddr, ca_size_t sad
351
344
  ca_size_t count = ca->count[level];
352
345
  ca_size_t addr, addr0, i;
353
346
 
354
- if ( level == ca->rank - 1 ) {
347
+ if ( level == ca->ndim - 1 ) {
355
348
  if ( ca->parent->ptr ) {
356
349
  addr = saddr * ca->dim[level];
357
350
  addr0 = saddr0 * ca->size0[level] + ca->start[level];
@@ -386,7 +379,7 @@ ca_block_attach_loop (CABlock *ca, ca_size_t level, ca_size_t saddr, ca_size_t s
386
379
  ca_size_t count = ca->count[level];
387
380
  ca_size_t addr, addr0, i;
388
381
 
389
- if ( level == ca->rank - 1 ) {
382
+ if ( level == ca->ndim - 1 ) {
390
383
  if ( level == ca->maxdim_index ) {
391
384
  addr = saddr * ca->dim[level];
392
385
  addr0 = saddr0 * ca->size0[level] + ca->start[level];
@@ -431,7 +424,7 @@ static void
431
424
  ca_block_attach (CABlock *ca)
432
425
  {
433
426
  ca_size_t addr = 0, addr0 = 0;
434
- if ( ca->rank <= 2 ) {
427
+ if ( ca->ndim <= 2 ) {
435
428
  ca_block_attach_loop2(ca, 0, addr, addr0);
436
429
  }
437
430
  else {
@@ -445,7 +438,7 @@ ca_block_sync_loop2 (CABlock *ca, int8_t level, ca_size_t saddr, ca_size_t saddr
445
438
  ca_size_t count = ca->count[level];
446
439
  ca_size_t addr, addr0, i;
447
440
 
448
- if ( level == ca->rank - 1 ) {
441
+ if ( level == ca->ndim - 1 ) {
449
442
  if ( ca->parent->ptr ) {
450
443
  addr = saddr * ca->dim[level];
451
444
  addr0 = saddr0 * ca->size0[level] + ca->start[level];
@@ -479,7 +472,7 @@ ca_block_sync_loop (CABlock *ca, int8_t level, ca_size_t saddr, ca_size_t saddr0
479
472
  ca_size_t count = ca->count[level];
480
473
  ca_size_t addr, addr0, i;
481
474
 
482
- if ( level == ca->rank - 1 ) {
475
+ if ( level == ca->ndim - 1 ) {
483
476
  if ( level == ca->maxdim_index ) {
484
477
  addr = saddr * ca->dim[level];
485
478
  addr0 = saddr0 * ca->size0[level] + ca->start[level];
@@ -520,7 +513,7 @@ static void
520
513
  ca_block_sync (CABlock *cb)
521
514
  {
522
515
  ca_size_t addr = 0, addr0 = 0;
523
- if ( cb->rank <= 2 ) {
516
+ if ( cb->ndim <= 2 ) {
524
517
  ca_block_sync_loop2(cb, 0, addr, addr0);
525
518
  }
526
519
  else {
@@ -533,7 +526,7 @@ ca_block_fill_loop2 (CABlock *ca, int8_t level, ca_size_t saddr, char *val)
533
526
  {
534
527
  ca_size_t count = ca->count[level];
535
528
  ca_size_t addr, i;
536
- if ( level == ca->rank - 1 ) {
529
+ if ( level == ca->ndim - 1 ) {
537
530
  addr = saddr * ca->dim[level];
538
531
  mfill_step(ca_ptr_at_addr(ca, addr),
539
532
  ca->bytes, count, ca->step[level], val);
@@ -551,7 +544,7 @@ ca_block_fill_loop (CABlock *ca, int8_t level, ca_size_t saddr, char *val)
551
544
  {
552
545
  ca_size_t count = ca->count[level];
553
546
  ca_size_t addr, i;
554
- if ( level == ca->rank - 1 ) {
547
+ if ( level == ca->ndim - 1 ) {
555
548
  if ( level == ca->maxdim_index ) {
556
549
  addr = saddr * ca->dim[level];
557
550
  mfill_step(ca_ptr_at_addr(ca, addr),
@@ -586,7 +579,7 @@ static void
586
579
  ca_block_fill (CABlock *ca, char *val)
587
580
  {
588
581
  ca_size_t addr = 0;
589
- if ( ca->rank <= 2 ) {
582
+ if ( ca->ndim <= 2 ) {
590
583
  ca_block_fill_loop2(ca, 0, addr, val);
591
584
  }
592
585
  else {
@@ -707,12 +700,12 @@ rb_cb_initialize_copy (VALUE self, VALUE other)
707
700
  Data_Get_Struct(self, CABlock, ca);
708
701
  Data_Get_Struct(other, CABlock, cs);
709
702
 
710
- for (i=0; i<cs->rank; i++) {
703
+ for (i=0; i<cs->ndim; i++) {
711
704
  shrink[i] = 0;
712
705
  }
713
706
 
714
707
  ca_block_setup(ca, cs->parent,
715
- cs->rank, cs->size0, cs->start, cs->step, cs->count, cs->offset);
708
+ cs->ndim, cs->size0, cs->start, cs->step, cs->count, cs->offset);
716
709
 
717
710
  /* CHECK ME : other.parent instead of other ? */
718
711
  rb_ca_set_parent(self, rb_ca_parent(other));
@@ -728,14 +721,14 @@ rb_cb_initialize_copy (VALUE self, VALUE other)
728
721
  CABlock *cb; \
729
722
  int8_t i; \
730
723
  Data_Get_Struct(self, CABlock, cb); \
731
- ary = rb_ary_new2(cb->rank); \
732
- for (i=0; i<cb->rank; i++) { \
724
+ ary = rb_ary_new2(cb->ndim); \
725
+ for (i=0; i<cb->ndim; i++) { \
733
726
  rb_ary_store(ary, i, LONG2NUM(cb->name[i])); \
734
727
  } \
735
728
  return ary; \
736
729
  }
737
730
 
738
- /* rdoc:
731
+ /* @overload size0:
739
732
  class CABlock
740
733
  def size0
741
734
  end
@@ -763,7 +756,7 @@ rb_cb_offset (VALUE self)
763
756
  return SIZE2NUM(cb->offset);
764
757
  }
765
758
 
766
- /* rdoc:
759
+ /* yard:
767
760
  class CABlock
768
761
  def idx2addr0 (idx)
769
762
  end
@@ -780,13 +773,13 @@ rb_cb_idx2addr0 (int argc, VALUE *argv, VALUE self)
780
773
 
781
774
  Data_Get_Struct(self, CABlock, cb);
782
775
 
783
- if ( argc != cb->rank ) {
776
+ if ( argc != cb->ndim ) {
784
777
  rb_raise(rb_eArgError,
785
- "invalid # of arguments (should be <%i>)", cb->rank);
778
+ "invalid # of arguments (should be <%i>)", cb->ndim);
786
779
  }
787
780
 
788
781
  addr = 0;
789
- for (i=0; i<cb->rank; i++) {
782
+ for (i=0; i<cb->ndim; i++) {
790
783
  idxi = NUM2SIZE(argv[i]);
791
784
  CA_CHECK_INDEX(idxi, cb->dim[i]);
792
785
  addr = cb->size0[i] * addr + cb->start[i] + idxi * cb->step[i];
@@ -795,7 +788,7 @@ rb_cb_idx2addr0 (int argc, VALUE *argv, VALUE self)
795
788
  return SIZE2NUM(addr + cb->offset);
796
789
  }
797
790
 
798
- /* rdoc:
791
+ /* yard:
799
792
  class CABlock
800
793
  def addr2addr0 (addr)
801
794
  end
@@ -815,7 +808,7 @@ rb_cb_addr2addr0 (VALUE self, VALUE raddr)
815
808
  ca_addr2index((CArray*)cb, addr, idx);
816
809
 
817
810
  addr = 0;
818
- for (i=0; i<cb->rank; i++) {
811
+ for (i=0; i<cb->ndim; i++) {
819
812
  addr *= cb->size0[i];
820
813
  addr += cb->start[i] + idx[i] * cb->step[i];
821
814
  }
@@ -824,7 +817,7 @@ rb_cb_addr2addr0 (VALUE self, VALUE raddr)
824
817
  }
825
818
 
826
819
 
827
- /* rdoc:
820
+ /* yard:
828
821
  class CABlock
829
822
  def move (*index)
830
823
  end
@@ -840,13 +833,13 @@ rb_cb_move (int argc, VALUE *argv, VALUE self)
840
833
 
841
834
  Data_Get_Struct(self, CABlock, cb);
842
835
 
843
- if ( argc != cb->rank ) {
836
+ if ( argc != cb->ndim ) {
844
837
  rb_raise(rb_eArgError, "invalid # of arguments");
845
838
  }
846
839
 
847
840
  ca_update_mask(cb);
848
841
 
849
- for (i=0; i<cb->rank; i++) {
842
+ for (i=0; i<cb->ndim; i++) {
850
843
  start = NUM2SIZE(argv[i]);
851
844
  if ( start < 0 ) {
852
845
  start += cb->size0[i];