bolognese 0.9.56 → 0.9.58
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- checksums.yaml +4 -4
- data/.travis.yml +1 -1
- data/Gemfile.lock +6 -4
- data/README.md +7 -0
- data/bolognese.gemspec +1 -0
- data/lib/bolognese.rb +1 -0
- data/lib/bolognese/metadata.rb +12 -4
- data/lib/bolognese/readers/bibtex_reader.rb +4 -1
- data/lib/bolognese/readers/crossref_reader.rb +60 -34
- data/lib/bolognese/readers/datacite_reader.rb +4 -11
- data/lib/bolognese/readers/ris_reader.rb +2 -1
- data/lib/bolognese/utils.rb +111 -51
- data/lib/bolognese/version.rb +1 -1
- data/lib/bolognese/writers/bibtex_writer.rb +1 -1
- data/lib/bolognese/writers/citeproc_writer.rb +1 -1
- data/lib/bolognese/writers/crosscite_writer.rb +2 -1
- data/lib/bolognese/writers/jats_writer.rb +94 -0
- data/lib/bolognese/writers/ris_writer.rb +2 -1
- data/lib/bolognese/writers/schema_org_writer.rb +2 -1
- data/resources/kernel-4/include/datacite-dateType-v4.1.xsd +1 -1
- data/resources/kernel-4/include/datacite-relationType-v4.1.xsd +1 -1
- data/resources/kernel-4/include/datacite-resourceType-v4.1.xsd +1 -1
- data/resources/kernel-4/metadata.xsd +1 -1
- data/spec/author_utils_spec.rb +1 -1
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/crossref/default.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/crossref/to_bibtex.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/crossref/to_crossref.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/crossref/to_datacite.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/crossref/to_schema_org.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/default.yml +27 -13
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_bibtex.yml +25 -13
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_citation.yml +17 -17
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_crossref.yml +27 -13
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_datacite.yml +26 -12
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/crossref/to_schema_org.yml +27 -13
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/default.yml +15 -52
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_bibtex.yml +16 -51
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_citation.yml +20 -51
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite.yml +16 -49
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_datacite_json.yml +15 -50
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/datacite/to_schema_org.yml +16 -51
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/default.yml +15 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_bibtex.yml +15 -15
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_datacite.yml +14 -14
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_from_id/schema_org/to_schema_org.yml +16 -16
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/author.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/no_author.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/single_author.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/authors_as_string/with_organization.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_doi.yml +26 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_datacite_metadata/change_title.yml +23 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/validates_against_schema.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/change_metadata_as_datacite_xml/with_data_citation.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/not_a_doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/sandbox_url.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_from_url/url.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/crossref.yml +35 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/datacite.yml +36 -30
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/medra.yml +35 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_a_valid_prefix.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_registration_agency/not_found.yml +27 -27
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/doi_with_protocol.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/dx_doi_org_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/force_test_resolver.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/https_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/test_resolver.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_resolver/test_resolver_http.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/doi_with_protocol.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/dx_doi_org_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/force_test_resolver.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/https_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/test_resolver.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/doi_search/test_resolver_http.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref.yml +39 -86
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/crossref_doi_not_url.yml +36 -89
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite.yml +40 -85
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/datacite_doi_http.yml +36 -89
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/github.yml +19 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/orcid.yml +21 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/schema_org.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_by_ID/unknown_DOI_registration_agency.yml +31 -82
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/bibtex.yml +20 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/citeproc.yml +21 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/codemeta.yml +23 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crosscite.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/crossref.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/datacite_json.yml +21 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/ris.yml +24 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_file/schema_org.yml +23 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_from_format_from_string/crosscite.yml +20 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/from_schema_org/with_id.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/maremma.yml +10 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/no_codemeta_json.yml +8 -8
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_codemeta_metadata/not_found_error.yml +8 -8
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_ORCID_ID.yml +34 -30
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_SICI_DOI.yml +33 -29
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/DOI_with_data_citation.yml +35 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter.yml +150 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset.yml +34 -30
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/date_in_future.yml +33 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/journal_article.yml +33 -31
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/not_found_error.yml +26 -26
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/posted_content.yml +34 -30
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_raw/journal_article.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/BlogPosting.yml +23 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/BlogPosting_in_test_system.yml +22 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_in_test_system.yml +24 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/DOI_not_found.yml +24 -29
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Dataset.yml +24 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Funding.yml +22 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Funding_schema_version_4.yml +20 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_only_full_name.yml +23 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_with_scheme.yml +26 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/author_with_wrong_orcid_scheme.yml +24 -66
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/date.yml +24 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/empty_subject.yml +24 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/funding_schema_version_3.yml +24 -66
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/is_identical_to.yml +24 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/keywords_with_attributes.yml +28 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/leading_and_trailing_whitespace.yml +26 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_author_names_in_one_creatorName.yml +23 -64
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/multiple_licenses.yml +25 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/date.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/year-month.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_from_date_parts/year.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/date.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/year-month.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_date_parts/year.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_name_identifiers/has_ORCID.yml +11 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_name_identifiers/has_jacow_org_scheme.yml +13 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_name_identifiers/has_multiple_name_identifier.yml +14 -80
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_name_identifiers/has_no_ORCID.yml +13 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_familyName.yml +11 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_multiple_names_in_display-order.yml +7 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_name_in_Thai.yml +12 -80
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_name_in_display-order.yml +12 -78
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_name_in_display-order_with_ORCID.yml +13 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/has_name_in_sort-order.yml +12 -80
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/hyper-authorship.yml +9 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/is_organization.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/multiple_author_names_in_one_field.yml +9 -79
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/multiple_name_identifier.yml +13 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/name_with_affiliation.yml +14 -45
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_one_author/name_with_role.yml +14 -45
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_schema_org_metadata/BlogPosting.yml +19 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_schema_org_metadata/BlogPosting_with_new_DOI.yml +20 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_schema_org_metadata/not_found_error.yml +2 -2
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/handle_input/DOI_RA_not_Crossref_or_DataCite.yml +17 -23
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/handle_input/unknown_DOI_prefix.yml +8 -22
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_alternate_identifiers/insert.yml +6 -41
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_contributors/none.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_creators/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_dates/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_descriptions/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_identifier/doi.yml +6 -41
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_person/creator_only_name.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_publication_year/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_publisher/insert.yml +6 -41
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_related_identifiers/insert.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_related_identifiers/related_identifier.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_resource_type/insert.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_rights_list/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_subjects/insert.yml +5 -42
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_titles/insert.yml +6 -41
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/insert_version/insert.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_comma.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_family_name.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_id.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_known_given_name.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_no_info.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/is_personal_name_/has_type_organization.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/jsonlint/missing_comma.yml +19 -62
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/jsonlint/nil.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/jsonlint/overlapping_keys.yml +20 -65
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/jsonlint/valid.yml +22 -63
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/SICI_doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_force_datacite_sandbox.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_from_datacite_sandbox.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_from_url_without_doi_proxy.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_prefix_too_long.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_prefix_with_string.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/doi_with_protocol.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/dx_doi_org_url.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/https_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/not_valid_doi_prefix.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_doi/url_with_one_slash.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/doi_as_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/ftp.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/invalid_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/sandbox_via_options.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/sandbox_via_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/string.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/url.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_id/url_with_utf-8.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_ids/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_ids/url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_url/uri.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/normalize_url/with_trailing_slash.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/array.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/array_of_strings.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/first.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/hash.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/nil.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/parse_attributes/string.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/sanitize/should_only_keep_specific_tags.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/sanitize/should_remove_a_tags.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/to_schema_org/with_id.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_https.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_id.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_with_spaces.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_wrong_id.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_www.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_https.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_trailing_slash.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid_scheme/validate_orcid_scheme_www.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi_as_url.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/doi_with_protocol.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_prefix/only_prefix.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/DOI.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/ISSN.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/URL.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/string.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/BlogPosting.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/Dataset.yml +5 -42
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/from_schema_org.yml +20 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/maremma.yml +11 -11
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/text.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/with_data_citation.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_bibtex/with_pages.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Dataset.yml +8 -43
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Journal_article.yml +10 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citation/Journal_article_vancouver_style.yml +12 -12
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/BlogPosting.yml +4 -39
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/BlogPosting_schema_org.yml +19 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/Dataset.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/container_title.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/journal_article.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/maremma.yml +10 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/multiple_abstracts.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/software.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_citeproc/with_pages.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_codemeta/SoftwareSourceCode_DataCite.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/datacite_database_attributes.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/maremma.yml +8 -8
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/with_ORCID_ID.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/with_data_citation.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crosscite/with_data_citation_schema_org.yml +19 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crossref/from_DataCite.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_crossref/journal_article.yml +9 -3
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_json/maremma.yml +9 -9
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_json/with_ORCID_ID.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_json/with_data_citation.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_json/with_data_citation_schema_org.yml +19 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/Dataset_in_schema_4_0.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/Text_pass-thru.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/maremma.yml +9 -9
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_ORCID_ID.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_data_citation.yml +19 -7
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_data_citation_schema_org.yml +20 -20
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_datacite_xml/with_editor.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/Dataset_in_schema_4_0.yml +38 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/Text_pass-thru.yml +40 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/book_chapter.yml +60 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/maremma.yml +73 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_ORCID_ID.yml +79 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_data_citation.yml +79 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_data_citation_schema_org.yml +121 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_jats_xml/with_editor.yml +79 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/BlogPosting.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/BlogPosting_schema_org.yml +19 -19
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/Dataset.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/alternate_name.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/journal_article.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/maremma.yml +10 -10
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_ris/with_pages.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Funding.yml +5 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Funding_OpenAIRE.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_IsSupplementTo.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/Schema_org_JSON_isReferencedBy.yml +7 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/journal_article.yml +18 -6
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_schema_org/maremma_schema_org_JSON.yml +11 -11
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting.yml +101 -80
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting_Citeproc_JSON.yml +94 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/BlogPosting_DataCite_JSON.yml +94 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/Crossref_DOI.yml +94 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/DataONE.yml +94 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/write_metadata_as_turtle/Dataset.yml +99 -80
- data/spec/readers/crossref_reader_spec.rb +32 -20
- data/spec/readers/datacite_reader_spec.rb +0 -4
- data/spec/writers/bibtex_writer_spec.rb +1 -1
- data/spec/writers/citation_writer_spec.rb +1 -1
- data/spec/writers/crosscite_writer_spec.rb +4 -4
- data/spec/writers/datacite_json_writer_spec.rb +3 -3
- data/spec/writers/datacite_writer_spec.rb +4 -4
- data/spec/writers/jats_writer_spec.rb +173 -0
- data/spec/writers/ris_writer_spec.rb +19 -21
- data/spec/writers/schema_org_writer_spec.rb +2 -6
- metadata +27 -12
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/datacite/default.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/datacite/to_bibtex.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/datacite/to_datacite.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/datacite/to_datacite_invalid.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/convert_file/datacite/to_schema_org.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/BlogPosting_from_string.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Schema_4_1_from_string.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/Schema_4_1_from_string_with_doi_in_options.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_metadata/missing_creator.yml +0 -38
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_datacite_raw/BlogPosting.yml +0 -38
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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Date:
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-
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X-Rate-Limit-Interval:
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Connection:
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body:
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http_version:
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recorded_at:
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recorded_at: Mon, 23 Oct 2017 18:10:13 GMT
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recorded_with: VCR 3.0.3
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Crossref-Deployment-Name:
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-
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Content-Language:
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Date:
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-
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28
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+
X-Cache:
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X-Cache-Lookup:
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Connection:
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string: !binary |-
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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Date:
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-
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X-Rate-Limit-Interval:
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Connection:
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body:
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http_version:
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recorded_at: Mon, 23 Oct 2017 18:10:05 GMT
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recorded_with: VCR 3.0.3
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Crossref-Deployment-Name:
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-
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Content-Language:
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Date:
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-
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28
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+
X-Cache:
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X-Cache-Lookup:
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Connection:
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string: !binary |-
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http_version:
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recorded_at: Mon, 23 Oct 2017 18:10:01 GMT
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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@@ -63,17 +69,23 @@ http_interactions:
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- http-kit
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X-Cache-Lookup:
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- MISS from IMP-cache:3128
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- 1.0 IMP-cache (squid/3.1.20)
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Connection:
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body:
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encoding: UTF-8
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string: '{"status":"ok","message-type":"prefix","message-version":"1.0.0","message":{"member":"http:\/\/id.crossref.org\/member\/246","name":"Cold
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http_version:
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recorded_at:
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recorded_at: Mon, 23 Oct 2017 18:10:03 GMT
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recorded_with: VCR 3.0.3
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-
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|
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string: !binary |-
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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X-Rate-Limit-Interval:
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body:
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http_version:
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recorded_at: Mon, 23 Oct 2017 18:10:10 GMT
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recorded_with: VCR 3.0.3
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Crossref-Deployment-Name:
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-
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Date:
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-
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28
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X-Cache:
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X-Cache-Lookup:
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string: !binary |-
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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Date:
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-
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X-Rate-Limit-Interval:
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Connection:
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body:
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http_version:
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recorded_at: Mon, 23 Oct 2017 18:09:42 GMT
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recorded_with: VCR 3.0.3
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Crossref-Deployment-Name:
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-
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- text/xml;charset=UTF-8
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Content-Language:
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Date:
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-
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28
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+
X-Cache:
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X-Cache-Lookup:
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Connection:
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string: !binary |-
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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Date:
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-
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- '50'
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X-Rate-Limit-Interval:
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- 1.0 IMP-cache (squid/3.1.20)
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Connection:
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body:
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encoding: UTF-8
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http_version:
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recorded_at:
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recorded_at: Mon, 23 Oct 2017 18:09:37 GMT
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recorded_with: VCR 3.0.3
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Server:
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Crossref-Deployment-Name:
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-
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Content-Type:
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- text/xml;charset=UTF-8
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Content-Language:
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27
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Date:
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-
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28
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+
X-Cache:
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- MISS from IMP-cache
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X-Cache-Lookup:
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Via:
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Connection:
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string: !binary |-
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http_version:
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method: get
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uri: http://api.crossref.org/prefixes/10.1101
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- http-kit
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Date:
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-
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X-Rate-Limit-Interval:
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Connection:
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body:
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http_version:
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recorded_at:
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recorded_at: Mon, 23 Oct 2017 18:09:16 GMT
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recorded_with: VCR 3.0.3
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Crossref-Deployment-Name:
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-
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Content-Type:
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Content-Language:
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27
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Date:
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-
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28
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+
X-Cache:
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- MISS from IMP-cache
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X-Cache-Lookup:
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Connection:
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string: !binary |-
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|
35
41
|
http_version:
|
36
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-
recorded_at:
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42
|
+
recorded_at: Mon, 23 Oct 2017 18:09:01 GMT
|
37
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|
- request:
|
38
44
|
method: get
|
39
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|
uri: http://api.crossref.org/prefixes/10.1101
|
@@ -63,17 +69,23 @@ http_interactions:
|
|
63
69
|
Server:
|
64
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|
- http-kit
|
65
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|
Date:
|
66
|
-
-
|
72
|
+
- Mon, 23 Oct 2017 18:09:03 GMT
|
67
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|
X-Rate-Limit-Limit:
|
68
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|
- '50'
|
69
75
|
X-Rate-Limit-Interval:
|
70
76
|
- 1s
|
77
|
+
X-Cache:
|
78
|
+
- MISS from IMP-cache
|
79
|
+
X-Cache-Lookup:
|
80
|
+
- MISS from IMP-cache:3128
|
81
|
+
Via:
|
82
|
+
- 1.0 IMP-cache (squid/3.1.20)
|
71
83
|
Connection:
|
72
|
-
-
|
84
|
+
- keep-alive
|
73
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|
body:
|
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|
encoding: UTF-8
|
75
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|
string: '{"status":"ok","message-type":"prefix","message-version":"1.0.0","message":{"member":"http:\/\/id.crossref.org\/member\/246","name":"Cold
|
76
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|
Spring Harbor Laboratory","prefix":"http:\/\/id.crossref.org\/prefix\/10.1101"}}'
|
77
89
|
http_version:
|
78
|
-
recorded_at:
|
90
|
+
recorded_at: Mon, 23 Oct 2017 18:09:03 GMT
|
79
91
|
recorded_with: VCR 3.0.3
|