bolognese 0.2.2 → 2.7.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +5 -5
- data/.github/workflows/build.yml +9 -0
- data/.github/workflows/changelog.yml +36 -0
- data/.github/workflows/ci.yml +22 -0
- data/.github/workflows/pull-request.yml +9 -0
- data/.github/workflows/release.yml +32 -0
- data/.gitignore +4 -0
- data/.rubocop.yml +658 -0
- data/CHANGELOG.md +1864 -0
- data/CITATION +17 -0
- data/Gemfile +1 -1
- data/Gemfile.lock +251 -99
- data/README.md +1026 -2
- data/Rakefile +1 -0
- data/bin/bolognese +5 -1
- data/bolognese.gemspec +33 -21
- data/lib/bolognese/array.rb +13 -0
- data/lib/bolognese/author_utils.rb +115 -39
- data/lib/bolognese/citeproc_extensions.rb +48 -0
- data/lib/bolognese/cli.rb +28 -15
- data/lib/bolognese/datacite_utils.rb +418 -0
- data/lib/bolognese/doi_utils.rb +45 -23
- data/lib/bolognese/metadata.rb +250 -18
- data/lib/bolognese/metadata_utils.rb +228 -0
- data/lib/bolognese/pubmed.rb +2 -0
- data/lib/bolognese/readers/bibtex_reader.rb +100 -0
- data/lib/bolognese/readers/citeproc_reader.rb +125 -0
- data/lib/bolognese/readers/codemeta_reader.rb +108 -0
- data/lib/bolognese/readers/crosscite_reader.rb +17 -0
- data/lib/bolognese/readers/crossref_reader.rb +413 -0
- data/lib/bolognese/readers/datacite_json_reader.rb +17 -0
- data/lib/bolognese/readers/datacite_reader.rb +338 -0
- data/lib/bolognese/readers/npm_reader.rb +115 -0
- data/lib/bolognese/readers/ris_reader.rb +114 -0
- data/lib/bolognese/readers/schema_org_reader.rb +264 -0
- data/lib/bolognese/string.rb +3 -1
- data/lib/bolognese/utils.rb +1403 -12
- data/lib/bolognese/version.rb +1 -1
- data/lib/bolognese/whitelist_scrubber.rb +47 -0
- data/lib/bolognese/writers/bibtex_writer.rb +32 -0
- data/lib/bolognese/writers/citation_writer.rb +14 -0
- data/lib/bolognese/writers/citeproc_writer.rb +11 -0
- data/lib/bolognese/writers/codemeta_writer.rb +29 -0
- data/lib/bolognese/writers/crosscite_writer.rb +11 -0
- data/lib/bolognese/writers/crossref_writer.rb +11 -0
- data/lib/bolognese/writers/csv_writer.rb +24 -0
- data/lib/bolognese/writers/datacite_json_writer.rb +13 -0
- data/lib/bolognese/writers/datacite_writer.rb +12 -0
- data/lib/bolognese/writers/jats_writer.rb +138 -0
- data/lib/bolognese/writers/rdf_xml_writer.rb +11 -0
- data/lib/bolognese/writers/ris_writer.rb +29 -0
- data/lib/bolognese/writers/schema_org_writer.rb +55 -0
- data/lib/bolognese/writers/turtle_writer.rb +11 -0
- data/lib/bolognese.rb +19 -4
- data/package.json +12 -0
- data/resources/2008/09/xsd.xsl +997 -0
- data/resources/datacite-contributorType-v4.xsd +35 -0
- data/resources/datacite-dateType-v4.xsd +25 -0
- data/resources/datacite-descriptionType-v4.xsd +19 -0
- data/resources/datacite-funderIdentifierType-v4.xsd +15 -0
- data/resources/datacite-nameType-v4.xsd +10 -0
- data/resources/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/datacite-relationType-v4.xsd +49 -0
- data/resources/datacite-resourceType-v4.xsd +28 -0
- data/resources/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-2.1/include/datacite-contributorType-v1.1.xsd +22 -0
- data/resources/kernel-2.1/include/datacite-contributorType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-dateType-v1.1.xsd +31 -0
- data/resources/kernel-2.1/include/datacite-dateType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-descriptionType-v1.1.xsd +14 -0
- data/resources/kernel-2.1/include/datacite-descriptionType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-relatedIdentifierType-v1.1.xsd +24 -0
- data/resources/kernel-2.1/include/datacite-relatedIdentifierType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-relationType-v1.1.xsd +29 -0
- data/resources/kernel-2.1/include/datacite-relationType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-resourceType-v1.1.xsd +22 -0
- data/resources/kernel-2.1/include/datacite-resourceType-v2.xsd +3 -0
- data/resources/kernel-2.1/include/datacite-titleType-v1.1.xsd +11 -0
- data/resources/kernel-2.1/include/datacite-titleType-v2.xsd +3 -0
- data/resources/kernel-2.1/metadata.xsd +315 -0
- data/resources/kernel-2.2/include/datacite-contributorType-v2.xsd +29 -0
- data/resources/kernel-2.2/include/datacite-dateType-v2.xsd +21 -0
- data/resources/kernel-2.2/include/datacite-descriptionType-v2.xsd +15 -0
- data/resources/kernel-2.2/include/datacite-relatedIdentifierType-v2.xsd +25 -0
- data/resources/kernel-2.2/include/datacite-relationType-v2.xsd +29 -0
- data/resources/kernel-2.2/include/datacite-resourceType-v2.xsd +23 -0
- data/resources/kernel-2.2/include/datacite-titleType-v2.xsd +10 -0
- data/resources/kernel-2.2/metadata.xsd +316 -0
- data/resources/kernel-3/include/datacite-contributorType-v3.1.xsd +35 -0
- data/resources/kernel-3/include/datacite-dateType-v3.xsd +21 -0
- data/resources/kernel-3/include/datacite-descriptionType-v3.xsd +17 -0
- data/resources/kernel-3/include/datacite-relatedIdentifierType-v3.1.xsd +30 -0
- data/resources/kernel-3/include/datacite-relationType-v3.1.xsd +38 -0
- data/resources/kernel-3/include/datacite-resourceType-v3.xsd +26 -0
- data/resources/kernel-3/include/datacite-titleType-v3.xsd +12 -0
- data/resources/kernel-3/include/xml.xsd +286 -0
- data/resources/kernel-3/metadata.xsd +380 -0
- data/resources/kernel-3.0/include/datacite-contributorType-v3.xsd +33 -0
- data/resources/kernel-3.0/include/datacite-dateType-v3.xsd +21 -0
- data/resources/kernel-3.0/include/datacite-descriptionType-v3.xsd +17 -0
- data/resources/kernel-3.0/include/datacite-relatedIdentifierType-v3.xsd +27 -0
- data/resources/kernel-3.0/include/datacite-relationType-v3.xsd +33 -0
- data/resources/kernel-3.0/include/datacite-resourceType-v3.xsd +26 -0
- data/resources/kernel-3.0/include/datacite-titleType-v3.xsd +12 -0
- data/resources/kernel-3.0/include/xml.xsd +286 -0
- data/resources/kernel-3.0/metadata.xsd +377 -0
- data/resources/kernel-3.1/include/datacite-contributorType-v3.1.xsd +35 -0
- data/resources/kernel-3.1/include/datacite-dateType-v3.xsd +21 -0
- data/resources/kernel-3.1/include/datacite-descriptionType-v3.xsd +17 -0
- data/resources/kernel-3.1/include/datacite-relatedIdentifierType-v3.1.xsd +30 -0
- data/resources/kernel-3.1/include/datacite-relationType-v3.1.xsd +38 -0
- data/resources/kernel-3.1/include/datacite-resourceType-v3.xsd +26 -0
- data/resources/kernel-3.1/include/datacite-titleType-v3.xsd +12 -0
- data/resources/kernel-3.1/include/xml.xsd +286 -0
- data/resources/kernel-3.1/metadata.xsd +380 -0
- data/resources/kernel-4/include/datacite-contributorType-v4.xsd +37 -0
- data/resources/kernel-4/include/datacite-dateType-v4.xsd +27 -0
- data/resources/kernel-4/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4/include/datacite-relatedIdentifierType-v4.xsd +39 -0
- data/resources/kernel-4/include/datacite-relationType-v4.xsd +59 -0
- data/resources/kernel-4/include/datacite-resourceType-v4.xsd +52 -0
- data/resources/kernel-4/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4/include/xml.xsd +286 -0
- data/resources/kernel-4/metadata.xsd +715 -0
- data/resources/kernel-4.0/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.0/include/datacite-dateType-v4.xsd +21 -0
- data/resources/kernel-4.0/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.0/include/datacite-funderIdentifierType-v4.xsd +15 -0
- data/resources/kernel-4.0/include/datacite-relatedIdentifierType-v4.xsd +32 -0
- data/resources/kernel-4.0/include/datacite-relationType-v4.xsd +39 -0
- data/resources/kernel-4.0/include/datacite-resourceType-v4.xsd +26 -0
- data/resources/kernel-4.0/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.0/include/xml.xsd +286 -0
- data/resources/kernel-4.0/metadata.xsd +470 -0
- data/resources/kernel-4.1/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.1/include/datacite-dateType-v4.1.xsd +23 -0
- data/resources/kernel-4.1/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.1/include/datacite-funderIdentifierType-v4.xsd +15 -0
- data/resources/kernel-4.1/include/datacite-nameType-v4.1.xsd +10 -0
- data/resources/kernel-4.1/include/datacite-relatedIdentifierType-v4.xsd +32 -0
- data/resources/kernel-4.1/include/datacite-relationType-v4.1.xsd +46 -0
- data/resources/kernel-4.1/include/datacite-resourceType-v4.1.xsd +28 -0
- data/resources/kernel-4.1/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.1/include/xml.xsd +286 -0
- data/resources/kernel-4.1/metadata.xsd +483 -0
- data/resources/kernel-4.2/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.2/include/datacite-dateType-v4.xsd +25 -0
- data/resources/kernel-4.2/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.2/include/datacite-funderIdentifierType-v4.xsd +15 -0
- data/resources/kernel-4.2/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.2/include/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/kernel-4.2/include/datacite-relationType-v4.xsd +49 -0
- data/resources/kernel-4.2/include/datacite-resourceType-v4.xsd +28 -0
- data/resources/kernel-4.2/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.2/include/xml.xsd +286 -0
- data/resources/kernel-4.2/metadata.xsd +479 -0
- data/resources/kernel-4.3/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.3/include/datacite-dateType-v4.xsd +25 -0
- data/resources/kernel-4.3/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.3/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4.3/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.3/include/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/kernel-4.3/include/datacite-relationType-v4.xsd +49 -0
- data/resources/kernel-4.3/include/datacite-resourceType-v4.xsd +28 -0
- data/resources/kernel-4.3/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.3/include/xml.xsd +286 -0
- data/resources/kernel-4.3/metadata.xsd +515 -0
- data/resources/kernel-4.4/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.4/include/datacite-dateType-v4.xsd +25 -0
- data/resources/kernel-4.4/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.4/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4.4/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.4/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4.4/include/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/kernel-4.4/include/datacite-relationType-v4.xsd +51 -0
- data/resources/kernel-4.4/include/datacite-resourceType-v4.xsd +43 -0
- data/resources/kernel-4.4/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.4/include/xml.xsd +286 -0
- data/resources/kernel-4.4/metadata.xsd +707 -0
- data/resources/kernel-4.5/include/datacite-contributorType-v4.xsd +35 -0
- data/resources/kernel-4.5/include/datacite-dateType-v4.xsd +25 -0
- data/resources/kernel-4.5/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.5/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4.5/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.5/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4.5/include/datacite-relatedIdentifierType-v4.xsd +34 -0
- data/resources/kernel-4.5/include/datacite-relationType-v4.xsd +53 -0
- data/resources/kernel-4.5/include/datacite-resourceType-v4.xsd +45 -0
- data/resources/kernel-4.5/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.5/include/xml.xsd +286 -0
- data/resources/kernel-4.5/metadata.xsd +711 -0
- data/resources/kernel-4.6/include/datacite-contributorType-v4.xsd +37 -0
- data/resources/kernel-4.6/include/datacite-dateType-v4.xsd +27 -0
- data/resources/kernel-4.6/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.6/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4.6/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.6/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4.6/include/datacite-relatedIdentifierType-v4.xsd +37 -0
- data/resources/kernel-4.6/include/datacite-relationType-v4.xsd +57 -0
- data/resources/kernel-4.6/include/datacite-resourceType-v4.xsd +49 -0
- data/resources/kernel-4.6/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.6/include/xml.xsd +286 -0
- data/resources/kernel-4.6/metadata.xsd +712 -0
- data/resources/kernel-4.7/include/datacite-contributorType-v4.xsd +37 -0
- data/resources/kernel-4.7/include/datacite-dateType-v4.xsd +27 -0
- data/resources/kernel-4.7/include/datacite-descriptionType-v4.xsd +19 -0
- data/resources/kernel-4.7/include/datacite-funderIdentifierType-v4.xsd +16 -0
- data/resources/kernel-4.7/include/datacite-nameType-v4.xsd +10 -0
- data/resources/kernel-4.7/include/datacite-numberType-v4.xsd +12 -0
- data/resources/kernel-4.7/include/datacite-relatedIdentifierType-v4.xsd +39 -0
- data/resources/kernel-4.7/include/datacite-relationType-v4.xsd +59 -0
- data/resources/kernel-4.7/include/datacite-resourceType-v4.xsd +52 -0
- data/resources/kernel-4.7/include/datacite-titleType-v4.xsd +14 -0
- data/resources/kernel-4.7/include/xml.xsd +286 -0
- data/resources/kernel-4.7/metadata.xsd +715 -0
- data/resources/oecd/dfg-mappings.json +1866 -0
- data/resources/oecd/for-mappings.json +1101 -0
- data/resources/oecd/fos-mappings.json +198 -0
- data/resources/schema_org/jsonldcontext.json +7477 -0
- data/resources/spdx/licenses.json +5297 -0
- data/resources/xml.xsd +286 -0
- metadata +478 -150
- data/.travis.yml +0 -23
- data/lib/bolognese/crossref.rb +0 -202
- data/lib/bolognese/datacite.rb +0 -157
- data/lib/bolognese/date_utils.rb +0 -48
- data/lib/bolognese/github.rb +0 -106
- data/lib/bolognese/orcid.rb +0 -24
- data/lib/bolognese/pid_utils.rb +0 -23
- data/spec/cli_spec.rb +0 -37
- data/spec/crossref_spec.rb +0 -113
- data/spec/datacite_spec.rb +0 -49
- data/spec/doi_spec.rb +0 -89
- data/spec/fixtures/crossref.xml +0 -742
- data/spec/fixtures/datacite.xml +0 -40
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/read/crossref/as_crossref.yml +0 -760
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/read/crossref/as_schema_org.yml +0 -1476
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/read/datacite/as_datacite.yml +0 -214
- data/spec/fixtures/vcr_cassettes/Bolognese_CLI/read/datacite/as_schema_org.yml +0 -384
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/doi_registration_agency/crossref.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/doi_registration_agency/datacite.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/doi_registration_agency/medra.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/doi_registration_agency/not_found.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/DOI_test.yml +0 -843
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/DOI_with_SICI_DOI.yml +0 -277
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/DOI_with_data_citation.yml +0 -15755
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/date_in_future.yml +0 -2691
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/journal_article.yml +0 -1857
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/not_found_error.yml +0 -93
- data/spec/fixtures/vcr_cassettes/Bolognese_Crossref/get_metadata/posted_content.yml +0 -5715
- data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata/BlogPosting.yml +0 -307
- data/spec/fixtures/vcr_cassettes/Bolognese_Datacite/get_metadata/Dataset.yml +0 -343
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_PID_provider/crossref.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_PID_provider/crossref_doi_not_url.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_PID_provider/datacite.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_PID_provider/datacite_doi_http.yml +0 -44
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/find_PID_provider/orcid.yml +0 -44
- data/spec/metadata_spec.rb +0 -35
- data/spec/orcid_spec.rb +0 -23
- data/spec/spec_helper.rb +0 -88
- /data/{LICENSE → LICENSE.md} +0 -0
data/spec/fixtures/datacite.xml
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<resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4/metadata.xsd">
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<identifier identifierType="DOI">10.5438/4K3M-NYVG</identifier>
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<creatorName>Fenner, Martin</creatorName>
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<title>Eating your own Dog Food</title>
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<publisher>DataCite</publisher>
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<publicationYear>2016</publicationYear>
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<resourceType resourceTypeGeneral="Text">BlogPosting</resourceType>
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<alternateIdentifier alternateIdentifierType="Local accession number">MS-49-3632-5083</alternateIdentifier>
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<subject>doi</subject>
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<dates>
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<date dateType="Created">2016-12-20</date>
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<date dateType="Issued">2016-12-20</date>
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<date dateType="Updated">2016-12-20</date>
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<relatedIdentifier relatedIdentifierType="DOI" relationType="References">10.5438/0012</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="DOI" relationType="References">10.5438/55E5-T5C0</relatedIdentifier>
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34
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<relatedIdentifier relatedIdentifierType="DOI" relationType="IsPartOf">10.5438/0000-00SS</relatedIdentifier>
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35
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</relatedIdentifiers>
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36
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<version>1.0</version>
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37
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<descriptions>
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38
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<description descriptionType="Abstract">Eating your own dog food is a slang term to describe that an organization should itself use the products and services it provides. For DataCite this means that we should use DOIs with appropriate metadata and strategies for long-term preservation for...</description>
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39
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</descriptions>
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40
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</resource>
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