bio-ucsc-api 0.0.4 → 0.0.5

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  1. data/README.rdoc +23 -12
  2. data/VERSION +1 -1
  3. data/bio-ucsc-api.gemspec +6743 -20
  4. data/lib/bio-ucsc-api.rb +9 -0
  5. data/lib/bio-ucsc.rb +1 -1
  6. data/lib/bio-ucsc/hg18.rb +3855 -15
  7. data/lib/bio-ucsc/hg18/acembly.rb +24 -0
  8. data/lib/bio-ucsc/hg18/acemblyclass.rb +24 -0
  9. data/lib/bio-ucsc/hg18/acemblypep.rb +23 -0
  10. data/lib/bio-ucsc/hg18/acescan.rb +23 -0
  11. data/lib/bio-ucsc/hg18/activerecord.rb +151 -24
  12. data/lib/bio-ucsc/hg18/affyallexonprobes.rb +24 -0
  13. data/lib/bio-ucsc/hg18/affyexontissues.rb +24 -0
  14. data/lib/bio-ucsc/hg18/affyexontissuesgs.rb +22 -0
  15. data/lib/bio-ucsc/hg18/affyexontissuesgsmedian.rb +22 -0
  16. data/lib/bio-ucsc/hg18/affyexontissuesgsmediandist.rb +22 -0
  17. data/lib/bio-ucsc/hg18/affygnf1h.rb +25 -0
  18. data/lib/bio-ucsc/hg18/affyratio.rb +28 -0
  19. data/lib/bio-ucsc/hg18/affytxnphase3fragshdf.rb +24 -0
  20. data/lib/bio-ucsc/hg18/affytxnphase3fragshelabottomstrand.rb +24 -0
  21. data/lib/bio-ucsc/hg18/affytxnphase3fragshelacyto.rb +24 -0
  22. data/lib/bio-ucsc/hg18/affytxnphase3fragshelanuclear.rb +24 -0
  23. data/lib/bio-ucsc/hg18/affytxnphase3fragshelatopstrand.rb +24 -0
  24. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2bottomstrand.rb +24 -0
  25. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2cyto.rb +24 -0
  26. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2nuclear.rb +24 -0
  27. data/lib/bio-ucsc/hg18/affytxnphase3fragshepg2topstrand.rb +24 -0
  28. data/lib/bio-ucsc/hg18/affytxnphase3fragsjurkat.rb +24 -0
  29. data/lib/bio-ucsc/hg18/affytxnphase3fragsnccit.rb +24 -0
  30. data/lib/bio-ucsc/hg18/affytxnphase3fragspc3.rb +24 -0
  31. data/lib/bio-ucsc/hg18/affytxnphase3fragssk_n_as.rb +24 -0
  32. data/lib/bio-ucsc/hg18/affytxnphase3fragsu87mg.rb +24 -0
  33. data/lib/bio-ucsc/hg18/affytxnphase3hdf.rb +25 -0
  34. data/lib/bio-ucsc/hg18/affytxnphase3helabottomstrand.rb +24 -0
  35. data/lib/bio-ucsc/hg18/affytxnphase3helacyto.rb +25 -0
  36. data/lib/bio-ucsc/hg18/affytxnphase3helanuclear.rb +25 -0
  37. data/lib/bio-ucsc/hg18/affytxnphase3helatopstrand.rb +24 -0
  38. data/lib/bio-ucsc/hg18/affytxnphase3hepg2bottomstrand.rb +24 -0
  39. data/lib/bio-ucsc/hg18/affytxnphase3hepg2cyto.rb +25 -0
  40. data/lib/bio-ucsc/hg18/affytxnphase3hepg2nuclear.rb +25 -0
  41. data/lib/bio-ucsc/hg18/affytxnphase3hepg2topstrand.rb +24 -0
  42. data/lib/bio-ucsc/hg18/affytxnphase3jurkat.rb +25 -0
  43. data/lib/bio-ucsc/hg18/affytxnphase3nccit.rb +25 -0
  44. data/lib/bio-ucsc/hg18/affytxnphase3pc3.rb +25 -0
  45. data/lib/bio-ucsc/hg18/affytxnphase3sk_n_as.rb +25 -0
  46. data/lib/bio-ucsc/hg18/affytxnphase3u87mg.rb +25 -0
  47. data/lib/bio-ucsc/hg18/affyu133.rb +25 -0
  48. data/lib/bio-ucsc/hg18/affyu133plus2.rb +25 -0
  49. data/lib/bio-ucsc/hg18/affyu95.rb +26 -0
  50. data/lib/bio-ucsc/hg18/agilentcgh105a.rb +23 -0
  51. data/lib/bio-ucsc/hg18/agilentcgh1x1m.rb +25 -0
  52. data/lib/bio-ucsc/hg18/agilentcgh244a.rb +23 -0
  53. data/lib/bio-ucsc/hg18/agilentcgh2x400k.rb +24 -0
  54. data/lib/bio-ucsc/hg18/agilentcgh44k.rb +23 -0
  55. data/lib/bio-ucsc/hg18/agilentcgh4x180k.rb +24 -0
  56. data/lib/bio-ucsc/hg18/agilentcgh8x60k.rb +24 -0
  57. data/lib/bio-ucsc/hg18/agilenthrd1x1m.rb +24 -0
  58. data/lib/bio-ucsc/hg18/all_bacends.rb +24 -0
  59. data/lib/bio-ucsc/hg18/all_est.rb +23 -0
  60. data/lib/bio-ucsc/hg18/all_fosends.rb +23 -0
  61. data/lib/bio-ucsc/hg18/all_mrna.rb +23 -0
  62. data/lib/bio-ucsc/hg18/allenbrainali.rb +26 -0
  63. data/lib/bio-ucsc/hg18/allenbrainurl.rb +27 -0
  64. data/lib/bio-ucsc/hg18/augustusabinitio.rb +24 -0
  65. data/lib/bio-ucsc/hg18/augustushints.rb +24 -0
  66. data/lib/bio-ucsc/hg18/augustusxra.rb +24 -0
  67. data/lib/bio-ucsc/hg18/bacendpairs.rb +28 -0
  68. data/lib/bio-ucsc/hg18/biocycpathway.rb +22 -0
  69. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignadipose.rb +23 -0
  70. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignadiposeallrawsignal.rb +23 -0
  71. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbrain.rb +23 -0
  72. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbrainallrawsignal.rb +23 -0
  73. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbreast.rb +23 -0
  74. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbreastallrawsignal.rb +23 -0
  75. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbt474.rb +23 -0
  76. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignbt474allrawsignal.rb +23 -0
  77. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligncolon.rb +23 -0
  78. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligncolonallrawsignal.rb +23 -0
  79. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignheart.rb +23 -0
  80. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignheartallrawsignal.rb +23 -0
  81. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignhme.rb +23 -0
  82. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignhmeallrawsignal.rb +23 -0
  83. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignliver.rb +23 -0
  84. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignliverallrawsignal.rb +23 -0
  85. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignlymphnode.rb +23 -0
  86. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignlymphnodeallrawsignal.rb +23 -0
  87. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignmb435.rb +23 -0
  88. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignmb435allrawsignal.rb +23 -0
  89. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignmcf7.rb +23 -0
  90. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignmcf7allrawsignal.rb +23 -0
  91. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignskelmuscle.rb +23 -0
  92. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignskelmuscleallrawsignal.rb +23 -0
  93. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignt47d.rb +23 -0
  94. data/lib/bio-ucsc/hg18/burgernaseqgemmapperalignt47dallrawsignal.rb +23 -0
  95. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligntestes.rb +23 -0
  96. data/lib/bio-ucsc/hg18/burgernaseqgemmapperaligntestesallrawsignal.rb +23 -0
  97. data/lib/bio-ucsc/hg18/ccdsgene.rb +23 -0
  98. data/lib/bio-ucsc/hg18/ccdsinfo.rb +23 -0
  99. data/lib/bio-ucsc/hg18/ccdskgmap.rb +23 -0
  100. data/lib/bio-ucsc/hg18/ccdsnotes.rb +22 -0
  101. data/lib/bio-ucsc/hg18/ceblasttab.rb +23 -0
  102. data/lib/bio-ucsc/hg18/cgapsage.rb +28 -0
  103. data/lib/bio-ucsc/hg18/cgapsagelib.rb +29 -0
  104. data/lib/bio-ucsc/hg18/chainanocar1.rb +47 -0
  105. data/lib/bio-ucsc/hg18/chainbostau4.rb +47 -0
  106. data/lib/bio-ucsc/hg18/chainbraflo1.rb +47 -0
  107. data/lib/bio-ucsc/hg18/chaincaljac1.rb +43 -0
  108. data/lib/bio-ucsc/hg18/chaincanfam2.rb +47 -0
  109. data/lib/bio-ucsc/hg18/chaincavpor3.rb +47 -0
  110. data/lib/bio-ucsc/hg18/chaindanrer5.rb +47 -0
  111. data/lib/bio-ucsc/hg18/chainequcab1.rb +47 -0
  112. data/lib/bio-ucsc/hg18/chainfelcat3.rb +47 -0
  113. data/lib/bio-ucsc/hg18/chainfr2.rb +47 -0
  114. data/lib/bio-ucsc/hg18/chaingalgal3.rb +47 -0
  115. data/lib/bio-ucsc/hg18/chaingasacu1.rb +47 -0
  116. data/lib/bio-ucsc/hg18/chainmm9.rb +47 -0
  117. data/lib/bio-ucsc/hg18/chainmondom4.rb +47 -0
  118. data/lib/bio-ucsc/hg18/chainornana1.rb +47 -0
  119. data/lib/bio-ucsc/hg18/chainorylat2.rb +47 -0
  120. data/lib/bio-ucsc/hg18/chainpantro2.rb +42 -0
  121. data/lib/bio-ucsc/hg18/chainpetmar1.rb +47 -0
  122. data/lib/bio-ucsc/hg18/chainponabe2.rb +42 -0
  123. data/lib/bio-ucsc/hg18/chainrhemac2.rb +47 -0
  124. data/lib/bio-ucsc/hg18/chainrn4.rb +47 -0
  125. data/lib/bio-ucsc/hg18/chainself.rb +41 -0
  126. data/lib/bio-ucsc/hg18/chainstrpur2.rb +43 -0
  127. data/lib/bio-ucsc/hg18/chaintaegut1.rb +47 -0
  128. data/lib/bio-ucsc/hg18/chaintetnig1.rb +47 -0
  129. data/lib/bio-ucsc/hg18/chainxentro2.rb +47 -0
  130. data/lib/bio-ucsc/hg18/clonepos.rb +23 -0
  131. data/lib/bio-ucsc/hg18/cnpiafrate2.rb +1 -1
  132. data/lib/bio-ucsc/hg18/cnptuzun.rb +23 -0
  133. data/lib/bio-ucsc/hg18/consindelshgmmcanfam.rb +30 -0
  134. data/lib/bio-ucsc/hg18/consindelshgmmcanfamconf.rb +29 -0
  135. data/lib/bio-ucsc/hg18/contrastgene.rb +24 -0
  136. data/lib/bio-ucsc/hg18/cpgislandext.rb +23 -0
  137. data/lib/bio-ucsc/hg18/ctgpos.rb +28 -0
  138. data/lib/bio-ucsc/hg18/cytoband.rb +26 -0
  139. data/lib/bio-ucsc/hg18/darned.rb +33 -0
  140. data/lib/bio-ucsc/hg18/delconrad2.rb +23 -0
  141. data/lib/bio-ucsc/hg18/delhinds2.rb +23 -0
  142. data/lib/bio-ucsc/hg18/delmccarroll.rb +23 -0
  143. data/lib/bio-ucsc/hg18/dmblasttab.rb +23 -0
  144. data/lib/bio-ucsc/hg18/drblasttab.rb +23 -0
  145. data/lib/bio-ucsc/hg18/ecorestetnig1.rb +24 -0
  146. data/lib/bio-ucsc/hg18/eiojcvinasneg.rb +24 -0
  147. data/lib/bio-ucsc/hg18/eiojcvinaspos.rb +24 -0
  148. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalbrg1hr00.rb +24 -0
  149. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalbrg1hr02.rb +24 -0
  150. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalbrg1hr08.rb +24 -0
  151. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalbrg1hr32.rb +24 -0
  152. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalcebpehr00.rb +24 -0
  153. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalcebpehr02.rb +24 -0
  154. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalcebpehr08.rb +24 -0
  155. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalcebpehr32.rb +24 -0
  156. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalctcfhr00.rb +24 -0
  157. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalctcfhr02.rb +24 -0
  158. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalctcfhr08.rb +24 -0
  159. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalctcfhr32.rb +24 -0
  160. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh3k27me3hr00.rb +24 -0
  161. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh3k27me3hr02.rb +24 -0
  162. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh3k27me3hr08.rb +24 -0
  163. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh3k27me3hr32.rb +24 -0
  164. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh4kac4hr00.rb +24 -0
  165. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh4kac4hr02.rb +24 -0
  166. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh4kac4hr08.rb +24 -0
  167. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalh4kac4hr32.rb +24 -0
  168. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalp300hr00.rb +24 -0
  169. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalp300hr02.rb +24 -0
  170. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalp300hr08.rb +24 -0
  171. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalp300hr32.rb +24 -0
  172. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalpu1hr00.rb +24 -0
  173. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalpu1hr02.rb +24 -0
  174. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalpu1hr08.rb +24 -0
  175. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalpu1hr32.rb +24 -0
  176. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrarahr00.rb +24 -0
  177. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrarahr02.rb +24 -0
  178. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrarahr08.rb +24 -0
  179. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrarahr32.rb +24 -0
  180. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrnaphr00.rb +24 -0
  181. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrnaphr02.rb +24 -0
  182. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrnaphr08.rb +24 -0
  183. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalrnaphr32.rb +24 -0
  184. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalsirt1hr00.rb +24 -0
  185. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalsirt1hr02.rb +24 -0
  186. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalsirt1hr08.rb +24 -0
  187. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalsirt1hr32.rb +24 -0
  188. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricth3k9k14dhr00.rb +24 -0
  189. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricth3k9k14dhr02.rb +24 -0
  190. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricth3k9k14dhr08.rb +24 -0
  191. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricth3k9k14dhr32.rb +24 -0
  192. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricthish4hr00.rb +24 -0
  193. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricthish4hr02.rb +24 -0
  194. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricthish4hr08.rb +24 -0
  195. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstricthish4hr32.rb +24 -0
  196. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictp63_actd.rb +24 -0
  197. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictp63_mactd.rb +24 -0
  198. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictpol2hr00.rb +24 -0
  199. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictpol2hr02.rb +24 -0
  200. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictpol2hr08.rb +24 -0
  201. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvalstrictpol2hr32.rb +24 -0
  202. data/lib/bio-ucsc/hg18/encodeaffychiphl60pvaltfiibhr32.rb +24 -0
  203. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricth3k9k14dhr00.rb +25 -0
  204. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricth3k9k14dhr02.rb +25 -0
  205. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricth3k9k14dhr08.rb +25 -0
  206. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricth3k9k14dhr32.rb +25 -0
  207. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricthish4hr00.rb +25 -0
  208. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricthish4hr02.rb +25 -0
  209. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricthish4hr08.rb +25 -0
  210. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstricthish4hr32.rb +25 -0
  211. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictp63_actd.rb +25 -0
  212. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictp63_mactd.rb +25 -0
  213. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictpol2hr00.rb +25 -0
  214. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictpol2hr02.rb +25 -0
  215. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictpol2hr08.rb +25 -0
  216. data/lib/bio-ucsc/hg18/encodeaffychiphl60signalstrictpol2hr32.rb +25 -0
  217. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesbrg1hr00.rb +24 -0
  218. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesbrg1hr02.rb +24 -0
  219. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesbrg1hr08.rb +24 -0
  220. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesbrg1hr32.rb +24 -0
  221. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitescebpehr00.rb +24 -0
  222. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitescebpehr02.rb +24 -0
  223. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitescebpehr08.rb +24 -0
  224. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitescebpehr32.rb +24 -0
  225. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesctcfhr00.rb +24 -0
  226. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesctcfhr02.rb +24 -0
  227. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesctcfhr08.rb +24 -0
  228. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesctcfhr32.rb +24 -0
  229. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh3k27me3hr00.rb +24 -0
  230. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh3k27me3hr02.rb +24 -0
  231. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh3k27me3hr08.rb +24 -0
  232. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh3k27me3hr32.rb +24 -0
  233. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh4kac4hr00.rb +24 -0
  234. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh4kac4hr02.rb +24 -0
  235. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh4kac4hr08.rb +24 -0
  236. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesh4kac4hr32.rb +24 -0
  237. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesp300hr00.rb +24 -0
  238. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesp300hr02.rb +24 -0
  239. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesp300hr08.rb +24 -0
  240. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesp300hr32.rb +24 -0
  241. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitespu1hr00.rb +24 -0
  242. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitespu1hr02.rb +24 -0
  243. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitespu1hr08.rb +24 -0
  244. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitespu1hr32.rb +24 -0
  245. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrarahr00.rb +24 -0
  246. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrarahr02.rb +24 -0
  247. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrarahr08.rb +24 -0
  248. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrarahr32.rb +24 -0
  249. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrnaphr00.rb +24 -0
  250. data/lib/bio-ucsc/hg18/encodeaffychiphl60sitesrnaphr02.rb +24 -0
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  1986. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549ctcfpcr1xdexa.rb +25 -0
  1987. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549ctcfpcr1xetoh02.rb +25 -0
  1988. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549grpcr1xdex500pm.rb +25 -0
  1989. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549grpcr1xdex50nm.rb +25 -0
  1990. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549grpcr1xdex5nm.rb +25 -0
  1991. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549grpcr1xetoh02.rb +25 -0
  1992. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549pol2.rb +25 -0
  1993. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549pol2pcr2xetoh02.rb +25 -0
  1994. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549usf1pcr1xdexa.rb +25 -0
  1995. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1a549usf1pcr1xetoh02.rb +25 -0
  1996. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1be2ccontrol.rb +25 -0
  1997. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1be2cnrsf.rb +25 -0
  1998. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878batf.rb +25 -0
  1999. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878bcl11a.rb +25 -0
  2000. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878bcl3pcr1xbcl3.rb +25 -0
  2001. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878controlpcr2x.rb +25 -0
  2002. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878controlv2.rb +25 -0
  2003. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878ebf.rb +25 -0
  2004. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878egr1.rb +25 -0
  2005. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878gabp.rb +25 -0
  2006. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878irf4.rb +25 -0
  2007. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878nrsf.rb +25 -0
  2008. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878oct2.rb +25 -0
  2009. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878p300.rb +25 -0
  2010. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pax5c20.rb +25 -0
  2011. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pax5n19.rb +25 -0
  2012. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pbx3.rb +25 -0
  2013. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pol2.rb +25 -0
  2014. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pol24h8pcr1x.rb +25 -0
  2015. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878pu1.rb +25 -0
  2016. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878sin3ak20.rb +25 -0
  2017. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878sp1pcr1x.rb +25 -0
  2018. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878srf.rb +25 -0
  2019. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878taf1.rb +25 -0
  2020. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878tcf12.rb +25 -0
  2021. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878usf1.rb +25 -0
  2022. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12878zbtb33.rb +25 -0
  2023. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891controlpcr1x.rb +25 -0
  2024. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891pol24h8pcr1x.rb +25 -0
  2025. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891pol2pcr1x.rb +25 -0
  2026. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891pou2f2pcr1x.rb +25 -0
  2027. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891pu1pcr1x.rb +25 -0
  2028. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12891taf1pcr1x.rb +25 -0
  2029. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12892controlpcr1x.rb +25 -0
  2030. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12892pol24h8pcr1x.rb +25 -0
  2031. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12892pol2pcr1x.rb +25 -0
  2032. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1gm12892taf1pcr1x.rb +25 -0
  2033. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1h1hesccontrolpcr1x.rb +25 -0
  2034. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1h1hescnrsfpcr1x.rb +25 -0
  2035. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1h1hescpol24h8pcr1x.rb +25 -0
  2036. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1h1hescpol2pcr1x.rb +25 -0
  2037. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1h1hesctaf1pcr1x.rb +25 -0
  2038. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1helas3control.rb +25 -0
  2039. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1helas3gabp.rb +25 -0
  2040. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1helas3pol2.rb +25 -0
  2041. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1helas3taf1pcr1xtaf1.rb +25 -0
  2042. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2bhlhe40pcr1x.rb +25 -0
  2043. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2controlpcr1x.rb +25 -0
  2044. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2fosl2pcr1x.rb +25 -0
  2045. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2gabp.rb +25 -0
  2046. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2hey1pcr1x.rb +25 -0
  2047. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2jund.rb +25 -0
  2048. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2nrsf.rb +25 -0
  2049. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2p300.rb +25 -0
  2050. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2pol2.rb +25 -0
  2051. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2rxrapcr1x.rb +25 -0
  2052. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2sin3ak20.rb +25 -0
  2053. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2srf.rb +25 -0
  2054. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2taf1.rb +25 -0
  2055. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2usf1.rb +25 -0
  2056. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1hepg2zbtb33pcr1x.rb +25 -0
  2057. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1htb11control.rb +25 -0
  2058. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1htb11nrsf.rb +25 -0
  2059. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1jurkatcontrolpcr2x.rb +25 -0
  2060. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1jurkatpol2pcr2x.rb +25 -0
  2061. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562controlpcr2x.rb +25 -0
  2062. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562controlv2.rb +25 -0
  2063. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562egr1.rb +25 -0
  2064. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562gabp.rb +25 -0
  2065. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562hey1.rb +25 -0
  2066. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562nrsf.rb +25 -0
  2067. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562pol2.rb +25 -0
  2068. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562pol24h8.rb +25 -0
  2069. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562pu1.rb +25 -0
  2070. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562sin3ak20.rb +25 -0
  2071. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562six5.rb +25 -0
  2072. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562srf.rb +25 -0
  2073. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562taf1.rb +25 -0
  2074. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1k562usf1.rb +25 -0
  2075. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1panc1control.rb +25 -0
  2076. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1panc1nrsf.rb +25 -0
  2077. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1pfsk1control.rb +25 -0
  2078. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1pfsk1foxp2.rb +25 -0
  2079. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1pfsk1nrsf.rb +25 -0
  2080. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1sknmcfoxp2.rb +25 -0
  2081. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1u87control.rb +25 -0
  2082. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep1u87nrsf.rb +25 -0
  2083. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549ctcfpcr1xdexa.rb +25 -0
  2084. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549ctcfpcr1xetoh02.rb +25 -0
  2085. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549grpcr1xdex500pm.rb +25 -0
  2086. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549grpcr1xdex50nm.rb +25 -0
  2087. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549grpcr1xdex5nm.rb +25 -0
  2088. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549grpcr1xetoh02.rb +25 -0
  2089. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549pol2.rb +25 -0
  2090. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549pol2pcr2xetoh02.rb +25 -0
  2091. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549usf1pcr1xdexa.rb +25 -0
  2092. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2a549usf1pcr1xetoh02.rb +25 -0
  2093. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2be2ccontrol.rb +25 -0
  2094. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2be2cnrsf.rb +25 -0
  2095. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878batf.rb +25 -0
  2096. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878bcl11a.rb +25 -0
  2097. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878bcl3pcr1xbcl3.rb +25 -0
  2098. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878controlpcr2x.rb +25 -0
  2099. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878controlv2.rb +25 -0
  2100. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878ebf.rb +25 -0
  2101. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878egr1.rb +25 -0
  2102. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878gabp.rb +25 -0
  2103. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878irf4.rb +25 -0
  2104. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878nrsf.rb +25 -0
  2105. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878oct2.rb +25 -0
  2106. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878p300.rb +25 -0
  2107. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pax5c20.rb +25 -0
  2108. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pax5n19.rb +25 -0
  2109. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pbx3.rb +25 -0
  2110. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pol2.rb +25 -0
  2111. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pol24h8pcr1x.rb +25 -0
  2112. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878pu1.rb +25 -0
  2113. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878sin3ak20.rb +25 -0
  2114. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878sp1pcr1x.rb +25 -0
  2115. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878srf.rb +25 -0
  2116. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878taf1.rb +25 -0
  2117. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878tcf12.rb +25 -0
  2118. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878usf1.rb +25 -0
  2119. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12878zbtb33.rb +25 -0
  2120. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12891pol24h8pcr1x.rb +25 -0
  2121. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12891pol2pcr1x.rb +25 -0
  2122. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12891pou2f2pcr1x.rb +25 -0
  2123. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12891pu1pcr1x.rb +25 -0
  2124. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12891taf1pcr1x.rb +25 -0
  2125. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12892pol24h8pcr1x.rb +25 -0
  2126. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12892pol2pcr1x.rb +25 -0
  2127. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2gm12892taf1pcr1x.rb +25 -0
  2128. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2h1hescnrsfpcr1x.rb +25 -0
  2129. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2h1hescpol24h8pcr1x.rb +25 -0
  2130. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2h1hescpol2pcr1x.rb +25 -0
  2131. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2h1hesctaf1pcr1x.rb +25 -0
  2132. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2helas3control.rb +25 -0
  2133. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2helas3gabp.rb +25 -0
  2134. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2helas3pol2.rb +25 -0
  2135. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2helas3taf1pcr1xtaf1.rb +25 -0
  2136. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2bhlhe40pcr1x.rb +25 -0
  2137. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2controlpcr1x.rb +25 -0
  2138. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2fosl2pcr1x.rb +25 -0
  2139. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2gabp.rb +25 -0
  2140. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2hey1pcr1x.rb +25 -0
  2141. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2jund.rb +25 -0
  2142. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2nrsf.rb +25 -0
  2143. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2p300.rb +25 -0
  2144. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2pol2.rb +25 -0
  2145. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2rxrapcr1x.rb +25 -0
  2146. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2sin3ak20.rb +25 -0
  2147. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2taf1.rb +25 -0
  2148. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2usf1.rb +25 -0
  2149. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2hepg2zbtb33pcr1x.rb +25 -0
  2150. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2htb11control.rb +25 -0
  2151. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2htb11nrsf.rb +25 -0
  2152. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2jurkatcontrolpcr2x.rb +25 -0
  2153. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2jurkatpol2pcr2x.rb +25 -0
  2154. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562controlpcr2x.rb +25 -0
  2155. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562controlv2.rb +25 -0
  2156. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562egr1.rb +25 -0
  2157. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562gabp.rb +25 -0
  2158. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562hey1.rb +25 -0
  2159. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562nrsf.rb +25 -0
  2160. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562pol2.rb +25 -0
  2161. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562pol24h8.rb +25 -0
  2162. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562pu1.rb +25 -0
  2163. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562sin3ak20.rb +25 -0
  2164. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562six5.rb +25 -0
  2165. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562srf.rb +25 -0
  2166. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562taf1.rb +25 -0
  2167. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2k562usf1.rb +25 -0
  2168. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2panc1control.rb +25 -0
  2169. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2panc1nrsf.rb +25 -0
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  2171. data/lib/bio-ucsc/hg18/wgencodehudsonalphachipseqrawsignalrep2pfsk1foxp2.rb +25 -0
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  3262. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhelas3brg1iggmus.rb +25 -0
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  3286. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhepg2controlforskln.rb +25 -0
  3287. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhepg2controlinsln.rb +25 -0
  3288. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhepg2erraforskln.rb +25 -0
  3289. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhepg2grp20forskln.rb +25 -0
  3290. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalhepg2hnf4aforskln.rb +25 -0
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  3321. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalk562ifna30stat2.rb +25 -0
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  3337. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalk562nelfe.rb +25 -0
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  3350. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalnt2d1suz12.rb +25 -0
  3351. data/lib/bio-ucsc/hg18/wgencodeyalechipseqsignalnt2d1yy1.rb +25 -0
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  3357. data/lib/bio-ucsc/hg18/xenorefgene.rb +27 -0
  3358. data/lib/bio-ucsc/hg18/xenorefseqali.rb +24 -0
  3359. data/lib/bio-ucsc/hg18/yalebertonetars.rb +26 -0
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  3368. data/lib/bio-ucsc/hg19/omimtoknowncanonical.rb +28 -0
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  3371. data/lib/bio-ucsc/hg19/snp131orthopt2pa2rm2.rb +31 -0
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  3375. data/lib/bio-ucsc/hg19/{wgencodeuwdnaseag09319pkrep1.rb → wgencodeuwdnasehnpcepkrep2v2.rb} +3 -3
  3376. data/lib/bio-ucsc/hg19/{wgencodeuwdnasehrepkrep2.rb → wgencodeuwdnasehrepkrep1v2.rb} +3 -3
  3377. data/lib/bio-ucsc/hg19/{wgencodeuwdnaseh7espkrep1.rb → wgencodeuwdnasehrepkrep2v2.rb} +3 -3
  3378. data/lib/bio-ucsc/hg19/{wgencodeuwdnasehrepkrep1.rb → wgencodeuwdnasehrpepkrep1v2.rb} +3 -3
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  3380. data/lib/bio-ucsc/hg19/wgencodeuwdnasehuvecpkrep1v2.rb +35 -0
  3381. data/samples/bed2refseq.rb +19 -0
  3382. data/samples/num-gene-exon.rb +33 -0
  3383. data/spec/hg18/acembly_spec.rb +16 -0
  3384. data/spec/hg18/acemblyclass_spec.rb +15 -0
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  3388. data/spec/hg18/affyexontissues_spec.rb +16 -0
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  3398. data/spec/hg18/affytxnphase3fragshelatopstrand_spec.rb +16 -0
  3399. data/spec/hg18/affytxnphase3fragshepg2bottomstrand_spec.rb +16 -0
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  3916. data/spec/hg18/encodestanfordpromotersu87_spec.rb +16 -0
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  4119. data/spec/hg18/encodeyalemasplacrnanprottarsrevmless36mer36bp_spec.rb +16 -0
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  6141. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm06990h3k27me3_spec.rb +16 -0
  6142. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm06990h3k36me3_spec.rb +16 -0
  6143. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm06990h3k4me3_spec.rb +16 -0
  6144. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12864ctcf_spec.rb +16 -0
  6145. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12865ctcf_spec.rb +16 -0
  6146. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12872ctcf_spec.rb +16 -0
  6147. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12873ctcf_spec.rb +16 -0
  6148. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12874ctcf_spec.rb +16 -0
  6149. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12875ctcf_spec.rb +16 -0
  6150. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12878ctcf_spec.rb +16 -0
  6151. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12878h3k27me3_spec.rb +16 -0
  6152. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12878h3k36me3_spec.rb +16 -0
  6153. data/spec/hg18/wgencodeuwchipseqrawsignalrep2gm12878h3k4me3_spec.rb +16 -0
  6154. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hek293ctcf_spec.rb +16 -0
  6155. data/spec/hg18/wgencodeuwchipseqrawsignalrep2helas3ctcf_spec.rb +16 -0
  6156. data/spec/hg18/wgencodeuwchipseqrawsignalrep2helas3h3k27me3_spec.rb +16 -0
  6157. data/spec/hg18/wgencodeuwchipseqrawsignalrep2helas3h3k36me3_spec.rb +16 -0
  6158. data/spec/hg18/wgencodeuwchipseqrawsignalrep2helas3h3k4me3_spec.rb +16 -0
  6159. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hepg2ctcf_spec.rb +16 -0
  6160. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hepg2h3k27me3_spec.rb +16 -0
  6161. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hepg2h3k4me3_spec.rb +16 -0
  6162. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hl60h3k4me3_spec.rb +16 -0
  6163. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hrectcf_spec.rb +16 -0
  6164. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hreh3k27me3_spec.rb +16 -0
  6165. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hreh3k36me3_spec.rb +16 -0
  6166. data/spec/hg18/wgencodeuwchipseqrawsignalrep2hreh3k4me3_spec.rb +16 -0
  6167. data/spec/hg18/wgencodeuwchipseqrawsignalrep2huvecctcf_spec.rb +16 -0
  6168. data/spec/hg18/wgencodeuwchipseqrawsignalrep2huvech3k27me3_spec.rb +16 -0
  6169. data/spec/hg18/wgencodeuwchipseqrawsignalrep2huvech3k36me3_spec.rb +16 -0
  6170. data/spec/hg18/wgencodeuwchipseqrawsignalrep2huvech3k4me3_spec.rb +16 -0
  6171. data/spec/hg18/wgencodeuwchipseqrawsignalrep2k562ctcf_spec.rb +16 -0
  6172. data/spec/hg18/wgencodeuwchipseqrawsignalrep2k562h3k27me3_spec.rb +16 -0
  6173. data/spec/hg18/wgencodeuwchipseqrawsignalrep2k562h3k36me3_spec.rb +16 -0
  6174. data/spec/hg18/wgencodeuwchipseqrawsignalrep2nhekctcf_spec.rb +16 -0
  6175. data/spec/hg18/wgencodeuwchipseqrawsignalrep2nhekh3k27me3_spec.rb +16 -0
  6176. data/spec/hg18/wgencodeuwchipseqrawsignalrep2nhekh3k36me3_spec.rb +16 -0
  6177. data/spec/hg18/wgencodeuwchipseqrawsignalrep2nhekh3k4me3_spec.rb +16 -0
  6178. data/spec/hg18/wgencodeuwchipseqrawsignalrep2saecctcf_spec.rb +16 -0
  6179. data/spec/hg18/wgencodeuwchipseqrawsignalrep2saech3k27me3_spec.rb +16 -0
  6180. data/spec/hg18/wgencodeuwchipseqrawsignalrep2saech3k36me3_spec.rb +16 -0
  6181. data/spec/hg18/wgencodeuwchipseqrawsignalrep2saech3k4me3_spec.rb +16 -0
  6182. data/spec/hg18/wgencodeuwchipseqrawsignalrep2sknshractcf_spec.rb +16 -0
  6183. data/spec/hg18/wgencodeuwchipseqrawsignalrep2sknshrah3k27me3_spec.rb +16 -0
  6184. data/spec/hg18/wgencodeuwchipseqrawsignalrep2sknshrah3k36me3_spec.rb +16 -0
  6185. data/spec/hg18/wgencodeuwchipseqrawsignalrep2sknshrah3k4me3_spec.rb +16 -0
  6186. data/spec/hg18/wgencodeuwchipseqrawsignalrep2werirb1ctcf_spec.rb +16 -0
  6187. data/spec/hg18/wgencodeuwdgfhotspotsgm06990_spec.rb +16 -0
  6188. data/spec/hg18/wgencodeuwdgfhotspotshepg2_spec.rb +16 -0
  6189. data/spec/hg18/wgencodeuwdgfhotspotsk562_spec.rb +16 -0
  6190. data/spec/hg18/wgencodeuwdgfhotspotssknshra_spec.rb +16 -0
  6191. data/spec/hg18/wgencodeuwdgfhotspotsth1_spec.rb +16 -0
  6192. data/spec/hg18/wgencodeuwdgfpeaksgm06990_spec.rb +16 -0
  6193. data/spec/hg18/wgencodeuwdgfpeakshepg2_spec.rb +16 -0
  6194. data/spec/hg18/wgencodeuwdgfpeaksk562_spec.rb +16 -0
  6195. data/spec/hg18/wgencodeuwdgfpeakssknshra_spec.rb +16 -0
  6196. data/spec/hg18/wgencodeuwdgfpeaksth1_spec.rb +16 -0
  6197. data/spec/hg18/wgencodeuwdgfrawsignalgm06990_spec.rb +16 -0
  6198. data/spec/hg18/wgencodeuwdgfrawsignalhepg2_spec.rb +16 -0
  6199. data/spec/hg18/wgencodeuwdgfrawsignalk562_spec.rb +16 -0
  6200. data/spec/hg18/wgencodeuwdgfrawsignalsknshra_spec.rb +16 -0
  6201. data/spec/hg18/wgencodeuwdgfrawsignalth1_spec.rb +16 -0
  6202. data/spec/hg18/wgencodeuwdgfsignalgm06990_spec.rb +16 -0
  6203. data/spec/hg18/wgencodeuwdgfsignalhepg2_spec.rb +16 -0
  6204. data/spec/hg18/wgencodeuwdgfsignalk562_spec.rb +16 -0
  6205. data/spec/hg18/wgencodeuwdgfsignalsknshra_spec.rb +16 -0
  6206. data/spec/hg18/wgencodeuwdgfsignalth1_spec.rb +16 -0
  6207. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1ag04449_spec.rb +16 -0
  6208. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1ag04450_spec.rb +16 -0
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  6211. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1ag10803_spec.rb +16 -0
  6212. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1bjtert_spec.rb +16 -0
  6213. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1caco2_spec.rb +16 -0
  6214. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1cmk_spec.rb +16 -0
  6215. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1gm06990_spec.rb +16 -0
  6216. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1gm12865_spec.rb +16 -0
  6217. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1gm12878_spec.rb +16 -0
  6218. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1h1es_spec.rb +16 -0
  6219. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1h7es_spec.rb +16 -0
  6220. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hae_spec.rb +16 -0
  6221. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hcf_spec.rb +16 -0
  6222. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hcm_spec.rb +16 -0
  6223. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hcpe_spec.rb +16 -0
  6224. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hee_spec.rb +16 -0
  6225. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1helas3_spec.rb +16 -0
  6226. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hepg2_spec.rb +16 -0
  6227. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hgf_spec.rb +16 -0
  6228. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hl60v2_spec.rb +16 -0
  6229. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hmec_spec.rb +16 -0
  6230. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hnpce_spec.rb +16 -0
  6231. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hrcepic_spec.rb +16 -0
  6232. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hre_spec.rb +16 -0
  6233. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1hrpe_spec.rb +16 -0
  6234. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1huvec_spec.rb +16 -0
  6235. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1jurkat_spec.rb +16 -0
  6236. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1k562_spec.rb +16 -0
  6237. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1mcf7_spec.rb +16 -0
  6238. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1nb4v2_spec.rb +16 -0
  6239. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1nhdfneo_spec.rb +16 -0
  6240. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1nhek_spec.rb +16 -0
  6241. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1nhlf_spec.rb +16 -0
  6242. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1panc1_spec.rb +16 -0
  6243. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1saec_spec.rb +16 -0
  6244. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1skmcv2_spec.rb +16 -0
  6245. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1sknshra_spec.rb +16 -0
  6246. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1th1_spec.rb +16 -0
  6247. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep1th2_spec.rb +16 -0
  6248. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2ag04449_spec.rb +16 -0
  6249. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2ag04450_spec.rb +16 -0
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  6251. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2ag09319_spec.rb +16 -0
  6252. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2ag10803_spec.rb +16 -0
  6253. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2bjtert_spec.rb +16 -0
  6254. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2caco2_spec.rb +16 -0
  6255. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2gm06990_spec.rb +16 -0
  6256. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2gm12865_spec.rb +16 -0
  6257. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2gm12878_spec.rb +16 -0
  6258. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hae_spec.rb +16 -0
  6259. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hcf_spec.rb +16 -0
  6260. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hcm_spec.rb +16 -0
  6261. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hcpe_spec.rb +16 -0
  6262. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hee_spec.rb +16 -0
  6263. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2helas3_spec.rb +16 -0
  6264. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hepg2_spec.rb +16 -0
  6265. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hgf_spec.rb +16 -0
  6266. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hl60_spec.rb +16 -0
  6267. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hnpce_spec.rb +16 -0
  6268. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hrcepic_spec.rb +16 -0
  6269. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hre_spec.rb +16 -0
  6270. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2hrpe_spec.rb +16 -0
  6271. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2jurkat_spec.rb +16 -0
  6272. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2k562_spec.rb +16 -0
  6273. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2mcf7_spec.rb +16 -0
  6274. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2nb4_spec.rb +16 -0
  6275. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2nhdfneo_spec.rb +16 -0
  6276. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2nhlf_spec.rb +16 -0
  6277. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2panc1_spec.rb +16 -0
  6278. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2saec_spec.rb +16 -0
  6279. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2skmc_spec.rb +16 -0
  6280. data/spec/hg18/wgencodeuwdnaseseqhotspotsrep2sknshrav2_spec.rb +16 -0
  6281. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1ag04449_spec.rb +16 -0
  6282. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1ag04450_spec.rb +16 -0
  6283. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1ag09309_spec.rb +16 -0
  6284. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1ag09319_spec.rb +16 -0
  6285. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1ag10803_spec.rb +16 -0
  6286. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1bjtert_spec.rb +16 -0
  6287. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1caco2_spec.rb +16 -0
  6288. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1cmk_spec.rb +16 -0
  6289. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1gm06990_spec.rb +16 -0
  6290. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1gm12865_spec.rb +16 -0
  6291. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1gm12878_spec.rb +16 -0
  6292. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1h1es_spec.rb +16 -0
  6293. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1h7es_spec.rb +16 -0
  6294. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hae_spec.rb +16 -0
  6295. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hcf_spec.rb +16 -0
  6296. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hcm_spec.rb +16 -0
  6297. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hcpe_spec.rb +16 -0
  6298. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hee_spec.rb +16 -0
  6299. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1helas3_spec.rb +16 -0
  6300. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hepg2_spec.rb +16 -0
  6301. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hgf_spec.rb +16 -0
  6302. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hl60v2_spec.rb +16 -0
  6303. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hmec_spec.rb +16 -0
  6304. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hnpce_spec.rb +16 -0
  6305. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hrcepic_spec.rb +16 -0
  6306. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hre_spec.rb +16 -0
  6307. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1hrpe_spec.rb +16 -0
  6308. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1huvec_spec.rb +16 -0
  6309. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1jurkat_spec.rb +16 -0
  6310. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1k562_spec.rb +16 -0
  6311. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1mcf7_spec.rb +16 -0
  6312. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1nb4v2_spec.rb +16 -0
  6313. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1nhdfneo_spec.rb +16 -0
  6314. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1nhek_spec.rb +16 -0
  6315. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1nhlf_spec.rb +16 -0
  6316. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1panc1_spec.rb +16 -0
  6317. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1saec_spec.rb +16 -0
  6318. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1skmcv2_spec.rb +16 -0
  6319. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1sknshra_spec.rb +16 -0
  6320. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1th1_spec.rb +16 -0
  6321. data/spec/hg18/wgencodeuwdnaseseqpeaksrep1th2_spec.rb +16 -0
  6322. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2ag04449_spec.rb +16 -0
  6323. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2ag04450_spec.rb +16 -0
  6324. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2ag09309_spec.rb +16 -0
  6325. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2ag09319_spec.rb +16 -0
  6326. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2ag10803_spec.rb +16 -0
  6327. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2bjtert_spec.rb +16 -0
  6328. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2caco2_spec.rb +16 -0
  6329. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2gm06990_spec.rb +16 -0
  6330. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2gm12865_spec.rb +16 -0
  6331. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2gm12878_spec.rb +16 -0
  6332. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hae_spec.rb +16 -0
  6333. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hcf_spec.rb +16 -0
  6334. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hcm_spec.rb +16 -0
  6335. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hcpe_spec.rb +16 -0
  6336. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hee_spec.rb +16 -0
  6337. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2helas3_spec.rb +16 -0
  6338. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hepg2_spec.rb +16 -0
  6339. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hgf_spec.rb +16 -0
  6340. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hl60_spec.rb +16 -0
  6341. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hnpce_spec.rb +16 -0
  6342. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hrcepic_spec.rb +16 -0
  6343. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hre_spec.rb +16 -0
  6344. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2hrpe_spec.rb +16 -0
  6345. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2jurkat_spec.rb +16 -0
  6346. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2k562_spec.rb +16 -0
  6347. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2mcf7_spec.rb +16 -0
  6348. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2nb4_spec.rb +16 -0
  6349. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2nhdfneo_spec.rb +16 -0
  6350. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2nhlf_spec.rb +16 -0
  6351. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2panc1_spec.rb +16 -0
  6352. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2saec_spec.rb +16 -0
  6353. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2skmc_spec.rb +16 -0
  6354. data/spec/hg18/wgencodeuwdnaseseqpeaksrep2sknshrav2_spec.rb +16 -0
  6355. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1ag04449_spec.rb +16 -0
  6356. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1ag04450_spec.rb +16 -0
  6357. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1ag09309_spec.rb +16 -0
  6358. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1ag09319_spec.rb +16 -0
  6359. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1ag10803_spec.rb +16 -0
  6360. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1bjtert_spec.rb +16 -0
  6361. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1caco2_spec.rb +16 -0
  6362. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1cmk_spec.rb +16 -0
  6363. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1gm06990_spec.rb +16 -0
  6364. data/spec/hg18/wgencodeuwdnaseseqrawsignalrep1gm12865_spec.rb +16 -0
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  6593. data/spec/hg18/wgencodeyalechipseqsignalgm12878rad21iggrab_spec.rb +16 -0
  6594. data/spec/hg18/wgencodeyalechipseqsignalgm12878tr4_spec.rb +16 -0
  6595. data/spec/hg18/wgencodeyalechipseqsignalgm12878yy1_spec.rb +16 -0
  6596. data/spec/hg18/wgencodeyalechipseqsignalgm12878zzz3_spec.rb +16 -0
  6597. data/spec/hg18/wgencodeyalechipseqsignalgm12891inputiggrab_spec.rb +16 -0
  6598. data/spec/hg18/wgencodeyalechipseqsignalgm12891musiggmusigg_spec.rb +16 -0
  6599. data/spec/hg18/wgencodeyalechipseqsignalgm12891nfkbiggrab_spec.rb +16 -0
  6600. data/spec/hg18/wgencodeyalechipseqsignalgm12891pol2musigg_spec.rb +16 -0
  6601. data/spec/hg18/wgencodeyalechipseqsignalgm12892inputiggrab_spec.rb +16 -0
  6602. data/spec/hg18/wgencodeyalechipseqsignalgm12892musiggmusigg_spec.rb +16 -0
  6603. data/spec/hg18/wgencodeyalechipseqsignalgm12892nfkbiggrab_spec.rb +16 -0
  6604. data/spec/hg18/wgencodeyalechipseqsignalgm12892pol2musigg_spec.rb +16 -0
  6605. data/spec/hg18/wgencodeyalechipseqsignalgm15510inputiggrab_spec.rb +16 -0
  6606. data/spec/hg18/wgencodeyalechipseqsignalgm15510musiggmusigg_spec.rb +16 -0
  6607. data/spec/hg18/wgencodeyalechipseqsignalgm15510nfkbiggrab_spec.rb +16 -0
  6608. data/spec/hg18/wgencodeyalechipseqsignalgm15510pol2musigg_spec.rb +16 -0
  6609. data/spec/hg18/wgencodeyalechipseqsignalgm18505inputiggrab_spec.rb +16 -0
  6610. data/spec/hg18/wgencodeyalechipseqsignalgm18505musiggmusigg_spec.rb +16 -0
  6611. data/spec/hg18/wgencodeyalechipseqsignalgm18505nfkbiggrab_spec.rb +16 -0
  6612. data/spec/hg18/wgencodeyalechipseqsignalgm18505pol2musigg_spec.rb +16 -0
  6613. data/spec/hg18/wgencodeyalechipseqsignalgm18526inputiggrab_spec.rb +16 -0
  6614. data/spec/hg18/wgencodeyalechipseqsignalgm18526musiggmusigg_spec.rb +16 -0
  6615. data/spec/hg18/wgencodeyalechipseqsignalgm18526nfkbiggrab_spec.rb +16 -0
  6616. data/spec/hg18/wgencodeyalechipseqsignalgm18526pol2musigg_spec.rb +16 -0
  6617. data/spec/hg18/wgencodeyalechipseqsignalgm18951inputiggrab_spec.rb +16 -0
  6618. data/spec/hg18/wgencodeyalechipseqsignalgm18951musiggmusigg_spec.rb +16 -0
  6619. data/spec/hg18/wgencodeyalechipseqsignalgm18951nfkbiggrab_spec.rb +16 -0
  6620. data/spec/hg18/wgencodeyalechipseqsignalgm18951pol2musigg_spec.rb +16 -0
  6621. data/spec/hg18/wgencodeyalechipseqsignalgm19099inputiggrab_spec.rb +16 -0
  6622. data/spec/hg18/wgencodeyalechipseqsignalgm19099musiggmusigg_spec.rb +16 -0
  6623. data/spec/hg18/wgencodeyalechipseqsignalgm19099nfkbiggrab_spec.rb +16 -0
  6624. data/spec/hg18/wgencodeyalechipseqsignalgm19099pol2musigg_spec.rb +16 -0
  6625. data/spec/hg18/wgencodeyalechipseqsignalgm19193inputiggrab_spec.rb +16 -0
  6626. data/spec/hg18/wgencodeyalechipseqsignalgm19193musiggmusigg_spec.rb +16 -0
  6627. data/spec/hg18/wgencodeyalechipseqsignalgm19193nfkbiggrab_spec.rb +16 -0
  6628. data/spec/hg18/wgencodeyalechipseqsignalgm19193pol2musigg_spec.rb +16 -0
  6629. data/spec/hg18/wgencodeyalechipseqsignalhct116pol2_spec.rb +16 -0
  6630. data/spec/hg18/wgencodeyalechipseqsignalhelas3ap2alpha_spec.rb +16 -0
  6631. data/spec/hg18/wgencodeyalechipseqsignalhelas3ap2gamma_spec.rb +16 -0
  6632. data/spec/hg18/wgencodeyalechipseqsignalhelas3baf155musigg_spec.rb +16 -0
  6633. data/spec/hg18/wgencodeyalechipseqsignalhelas3baf170musigg_spec.rb +16 -0
  6634. data/spec/hg18/wgencodeyalechipseqsignalhelas3bdp1_spec.rb +16 -0
  6635. data/spec/hg18/wgencodeyalechipseqsignalhelas3brf1_spec.rb +16 -0
  6636. data/spec/hg18/wgencodeyalechipseqsignalhelas3brf2_spec.rb +16 -0
  6637. data/spec/hg18/wgencodeyalechipseqsignalhelas3brg1iggmus_spec.rb +16 -0
  6638. data/spec/hg18/wgencodeyalechipseqsignalhelas3cfos_spec.rb +16 -0
  6639. data/spec/hg18/wgencodeyalechipseqsignalhelas3cjunrabigg_spec.rb +16 -0
  6640. data/spec/hg18/wgencodeyalechipseqsignalhelas3cmyc_spec.rb +16 -0
  6641. data/spec/hg18/wgencodeyalechipseqsignalhelas3e2f1_spec.rb +16 -0
  6642. data/spec/hg18/wgencodeyalechipseqsignalhelas3e2f4_spec.rb +16 -0
  6643. data/spec/hg18/wgencodeyalechipseqsignalhelas3e2f6_spec.rb +16 -0
  6644. data/spec/hg18/wgencodeyalechipseqsignalhelas3ha_spec.rb +16 -0
  6645. data/spec/hg18/wgencodeyalechipseqsignalhelas3ifngstat1v2_spec.rb +16 -0
  6646. data/spec/hg18/wgencodeyalechipseqsignalhelas3ini1musigg_spec.rb +16 -0
  6647. data/spec/hg18/wgencodeyalechipseqsignalhelas3jundrabigg_spec.rb +16 -0
  6648. data/spec/hg18/wgencodeyalechipseqsignalhelas3largefragmentv2_spec.rb +16 -0
  6649. data/spec/hg18/wgencodeyalechipseqsignalhelas3max_spec.rb +16 -0
  6650. data/spec/hg18/wgencodeyalechipseqsignalhelas3mnasev2_spec.rb +16 -0
  6651. data/spec/hg18/wgencodeyalechipseqsignalhelas3mouseiggv2_spec.rb +16 -0
  6652. data/spec/hg18/wgencodeyalechipseqsignalhelas3nakeddnav2_spec.rb +16 -0
  6653. data/spec/hg18/wgencodeyalechipseqsignalhelas3nrf1musigg_spec.rb +16 -0
  6654. data/spec/hg18/wgencodeyalechipseqsignalhelas3rabigg_spec.rb +16 -0
  6655. data/spec/hg18/wgencodeyalechipseqsignalhelas3rpc155_spec.rb +16 -0
  6656. data/spec/hg18/wgencodeyalechipseqsignalhelas3tfiiic_spec.rb +16 -0
  6657. data/spec/hg18/wgencodeyalechipseqsignalhelas3tr4_spec.rb +16 -0
  6658. data/spec/hg18/wgencodeyalechipseqsignalhepg2binput_spec.rb +16 -0
  6659. data/spec/hg18/wgencodeyalechipseqsignalhepg2btr4_spec.rb +16 -0
  6660. data/spec/hg18/wgencodeyalechipseqsignalhepg2cebpbforskln_spec.rb +16 -0
  6661. data/spec/hg18/wgencodeyalechipseqsignalhepg2controlforskln_spec.rb +16 -0
  6662. data/spec/hg18/wgencodeyalechipseqsignalhepg2controlinsln_spec.rb +16 -0
  6663. data/spec/hg18/wgencodeyalechipseqsignalhepg2erraforskln_spec.rb +16 -0
  6664. data/spec/hg18/wgencodeyalechipseqsignalhepg2grp20forskln_spec.rb +16 -0
  6665. data/spec/hg18/wgencodeyalechipseqsignalhepg2hnf4aforskln_spec.rb +16 -0
  6666. data/spec/hg18/wgencodeyalechipseqsignalhepg2hsf1forskln_spec.rb +16 -0
  6667. data/spec/hg18/wgencodeyalechipseqsignalhepg2pgc1aforskln_spec.rb +16 -0
  6668. data/spec/hg18/wgencodeyalechipseqsignalhepg2pol2forskln_spec.rb +16 -0
  6669. data/spec/hg18/wgencodeyalechipseqsignalhepg2pol2v2_spec.rb +16 -0
  6670. data/spec/hg18/wgencodeyalechipseqsignalhepg2srebp1ainsln_spec.rb +16 -0
  6671. data/spec/hg18/wgencodeyalechipseqsignalhepg2srebp1av2_spec.rb +16 -0
  6672. data/spec/hg18/wgencodeyalechipseqsignalhepg2srebp2v2_spec.rb +16 -0
  6673. data/spec/hg18/wgencodeyalechipseqsignalhuveccjun_spec.rb +16 -0
  6674. data/spec/hg18/wgencodeyalechipseqsignalhuvecinputstd_spec.rb +16 -0
  6675. data/spec/hg18/wgencodeyalechipseqsignalhuvecmax_spec.rb +16 -0
  6676. data/spec/hg18/wgencodeyalechipseqsignalhuvecpol2_spec.rb +16 -0
  6677. data/spec/hg18/wgencodeyalechipseqsignalk562atf3_spec.rb +16 -0
  6678. data/spec/hg18/wgencodeyalechipseqsignalk562bdp1_spec.rb +16 -0
  6679. data/spec/hg18/wgencodeyalechipseqsignalk562be2f4_spec.rb +16 -0
  6680. data/spec/hg18/wgencodeyalechipseqsignalk562be2f6_spec.rb +16 -0
  6681. data/spec/hg18/wgencodeyalechipseqsignalk562bgata2_spec.rb +16 -0
  6682. data/spec/hg18/wgencodeyalechipseqsignalk562binput_spec.rb +16 -0
  6683. data/spec/hg18/wgencodeyalechipseqsignalk562brf1_spec.rb +16 -0
  6684. data/spec/hg18/wgencodeyalechipseqsignalk562brf2_spec.rb +16 -0
  6685. data/spec/hg18/wgencodeyalechipseqsignalk562brg1musigg_spec.rb +16 -0
  6686. data/spec/hg18/wgencodeyalechipseqsignalk562bsetdb1_spec.rb +16 -0
  6687. data/spec/hg18/wgencodeyalechipseqsignalk562bsetdb1mnase_spec.rb +16 -0
  6688. data/spec/hg18/wgencodeyalechipseqsignalk562btr4_spec.rb +16 -0
  6689. data/spec/hg18/wgencodeyalechipseqsignalk562byy1_spec.rb +16 -0
  6690. data/spec/hg18/wgencodeyalechipseqsignalk562bznf274_spec.rb +16 -0
  6691. data/spec/hg18/wgencodeyalechipseqsignalk562gtf2b_spec.rb +16 -0
  6692. data/spec/hg18/wgencodeyalechipseqsignalk562ifna30cmyc_spec.rb +16 -0
  6693. data/spec/hg18/wgencodeyalechipseqsignalk562ifna30input_spec.rb +16 -0
  6694. data/spec/hg18/wgencodeyalechipseqsignalk562ifna30pol2_spec.rb +16 -0
  6695. data/spec/hg18/wgencodeyalechipseqsignalk562ifna30stat1_spec.rb +16 -0
  6696. data/spec/hg18/wgencodeyalechipseqsignalk562ifna30stat2_spec.rb +16 -0
  6697. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hcjun_spec.rb +16 -0
  6698. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hcmyc_spec.rb +16 -0
  6699. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hinput_spec.rb +16 -0
  6700. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hpol2_spec.rb +16 -0
  6701. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hstat1_spec.rb +16 -0
  6702. data/spec/hg18/wgencodeyalechipseqsignalk562ifna6hstat2_spec.rb +16 -0
  6703. data/spec/hg18/wgencodeyalechipseqsignalk562ifng30cjun_spec.rb +16 -0
  6704. data/spec/hg18/wgencodeyalechipseqsignalk562ifng30input_spec.rb +16 -0
  6705. data/spec/hg18/wgencodeyalechipseqsignalk562ifng30pol2_spec.rb +16 -0
  6706. data/spec/hg18/wgencodeyalechipseqsignalk562ifng6hcjun_spec.rb +16 -0
  6707. data/spec/hg18/wgencodeyalechipseqsignalk562ifng6hcmyc_spec.rb +16 -0
  6708. data/spec/hg18/wgencodeyalechipseqsignalk562ifng6hinput_spec.rb +16 -0
  6709. data/spec/hg18/wgencodeyalechipseqsignalk562ifng6hpol2_spec.rb +16 -0
  6710. data/spec/hg18/wgencodeyalechipseqsignalk562ini1musigg_spec.rb +16 -0
  6711. data/spec/hg18/wgencodeyalechipseqsignalk562musiggmusigg_spec.rb +16 -0
  6712. data/spec/hg18/wgencodeyalechipseqsignalk562nelfe_spec.rb +16 -0
  6713. data/spec/hg18/wgencodeyalechipseqsignalk562pol2musigg_spec.rb +16 -0
  6714. data/spec/hg18/wgencodeyalechipseqsignalk562pol3_spec.rb +16 -0
  6715. data/spec/hg18/wgencodeyalechipseqsignalk562rad21_spec.rb +16 -0
  6716. data/spec/hg18/wgencodeyalechipseqsignalk562rpc155_spec.rb +16 -0
  6717. data/spec/hg18/wgencodeyalechipseqsignalk562sirt6_spec.rb +16 -0
  6718. data/spec/hg18/wgencodeyalechipseqsignalk562stat1ifng30_spec.rb +16 -0
  6719. data/spec/hg18/wgencodeyalechipseqsignalk562stat1ifng6h_spec.rb +16 -0
  6720. data/spec/hg18/wgencodeyalechipseqsignalk562tfiiic_spec.rb +16 -0
  6721. data/spec/hg18/wgencodeyalechipseqsignalk562xrcc4_spec.rb +16 -0
  6722. data/spec/hg18/wgencodeyalechipseqsignalmcf7hae2f1_spec.rb +16 -0
  6723. data/spec/hg18/wgencodeyalechipseqsignalmcf7input_spec.rb +16 -0
  6724. data/spec/hg18/wgencodeyalechipseqsignalnt2d1input_spec.rb +16 -0
  6725. data/spec/hg18/wgencodeyalechipseqsignalnt2d1suz12_spec.rb +16 -0
  6726. data/spec/hg18/wgencodeyalechipseqsignalnt2d1yy1_spec.rb +16 -0
  6727. data/spec/hg18/wgencodeyalechipseqsignalrep1k562inputv2_spec.rb +16 -0
  6728. data/spec/hg18/wgrna_spec.rb +16 -0
  6729. data/spec/hg18/xenoest_spec.rb +16 -0
  6730. data/spec/hg18/xenomrna_spec.rb +16 -0
  6731. data/spec/hg18/xenorefflat_spec.rb +16 -0
  6732. data/spec/hg18/xenorefgene_spec.rb +16 -0
  6733. data/spec/hg18/xenorefseqali_spec.rb +16 -0
  6734. data/spec/hg18/yalebertonetars_spec.rb +16 -0
  6735. data/spec/hg19/cytobandideo_spec.rb +16 -0
  6736. data/spec/hg19/find_by_spec.rb +186 -0
  6737. data/spec/hg19/lssnppdb_spec.rb +15 -0
  6738. data/spec/hg19/ncbiincidentdb_spec.rb +8 -17
  6739. data/spec/hg19/{omimGene_spec.rb → omimgene_spec.rb} +0 -0
  6740. data/spec/hg19/omimgenemap_spec.rb +15 -0
  6741. data/spec/hg19/omimmorbidmap_spec.rb +15 -0
  6742. data/spec/hg19/omimtoknowncanonical_spec.rb +15 -0
  6743. data/spec/hg19/snp131_spec.rb +16 -0
  6744. data/spec/hg19/snp131codingdbsnp_spec.rb +16 -0
  6745. data/spec/hg19/snp131exceptions_spec.rb +16 -0
  6746. data/spec/hg19/snp131orthopt2pa2rm2_spec.rb +16 -0
  6747. data/spec/hg19/snp131seq_spec.rb +15 -0
  6748. data/spec/hg19/wgencodesunyalbanygenestgm12878celf1rbpassocrna_spec.rb +2 -2
  6749. data/spec/hg19/wgencodesunyalbanygenestgm12878t7tagrbpassocrna_spec.rb +2 -2
  6750. data/spec/hg19/wgencodesunyalbanygenesth1hesct7tagrbpassocrna_spec.rb +2 -2
  6751. data/spec/hg19/wgencodesunyalbanygenesthepg2pabpc1rbpassocrna_spec.rb +2 -2
  6752. data/spec/hg19/wgencodesunyalbanygenestk562pabpc1rbpassocrna_spec.rb +7 -5
  6753. data/spec/hg19/wgencodesunyalbanygenestk562slbprbpassocrna_spec.rb +2 -2
  6754. data/spec/hg19/wgencodesunyalbanygenestk562t7tagrbpassocrna_spec.rb +2 -2
  6755. data/spec/hg19/wgencodeuwdnaseag09319pkrep1v2_spec.rb +16 -0
  6756. data/spec/hg19/wgencodeuwdnaseh7espkrep1v2_spec.rb +16 -0
  6757. data/spec/hg19/wgencodeuwdnasehnpcepkrep2v2_spec.rb +16 -0
  6758. data/spec/hg19/wgencodeuwdnasehrepkrep1v2_spec.rb +16 -0
  6759. data/spec/hg19/wgencodeuwdnasehrepkrep2v2_spec.rb +16 -0
  6760. data/spec/hg19/wgencodeuwdnasehrpepkrep1v2_spec.rb +16 -0
  6761. data/spec/hg19/wgencodeuwdnasehrpepkrep2v2_spec.rb +16 -0
  6762. data/spec/hg19/wgencodeuwdnasehuvecpkrep1v2_spec.rb +16 -0
  6763. metadata +10114 -31
  6764. data/lib/bio-ucsc/hg19/wgencodeuwdnasehrpepkrep1.rb +0 -35
  6765. data/lib/bio-ucsc/hg19/wgencodeuwdnasehrpepkrep2.rb +0 -35
  6766. data/lib/bio-ucsc/hg19/wgencodeuwdnasehuvecpkrep1.rb +0 -35
  6767. data/spec/hg19/wgencodesunyalbanygenestk562pabpc1rbpassocrna.rb +0 -30
  6768. data/spec/hg19/wgencodeuwdnaseag09319pkrep1_spec.rb +0 -24
  6769. data/spec/hg19/wgencodeuwdnaseh7espkrep1_spec.rb +0 -24
  6770. data/spec/hg19/wgencodeuwdnasehnpcepkrep2_spec.rb +0 -24
  6771. data/spec/hg19/wgencodeuwdnasehrepkrep1_spec.rb +0 -24
  6772. data/spec/hg19/wgencodeuwdnasehrepkrep2_spec.rb +0 -24
  6773. data/spec/hg19/wgencodeuwdnasehrpepkrep1_spec.rb +0 -24
  6774. data/spec/hg19/wgencodeuwdnasehrpepkrep2_spec.rb +0 -24
  6775. data/spec/hg19/wgencodeuwdnasehuvecpkrep1_spec.rb +0 -24

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