bio-ucsc-api 0.0.4 → 0.0.5

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me1ptr8.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me1ptr8.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me1Ptr8 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me1Ptr8'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2hela.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2hela.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2HeLa < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2HeLa'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2hfl1.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2hfl1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2HFL1 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2HFL1'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2k562.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2k562.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2K562 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2K562'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2molt4.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2molt4.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2Molt4 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2Molt4'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me2ptr8.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me2ptr8.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me2Ptr8 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me2Ptr8'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3hela.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3hela.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3HeLa < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3HeLa'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3hfl1.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3hfl1.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3HFL1 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3HFL1'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3k562.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3k562.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3K562 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3K562'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3molt4.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3molt4.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3Molt4 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3Molt4'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k4me3ptr8.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k4me3ptr8.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K4me3Ptr8 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K4me3Ptr8'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k79me3.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k79me3.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K79me3 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K79me3'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph3k9me3.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph3k9me3.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH3K9me3 < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH3K9me3'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph4ac.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph4ac.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH4ac < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH4ac'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio

data/lib/bio-ucsc/hg18/encodesangerchiph4achela.rb

@@ -0,0 +1,25 @@
+# -*- coding: utf-8 -*-
+# = hg18/encodesangerchiph4achela.rb
+# Copyright::
+#  Copyright (C) 2011 MISHIMA, Hiroyuki
+#                <missy at be.to / hmishima at nagasaki-u.ac.jp> 
+# License::     The Ruby licence (Ryby's / GPLv2 dual)
+#
+# = Table desfription in UCSC Table Browser
+# Sanger ChIP - Sanger ChIP-chip (histones H3,H4 ab in GM06990, K562,
+# HeLa, and other cells)
+#
+# = ommitted dynamic method(s) due to the method name collision
+#  none
+
+module Bio
+  module Ucsc
+    module Hg18
+      class EncodeSangerChipH4acHeLa < DBConnection
+        extend Bio::Ucsc::Hg18::QueryUsingChromBin
+        set_table_name 'encodeSangerChipH4acHeLa'
+        set_primary_key nil
+      end 
+    end # module Hg18
+  end # module Ucsc
+end # Bio