bio-incanter 0.1.0
Sign up to get free protection for your applications and to get access to all the features.
- data/Gemfile +14 -0
- data/Gemfile.lock +35 -0
- data/LICENSE.txt +20 -0
- data/README.rdoc +26 -0
- data/Rakefile +51 -0
- data/VERSION +1 -0
- data/bio-incanter.gemspec +136 -0
- data/doc/AreaChart.html +473 -0
- data/doc/BarChart.html +519 -0
- data/doc/BlandAltman.html +453 -0
- data/doc/BoxPlot.html +474 -0
- data/doc/FunctionPlot.html +496 -0
- data/doc/HeatMap.html +554 -0
- data/doc/Histogram.html +444 -0
- data/doc/LICENSE_txt.html +130 -0
- data/doc/LineChart.html +479 -0
- data/doc/Object.html +278 -0
- data/doc/PieChart.html +455 -0
- data/doc/README_rdoc.html +152 -0
- data/doc/ScatterPlot.html +489 -0
- data/doc/TimeChart.html +473 -0
- data/doc/TracePlot.html +416 -0
- data/doc/XyPlot.html +477 -0
- data/doc/created.rid +18 -0
- data/doc/images/add.png +0 -0
- data/doc/images/brick.png +0 -0
- data/doc/images/brick_link.png +0 -0
- data/doc/images/bug.png +0 -0
- data/doc/images/bullet_black.png +0 -0
- data/doc/images/bullet_toggle_minus.png +0 -0
- data/doc/images/bullet_toggle_plus.png +0 -0
- data/doc/images/date.png +0 -0
- data/doc/images/delete.png +0 -0
- data/doc/images/find.png +0 -0
- data/doc/images/loadingAnimation.gif +0 -0
- data/doc/images/macFFBgHack.png +0 -0
- data/doc/images/package.png +0 -0
- data/doc/images/page_green.png +0 -0
- data/doc/images/page_white_text.png +0 -0
- data/doc/images/page_white_width.png +0 -0
- data/doc/images/plugin.png +0 -0
- data/doc/images/ruby.png +0 -0
- data/doc/images/tag_blue.png +0 -0
- data/doc/images/tag_green.png +0 -0
- data/doc/images/transparent.png +0 -0
- data/doc/images/wrench.png +0 -0
- data/doc/images/wrench_orange.png +0 -0
- data/doc/images/zoom.png +0 -0
- data/doc/index.html +106 -0
- data/doc/js/darkfish.js +153 -0
- data/doc/js/jquery.js +18 -0
- data/doc/js/navigation.js +142 -0
- data/doc/js/search.js +94 -0
- data/doc/js/search_index.js +1 -0
- data/doc/js/searcher.js +228 -0
- data/doc/rdoc.css +543 -0
- data/doc/table_of_contents.html +295 -0
- data/lib/area_chart/area_chart.rb +106 -0
- data/lib/bar_chart/bar_chart.rb +142 -0
- data/lib/bio-incanter.rb +108 -0
- data/lib/bland_altman/bland_altman.rb +120 -0
- data/lib/box_plot/box_plot.rb +136 -0
- data/lib/function_plot/function_plot.rb +137 -0
- data/lib/histogram/histogram.rb +139 -0
- data/lib/java/clocomics-1.0.0-standalone.jar +0 -0
- data/lib/line_chart/line_chart.rb +148 -0
- data/lib/pie_chart/pie_chart.rb +121 -0
- data/lib/qq_plot/qq_plot.rb +105 -0
- data/lib/scatter_plot/scatter_plot.rb +162 -0
- data/lib/time_chart/time_chart.rb +142 -0
- data/lib/trace_plot/trace_plot.rb +108 -0
- data/lib/xy_plot/xy_plot.rb +149 -0
- data/spec/bar_chart_spec.rb +25 -0
- data/spec/bland_altman_spec.rb +26 -0
- data/spec/box_plot_spec.rb +25 -0
- data/spec/function_plot_spec.rb +27 -0
- data/spec/histogram_spec.rb +24 -0
- data/spec/line_chart_spec.rb +25 -0
- data/spec/pie_chart_spec.rb +25 -0
- data/spec/qq_plot_spec.rb +24 -0
- data/spec/scatter_plot_spec.rb +26 -0
- data/spec/spec_helper.rb +13 -0
- data/spec/time_chart_spec.rb +26 -0
- data/spec/trace_plot_spec.rb +24 -0
- data/spec/xy_plot_spec.rb +25 -0
- metadata +196 -0
|
@@ -0,0 +1,152 @@
|
|
|
1
|
+
<!DOCTYPE html>
|
|
2
|
+
|
|
3
|
+
<html>
|
|
4
|
+
<head>
|
|
5
|
+
<meta content="text/html; charset=UTF-8" http-equiv="Content-Type">
|
|
6
|
+
|
|
7
|
+
<title>README - RDoc Documentation</title>
|
|
8
|
+
|
|
9
|
+
<link type="text/css" media="screen" href="./rdoc.css" rel="stylesheet">
|
|
10
|
+
|
|
11
|
+
<script type="text/javascript">
|
|
12
|
+
var rdoc_rel_prefix = "./";
|
|
13
|
+
</script>
|
|
14
|
+
|
|
15
|
+
<script type="text/javascript" charset="utf-8" src="./js/jquery.js"></script>
|
|
16
|
+
<script type="text/javascript" charset="utf-8" src="./js/navigation.js"></script>
|
|
17
|
+
<script type="text/javascript" charset="utf-8" src="./js/search_index.js"></script>
|
|
18
|
+
<script type="text/javascript" charset="utf-8" src="./js/search.js"></script>
|
|
19
|
+
<script type="text/javascript" charset="utf-8" src="./js/searcher.js"></script>
|
|
20
|
+
<script type="text/javascript" charset="utf-8" src="./js/darkfish.js"></script>
|
|
21
|
+
|
|
22
|
+
|
|
23
|
+
<body class="file">
|
|
24
|
+
<nav id="metadata">
|
|
25
|
+
<nav id="home-section" class="section">
|
|
26
|
+
<h3 class="section-header">
|
|
27
|
+
<a href="./index.html">Home</a>
|
|
28
|
+
<a href="./table_of_contents.html#classes">Classes</a>
|
|
29
|
+
<a href="./table_of_contents.html#methods">Methods</a>
|
|
30
|
+
</h3>
|
|
31
|
+
</nav>
|
|
32
|
+
|
|
33
|
+
|
|
34
|
+
<nav id="search-section" class="section project-section" class="initially-hidden">
|
|
35
|
+
<form action="#" method="get" accept-charset="utf-8">
|
|
36
|
+
<h3 class="section-header">
|
|
37
|
+
<input type="text" name="search" placeholder="Search" id="search-field"
|
|
38
|
+
title="Type to search, Up and Down to navigate, Enter to load">
|
|
39
|
+
</h3>
|
|
40
|
+
</form>
|
|
41
|
+
|
|
42
|
+
<ul id="search-results" class="initially-hidden"></ul>
|
|
43
|
+
</nav>
|
|
44
|
+
|
|
45
|
+
|
|
46
|
+
<div id="project-metadata">
|
|
47
|
+
<nav id="fileindex-section" class="section project-section">
|
|
48
|
+
<h3 class="section-header">Pages</h3>
|
|
49
|
+
|
|
50
|
+
<ul>
|
|
51
|
+
|
|
52
|
+
<li class="file"><a href="./LICENSE_txt.html">LICENSE</a>
|
|
53
|
+
|
|
54
|
+
<li class="file"><a href="./README_rdoc.html">README</a>
|
|
55
|
+
|
|
56
|
+
</ul>
|
|
57
|
+
</nav>
|
|
58
|
+
|
|
59
|
+
<nav id="classindex-section" class="section project-section">
|
|
60
|
+
<h3 class="section-header">Class and Module Index</h3>
|
|
61
|
+
|
|
62
|
+
<ul class="link-list">
|
|
63
|
+
|
|
64
|
+
<li><a href="./AreaChart.html">AreaChart</a>
|
|
65
|
+
|
|
66
|
+
<li><a href="./BarChart.html">BarChart</a>
|
|
67
|
+
|
|
68
|
+
<li><a href="./BlandAltman.html">BlandAltman</a>
|
|
69
|
+
|
|
70
|
+
<li><a href="./BoxPlot.html">BoxPlot</a>
|
|
71
|
+
|
|
72
|
+
<li><a href="./FunctionPlot.html">FunctionPlot</a>
|
|
73
|
+
|
|
74
|
+
<li><a href="./HeatMap.html">HeatMap</a>
|
|
75
|
+
|
|
76
|
+
<li><a href="./Histogram.html">Histogram</a>
|
|
77
|
+
|
|
78
|
+
<li><a href="./LineChart.html">LineChart</a>
|
|
79
|
+
|
|
80
|
+
<li><a href="./Object.html">Object</a>
|
|
81
|
+
|
|
82
|
+
<li><a href="./PieChart.html">PieChart</a>
|
|
83
|
+
|
|
84
|
+
<li><a href="./ScatterPlot.html">ScatterPlot</a>
|
|
85
|
+
|
|
86
|
+
<li><a href="./TimeChart.html">TimeChart</a>
|
|
87
|
+
|
|
88
|
+
<li><a href="./TracePlot.html">TracePlot</a>
|
|
89
|
+
|
|
90
|
+
<li><a href="./XyPlot.html">XyPlot</a>
|
|
91
|
+
|
|
92
|
+
</ul>
|
|
93
|
+
</nav>
|
|
94
|
+
|
|
95
|
+
</div>
|
|
96
|
+
</nav>
|
|
97
|
+
|
|
98
|
+
<div id="documentation" class="description">
|
|
99
|
+
|
|
100
|
+
<h1 id="label-bio-incanter">bio-incanter</h1>
|
|
101
|
+
|
|
102
|
+
<p>bio-incanter is a Jruby bio-gem for use Incanter lib. Incanter is a Clojure
|
|
103
|
+
lib to save and view graphics.</p>
|
|
104
|
+
|
|
105
|
+
<h2 id="label-Use+">Use </h2>
|
|
106
|
+
<ul><li>
|
|
107
|
+
<p>Select your plot class</p>
|
|
108
|
+
</li><li>
|
|
109
|
+
<p>Instance that class</p>
|
|
110
|
+
</li><li>
|
|
111
|
+
<p>Call save method to save your plot</p>
|
|
112
|
+
</li><li>
|
|
113
|
+
<p>Call view method to view your plot</p>
|
|
114
|
+
</li></ul>
|
|
115
|
+
|
|
116
|
+
<h2 id="label-Contributing+to+bio-incanter">Contributing to bio-incanter</h2>
|
|
117
|
+
<ul><li>
|
|
118
|
+
<p>Check out the latest master to make sure the feature hasn’t been
|
|
119
|
+
implemented or the bug hasn’t been fixed yet.</p>
|
|
120
|
+
</li><li>
|
|
121
|
+
<p>Check out the issue tracker to make sure someone already hasn’t requested
|
|
122
|
+
it and/or contributed it.</p>
|
|
123
|
+
</li><li>
|
|
124
|
+
<p>Fork the project.</p>
|
|
125
|
+
</li><li>
|
|
126
|
+
<p>Start a feature/bugfix branch.</p>
|
|
127
|
+
</li><li>
|
|
128
|
+
<p>Commit and push until you are happy with your contribution.</p>
|
|
129
|
+
</li><li>
|
|
130
|
+
<p>Make sure to add tests for it. This is important so I don’t break it in a
|
|
131
|
+
future version unintentionally.</p>
|
|
132
|
+
</li><li>
|
|
133
|
+
<p>Please try not to mess with the Rakefile, version, or history. If you want
|
|
134
|
+
to have your own version, or is otherwise necessary, that is fine, but
|
|
135
|
+
please isolate to its own commit so I can cherry-pick around it.</p>
|
|
136
|
+
</li></ul>
|
|
137
|
+
|
|
138
|
+
<h2 id="label-Copyright">Copyright</h2>
|
|
139
|
+
|
|
140
|
+
<p>Copyright © 2012 Matteo Picciolini. See <a
|
|
141
|
+
href="LICENSE_txt.html">LICENSE.txt</a> for further details.</p>
|
|
142
|
+
|
|
143
|
+
</div>
|
|
144
|
+
|
|
145
|
+
|
|
146
|
+
|
|
147
|
+
<footer id="validator-badges">
|
|
148
|
+
<p><a href="http://validator.w3.org/check/referer">[Validate]</a>
|
|
149
|
+
<p>Generated by <a href="https://github.com/rdoc/rdoc">RDoc</a> 3.12.
|
|
150
|
+
<p>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish Rdoc Generator</a> 3.
|
|
151
|
+
</footer>
|
|
152
|
+
|
|
@@ -0,0 +1,489 @@
|
|
|
1
|
+
<!DOCTYPE html>
|
|
2
|
+
|
|
3
|
+
<html>
|
|
4
|
+
<head>
|
|
5
|
+
<meta content="text/html; charset=UTF-8" http-equiv="Content-Type">
|
|
6
|
+
|
|
7
|
+
<title>class ScatterPlot - RDoc Documentation</title>
|
|
8
|
+
|
|
9
|
+
<link type="text/css" media="screen" href="./rdoc.css" rel="stylesheet">
|
|
10
|
+
|
|
11
|
+
<script type="text/javascript">
|
|
12
|
+
var rdoc_rel_prefix = "./";
|
|
13
|
+
</script>
|
|
14
|
+
|
|
15
|
+
<script type="text/javascript" charset="utf-8" src="./js/jquery.js"></script>
|
|
16
|
+
<script type="text/javascript" charset="utf-8" src="./js/navigation.js"></script>
|
|
17
|
+
<script type="text/javascript" charset="utf-8" src="./js/search_index.js"></script>
|
|
18
|
+
<script type="text/javascript" charset="utf-8" src="./js/search.js"></script>
|
|
19
|
+
<script type="text/javascript" charset="utf-8" src="./js/searcher.js"></script>
|
|
20
|
+
<script type="text/javascript" charset="utf-8" src="./js/darkfish.js"></script>
|
|
21
|
+
|
|
22
|
+
|
|
23
|
+
<body id="top" class="class">
|
|
24
|
+
<nav id="metadata">
|
|
25
|
+
<nav id="home-section" class="section">
|
|
26
|
+
<h3 class="section-header">
|
|
27
|
+
<a href="./index.html">Home</a>
|
|
28
|
+
<a href="./table_of_contents.html#classes">Classes</a>
|
|
29
|
+
<a href="./table_of_contents.html#methods">Methods</a>
|
|
30
|
+
</h3>
|
|
31
|
+
</nav>
|
|
32
|
+
|
|
33
|
+
|
|
34
|
+
<nav id="search-section" class="section project-section" class="initially-hidden">
|
|
35
|
+
<form action="#" method="get" accept-charset="utf-8">
|
|
36
|
+
<h3 class="section-header">
|
|
37
|
+
<input type="text" name="search" placeholder="Search" id="search-field"
|
|
38
|
+
title="Type to search, Up and Down to navigate, Enter to load">
|
|
39
|
+
</h3>
|
|
40
|
+
</form>
|
|
41
|
+
|
|
42
|
+
<ul id="search-results" class="initially-hidden"></ul>
|
|
43
|
+
</nav>
|
|
44
|
+
|
|
45
|
+
|
|
46
|
+
<div id="file-metadata">
|
|
47
|
+
<nav id="file-list-section" class="section">
|
|
48
|
+
<h3 class="section-header">Defined In</h3>
|
|
49
|
+
<ul>
|
|
50
|
+
<li>lib/scatter_plot/scatter_plot.rb
|
|
51
|
+
</ul>
|
|
52
|
+
</nav>
|
|
53
|
+
|
|
54
|
+
|
|
55
|
+
</div>
|
|
56
|
+
|
|
57
|
+
<div id="class-metadata">
|
|
58
|
+
|
|
59
|
+
<nav id="parent-class-section" class="section">
|
|
60
|
+
<h3 class="section-header">Parent</h3>
|
|
61
|
+
|
|
62
|
+
<p class="link"><a href="Object.html">Object</a>
|
|
63
|
+
|
|
64
|
+
</nav>
|
|
65
|
+
|
|
66
|
+
|
|
67
|
+
<!-- Method Quickref -->
|
|
68
|
+
<nav id="method-list-section" class="section">
|
|
69
|
+
<h3 class="section-header">Methods</h3>
|
|
70
|
+
|
|
71
|
+
<ul class="link-list">
|
|
72
|
+
|
|
73
|
+
<li><a href="#method-c-new">::new</a>
|
|
74
|
+
|
|
75
|
+
<li><a href="#method-i-check_par">#check_par</a>
|
|
76
|
+
|
|
77
|
+
<li><a href="#method-i-getParams">#getParams</a>
|
|
78
|
+
|
|
79
|
+
<li><a href="#method-i-getValuex">#getValuex</a>
|
|
80
|
+
|
|
81
|
+
<li><a href="#method-i-getValuey">#getValuey</a>
|
|
82
|
+
|
|
83
|
+
<li><a href="#method-i-save">#save</a>
|
|
84
|
+
|
|
85
|
+
<li><a href="#method-i-view">#view</a>
|
|
86
|
+
|
|
87
|
+
</ul>
|
|
88
|
+
</nav>
|
|
89
|
+
|
|
90
|
+
</div>
|
|
91
|
+
|
|
92
|
+
<div id="project-metadata">
|
|
93
|
+
<nav id="fileindex-section" class="section project-section">
|
|
94
|
+
<h3 class="section-header">Pages</h3>
|
|
95
|
+
|
|
96
|
+
<ul>
|
|
97
|
+
|
|
98
|
+
<li class="file"><a href="./LICENSE_txt.html">LICENSE</a>
|
|
99
|
+
|
|
100
|
+
<li class="file"><a href="./README_rdoc.html">README</a>
|
|
101
|
+
|
|
102
|
+
</ul>
|
|
103
|
+
</nav>
|
|
104
|
+
|
|
105
|
+
<nav id="classindex-section" class="section project-section">
|
|
106
|
+
<h3 class="section-header">Class and Module Index</h3>
|
|
107
|
+
|
|
108
|
+
<ul class="link-list">
|
|
109
|
+
|
|
110
|
+
<li><a href="./AreaChart.html">AreaChart</a>
|
|
111
|
+
|
|
112
|
+
<li><a href="./BarChart.html">BarChart</a>
|
|
113
|
+
|
|
114
|
+
<li><a href="./BlandAltman.html">BlandAltman</a>
|
|
115
|
+
|
|
116
|
+
<li><a href="./BoxPlot.html">BoxPlot</a>
|
|
117
|
+
|
|
118
|
+
<li><a href="./FunctionPlot.html">FunctionPlot</a>
|
|
119
|
+
|
|
120
|
+
<li><a href="./HeatMap.html">HeatMap</a>
|
|
121
|
+
|
|
122
|
+
<li><a href="./Histogram.html">Histogram</a>
|
|
123
|
+
|
|
124
|
+
<li><a href="./LineChart.html">LineChart</a>
|
|
125
|
+
|
|
126
|
+
<li><a href="./Object.html">Object</a>
|
|
127
|
+
|
|
128
|
+
<li><a href="./PieChart.html">PieChart</a>
|
|
129
|
+
|
|
130
|
+
<li><a href="./ScatterPlot.html">ScatterPlot</a>
|
|
131
|
+
|
|
132
|
+
<li><a href="./TimeChart.html">TimeChart</a>
|
|
133
|
+
|
|
134
|
+
<li><a href="./TracePlot.html">TracePlot</a>
|
|
135
|
+
|
|
136
|
+
<li><a href="./XyPlot.html">XyPlot</a>
|
|
137
|
+
|
|
138
|
+
</ul>
|
|
139
|
+
</nav>
|
|
140
|
+
|
|
141
|
+
</div>
|
|
142
|
+
</nav>
|
|
143
|
+
|
|
144
|
+
<div id="documentation">
|
|
145
|
+
<h1 class="class">class ScatterPlot</h1>
|
|
146
|
+
|
|
147
|
+
<div id="description" class="description">
|
|
148
|
+
|
|
149
|
+
</div><!-- description -->
|
|
150
|
+
|
|
151
|
+
|
|
152
|
+
|
|
153
|
+
|
|
154
|
+
<section id="5Buntitled-5D" class="documentation-section">
|
|
155
|
+
|
|
156
|
+
|
|
157
|
+
|
|
158
|
+
|
|
159
|
+
|
|
160
|
+
|
|
161
|
+
|
|
162
|
+
|
|
163
|
+
<!-- Methods -->
|
|
164
|
+
|
|
165
|
+
<section id="public-class-5Buntitled-5D-method-details" class="method-section section">
|
|
166
|
+
<h3 class="section-header">Public Class Methods</h3>
|
|
167
|
+
|
|
168
|
+
|
|
169
|
+
<div id="method-c-new" class="method-detail ">
|
|
170
|
+
|
|
171
|
+
<div class="method-heading">
|
|
172
|
+
<span class="method-name">new</span><span
|
|
173
|
+
class="method-args">(valuex,valuey,params)</span>
|
|
174
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
175
|
+
</div>
|
|
176
|
+
|
|
177
|
+
|
|
178
|
+
<div class="method-description">
|
|
179
|
+
|
|
180
|
+
|
|
181
|
+
|
|
182
|
+
|
|
183
|
+
|
|
184
|
+
<div class="method-source-code" id="new-source">
|
|
185
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 2</span>
|
|
186
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">valuex</span>,<span class="ruby-identifier">valuey</span>,<span class="ruby-identifier">params</span>)
|
|
187
|
+
<span class="ruby-ivar">@value_x</span>=<span class="ruby-identifier">check_val</span>(<span class="ruby-identifier">valuex</span>)
|
|
188
|
+
<span class="ruby-ivar">@value_y</span>=<span class="ruby-identifier">check_val</span>(<span class="ruby-identifier">valuey</span>)
|
|
189
|
+
<span class="ruby-ivar">@params</span>=<span class="ruby-keyword">self</span>.<span class="ruby-identifier">check_par</span>(<span class="ruby-identifier">params</span>)
|
|
190
|
+
<span class="ruby-keyword">end</span></pre>
|
|
191
|
+
</div><!-- new-source -->
|
|
192
|
+
|
|
193
|
+
</div>
|
|
194
|
+
|
|
195
|
+
|
|
196
|
+
|
|
197
|
+
|
|
198
|
+
</div><!-- new-method -->
|
|
199
|
+
|
|
200
|
+
|
|
201
|
+
</section><!-- public-class-method-details -->
|
|
202
|
+
|
|
203
|
+
<section id="public-instance-5Buntitled-5D-method-details" class="method-section section">
|
|
204
|
+
<h3 class="section-header">Public Instance Methods</h3>
|
|
205
|
+
|
|
206
|
+
|
|
207
|
+
<div id="method-i-check_par" class="method-detail ">
|
|
208
|
+
|
|
209
|
+
<div class="method-heading">
|
|
210
|
+
<span class="method-name">check_par</span><span
|
|
211
|
+
class="method-args">(params)</span>
|
|
212
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
213
|
+
</div>
|
|
214
|
+
|
|
215
|
+
|
|
216
|
+
<div class="method-description">
|
|
217
|
+
|
|
218
|
+
|
|
219
|
+
|
|
220
|
+
|
|
221
|
+
|
|
222
|
+
<div class="method-source-code" id="check_par-source">
|
|
223
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 8</span>
|
|
224
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">check_par</span>(<span class="ruby-identifier">params</span>)
|
|
225
|
+
<span class="ruby-identifier">hash</span> = <span class="ruby-constant">Hash</span>.<span class="ruby-identifier">new</span>
|
|
226
|
+
<span class="ruby-identifier">permitted</span> = [<span class="ruby-string">"title"</span>,<span class="ruby-string">"x_label"</span>,<span class="ruby-string">"y_label"</span>,<span class="ruby-string">"vertical"</span>,<span class="ruby-string">"n_bins"</span>,<span class="ruby-string">"density"</span>,<span class="ruby-string">"gruop_by"</span>,<span class="ruby-string">"gradient"</span>,<span class="ruby-string">"legend"</span>,<span class="ruby-string">"width"</span>,<span class="ruby-string">"height"</span>,<span class="ruby-string">"file_name"</span>]
|
|
227
|
+
<span class="ruby-identifier">keys</span> = <span class="ruby-identifier">params</span>.<span class="ruby-identifier">keys</span>
|
|
228
|
+
<span class="ruby-identifier">keys</span>.<span class="ruby-identifier">each</span>{ <span class="ruby-operator">|</span><span class="ruby-identifier">key</span><span class="ruby-operator">|</span>
|
|
229
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">permitted</span>.<span class="ruby-identifier">include?</span>(<span class="ruby-identifier">key</span>)<span class="ruby-operator">==</span><span class="ruby-keyword">false</span>
|
|
230
|
+
<span class="ruby-identifier">raise</span> <span class="ruby-string">"Error : Permitted key are title,x_label,y_label,vertical,n_bins,density,group_by,gardient,legend,width,height"</span>
|
|
231
|
+
<span class="ruby-keyword">end</span>
|
|
232
|
+
}
|
|
233
|
+
|
|
234
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"title"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
235
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"title"</span>]=<span class="ruby-string">"A sample Graph"</span>
|
|
236
|
+
<span class="ruby-keyword">else</span>
|
|
237
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"title"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"title"</span>]
|
|
238
|
+
<span class="ruby-keyword">end</span>
|
|
239
|
+
|
|
240
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"x_label"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
241
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"x_label"</span>]=<span class="ruby-string">"Categories"</span>
|
|
242
|
+
<span class="ruby-keyword">else</span>
|
|
243
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"x_label"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"x_label"</span>]
|
|
244
|
+
<span class="ruby-keyword">end</span>
|
|
245
|
+
|
|
246
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"y_label"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
247
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"y_label"</span>]=<span class="ruby-string">"Values"</span>
|
|
248
|
+
<span class="ruby-keyword">else</span>
|
|
249
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"y_label"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"y_label"</span>]
|
|
250
|
+
<span class="ruby-keyword">end</span>
|
|
251
|
+
|
|
252
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"vertical"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
253
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"vertical"</span>]=<span class="ruby-keyword">true</span>
|
|
254
|
+
<span class="ruby-keyword">else</span>
|
|
255
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"vertical"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"vertical"</span>]
|
|
256
|
+
<span class="ruby-keyword">end</span>
|
|
257
|
+
|
|
258
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"legend"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
259
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"legend"</span>]=<span class="ruby-keyword">false</span>
|
|
260
|
+
<span class="ruby-keyword">else</span>
|
|
261
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"legend"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"legend"</span>]
|
|
262
|
+
<span class="ruby-keyword">end</span>
|
|
263
|
+
|
|
264
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"n_bins"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
265
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"n_bins"</span>]=<span class="ruby-value">10</span>
|
|
266
|
+
<span class="ruby-keyword">else</span>
|
|
267
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"n_bins"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"n_bins"</span>]
|
|
268
|
+
<span class="ruby-keyword">end</span>
|
|
269
|
+
|
|
270
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"density"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
271
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"density"</span>]=<span class="ruby-keyword">false</span>
|
|
272
|
+
<span class="ruby-keyword">else</span>
|
|
273
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"density"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"density"</span>]
|
|
274
|
+
<span class="ruby-keyword">end</span>
|
|
275
|
+
|
|
276
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"group_by"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
277
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"group_by"</span>]=<span class="ruby-keyword">nil</span>
|
|
278
|
+
<span class="ruby-keyword">else</span>
|
|
279
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"group_by"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"group_by"</span>]
|
|
280
|
+
<span class="ruby-keyword">end</span>
|
|
281
|
+
|
|
282
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"gradient"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
283
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"gradient"</span>]=<span class="ruby-keyword">false</span>
|
|
284
|
+
<span class="ruby-keyword">else</span>
|
|
285
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"gradient"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"gradient"</span>]
|
|
286
|
+
<span class="ruby-keyword">end</span>
|
|
287
|
+
|
|
288
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"width"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
289
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"width"</span>]=<span class="ruby-value">1500</span>
|
|
290
|
+
<span class="ruby-keyword">else</span>
|
|
291
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"width"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"width"</span>]
|
|
292
|
+
<span class="ruby-keyword">end</span>
|
|
293
|
+
|
|
294
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"height"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
295
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"height"</span>]=<span class="ruby-value">800</span>
|
|
296
|
+
<span class="ruby-keyword">else</span>
|
|
297
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"height"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"height"</span>]
|
|
298
|
+
<span class="ruby-keyword">end</span>
|
|
299
|
+
|
|
300
|
+
<span class="ruby-keyword">if</span> <span class="ruby-identifier">params</span>[<span class="ruby-string">"file_name"</span>]<span class="ruby-operator">==</span><span class="ruby-keyword">nil</span>
|
|
301
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"file_name"</span>]=<span class="ruby-string">"sample.jpg"</span>
|
|
302
|
+
<span class="ruby-keyword">else</span>
|
|
303
|
+
<span class="ruby-identifier">hash</span>[<span class="ruby-string">"file_name"</span>]=<span class="ruby-identifier">params</span>[<span class="ruby-string">"file_name"</span>]
|
|
304
|
+
<span class="ruby-keyword">end</span>
|
|
305
|
+
|
|
306
|
+
<span class="ruby-identifier">params_map</span> = <span class="ruby-constant">HashMap</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">hash</span>)
|
|
307
|
+
<span class="ruby-keyword">return</span> <span class="ruby-identifier">params_map</span>
|
|
308
|
+
<span class="ruby-keyword">end</span></pre>
|
|
309
|
+
</div><!-- check_par-source -->
|
|
310
|
+
|
|
311
|
+
</div>
|
|
312
|
+
|
|
313
|
+
|
|
314
|
+
|
|
315
|
+
|
|
316
|
+
</div><!-- check_par-method -->
|
|
317
|
+
|
|
318
|
+
|
|
319
|
+
<div id="method-i-getParams" class="method-detail ">
|
|
320
|
+
|
|
321
|
+
<div class="method-heading">
|
|
322
|
+
<span class="method-name">getParams</span><span
|
|
323
|
+
class="method-args">()</span>
|
|
324
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
325
|
+
</div>
|
|
326
|
+
|
|
327
|
+
|
|
328
|
+
<div class="method-description">
|
|
329
|
+
|
|
330
|
+
|
|
331
|
+
|
|
332
|
+
|
|
333
|
+
|
|
334
|
+
<div class="method-source-code" id="getParams-source">
|
|
335
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 103</span>
|
|
336
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">getParams</span>
|
|
337
|
+
<span class="ruby-ivar">@params</span>
|
|
338
|
+
<span class="ruby-keyword">end</span></pre>
|
|
339
|
+
</div><!-- getParams-source -->
|
|
340
|
+
|
|
341
|
+
</div>
|
|
342
|
+
|
|
343
|
+
|
|
344
|
+
|
|
345
|
+
|
|
346
|
+
</div><!-- getParams-method -->
|
|
347
|
+
|
|
348
|
+
|
|
349
|
+
<div id="method-i-getValuex" class="method-detail ">
|
|
350
|
+
|
|
351
|
+
<div class="method-heading">
|
|
352
|
+
<span class="method-name">getValuex</span><span
|
|
353
|
+
class="method-args">()</span>
|
|
354
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
355
|
+
</div>
|
|
356
|
+
|
|
357
|
+
|
|
358
|
+
<div class="method-description">
|
|
359
|
+
|
|
360
|
+
|
|
361
|
+
|
|
362
|
+
|
|
363
|
+
|
|
364
|
+
<div class="method-source-code" id="getValuex-source">
|
|
365
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 94</span>
|
|
366
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">getValuex</span>
|
|
367
|
+
<span class="ruby-ivar">@value_x</span>
|
|
368
|
+
<span class="ruby-keyword">end</span></pre>
|
|
369
|
+
</div><!-- getValuex-source -->
|
|
370
|
+
|
|
371
|
+
</div>
|
|
372
|
+
|
|
373
|
+
|
|
374
|
+
|
|
375
|
+
|
|
376
|
+
</div><!-- getValuex-method -->
|
|
377
|
+
|
|
378
|
+
|
|
379
|
+
<div id="method-i-getValuey" class="method-detail ">
|
|
380
|
+
|
|
381
|
+
<div class="method-heading">
|
|
382
|
+
<span class="method-name">getValuey</span><span
|
|
383
|
+
class="method-args">()</span>
|
|
384
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
385
|
+
</div>
|
|
386
|
+
|
|
387
|
+
|
|
388
|
+
<div class="method-description">
|
|
389
|
+
|
|
390
|
+
|
|
391
|
+
|
|
392
|
+
|
|
393
|
+
|
|
394
|
+
<div class="method-source-code" id="getValuey-source">
|
|
395
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 98</span>
|
|
396
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">getValuey</span>
|
|
397
|
+
<span class="ruby-ivar">@value_y</span>
|
|
398
|
+
<span class="ruby-keyword">end</span></pre>
|
|
399
|
+
</div><!-- getValuey-source -->
|
|
400
|
+
|
|
401
|
+
</div>
|
|
402
|
+
|
|
403
|
+
|
|
404
|
+
|
|
405
|
+
|
|
406
|
+
</div><!-- getValuey-method -->
|
|
407
|
+
|
|
408
|
+
|
|
409
|
+
<div id="method-i-save" class="method-detail ">
|
|
410
|
+
|
|
411
|
+
<div class="method-heading">
|
|
412
|
+
<span class="method-name">save</span><span
|
|
413
|
+
class="method-args">()</span>
|
|
414
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
415
|
+
</div>
|
|
416
|
+
|
|
417
|
+
|
|
418
|
+
<div class="method-description">
|
|
419
|
+
|
|
420
|
+
|
|
421
|
+
|
|
422
|
+
|
|
423
|
+
|
|
424
|
+
<div class="method-source-code" id="save-source">
|
|
425
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 108</span>
|
|
426
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">save</span>
|
|
427
|
+
<span class="ruby-keyword">begin</span>
|
|
428
|
+
<span class="ruby-identifier">a</span> = <span class="ruby-constant">Java</span><span class="ruby-operator">::</span><span class="ruby-constant">ComDomain</span><span class="ruby-operator">::</span><span class="ruby-identifier">clocomics</span>
|
|
429
|
+
<span class="ruby-identifier">a</span>.<span class="ruby-identifier">save_scatter</span>(<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getValuex</span>,<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getValuey</span>,<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getParams</span>)
|
|
430
|
+
<span class="ruby-keyword">rescue</span> <span class="ruby-constant">Exception</span> =<span class="ruby-operator">></span> <span class="ruby-identifier">ex</span>
|
|
431
|
+
<span class="ruby-keyword">end</span>
|
|
432
|
+
<span class="ruby-keyword">end</span></pre>
|
|
433
|
+
</div><!-- save-source -->
|
|
434
|
+
|
|
435
|
+
</div>
|
|
436
|
+
|
|
437
|
+
|
|
438
|
+
|
|
439
|
+
|
|
440
|
+
</div><!-- save-method -->
|
|
441
|
+
|
|
442
|
+
|
|
443
|
+
<div id="method-i-view" class="method-detail ">
|
|
444
|
+
|
|
445
|
+
<div class="method-heading">
|
|
446
|
+
<span class="method-name">view</span><span
|
|
447
|
+
class="method-args">()</span>
|
|
448
|
+
<span class="method-click-advice">click to toggle source</span>
|
|
449
|
+
</div>
|
|
450
|
+
|
|
451
|
+
|
|
452
|
+
<div class="method-description">
|
|
453
|
+
|
|
454
|
+
|
|
455
|
+
|
|
456
|
+
|
|
457
|
+
|
|
458
|
+
<div class="method-source-code" id="view-source">
|
|
459
|
+
<pre><span class="ruby-comment"># File lib/scatter_plot/scatter_plot.rb, line 115</span>
|
|
460
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier">view</span>
|
|
461
|
+
<span class="ruby-keyword">begin</span>
|
|
462
|
+
<span class="ruby-identifier">a</span> = <span class="ruby-constant">Java</span><span class="ruby-operator">::</span><span class="ruby-constant">ComDomain</span><span class="ruby-operator">::</span><span class="ruby-identifier">clocomics</span>
|
|
463
|
+
<span class="ruby-identifier">a</span>.<span class="ruby-identifier">view_scatter</span>(<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getValuex</span>,<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getValuey</span>,<span class="ruby-keyword">self</span>.<span class="ruby-identifier">getParams</span>)
|
|
464
|
+
<span class="ruby-keyword">rescue</span> <span class="ruby-constant">Exception</span> =<span class="ruby-operator">></span> <span class="ruby-identifier">ex</span>
|
|
465
|
+
<span class="ruby-keyword">end</span>
|
|
466
|
+
<span class="ruby-keyword">end</span></pre>
|
|
467
|
+
</div><!-- view-source -->
|
|
468
|
+
|
|
469
|
+
</div>
|
|
470
|
+
|
|
471
|
+
|
|
472
|
+
|
|
473
|
+
|
|
474
|
+
</div><!-- view-method -->
|
|
475
|
+
|
|
476
|
+
|
|
477
|
+
</section><!-- public-instance-method-details -->
|
|
478
|
+
|
|
479
|
+
</section><!-- 5Buntitled-5D -->
|
|
480
|
+
|
|
481
|
+
</div><!-- documentation -->
|
|
482
|
+
|
|
483
|
+
|
|
484
|
+
<footer id="validator-badges">
|
|
485
|
+
<p><a href="http://validator.w3.org/check/referer">[Validate]</a>
|
|
486
|
+
<p>Generated by <a href="https://github.com/rdoc/rdoc">RDoc</a> 3.12.
|
|
487
|
+
<p>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish Rdoc Generator</a> 3.
|
|
488
|
+
</footer>
|
|
489
|
+
|