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abstractor 1.0.8

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data/lib/lingscope/dist/javadoc/lingscope/algorithms/AbnerTokenizer.html ADDED Viewed

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+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
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+<!-- Generated by javadoc (build 1.6.0_65) on Tue Feb 18 19:45:41 CST 2014 -->
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+<TITLE>
+AbnerTokenizer
+</TITLE>
+<META NAME="date" CONTENT="2014-02-18">
+<LINK REL ="stylesheet" TYPE="text/css" HREF="../../stylesheet.css" TITLE="Style">
+<SCRIPT type="text/javascript">
+function windowTitle()
+{
+    if (location.href.indexOf('is-external=true') == -1) {
+        parent.document.title="AbnerTokenizer";
+    }
+}
+</SCRIPT>
+<NOSCRIPT>
+</NOSCRIPT>
+</HEAD>
+<BODY BGCOLOR="white" onload="windowTitle();">
+<HR>
+<!-- ========= START OF TOP NAVBAR ======= -->
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+  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="class-use/AbnerTokenizer.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>
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+</EM>
+</TD>
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+<TR>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+&nbsp;PREV CLASS&nbsp;
+&nbsp;<A HREF="../../lingscope/algorithms/AnnotationComparer.html" title="class in lingscope.algorithms"><B>NEXT CLASS</B></A></FONT></TD>
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+  SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD>
+<TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
+DETAIL:&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_detail">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD>
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+<A NAME="skip-navbar_top"></A>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<HR>
+<!-- ======== START OF CLASS DATA ======== -->
+<H2>
+<FONT SIZE="-1">
+lingscope.algorithms</FONT>
+<BR>
+Class AbnerTokenizer</H2>
+<PRE>
+java.lang.Object
+  <IMG SRC="../../resources/inherit.gif" ALT="extended by "><B>lingscope.algorithms.AbnerTokenizer</B>
+</PRE>
+<HR>
+<DL>
+<DT><PRE>public class <B>AbnerTokenizer</B><DT>extends java.lang.Object</DL>
+</PRE>
+<P>
+<HR>
+<P>
+<!-- ======== CONSTRUCTOR SUMMARY ======== -->
+<A NAME="constructor_summary"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
+<B>Constructor Summary</B></FONT></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AbnerTokenizer.html#AbnerTokenizer()">AbnerTokenizer</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+</TABLE>
+&nbsp;
+<!-- ========== METHOD SUMMARY =========== -->
+<A NAME="method_summary"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
+<B>Method Summary</B></FONT></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>static&nbsp;java.lang.String</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AbnerTokenizer.html#splitTermsByPunctuation(java.lang.String)">splitTermsByPunctuation</A></B>(java.lang.String&nbsp;input)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Takes an input and splits the sentence by punctuations and spaces, then
+ stitches it back together with a space and returns</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>static&nbsp;java.lang.String</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AbnerTokenizer.html#tokenize(java.lang.String)">tokenize</A></B>(java.lang.String&nbsp;s)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Take raw text apply ABNER's built-in tokenization on it.</TD>
+</TR>
+</TABLE>
+&nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">
+<TH ALIGN="left"><B>Methods inherited from class java.lang.Object</B></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD><CODE>clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</CODE></TD>
+</TR>
+</TABLE>
+&nbsp;
+<P>
+<!-- ========= CONSTRUCTOR DETAIL ======== -->
+<A NAME="constructor_detail"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">
+<B>Constructor Detail</B></FONT></TH>
+</TR>
+</TABLE>
+<A NAME="AbnerTokenizer()"><!-- --></A><H3>
+AbnerTokenizer</H3>
+<PRE>
+public <B>AbnerTokenizer</B>()</PRE>
+<DL>
+</DL>
+<!-- ============ METHOD DETAIL ========== -->
+<A NAME="method_detail"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">
+<B>Method Detail</B></FONT></TH>
+</TR>
+</TABLE>
+<A NAME="tokenize(java.lang.String)"><!-- --></A><H3>
+tokenize</H3>
+<PRE>
+public static java.lang.String <B>tokenize</B>(java.lang.String&nbsp;s)</PRE>
+<DL>
+<DD><p>Take raw text apply ABNER's built-in tokenization on it.
+<P>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="splitTermsByPunctuation(java.lang.String)"><!-- --></A><H3>
+splitTermsByPunctuation</H3>
+<PRE>
+public static java.lang.String <B>splitTermsByPunctuation</B>(java.lang.String&nbsp;input)</PRE>
+<DL>
+<DD>Takes an input and splits the sentence by punctuations and spaces, then
+ stitches it back together with a space and returns
+<P>
+<DD><DL>
+<DT><B>Parameters:</B><DD><CODE>input</CODE> - the input string to process
+<DT><B>Returns:</B><DD>processed input string, where all words and punctuations are
+ seperated by space</DL>
+</DD>
+</DL>
+<!-- ========= END OF CLASS DATA ========= -->
+<HR>
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<A NAME="navbar_bottom"><!-- --></A>
+<A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>
+<TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">
+<TR>
+<TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">
+<A NAME="navbar_bottom_firstrow"><!-- --></A>
+<TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">
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+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="class-use/AbnerTokenizer.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>
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+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>
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+  </TR>
+</TABLE>
+</TD>
+<TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>
+</EM>
+</TD>
+</TR>
+<TR>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+&nbsp;PREV CLASS&nbsp;
+&nbsp;<A HREF="../../lingscope/algorithms/AnnotationComparer.html" title="class in lingscope.algorithms"><B>NEXT CLASS</B></A></FONT></TD>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+  <A HREF="../../index.html?lingscope/algorithms/AbnerTokenizer.html" target="_top"><B>FRAMES</B></A>  &nbsp;
+&nbsp;<A HREF="AbnerTokenizer.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;
+&nbsp;<SCRIPT type="text/javascript">
+  <!--
+  if(window==top) {
+    document.writeln('<A HREF="../../allclasses-noframe.html"><B>All Classes</B></A>');
+  }
+  //-->
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+  SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD>
+<TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
+DETAIL:&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_detail">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD>
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+<A NAME="skip-navbar_bottom"></A>
+<!-- ======== END OF BOTTOM NAVBAR ======= -->
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+</BODY>
+</HTML>

data/lib/lingscope/dist/javadoc/lingscope/algorithms/AnnotationComparer.html ADDED Viewed

@@ -0,0 +1,526 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
+<!--NewPage-->
+<HTML>
+<HEAD>
+<!-- Generated by javadoc (build 1.6.0_65) on Tue Feb 18 19:45:41 CST 2014 -->
+<META http-equiv="Content-Type" content="text/html; charset=UTF-8">
+<TITLE>
+AnnotationComparer
+</TITLE>
+<META NAME="date" CONTENT="2014-02-18">
+<LINK REL ="stylesheet" TYPE="text/css" HREF="../../stylesheet.css" TITLE="Style">
+<SCRIPT type="text/javascript">
+function windowTitle()
+{
+    if (location.href.indexOf('is-external=true') == -1) {
+        parent.document.title="AnnotationComparer";
+    }
+}
+</SCRIPT>
+<NOSCRIPT>
+</NOSCRIPT>
+</HEAD>
+<BODY BGCOLOR="white" onload="windowTitle();">
+<HR>
+<!-- ========= START OF TOP NAVBAR ======= -->
+<A NAME="navbar_top"><!-- --></A>
+<A HREF="#skip-navbar_top" title="Skip navigation links"></A>
+<TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">
+<TR>
+<TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">
+<A NAME="navbar_top_firstrow"><!-- --></A>
+<TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">
+  <TR ALIGN="center" VALIGN="top">
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="class-use/AnnotationComparer.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../index-files/index-1.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>
+  </TR>
+</TABLE>
+</TD>
+<TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>
+</EM>
+</TD>
+</TR>
+<TR>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+&nbsp;<A HREF="../../lingscope/algorithms/AbnerTokenizer.html" title="class in lingscope.algorithms"><B>PREV CLASS</B></A>&nbsp;
+&nbsp;<A HREF="../../lingscope/algorithms/Annotator.html" title="class in lingscope.algorithms"><B>NEXT CLASS</B></A></FONT></TD>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+  <A HREF="../../index.html?lingscope/algorithms/AnnotationComparer.html" target="_top"><B>FRAMES</B></A>  &nbsp;
+&nbsp;<A HREF="AnnotationComparer.html" target="_top"><B>NO FRAMES</B></A>  &nbsp;
+&nbsp;<SCRIPT type="text/javascript">
+  <!--
+  if(window==top) {
+    document.writeln('<A HREF="../../allclasses-noframe.html"><B>All Classes</B></A>');
+  }
+  //-->
+</SCRIPT>
+<NOSCRIPT>
+  <A HREF="../../allclasses-noframe.html"><B>All Classes</B></A>
+</NOSCRIPT>
+</FONT></TD>
+</TR>
+<TR>
+<TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
+  SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD>
+<TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
+DETAIL:&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_detail">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD>
+</TR>
+</TABLE>
+<A NAME="skip-navbar_top"></A>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<HR>
+<!-- ======== START OF CLASS DATA ======== -->
+<H2>
+<FONT SIZE="-1">
+lingscope.algorithms</FONT>
+<BR>
+Class AnnotationComparer</H2>
+<PRE>
+java.lang.Object
+  <IMG SRC="../../resources/inherit.gif" ALT="extended by "><B>lingscope.algorithms.AnnotationComparer</B>
+</PRE>
+<HR>
+<DL>
+<DT><PRE>public class <B>AnnotationComparer</B><DT>extends java.lang.Object</DL>
+</PRE>
+<P>
+Compares two annotations or two annotation files
+<P>
+<P>
+<HR>
+<P>
+<!-- ======== CONSTRUCTOR SUMMARY ======== -->
+<A NAME="constructor_summary"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
+<B>Constructor Summary</B></FONT></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#AnnotationComparer(int)">AnnotationComparer</A></B>(int&nbsp;numFolds)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+</TABLE>
+&nbsp;
+<!-- ========== METHOD SUMMARY =========== -->
+<A NAME="method_summary"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
+<B>Method Summary</B></FONT></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;void</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#compareAnnotationFiles(java.lang.String, java.lang.String)">compareAnnotationFiles</A></B>(java.lang.String&nbsp;goldFile,
+                       java.lang.String&nbsp;testFile)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;void</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#compareAnnotations(lingscope.structures.AnnotatedSentence, lingscope.structures.AnnotatedSentence)">compareAnnotations</A></B>(<A HREF="../../lingscope/structures/AnnotatedSentence.html" title="class in lingscope.structures">AnnotatedSentence</A>&nbsp;goldSentence,
+                   <A HREF="../../lingscope/structures/AnnotatedSentence.html" title="class in lingscope.structures">AnnotatedSentence</A>&nbsp;testSentence)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double[]</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getAccuracies()">getAccuracies</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getAccuracy(double, double, double, double)">getAccuracy</A></B>(double&nbsp;tp,
+            double&nbsp;fp,
+            double&nbsp;fn,
+            double&nbsp;tn)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getFScore(double, double)">getFScore</A></B>(double&nbsp;recall,
+          double&nbsp;precision)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double[]</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getFScores(double[], double[])">getFScores</A></B>(double[]&nbsp;recalls,
+           double[]&nbsp;precisions)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double[]</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getPerfectAccuracies()">getPerfectAccuracies</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getPerfectAccuracy(double, double)">getPerfectAccuracy</A></B>(double&nbsp;trues,
+                   double&nbsp;total)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getPrecision(double, double)">getPrecision</A></B>(double&nbsp;tp,
+             double&nbsp;fp)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double[]</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getPrecisions()">getPrecisions</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getRecall(double, double)">getRecall</A></B>(double&nbsp;tp,
+          double&nbsp;fn)</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;double[]</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#getRecalls()">getRecalls</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;void</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#printStats()">printStats</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
+<CODE>&nbsp;void</CODE></FONT></TD>
+<TD><CODE><B><A HREF="../../lingscope/algorithms/AnnotationComparer.html#reset()">reset</A></B>()</CODE>
+<BR>
+&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Resets the values for the comparer</TD>
+</TR>
+</TABLE>
+&nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">
+<TH ALIGN="left"><B>Methods inherited from class java.lang.Object</B></TH>
+</TR>
+<TR BGCOLOR="white" CLASS="TableRowColor">
+<TD><CODE>clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</CODE></TD>
+</TR>
+</TABLE>
+&nbsp;
+<P>
+<!-- ========= CONSTRUCTOR DETAIL ======== -->
+<A NAME="constructor_detail"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">
+<B>Constructor Detail</B></FONT></TH>
+</TR>
+</TABLE>
+<A NAME="AnnotationComparer(int)"><!-- --></A><H3>
+AnnotationComparer</H3>
+<PRE>
+public <B>AnnotationComparer</B>(int&nbsp;numFolds)</PRE>
+<DL>
+</DL>
+<!-- ============ METHOD DETAIL ========== -->
+<A NAME="method_detail"><!-- --></A>
+<TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
+<TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
+<TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2">
+<B>Method Detail</B></FONT></TH>
+</TR>
+</TABLE>
+<A NAME="reset()"><!-- --></A><H3>
+reset</H3>
+<PRE>
+public final void <B>reset</B>()</PRE>
+<DL>
+<DD>Resets the values for the comparer
+<P>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="compareAnnotationFiles(java.lang.String, java.lang.String)"><!-- --></A><H3>
+compareAnnotationFiles</H3>
+<PRE>
+public void <B>compareAnnotationFiles</B>(java.lang.String&nbsp;goldFile,
+                                   java.lang.String&nbsp;testFile)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="compareAnnotations(lingscope.structures.AnnotatedSentence, lingscope.structures.AnnotatedSentence)"><!-- --></A><H3>
+compareAnnotations</H3>
+<PRE>
+public void <B>compareAnnotations</B>(<A HREF="../../lingscope/structures/AnnotatedSentence.html" title="class in lingscope.structures">AnnotatedSentence</A>&nbsp;goldSentence,
+                               <A HREF="../../lingscope/structures/AnnotatedSentence.html" title="class in lingscope.structures">AnnotatedSentence</A>&nbsp;testSentence)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="printStats()"><!-- --></A><H3>
+printStats</H3>
+<PRE>
+public void <B>printStats</B>()</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getRecalls()"><!-- --></A><H3>
+getRecalls</H3>
+<PRE>
+public double[] <B>getRecalls</B>()</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getPrecisions()"><!-- --></A><H3>
+getPrecisions</H3>
+<PRE>
+public double[] <B>getPrecisions</B>()</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getFScores(double[], double[])"><!-- --></A><H3>
+getFScores</H3>
+<PRE>
+public double[] <B>getFScores</B>(double[]&nbsp;recalls,
+                           double[]&nbsp;precisions)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getAccuracies()"><!-- --></A><H3>
+getAccuracies</H3>
+<PRE>
+public double[] <B>getAccuracies</B>()</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getPerfectAccuracies()"><!-- --></A><H3>
+getPerfectAccuracies</H3>
+<PRE>
+public double[] <B>getPerfectAccuracies</B>()</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getPerfectAccuracy(double, double)"><!-- --></A><H3>
+getPerfectAccuracy</H3>
+<PRE>
+public double <B>getPerfectAccuracy</B>(double&nbsp;trues,
+                                 double&nbsp;total)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getAccuracy(double, double, double, double)"><!-- --></A><H3>
+getAccuracy</H3>
+<PRE>
+public double <B>getAccuracy</B>(double&nbsp;tp,
+                          double&nbsp;fp,
+                          double&nbsp;fn,
+                          double&nbsp;tn)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getRecall(double, double)"><!-- --></A><H3>
+getRecall</H3>
+<PRE>
+public double <B>getRecall</B>(double&nbsp;tp,
+                        double&nbsp;fn)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getPrecision(double, double)"><!-- --></A><H3>
+getPrecision</H3>
+<PRE>
+public double <B>getPrecision</B>(double&nbsp;tp,
+                           double&nbsp;fp)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<HR>
+<A NAME="getFScore(double, double)"><!-- --></A><H3>
+getFScore</H3>
+<PRE>
+public double <B>getFScore</B>(double&nbsp;recall,
+                        double&nbsp;precision)</PRE>
+<DL>
+<DD><DL>
+</DL>
+</DD>
+</DL>
+<!-- ========= END OF CLASS DATA ========= -->
+<HR>
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<A NAME="navbar_bottom"><!-- --></A>
+<A HREF="#skip-navbar_bottom" title="Skip navigation links"></A>
+<TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY="">
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+<TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1">
+<A NAME="navbar_bottom_firstrow"><!-- --></A>
+<TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">
+  <TR ALIGN="center" VALIGN="top">
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="class-use/AnnotationComparer.html"><FONT CLASS="NavBarFont1"><B>Use</B></FONT></A>&nbsp;</TD>
+  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>
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+<TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>
+</EM>
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+</TR>
+<TR>
+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+&nbsp;<A HREF="../../lingscope/algorithms/AbnerTokenizer.html" title="class in lingscope.algorithms"><B>PREV CLASS</B></A>&nbsp;
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+<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
+  <A HREF="../../index.html?lingscope/algorithms/AnnotationComparer.html" target="_top"><B>FRAMES</B></A>  &nbsp;
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