xcoll 0.4.0__py3-none-any.whl → 0.5.1__py3-none-any.whl

xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp

@@ -0,0 +1,524 @@
+/*
+  tests/test_numpy_dtypes.cpp -- Structured and compound NumPy dtypes
+
+  Copyright (c) 2016 Ivan Smirnov
+
+  All rights reserved. Use of this source code is governed by a
+  BSD-style license that can be found in the LICENSE file.
+*/
+
+#include "pybind11_tests.h"
+#include <pybind11/numpy.h>
+
+#ifdef __GNUC__
+#define PYBIND11_PACKED(cls) cls __attribute__((__packed__))
+#else
+#define PYBIND11_PACKED(cls) __pragma(pack(push, 1)) cls __pragma(pack(pop))
+#endif
+
+namespace py = pybind11;
+
+struct SimpleStruct {
+    bool bool_;
+    uint32_t uint_;
+    float float_;
+    long double ldbl_;
+};
+
+std::ostream& operator<<(std::ostream& os, const SimpleStruct& v) {
+    return os << "s:" << v.bool_ << "," << v.uint_ << "," << v.float_ << "," << v.ldbl_;
+}
+
+struct SimpleStructReordered {
+    bool bool_;
+    float float_;
+    uint32_t uint_;
+    long double ldbl_;
+};
+
+PYBIND11_PACKED(struct PackedStruct {
+    bool bool_;
+    uint32_t uint_;
+    float float_;
+    long double ldbl_;
+});
+
+std::ostream& operator<<(std::ostream& os, const PackedStruct& v) {
+    return os << "p:" << v.bool_ << "," << v.uint_ << "," << v.float_ << "," << v.ldbl_;
+}
+
+PYBIND11_PACKED(struct NestedStruct {
+    SimpleStruct a;
+    PackedStruct b;
+});
+
+std::ostream& operator<<(std::ostream& os, const NestedStruct& v) {
+    return os << "n:a=" << v.a << ";b=" << v.b;
+}
+
+struct PartialStruct {
+    bool bool_;
+    uint32_t uint_;
+    float float_;
+    uint64_t dummy2;
+    long double ldbl_;
+};
+
+struct PartialNestedStruct {
+    uint64_t dummy1;
+    PartialStruct a;
+    uint64_t dummy2;
+};
+
+struct UnboundStruct { };
+
+struct StringStruct {
+    char a[3];
+    std::array<char, 3> b;
+};
+
+struct ComplexStruct {
+    std::complex<float> cflt;
+    std::complex<double> cdbl;
+};
+
+std::ostream& operator<<(std::ostream& os, const ComplexStruct& v) {
+    return os << "c:" << v.cflt << "," << v.cdbl;
+}
+
+struct ArrayStruct {
+    char a[3][4];
+    int32_t b[2];
+    std::array<uint8_t, 3> c;
+    std::array<float, 2> d[4];
+};
+
+PYBIND11_PACKED(struct StructWithUglyNames {
+    int8_t __x__;
+    uint64_t __y__;
+});
+
+enum class E1 : int64_t { A = -1, B = 1 };
+enum E2 : uint8_t { X = 1, Y = 2 };
+
+PYBIND11_PACKED(struct EnumStruct {
+    E1 e1;
+    E2 e2;
+});
+
+std::ostream& operator<<(std::ostream& os, const StringStruct& v) {
+    os << "a='";
+    for (size_t i = 0; i < 3 && (v.a[i] != 0); i++)
+        os << v.a[i];
+    os << "',b='";
+    for (size_t i = 0; i < 3 && (v.b[i] != 0); i++)
+        os << v.b[i];
+    return os << "'";
+}
+
+std::ostream& operator<<(std::ostream& os, const ArrayStruct& v) {
+    os << "a={";
+    for (int i = 0; i < 3; i++) {
+        if (i > 0)
+            os << ',';
+        os << '{';
+        for (int j = 0; j < 3; j++)
+            os << v.a[i][j] << ',';
+        os << v.a[i][3] << '}';
+    }
+    os << "},b={" << v.b[0] << ',' << v.b[1];
+    os << "},c={" << int(v.c[0]) << ',' << int(v.c[1]) << ',' << int(v.c[2]);
+    os << "},d={";
+    for (int i = 0; i < 4; i++) {
+        if (i > 0)
+            os << ',';
+        os << '{' << v.d[i][0] << ',' << v.d[i][1] << '}';
+    }
+    return os << '}';
+}
+
+std::ostream& operator<<(std::ostream& os, const EnumStruct& v) {
+    return os << "e1=" << (v.e1 == E1::A ? "A" : "B") << ",e2=" << (v.e2 == E2::X ? "X" : "Y");
+}
+
+template <typename T>
+py::array mkarray_via_buffer(size_t n) {
+    return py::array(py::buffer_info(nullptr, sizeof(T),
+                                     py::format_descriptor<T>::format(),
+                                     1, { n }, { sizeof(T) }));
+}
+
+#define SET_TEST_VALS(s, i)                                                                       \
+    do {                                                                                          \
+        (s).bool_ = (i) % 2 != 0;                                                                 \
+        (s).uint_ = (uint32_t) (i);                                                               \
+        (s).float_ = (float) (i) *1.5f;                                                           \
+        (s).ldbl_ = (long double) (i) * -2.5L;                                                    \
+    } while (0)
+
+template <typename S>
+py::array_t<S, 0> create_recarray(size_t n) {
+    auto arr = mkarray_via_buffer<S>(n);
+    auto req = arr.request();
+    auto ptr = static_cast<S*>(req.ptr);
+    for (size_t i = 0; i < n; i++) {
+        SET_TEST_VALS(ptr[i], i);
+    }
+    return arr;
+}
+
+template <typename S>
+py::list print_recarray(py::array_t<S, 0> arr) {
+    const auto req = arr.request();
+    const auto ptr = static_cast<S*>(req.ptr);
+    auto l = py::list();
+    for (py::ssize_t i = 0; i < req.size; i++) {
+        std::stringstream ss;
+        ss << ptr[i];
+        l.append(py::str(ss.str()));
+    }
+    return l;
+}
+
+py::array_t<int32_t, 0> test_array_ctors(int i) {
+    using arr_t = py::array_t<int32_t, 0>;
+
+    std::vector<int32_t> data { 1, 2, 3, 4, 5, 6 };
+    std::vector<py::ssize_t> shape { 3, 2 };
+    std::vector<py::ssize_t> strides { 8, 4 };
+
+    auto ptr = data.data();
+    auto vptr = (void *) ptr;
+    auto dtype = py::dtype("int32");
+
+    py::buffer_info buf_ndim1(vptr, 4, "i", 6);
+    py::buffer_info buf_ndim1_null(nullptr, 4, "i", 6);
+    py::buffer_info buf_ndim2(vptr, 4, "i", 2, shape, strides);
+    py::buffer_info buf_ndim2_null(nullptr, 4, "i", 2, shape, strides);
+
+    auto fill = [](py::array arr) {
+        auto req = arr.request();
+        for (int i = 0; i < 6; i++) ((int32_t *) req.ptr)[i] = i + 1;
+        return arr;
+    };
+
+    switch (i) {
+    // shape: (3, 2)
+    case 10: return arr_t(shape, strides, ptr);
+    case 11: return py::array(shape, strides, ptr);
+    case 12: return py::array(dtype, shape, strides, vptr);
+    case 13: return arr_t(shape, ptr);
+    case 14: return py::array(shape, ptr);
+    case 15: return py::array(dtype, shape, vptr);
+    case 16: return arr_t(buf_ndim2);
+    case 17: return py::array(buf_ndim2);
+    // shape: (3, 2) - post-fill
+    case 20: return fill(arr_t(shape, strides));
+    case 21: return py::array(shape, strides, ptr); // can't have nullptr due to templated ctor
+    case 22: return fill(py::array(dtype, shape, strides));
+    case 23: return fill(arr_t(shape));
+    case 24: return py::array(shape, ptr); // can't have nullptr due to templated ctor
+    case 25: return fill(py::array(dtype, shape));
+    case 26: return fill(arr_t(buf_ndim2_null));
+    case 27: return fill(py::array(buf_ndim2_null));
+    // shape: (6, )
+    case 30: return arr_t(6, ptr);
+    case 31: return py::array(6, ptr);
+    case 32: return py::array(dtype, 6, vptr);
+    case 33: return arr_t(buf_ndim1);
+    case 34: return py::array(buf_ndim1);
+    // shape: (6, )
+    case 40: return fill(arr_t(6));
+    case 41: return py::array(6, ptr);  // can't have nullptr due to templated ctor
+    case 42: return fill(py::array(dtype, 6));
+    case 43: return fill(arr_t(buf_ndim1_null));
+    case 44: return fill(py::array(buf_ndim1_null));
+    }
+    return arr_t();
+}
+
+py::list test_dtype_ctors() {
+    py::list list;
+    list.append(py::dtype("int32"));
+    list.append(py::dtype(std::string("float64")));
+    list.append(py::dtype::from_args(py::str("bool")));
+    py::list names, offsets, formats;
+    py::dict dict;
+    names.append(py::str("a")); names.append(py::str("b")); dict["names"] = names;
+    offsets.append(py::int_(1)); offsets.append(py::int_(10)); dict["offsets"] = offsets;
+    formats.append(py::dtype("int32")); formats.append(py::dtype("float64")); dict["formats"] = formats;
+    dict["itemsize"] = py::int_(20);
+    list.append(py::dtype::from_args(dict));
+    list.append(py::dtype(names, formats, offsets, 20));
+    list.append(py::dtype(py::buffer_info((void *) 0, sizeof(unsigned int), "I", 1)));
+    list.append(py::dtype(py::buffer_info((void *) 0, 0, "T{i:a:f:b:}", 1)));
+    return list;
+}
+
+struct A {};
+struct B {};
+
+TEST_SUBMODULE(numpy_dtypes, m) {
+    try { py::module_::import("numpy"); }
+    catch (...) { return; }
+
+    // typeinfo may be registered before the dtype descriptor for scalar casts to work...
+    py::class_<SimpleStruct>(m, "SimpleStruct")
+        // Explicit construct to ensure zero-valued initialization.
+        .def(py::init([]() { return SimpleStruct(); }))
+        .def_readwrite("bool_", &SimpleStruct::bool_)
+        .def_readwrite("uint_", &SimpleStruct::uint_)
+        .def_readwrite("float_", &SimpleStruct::float_)
+        .def_readwrite("ldbl_", &SimpleStruct::ldbl_)
+        .def("astuple",
+             [](const SimpleStruct &self) {
+                 return py::make_tuple(self.bool_, self.uint_, self.float_, self.ldbl_);
+             })
+        .def_static("fromtuple", [](const py::tuple &tup) {
+            if (py::len(tup) != 4) {
+                throw py::cast_error("Invalid size");
+            }
+            return SimpleStruct{
+                tup[0].cast<bool>(),
+                tup[1].cast<uint32_t>(),
+                tup[2].cast<float>(),
+                tup[3].cast<long double>()};
+        });
+
+    PYBIND11_NUMPY_DTYPE(SimpleStruct, bool_, uint_, float_, ldbl_);
+    PYBIND11_NUMPY_DTYPE(SimpleStructReordered, bool_, uint_, float_, ldbl_);
+    PYBIND11_NUMPY_DTYPE(PackedStruct, bool_, uint_, float_, ldbl_);
+    PYBIND11_NUMPY_DTYPE(NestedStruct, a, b);
+    PYBIND11_NUMPY_DTYPE(PartialStruct, bool_, uint_, float_, ldbl_);
+    PYBIND11_NUMPY_DTYPE(PartialNestedStruct, a);
+    PYBIND11_NUMPY_DTYPE(StringStruct, a, b);
+    PYBIND11_NUMPY_DTYPE(ArrayStruct, a, b, c, d);
+    PYBIND11_NUMPY_DTYPE(EnumStruct, e1, e2);
+    PYBIND11_NUMPY_DTYPE(ComplexStruct, cflt, cdbl);
+
+    // ... or after
+    py::class_<PackedStruct>(m, "PackedStruct");
+
+    PYBIND11_NUMPY_DTYPE_EX(StructWithUglyNames, __x__, "x", __y__, "y");
+
+    // If uncommented, this should produce a static_assert failure telling the user that the struct
+    // is not a POD type
+//    struct NotPOD { std::string v; NotPOD() : v("hi") {}; };
+//    PYBIND11_NUMPY_DTYPE(NotPOD, v);
+
+    // Check that dtypes can be registered programmatically, both from
+    // initializer lists of field descriptors and from other containers.
+    py::detail::npy_format_descriptor<A>::register_dtype(
+        {}
+    );
+    py::detail::npy_format_descriptor<B>::register_dtype(
+        std::vector<py::detail::field_descriptor>{}
+    );
+
+    // test_recarray, test_scalar_conversion
+    m.def("create_rec_simple", &create_recarray<SimpleStruct>);
+    m.def("create_rec_packed", &create_recarray<PackedStruct>);
+    m.def("create_rec_nested", [](size_t n) { // test_signature
+        py::array_t<NestedStruct, 0> arr = mkarray_via_buffer<NestedStruct>(n);
+        auto req = arr.request();
+        auto ptr = static_cast<NestedStruct*>(req.ptr);
+        for (size_t i = 0; i < n; i++) {
+            SET_TEST_VALS(ptr[i].a, i);
+            SET_TEST_VALS(ptr[i].b, i + 1);
+        }
+        return arr;
+    });
+    m.def("create_rec_partial", &create_recarray<PartialStruct>);
+    m.def("create_rec_partial_nested", [](size_t n) {
+        py::array_t<PartialNestedStruct, 0> arr = mkarray_via_buffer<PartialNestedStruct>(n);
+        auto req = arr.request();
+        auto ptr = static_cast<PartialNestedStruct*>(req.ptr);
+        for (size_t i = 0; i < n; i++) {
+            SET_TEST_VALS(ptr[i].a, i);
+        }
+        return arr;
+    });
+    m.def("print_rec_simple", &print_recarray<SimpleStruct>);
+    m.def("print_rec_packed", &print_recarray<PackedStruct>);
+    m.def("print_rec_nested", &print_recarray<NestedStruct>);
+
+    // test_format_descriptors
+    m.def("get_format_unbound", []() { return py::format_descriptor<UnboundStruct>::format(); });
+    m.def("print_format_descriptors", []() {
+        py::list l;
+        for (const auto &fmt : {
+            py::format_descriptor<SimpleStruct>::format(),
+            py::format_descriptor<PackedStruct>::format(),
+            py::format_descriptor<NestedStruct>::format(),
+            py::format_descriptor<PartialStruct>::format(),
+            py::format_descriptor<PartialNestedStruct>::format(),
+            py::format_descriptor<StringStruct>::format(),
+            py::format_descriptor<ArrayStruct>::format(),
+            py::format_descriptor<EnumStruct>::format(),
+            py::format_descriptor<ComplexStruct>::format()
+        }) {
+            l.append(py::cast(fmt));
+        }
+        return l;
+    });
+
+    // test_dtype
+    std::vector<const char *> dtype_names{
+        "byte", "short", "intc", "int_", "longlong",
+        "ubyte", "ushort", "uintc", "uint", "ulonglong",
+        "half", "single", "double", "longdouble",
+        "csingle", "cdouble", "clongdouble",
+        "bool_", "datetime64", "timedelta64", "object_"
+    };
+
+    m.def("print_dtypes", []() {
+        py::list l;
+        for (const py::handle &d : {
+            py::dtype::of<SimpleStruct>(),
+            py::dtype::of<PackedStruct>(),
+            py::dtype::of<NestedStruct>(),
+            py::dtype::of<PartialStruct>(),
+            py::dtype::of<PartialNestedStruct>(),
+            py::dtype::of<StringStruct>(),
+            py::dtype::of<ArrayStruct>(),
+            py::dtype::of<EnumStruct>(),
+            py::dtype::of<StructWithUglyNames>(),
+            py::dtype::of<ComplexStruct>()
+        })
+            l.append(py::str(d));
+        return l;
+    });
+    m.def("test_dtype_ctors", &test_dtype_ctors);
+    m.def("test_dtype_kind", [dtype_names]() {
+        py::list list;
+        for (auto& dt_name : dtype_names)
+            list.append(py::dtype(dt_name).kind());
+        return list;
+    });
+    m.def("test_dtype_char_", [dtype_names]() {
+        py::list list;
+        for (auto& dt_name : dtype_names)
+            list.append(py::dtype(dt_name).char_());
+        return list;
+    });
+    m.def("test_dtype_methods", []() {
+        py::list list;
+        auto dt1 = py::dtype::of<int32_t>();
+        auto dt2 = py::dtype::of<SimpleStruct>();
+        list.append(dt1); list.append(dt2);
+        list.append(py::bool_(dt1.has_fields())); list.append(py::bool_(dt2.has_fields()));
+        list.append(py::int_(dt1.itemsize())); list.append(py::int_(dt2.itemsize()));
+        return list;
+    });
+    struct TrailingPaddingStruct {
+        int32_t a;
+        char b;
+    };
+    PYBIND11_NUMPY_DTYPE(TrailingPaddingStruct, a, b);
+    m.def("trailing_padding_dtype", []() { return py::dtype::of<TrailingPaddingStruct>(); });
+
+    // test_string_array
+    m.def("create_string_array", [](bool non_empty) {
+        py::array_t<StringStruct, 0> arr = mkarray_via_buffer<StringStruct>(non_empty ? 4 : 0);
+        if (non_empty) {
+            auto req = arr.request();
+            auto ptr = static_cast<StringStruct*>(req.ptr);
+            for (py::ssize_t i = 0; i < req.size * req.itemsize; i++)
+                static_cast<char*>(req.ptr)[i] = 0;
+            ptr[1].a[0] = 'a'; ptr[1].b[0] = 'a';
+            ptr[2].a[0] = 'a'; ptr[2].b[0] = 'a';
+            ptr[3].a[0] = 'a'; ptr[3].b[0] = 'a';
+
+            ptr[2].a[1] = 'b'; ptr[2].b[1] = 'b';
+            ptr[3].a[1] = 'b'; ptr[3].b[1] = 'b';
+
+            ptr[3].a[2] = 'c'; ptr[3].b[2] = 'c';
+        }
+        return arr;
+    });
+    m.def("print_string_array", &print_recarray<StringStruct>);
+
+    // test_array_array
+    m.def("create_array_array", [](size_t n) {
+        py::array_t<ArrayStruct, 0> arr = mkarray_via_buffer<ArrayStruct>(n);
+        auto ptr = (ArrayStruct *) arr.mutable_data();
+        for (size_t i = 0; i < n; i++) {
+            for (size_t j = 0; j < 3; j++)
+                for (size_t k = 0; k < 4; k++)
+                    ptr[i].a[j][k] = char('A' + (i * 100 + j * 10 + k) % 26);
+            for (size_t j = 0; j < 2; j++)
+                ptr[i].b[j] = int32_t(i * 1000 + j);
+            for (size_t j = 0; j < 3; j++)
+                ptr[i].c[j] = uint8_t(i * 10 + j);
+            for (size_t j = 0; j < 4; j++)
+                for (size_t k = 0; k < 2; k++)
+                    ptr[i].d[j][k] = float(i) * 100.0f + float(j) * 10.0f + float(k);
+        }
+        return arr;
+    });
+    m.def("print_array_array", &print_recarray<ArrayStruct>);
+
+    // test_enum_array
+    m.def("create_enum_array", [](size_t n) {
+        py::array_t<EnumStruct, 0> arr = mkarray_via_buffer<EnumStruct>(n);
+        auto ptr = (EnumStruct *) arr.mutable_data();
+        for (size_t i = 0; i < n; i++) {
+            ptr[i].e1 = static_cast<E1>(-1 + ((int) i % 2) * 2);
+            ptr[i].e2 = static_cast<E2>(1 + (i % 2));
+        }
+        return arr;
+    });
+    m.def("print_enum_array", &print_recarray<EnumStruct>);
+
+    // test_complex_array
+    m.def("create_complex_array", [](size_t n) {
+        py::array_t<ComplexStruct, 0> arr = mkarray_via_buffer<ComplexStruct>(n);
+        auto ptr = (ComplexStruct *) arr.mutable_data();
+        for (size_t i = 0; i < n; i++) {
+            ptr[i].cflt.real(float(i));
+            ptr[i].cflt.imag(float(i) + 0.25f);
+            ptr[i].cdbl.real(double(i) + 0.5);
+            ptr[i].cdbl.imag(double(i) + 0.75);
+        }
+        return arr;
+    });
+    m.def("print_complex_array", &print_recarray<ComplexStruct>);
+
+    // test_array_constructors
+    m.def("test_array_ctors", &test_array_ctors);
+
+    // test_compare_buffer_info
+    struct CompareStruct {
+        bool x;
+        uint32_t y;
+        float z;
+    };
+    PYBIND11_NUMPY_DTYPE(CompareStruct, x, y, z);
+    m.def("compare_buffer_info", []() {
+        py::list list;
+        list.append(py::bool_(py::detail::compare_buffer_info<float>::compare(py::buffer_info(nullptr, sizeof(float), "f", 1))));
+        list.append(py::bool_(py::detail::compare_buffer_info<unsigned>::compare(py::buffer_info(nullptr, sizeof(int), "I", 1))));
+        list.append(py::bool_(py::detail::compare_buffer_info<long>::compare(py::buffer_info(nullptr, sizeof(long), "l", 1))));
+        list.append(py::bool_(py::detail::compare_buffer_info<long>::compare(py::buffer_info(nullptr, sizeof(long), sizeof(long) == sizeof(int) ? "i" : "q", 1))));
+        list.append(py::bool_(py::detail::compare_buffer_info<CompareStruct>::compare(py::buffer_info(nullptr, sizeof(CompareStruct), "T{?:x:3xI:y:f:z:}", 1))));
+        return list;
+    });
+    m.def("buffer_to_dtype", [](py::buffer& buf) { return py::dtype(buf.request()); });
+
+    // test_scalar_conversion
+    auto f_simple = [](SimpleStruct s) { return s.uint_ * 10; };
+    m.def("f_simple", f_simple);
+    m.def("f_packed", [](PackedStruct s) { return s.uint_ * 10; });
+    m.def("f_nested", [](NestedStruct s) { return s.a.uint_ * 10; });
+
+    // test_vectorize
+    m.def("f_simple_vectorized", py::vectorize(f_simple));
+    auto f_simple_pass_thru = [](SimpleStruct s) { return s; };
+    m.def("f_simple_pass_thru_vectorized", py::vectorize(f_simple_pass_thru));
+
+    // test_register_dtype
+    m.def("register_dtype", []() { PYBIND11_NUMPY_DTYPE(SimpleStruct, bool_, uint_, float_, ldbl_); });
+
+    // test_str_leak
+    m.def("dtype_wrapper", [](py::object d) { return py::dtype::from_args(std::move(d)); });
+}