tooluniverse 1.0.6__py3-none-any.whl → 1.0.7__py3-none-any.whl

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  1. tooluniverse/__init__.py +31 -0
  2. tooluniverse/agentic_tool.py +40 -4
  3. tooluniverse/arxiv_tool.py +2 -6
  4. tooluniverse/base_tool.py +174 -25
  5. tooluniverse/biorxiv_tool.py +35 -16
  6. tooluniverse/cellosaurus_tool.py +1332 -0
  7. tooluniverse/compose_scripts/enhanced_multi_agent_literature_search.py +310 -0
  8. tooluniverse/compose_scripts/multi_agent_literature_search.py +794 -0
  9. tooluniverse/compose_scripts/tool_graph_generation.py +68 -35
  10. tooluniverse/compose_scripts/tool_metadata_generator.py +205 -105
  11. tooluniverse/compose_tool.py +93 -8
  12. tooluniverse/core_tool.py +46 -44
  13. tooluniverse/crossref_tool.py +89 -4
  14. tooluniverse/data/agentic_tools.json +1271 -1179
  15. tooluniverse/data/alphafold_tools.json +356 -105
  16. tooluniverse/data/arxiv_tools.json +88 -81
  17. tooluniverse/data/biorxiv_tools.json +69 -64
  18. tooluniverse/data/cellosaurus_tools.json +260 -0
  19. tooluniverse/data/chembl_tools.json +27 -12
  20. tooluniverse/data/clinicaltrials_gov_tools.json +377 -302
  21. tooluniverse/data/compose_tools.json +123 -16
  22. tooluniverse/data/core_tools.json +107 -99
  23. tooluniverse/data/crossref_tools.json +131 -63
  24. tooluniverse/data/dailymed_tools.json +17 -3
  25. tooluniverse/data/dataset_tools.json +1031 -588
  26. tooluniverse/data/dblp_tools.json +135 -64
  27. tooluniverse/data/disease_target_score_tools.json +20 -10
  28. tooluniverse/data/doaj_tools.json +133 -87
  29. tooluniverse/data/embedding_tools.json +362 -299
  30. tooluniverse/data/enrichr_tools.json +34 -27
  31. tooluniverse/data/europe_pmc_tools.json +108 -16
  32. tooluniverse/data/fatcat_tools.json +71 -66
  33. tooluniverse/data/fda_drug_adverse_event_tools.json +1061 -445
  34. tooluniverse/data/fda_drug_labeling_tools.json +6858 -6901
  35. tooluniverse/data/finder_tools.json +32 -37
  36. tooluniverse/data/gene_ontology_tools.json +19 -7
  37. tooluniverse/data/gwas_tools.json +1720 -959
  38. tooluniverse/data/hal_tools.json +69 -64
  39. tooluniverse/data/hpa_tools.json +53 -14
  40. tooluniverse/data/humanbase_tools.json +51 -43
  41. tooluniverse/data/idmap_tools.json +76 -70
  42. tooluniverse/data/literature_search_tools.json +306 -0
  43. tooluniverse/data/mcp_client_tools_example.json +122 -107
  44. tooluniverse/data/medlineplus_tools.json +50 -10
  45. tooluniverse/data/medrxiv_tools.json +69 -64
  46. tooluniverse/data/molecule_2d_tools.json +134 -0
  47. tooluniverse/data/molecule_3d_tools.json +164 -0
  48. tooluniverse/data/monarch_tools.json +112 -110
  49. tooluniverse/data/odphp_tools.json +389 -119
  50. tooluniverse/data/openaire_tools.json +89 -79
  51. tooluniverse/data/openalex_tools.json +100 -31
  52. tooluniverse/data/opentarget_tools.json +1457 -1372
  53. tooluniverse/data/osf_preprints_tools.json +77 -73
  54. tooluniverse/data/packages/bioinformatics_core_tools.json +40 -10
  55. tooluniverse/data/packages/cheminformatics_tools.json +20 -5
  56. tooluniverse/data/packages/genomics_tools.json +36 -9
  57. tooluniverse/data/packages/machine_learning_tools.json +36 -9
  58. tooluniverse/data/packages/scientific_computing_tools.json +20 -5
  59. tooluniverse/data/packages/single_cell_tools.json +20 -5
  60. tooluniverse/data/packages/structural_biology_tools.json +16 -4
  61. tooluniverse/data/packages/visualization_tools.json +20 -5
  62. tooluniverse/data/pmc_tools.json +111 -103
  63. tooluniverse/data/protein_structure_3d_tools.json +138 -0
  64. tooluniverse/data/pubchem_tools.json +37 -12
  65. tooluniverse/data/pubmed_tools.json +126 -58
  66. tooluniverse/data/pubtator_tools.json +68 -60
  67. tooluniverse/data/rcsb_pdb_tools.json +1532 -1221
  68. tooluniverse/data/semantic_scholar_tools.json +55 -22
  69. tooluniverse/data/special_tools.json +8 -6
  70. tooluniverse/data/tool_composition_tools.json +112 -82
  71. tooluniverse/data/unified_guideline_tools.json +707 -0
  72. tooluniverse/data/url_fetch_tools.json +102 -82
  73. tooluniverse/data/uspto_tools.json +49 -30
  74. tooluniverse/data/wikidata_sparql_tools.json +42 -39
  75. tooluniverse/data/xml_tools.json +3274 -3113
  76. tooluniverse/data/zenodo_tools.json +84 -76
  77. tooluniverse/dblp_tool.py +76 -6
  78. tooluniverse/default_config.py +13 -0
  79. tooluniverse/doaj_tool.py +76 -17
  80. tooluniverse/doctor.py +48 -0
  81. tooluniverse/europe_pmc_tool.py +132 -17
  82. tooluniverse/exceptions.py +170 -0
  83. tooluniverse/execute_function.py +784 -362
  84. tooluniverse/fatcat_tool.py +0 -1
  85. tooluniverse/generate_tools.py +198 -0
  86. tooluniverse/hal_tool.py +1 -1
  87. tooluniverse/llm_clients.py +101 -124
  88. tooluniverse/mcp_tool_registry.py +4 -1
  89. tooluniverse/medrxiv_tool.py +32 -13
  90. tooluniverse/memory_manager.py +166 -0
  91. tooluniverse/molecule_2d_tool.py +274 -0
  92. tooluniverse/molecule_3d_tool.py +441 -0
  93. tooluniverse/odphp_tool.py +49 -14
  94. tooluniverse/openaire_tool.py +5 -20
  95. tooluniverse/openalex_tool.py +34 -0
  96. tooluniverse/osf_preprints_tool.py +1 -1
  97. tooluniverse/pmc_tool.py +54 -56
  98. tooluniverse/protein_structure_3d_tool.py +295 -0
  99. tooluniverse/pubmed_tool.py +69 -6
  100. tooluniverse/remote/boltz/boltz_mcp_server.py +3 -1
  101. tooluniverse/remote/uspto_downloader/uspto_downloader_mcp_server.py +3 -1
  102. tooluniverse/semantic_scholar_tool.py +40 -10
  103. tooluniverse/smcp.py +140 -205
  104. tooluniverse/smcp_server.py +97 -55
  105. tooluniverse/tool_registry.py +35 -3
  106. tooluniverse/tools/ADMETAI_predict_BBB_penetrance.py +46 -0
  107. tooluniverse/tools/ADMETAI_predict_CYP_interactions.py +46 -0
  108. tooluniverse/tools/ADMETAI_predict_bioavailability.py +46 -0
  109. tooluniverse/tools/ADMETAI_predict_clearance_distribution.py +49 -0
  110. tooluniverse/tools/ADMETAI_predict_nuclear_receptor_activity.py +49 -0
  111. tooluniverse/tools/ADMETAI_predict_physicochemical_properties.py +49 -0
  112. tooluniverse/tools/ADMETAI_predict_solubility_lipophilicity_hydration.py +49 -0
  113. tooluniverse/tools/ADMETAI_predict_stress_response.py +46 -0
  114. tooluniverse/tools/ADMETAI_predict_toxicity.py +46 -0
  115. tooluniverse/tools/AdvancedCodeQualityAnalyzer.py +63 -0
  116. tooluniverse/tools/AdverseEventICDMapper.py +46 -0
  117. tooluniverse/tools/AdverseEventPredictionQuestionGenerator.py +52 -0
  118. tooluniverse/tools/AdverseEventPredictionQuestionGeneratorWithContext.py +59 -0
  119. tooluniverse/tools/ArXiv_search_papers.py +63 -0
  120. tooluniverse/tools/ArgumentDescriptionOptimizer.py +55 -0
  121. tooluniverse/tools/BioRxiv_search_preprints.py +52 -0
  122. tooluniverse/tools/BiomarkerDiscoveryWorkflow.py +55 -0
  123. tooluniverse/tools/CORE_search_papers.py +67 -0
  124. tooluniverse/tools/CallAgent.py +46 -0
  125. tooluniverse/tools/ChEMBL_search_similar_molecules.py +59 -0
  126. tooluniverse/tools/CodeOptimizer.py +55 -0
  127. tooluniverse/tools/CodeQualityAnalyzer.py +71 -0
  128. tooluniverse/tools/ComprehensiveDrugDiscoveryPipeline.py +49 -0
  129. tooluniverse/tools/Crossref_search_works.py +55 -0
  130. tooluniverse/tools/DBLP_search_publications.py +52 -0
  131. tooluniverse/tools/DOAJ_search_articles.py +55 -0
  132. tooluniverse/tools/DailyMed_get_spl_by_setid.py +52 -0
  133. tooluniverse/tools/DailyMed_search_spls.py +79 -0
  134. tooluniverse/tools/DataAnalysisValidityReviewer.py +49 -0
  135. tooluniverse/tools/DescriptionAnalyzer.py +55 -0
  136. tooluniverse/tools/DescriptionQualityEvaluator.py +59 -0
  137. tooluniverse/tools/DomainExpertValidator.py +63 -0
  138. tooluniverse/tools/DrugSafetyAnalyzer.py +59 -0
  139. tooluniverse/tools/EthicalComplianceReviewer.py +49 -0
  140. tooluniverse/tools/EuropePMC_Guidelines_Search.py +52 -0
  141. tooluniverse/tools/EuropePMC_search_articles.py +52 -0
  142. tooluniverse/tools/ExperimentalDesignScorer.py +55 -0
  143. tooluniverse/tools/FAERS_count_additive_administration_routes.py +52 -0
  144. tooluniverse/tools/FAERS_count_additive_adverse_reactions.py +71 -0
  145. tooluniverse/tools/FAERS_count_additive_event_reports_by_country.py +63 -0
  146. tooluniverse/tools/FAERS_count_additive_reaction_outcomes.py +63 -0
  147. tooluniverse/tools/FAERS_count_additive_reports_by_reporter_country.py +63 -0
  148. tooluniverse/tools/FAERS_count_additive_seriousness_classification.py +63 -0
  149. tooluniverse/tools/FAERS_count_country_by_drug_event.py +63 -0
  150. tooluniverse/tools/FAERS_count_death_related_by_drug.py +49 -0
  151. tooluniverse/tools/FAERS_count_drug_routes_by_event.py +52 -0
  152. tooluniverse/tools/FAERS_count_drugs_by_drug_event.py +63 -0
  153. tooluniverse/tools/FAERS_count_outcomes_by_drug_event.py +63 -0
  154. tooluniverse/tools/FAERS_count_patient_age_distribution.py +49 -0
  155. tooluniverse/tools/FAERS_count_reactions_by_drug_event.py +71 -0
  156. tooluniverse/tools/FAERS_count_reportercountry_by_drug_event.py +63 -0
  157. tooluniverse/tools/FAERS_count_seriousness_by_drug_event.py +63 -0
  158. tooluniverse/tools/FDA_get_abuse_dependence_info_by_drug_name.py +55 -0
  159. tooluniverse/tools/FDA_get_abuse_info_by_drug_name.py +55 -0
  160. tooluniverse/tools/FDA_get_accessories_info_by_drug_name.py +55 -0
  161. tooluniverse/tools/FDA_get_active_ingredient_info_by_drug_name.py +55 -0
  162. tooluniverse/tools/FDA_get_adverse_reactions_by_drug_name.py +55 -0
  163. tooluniverse/tools/FDA_get_alarms_by_drug_name.py +55 -0
  164. tooluniverse/tools/FDA_get_animal_pharmacology_info_by_drug_name.py +55 -0
  165. tooluniverse/tools/FDA_get_assembly_installation_info_by_drug_name.py +55 -0
  166. tooluniverse/tools/FDA_get_boxed_warning_info_by_drug_name.py +55 -0
  167. tooluniverse/tools/FDA_get_brand_name_generic_name.py +52 -0
  168. tooluniverse/tools/FDA_get_calibration_instructions_by_drug_name.py +55 -0
  169. tooluniverse/tools/FDA_get_carcinogenic_mutagenic_fertility_by_drug_name.py +55 -0
  170. tooluniverse/tools/FDA_get_child_safety_info_by_drug_name.py +55 -0
  171. tooluniverse/tools/FDA_get_clinical_pharmacology_by_drug_name.py +55 -0
  172. tooluniverse/tools/FDA_get_clinical_studies_info_by_drug_name.py +55 -0
  173. tooluniverse/tools/FDA_get_contact_for_questions_info_by_drug_name.py +55 -0
  174. tooluniverse/tools/FDA_get_contraindications_by_drug_name.py +55 -0
  175. tooluniverse/tools/FDA_get_controlled_substance_DEA_schedule_info_by_drug_name.py +55 -0
  176. tooluniverse/tools/FDA_get_dear_health_care_provider_letter_info_by_drug_name.py +55 -0
  177. tooluniverse/tools/FDA_get_dependence_info_by_drug_name.py +55 -0
  178. tooluniverse/tools/FDA_get_disposal_info_by_drug_name.py +55 -0
  179. tooluniverse/tools/FDA_get_do_not_use_info_by_drug_name.py +55 -0
  180. tooluniverse/tools/FDA_get_document_id_by_drug_name.py +55 -0
  181. tooluniverse/tools/FDA_get_dosage_and_storage_information_by_drug_name.py +55 -0
  182. tooluniverse/tools/FDA_get_dosage_forms_and_strengths_by_drug_name.py +55 -0
  183. tooluniverse/tools/FDA_get_drug_generic_name.py +46 -0
  184. tooluniverse/tools/FDA_get_drug_interactions_by_drug_name.py +55 -0
  185. tooluniverse/tools/FDA_get_drug_name_by_SPL_ID.py +55 -0
  186. tooluniverse/tools/FDA_get_drug_name_by_adverse_reaction.py +59 -0
  187. tooluniverse/tools/FDA_get_drug_name_by_calibration_instructions.py +59 -0
  188. tooluniverse/tools/FDA_get_drug_name_by_dependence_info.py +59 -0
  189. tooluniverse/tools/FDA_get_drug_name_by_document_id.py +55 -0
  190. tooluniverse/tools/FDA_get_drug_name_by_dosage_info.py +55 -0
  191. tooluniverse/tools/FDA_get_drug_name_by_environmental_warning.py +59 -0
  192. tooluniverse/tools/FDA_get_drug_name_by_inactive_ingredient.py +59 -0
  193. tooluniverse/tools/FDA_get_drug_name_by_info_on_conditions_for_doctor_consultation.py +55 -0
  194. tooluniverse/tools/FDA_get_drug_name_by_labor_and_delivery_info.py +59 -0
  195. tooluniverse/tools/FDA_get_drug_name_by_microbiology.py +59 -0
  196. tooluniverse/tools/FDA_get_drug_name_by_other_safety_info.py +55 -0
  197. tooluniverse/tools/FDA_get_drug_name_by_pharmacodynamics.py +59 -0
  198. tooluniverse/tools/FDA_get_drug_name_by_pharmacogenomics.py +59 -0
  199. tooluniverse/tools/FDA_get_drug_name_by_precautions.py +55 -0
  200. tooluniverse/tools/FDA_get_drug_name_by_pregnancy_or_breastfeeding_info.py +59 -0
  201. tooluniverse/tools/FDA_get_drug_name_by_principal_display_panel.py +59 -0
  202. tooluniverse/tools/FDA_get_drug_name_by_reference.py +55 -0
  203. tooluniverse/tools/FDA_get_drug_name_by_set_id.py +55 -0
  204. tooluniverse/tools/FDA_get_drug_name_by_stop_use_info.py +55 -0
  205. tooluniverse/tools/FDA_get_drug_name_by_storage_and_handling_info.py +55 -0
  206. tooluniverse/tools/FDA_get_drug_name_by_warnings.py +55 -0
  207. tooluniverse/tools/FDA_get_drug_name_from_patient_package_insert.py +59 -0
  208. tooluniverse/tools/FDA_get_drug_names_by_abuse_dependence_info.py +55 -0
  209. tooluniverse/tools/FDA_get_drug_names_by_abuse_info.py +63 -0
  210. tooluniverse/tools/FDA_get_drug_names_by_accessories.py +63 -0
  211. tooluniverse/tools/FDA_get_drug_names_by_active_ingredient.py +63 -0
  212. tooluniverse/tools/FDA_get_drug_names_by_alarm.py +63 -0
  213. tooluniverse/tools/FDA_get_drug_names_by_animal_pharmacology_info.py +63 -0
  214. tooluniverse/tools/FDA_get_drug_names_by_application_number_NDC_number.py +59 -0
  215. tooluniverse/tools/FDA_get_drug_names_by_assembly_installation_info.py +63 -0
  216. tooluniverse/tools/FDA_get_drug_names_by_boxed_warning.py +63 -0
  217. tooluniverse/tools/FDA_get_drug_names_by_child_safety_info.py +63 -0
  218. tooluniverse/tools/FDA_get_drug_names_by_clinical_pharmacology.py +63 -0
  219. tooluniverse/tools/FDA_get_drug_names_by_clinical_studies.py +63 -0
  220. tooluniverse/tools/FDA_get_drug_names_by_consulting_doctor_pharmacist_info.py +63 -0
  221. tooluniverse/tools/FDA_get_drug_names_by_contraindications.py +63 -0
  222. tooluniverse/tools/FDA_get_drug_names_by_controlled_substance_DEA_schedule.py +63 -0
  223. tooluniverse/tools/FDA_get_drug_names_by_dear_health_care_provider_letter_info.py +63 -0
  224. tooluniverse/tools/FDA_get_drug_names_by_disposal_info.py +63 -0
  225. tooluniverse/tools/FDA_get_drug_names_by_dosage_forms_and_strengths_info.py +63 -0
  226. tooluniverse/tools/FDA_get_drug_names_by_drug_interactions.py +63 -0
  227. tooluniverse/tools/FDA_get_drug_names_by_effective_time.py +63 -0
  228. tooluniverse/tools/FDA_get_drug_names_by_food_safety_warnings.py +63 -0
  229. tooluniverse/tools/FDA_get_drug_names_by_general_precautions.py +63 -0
  230. tooluniverse/tools/FDA_get_drug_names_by_geriatric_use.py +63 -0
  231. tooluniverse/tools/FDA_get_drug_names_by_health_claim.py +63 -0
  232. tooluniverse/tools/FDA_get_drug_names_by_indication.py +55 -0
  233. tooluniverse/tools/FDA_get_drug_names_by_info_for_nursing_mothers.py +63 -0
  234. tooluniverse/tools/FDA_get_drug_names_by_information_for_owners_or_caregivers.py +63 -0
  235. tooluniverse/tools/FDA_get_drug_names_by_ingredient.py +63 -0
  236. tooluniverse/tools/FDA_get_drug_names_by_instructions_for_use.py +63 -0
  237. tooluniverse/tools/FDA_get_drug_names_by_lab_test_interference.py +63 -0
  238. tooluniverse/tools/FDA_get_drug_names_by_lab_tests.py +63 -0
  239. tooluniverse/tools/FDA_get_drug_names_by_mechanism_of_action.py +63 -0
  240. tooluniverse/tools/FDA_get_drug_names_by_medication_guide.py +63 -0
  241. tooluniverse/tools/FDA_get_drug_names_by_nonclinical_toxicology_info.py +63 -0
  242. tooluniverse/tools/FDA_get_drug_names_by_nonteratogenic_effects.py +63 -0
  243. tooluniverse/tools/FDA_get_drug_names_by_overdosage_info.py +63 -0
  244. tooluniverse/tools/FDA_get_drug_names_by_pediatric_use.py +63 -0
  245. tooluniverse/tools/FDA_get_drug_names_by_pharmacokinetics.py +63 -0
  246. tooluniverse/tools/FDA_get_drug_names_by_population_use.py +63 -0
  247. tooluniverse/tools/FDA_get_drug_names_by_pregnancy_effects_info.py +63 -0
  248. tooluniverse/tools/FDA_get_drug_names_by_residue_warning.py +63 -0
  249. tooluniverse/tools/FDA_get_drug_names_by_risk.py +63 -0
  250. tooluniverse/tools/FDA_get_drug_names_by_route.py +63 -0
  251. tooluniverse/tools/FDA_get_drug_names_by_safe_handling_warning.py +63 -0
  252. tooluniverse/tools/FDA_get_drug_names_by_safety_summary.py +63 -0
  253. tooluniverse/tools/FDA_get_drug_names_by_spl_indexing_data_elements.py +63 -0
  254. tooluniverse/tools/FDA_get_drug_names_by_teratogenic_effects.py +63 -0
  255. tooluniverse/tools/FDA_get_drug_names_by_user_safety_warning.py +63 -0
  256. tooluniverse/tools/FDA_get_drug_names_by_warnings_and_cautions.py +63 -0
  257. tooluniverse/tools/FDA_get_drugs_by_carcinogenic_mutagenic_fertility.py +63 -0
  258. tooluniverse/tools/FDA_get_effective_time_by_drug_name.py +55 -0
  259. tooluniverse/tools/FDA_get_environmental_warning_by_drug_name.py +55 -0
  260. tooluniverse/tools/FDA_get_general_precautions_by_drug_name.py +55 -0
  261. tooluniverse/tools/FDA_get_geriatric_use_info_by_drug_name.py +55 -0
  262. tooluniverse/tools/FDA_get_health_claims_by_drug_name.py +55 -0
  263. tooluniverse/tools/FDA_get_inactive_ingredient_info_by_drug_name.py +55 -0
  264. tooluniverse/tools/FDA_get_indications_by_drug_name.py +55 -0
  265. tooluniverse/tools/FDA_get_info_for_nursing_mothers_by_drug_name.py +55 -0
  266. tooluniverse/tools/FDA_get_info_for_patients_by_drug_name.py +55 -0
  267. tooluniverse/tools/FDA_get_info_on_conditions_for_doctor_consultation_by_drug_name.py +55 -0
  268. tooluniverse/tools/FDA_get_info_on_consulting_doctor_pharmacist_by_drug_name.py +55 -0
  269. tooluniverse/tools/FDA_get_information_for_owners_or_caregivers_by_drug_name.py +55 -0
  270. tooluniverse/tools/FDA_get_ingredients_by_drug_name.py +55 -0
  271. tooluniverse/tools/FDA_get_instructions_for_use_by_drug_name.py +55 -0
  272. tooluniverse/tools/FDA_get_lab_test_interference_info_by_drug_name.py +55 -0
  273. tooluniverse/tools/FDA_get_lab_tests_by_drug_name.py +55 -0
  274. tooluniverse/tools/FDA_get_labor_and_delivery_info_by_drug_name.py +55 -0
  275. tooluniverse/tools/FDA_get_manufacturer_name_NDC_number_by_drug_name.py +55 -0
  276. tooluniverse/tools/FDA_get_mechanism_of_action_by_drug_name.py +55 -0
  277. tooluniverse/tools/FDA_get_medication_guide_info_by_drug_name.py +55 -0
  278. tooluniverse/tools/FDA_get_microbiology_info_by_drug_name.py +55 -0
  279. tooluniverse/tools/FDA_get_nonclinical_toxicology_info_by_drug_name.py +55 -0
  280. tooluniverse/tools/FDA_get_nonteratogenic_effects_by_drug_name.py +55 -0
  281. tooluniverse/tools/FDA_get_other_safety_info_by_drug_name.py +55 -0
  282. tooluniverse/tools/FDA_get_overdosage_info_by_drug_name.py +55 -0
  283. tooluniverse/tools/FDA_get_patient_package_insert_from_drug_name.py +55 -0
  284. tooluniverse/tools/FDA_get_pediatric_use_info_by_drug_name.py +55 -0
  285. tooluniverse/tools/FDA_get_pharmacodynamics_by_drug_name.py +55 -0
  286. tooluniverse/tools/FDA_get_pharmacogenomics_info_by_drug_name.py +55 -0
  287. tooluniverse/tools/FDA_get_pharmacokinetics_by_drug_name.py +55 -0
  288. tooluniverse/tools/FDA_get_population_use_info_by_drug_name.py +55 -0
  289. tooluniverse/tools/FDA_get_precautions_by_drug_name.py +55 -0
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  574. tooluniverse/tools/get_diffdock_info.py +46 -0
  575. tooluniverse/tools/get_dscribe_info.py +49 -0
  576. tooluniverse/tools/get_ec_number_by_entity_id.py +46 -0
  577. tooluniverse/tools/get_elephant_info.py +44 -0
  578. tooluniverse/tools/get_em_3d_fitting_and_reconstruction_details.py +49 -0
  579. tooluniverse/tools/get_emdb_ids_by_pdb_id.py +46 -0
  580. tooluniverse/tools/get_episcanpy_info.py +44 -0
  581. tooluniverse/tools/get_ete3_info.py +44 -0
  582. tooluniverse/tools/get_faiss_info.py +46 -0
  583. tooluniverse/tools/get_fanc_info.py +46 -0
  584. tooluniverse/tools/get_flask_info.py +46 -0
  585. tooluniverse/tools/get_flowio_info.py +46 -0
  586. tooluniverse/tools/get_flowkit_info.py +46 -0
  587. tooluniverse/tools/get_flowutils_info.py +46 -0
  588. tooluniverse/tools/get_freesasa_info.py +44 -0
  589. tooluniverse/tools/get_galpy_info.py +44 -0
  590. tooluniverse/tools/get_gene_name_by_entity_id.py +46 -0
  591. tooluniverse/tools/get_geopandas_info.py +44 -0
  592. tooluniverse/tools/get_gget_info.py +46 -0
  593. tooluniverse/tools/get_googlesearch_python_info.py +46 -0
  594. tooluniverse/tools/get_gseapy_info.py +49 -0
  595. tooluniverse/tools/get_h5py_info.py +46 -0
  596. tooluniverse/tools/get_harmony_pytorch_info.py +46 -0
  597. tooluniverse/tools/get_hmmlearn_info.py +46 -0
  598. tooluniverse/tools/get_holoviews_info.py +44 -0
  599. tooluniverse/tools/get_host_organism_by_pdb_id.py +46 -0
  600. tooluniverse/tools/get_htmd_info.py +44 -0
  601. tooluniverse/tools/get_hyperopt_info.py +49 -0
  602. tooluniverse/tools/get_igraph_info.py +49 -0
  603. tooluniverse/tools/get_imageio_info.py +44 -0
  604. tooluniverse/tools/get_imbalanced_learn_info.py +44 -0
  605. tooluniverse/tools/get_jcvi_info.py +46 -0
  606. tooluniverse/tools/get_joblib_info.py +44 -0
  607. tooluniverse/tools/get_joint_associated_diseases_by_HPO_ID_list.py +55 -0
  608. tooluniverse/tools/get_khmer_info.py +46 -0
  609. tooluniverse/tools/get_kipoiseq_info.py +44 -0
  610. tooluniverse/tools/get_lifelines_info.py +49 -0
  611. tooluniverse/tools/get_ligand_bond_count_by_pdb_id.py +46 -0
  612. tooluniverse/tools/get_ligand_smiles_by_chem_comp_id.py +49 -0
  613. tooluniverse/tools/get_lightgbm_info.py +44 -0
  614. tooluniverse/tools/get_loompy_info.py +46 -0
  615. tooluniverse/tools/get_mageck_info.py +46 -0
  616. tooluniverse/tools/get_matplotlib_info.py +49 -0
  617. tooluniverse/tools/get_mdanalysis_info.py +46 -0
  618. tooluniverse/tools/get_mdtraj_info.py +44 -0
  619. tooluniverse/tools/get_mne_info.py +44 -0
  620. tooluniverse/tools/get_molfeat_info.py +44 -0
  621. tooluniverse/tools/get_molvs_info.py +44 -0
  622. tooluniverse/tools/get_mordred_info.py +44 -0
  623. tooluniverse/tools/get_msprime_info.py +49 -0
  624. tooluniverse/tools/get_mudata_info.py +49 -0
  625. tooluniverse/tools/get_mutation_annotations_by_pdb_id.py +46 -0
  626. tooluniverse/tools/get_neo_info.py +44 -0
  627. tooluniverse/tools/get_netcdf4_info.py +44 -0
  628. tooluniverse/tools/get_networkx_info.py +46 -0
  629. tooluniverse/tools/get_nglview_info.py +44 -0
  630. tooluniverse/tools/get_nilearn_info.py +44 -0
  631. tooluniverse/tools/get_numba_info.py +46 -0
  632. tooluniverse/tools/get_numpy_info.py +46 -0
  633. tooluniverse/tools/get_oligosaccharide_descriptors_by_entity_id.py +49 -0
  634. tooluniverse/tools/get_openbabel_info.py +49 -0
  635. tooluniverse/tools/get_openchem_info.py +46 -0
  636. tooluniverse/tools/get_opencv_info.py +49 -0
  637. tooluniverse/tools/get_openmm_info.py +49 -0
  638. tooluniverse/tools/get_optlang_info.py +46 -0
  639. tooluniverse/tools/get_optuna_info.py +44 -0
  640. tooluniverse/tools/get_palantir_info.py +44 -0
  641. tooluniverse/tools/get_pandas_info.py +49 -0
  642. tooluniverse/tools/get_patsy_info.py +44 -0
  643. tooluniverse/tools/get_pdbfixer_info.py +46 -0
  644. tooluniverse/tools/get_phenotype_by_HPO_ID.py +46 -0
  645. tooluniverse/tools/get_pillow_info.py +44 -0
  646. tooluniverse/tools/get_plantcv_info.py +46 -0
  647. tooluniverse/tools/get_plip_info.py +46 -0
  648. tooluniverse/tools/get_plotly_info.py +44 -0
  649. tooluniverse/tools/get_poliastro_info.py +46 -0
  650. tooluniverse/tools/get_polymer_entity_annotations.py +49 -0
  651. tooluniverse/tools/get_polymer_entity_count_by_pdb_id.py +46 -0
  652. tooluniverse/tools/get_polymer_entity_ids_by_pdb_id.py +46 -0
  653. tooluniverse/tools/get_polymer_entity_type_by_entity_id.py +49 -0
  654. tooluniverse/tools/get_polymer_molecular_weight_by_entity_id.py +49 -0
  655. tooluniverse/tools/get_poretools_info.py +44 -0
  656. tooluniverse/tools/get_prody_info.py +46 -0
  657. tooluniverse/tools/get_protein_classification_by_pdb_id.py +49 -0
  658. tooluniverse/tools/get_protein_metadata_by_pdb_id.py +46 -0
  659. tooluniverse/tools/get_pubchempy_info.py +44 -0
  660. tooluniverse/tools/get_pybedtools_info.py +49 -0
  661. tooluniverse/tools/get_pybigwig_info.py +46 -0
  662. tooluniverse/tools/get_pydeseq2_info.py +46 -0
  663. tooluniverse/tools/get_pyensembl_info.py +44 -0
  664. tooluniverse/tools/get_pyephem_info.py +44 -0
  665. tooluniverse/tools/get_pyfaidx_info.py +49 -0
  666. tooluniverse/tools/get_pyfasta_info.py +44 -0
  667. tooluniverse/tools/get_pykalman_info.py +46 -0
  668. tooluniverse/tools/get_pyliftover_info.py +49 -0
  669. tooluniverse/tools/get_pymassspec_info.py +46 -0
  670. tooluniverse/tools/get_pymed_info.py +46 -0
  671. tooluniverse/tools/get_pymzml_info.py +46 -0
  672. tooluniverse/tools/get_pypdf2_info.py +46 -0
  673. tooluniverse/tools/get_pyranges_info.py +49 -0
  674. tooluniverse/tools/get_pyrosetta_info.py +44 -0
  675. tooluniverse/tools/get_pysam_info.py +46 -0
  676. tooluniverse/tools/get_pyscenic_info.py +46 -0
  677. tooluniverse/tools/get_pyscf_info.py +46 -0
  678. tooluniverse/tools/get_pyscreener_info.py +46 -0
  679. tooluniverse/tools/get_pytdc_info.py +46 -0
  680. tooluniverse/tools/get_python_libsbml_info.py +46 -0
  681. tooluniverse/tools/get_pytorch_info.py +49 -0
  682. tooluniverse/tools/get_pyvcf_info.py +44 -0
  683. tooluniverse/tools/get_pyvis_info.py +44 -0
  684. tooluniverse/tools/get_qutip_info.py +44 -0
  685. tooluniverse/tools/get_rasterio_info.py +44 -0
  686. tooluniverse/tools/get_rdkit_info.py +46 -0
  687. tooluniverse/tools/get_refinement_resolution_by_pdb_id.py +49 -0
  688. tooluniverse/tools/get_release_deposit_dates_by_pdb_id.py +49 -0
  689. tooluniverse/tools/get_reportlab_info.py +49 -0
  690. tooluniverse/tools/get_requests_info.py +49 -0
  691. tooluniverse/tools/get_ruptures_info.py +46 -0
  692. tooluniverse/tools/get_scanorama_info.py +44 -0
  693. tooluniverse/tools/get_scanpy_info.py +49 -0
  694. tooluniverse/tools/get_schnetpack_info.py +49 -0
  695. tooluniverse/tools/get_scholarly_info.py +46 -0
  696. tooluniverse/tools/get_scikit_bio_info.py +49 -0
  697. tooluniverse/tools/get_scikit_image_info.py +46 -0
  698. tooluniverse/tools/get_scikit_learn_info.py +49 -0
  699. tooluniverse/tools/get_scipy_info.py +46 -0
  700. tooluniverse/tools/get_scrublet_info.py +49 -0
  701. tooluniverse/tools/get_scvelo_info.py +49 -0
  702. tooluniverse/tools/get_scvi_tools_info.py +44 -0
  703. tooluniverse/tools/get_seaborn_info.py +49 -0
  704. tooluniverse/tools/get_sequence_by_pdb_id.py +46 -0
  705. tooluniverse/tools/get_sequence_lengths_by_pdb_id.py +46 -0
  706. tooluniverse/tools/get_sequence_positional_features_by_instance_id.py +49 -0
  707. tooluniverse/tools/get_skopt_info.py +44 -0
  708. tooluniverse/tools/get_souporcell_info.py +46 -0
  709. tooluniverse/tools/get_source_organism_by_pdb_id.py +46 -0
  710. tooluniverse/tools/get_space_group_by_pdb_id.py +46 -0
  711. tooluniverse/tools/get_statsmodels_info.py +49 -0
  712. tooluniverse/tools/get_structure_determination_software_by_pdb_id.py +49 -0
  713. tooluniverse/tools/get_structure_title_by_pdb_id.py +46 -0
  714. tooluniverse/tools/get_structure_validation_metrics_by_pdb_id.py +49 -0
  715. tooluniverse/tools/get_sunpy_info.py +44 -0
  716. tooluniverse/tools/get_sympy_info.py +46 -0
  717. tooluniverse/tools/get_target_cofactor_info.py +46 -0
  718. tooluniverse/tools/get_taxonomy_by_pdb_id.py +46 -0
  719. tooluniverse/tools/get_tiledb_info.py +46 -0
  720. tooluniverse/tools/get_tiledbsoma_info.py +46 -0
  721. tooluniverse/tools/get_torch_geometric_info.py +49 -0
  722. tooluniverse/tools/get_tqdm_info.py +46 -0
  723. tooluniverse/tools/get_trackpy_info.py +46 -0
  724. tooluniverse/tools/get_tskit_info.py +46 -0
  725. tooluniverse/tools/get_umap_learn_info.py +49 -0
  726. tooluniverse/tools/get_uniprot_accession_by_entity_id.py +49 -0
  727. tooluniverse/tools/get_velocyto_info.py +44 -0
  728. tooluniverse/tools/get_viennarna_info.py +49 -0
  729. tooluniverse/tools/get_webpage_text_from_url.py +52 -0
  730. tooluniverse/tools/get_webpage_title.py +49 -0
  731. tooluniverse/tools/get_xarray_info.py +44 -0
  732. tooluniverse/tools/get_xesmf_info.py +44 -0
  733. tooluniverse/tools/get_xgboost_info.py +44 -0
  734. tooluniverse/tools/get_zarr_info.py +44 -0
  735. tooluniverse/tools/gwas_get_association_by_id.py +49 -0
  736. tooluniverse/tools/gwas_get_associations_for_snp.py +67 -0
  737. tooluniverse/tools/gwas_get_associations_for_study.py +55 -0
  738. tooluniverse/tools/gwas_get_associations_for_trait.py +55 -0
  739. tooluniverse/tools/gwas_get_snp_by_id.py +46 -0
  740. tooluniverse/tools/gwas_get_snps_for_gene.py +55 -0
  741. tooluniverse/tools/gwas_get_studies_for_trait.py +75 -0
  742. tooluniverse/tools/gwas_get_study_by_id.py +46 -0
  743. tooluniverse/tools/gwas_get_variants_for_trait.py +55 -0
  744. tooluniverse/tools/gwas_search_associations.py +75 -0
  745. tooluniverse/tools/gwas_search_snps.py +63 -0
  746. tooluniverse/tools/gwas_search_studies.py +75 -0
  747. tooluniverse/tools/humanbase_ppi_analysis.py +67 -0
  748. tooluniverse/tools/mesh_get_subjects_by_pharmacological_action.py +63 -0
  749. tooluniverse/tools/mesh_get_subjects_by_subject_id.py +63 -0
  750. tooluniverse/tools/mesh_get_subjects_by_subject_name.py +63 -0
  751. tooluniverse/tools/mesh_get_subjects_by_subject_scope_or_definition.py +63 -0
  752. tooluniverse/tools/odphp_itemlist.py +49 -0
  753. tooluniverse/tools/odphp_myhealthfinder.py +67 -0
  754. tooluniverse/tools/odphp_outlink_fetch.py +59 -0
  755. tooluniverse/tools/odphp_topicsearch.py +67 -0
  756. tooluniverse/tools/openalex_literature_search.py +67 -0
  757. tooluniverse/tools/reactome_disease_target_score.py +52 -0
  758. tooluniverse/tools/search_clinical_trials.py +67 -0
  759. tooluniverse/tools/visualize_molecule_2d.py +83 -0
  760. tooluniverse/tools/visualize_molecule_3d.py +91 -0
  761. tooluniverse/tools/visualize_protein_structure_3d.py +79 -0
  762. tooluniverse/unified_guideline_tools.py +1210 -0
  763. tooluniverse/unpaywall_tool.py +0 -1
  764. tooluniverse/utils.py +71 -2
  765. tooluniverse/visualization_tool.py +897 -0
  766. tooluniverse/wikidata_sparql_tool.py +1 -2
  767. tooluniverse/zenodo_tool.py +1 -3
  768. {tooluniverse-1.0.6.dist-info → tooluniverse-1.0.7.dist-info}/METADATA +11 -2
  769. tooluniverse-1.0.7.dist-info/RECORD +855 -0
  770. {tooluniverse-1.0.6.dist-info → tooluniverse-1.0.7.dist-info}/entry_points.txt +3 -0
  771. tooluniverse/test/list_azure_openai_models.py +0 -210
  772. tooluniverse/test/mcp_server_test.py +0 -0
  773. tooluniverse/test/test_admetai_tool.py +0 -370
  774. tooluniverse/test/test_agentic_tool.py +0 -129
  775. tooluniverse/test/test_agentic_tool_azure_models.py +0 -91
  776. tooluniverse/test/test_alphafold_tool.py +0 -108
  777. tooluniverse/test/test_api_key_validation_min.py +0 -64
  778. tooluniverse/test/test_chem_tool.py +0 -37
  779. tooluniverse/test/test_claude_sdk.py +0 -93
  780. tooluniverse/test/test_compose_lieraturereview.py +0 -63
  781. tooluniverse/test/test_compose_tool.py +0 -448
  782. tooluniverse/test/test_dailymed.py +0 -69
  783. tooluniverse/test/test_dataset_tool.py +0 -200
  784. tooluniverse/test/test_disease_target_score.py +0 -56
  785. tooluniverse/test/test_drugbank_filter_examples.py +0 -179
  786. tooluniverse/test/test_efo.py +0 -31
  787. tooluniverse/test/test_enrichr_tool.py +0 -21
  788. tooluniverse/test/test_europe_pmc_tool.py +0 -20
  789. tooluniverse/test/test_fda_adv.py +0 -95
  790. tooluniverse/test/test_fda_drug_labeling.py +0 -91
  791. tooluniverse/test/test_gene_ontology_tools.py +0 -66
  792. tooluniverse/test/test_global_fallback.py +0 -288
  793. tooluniverse/test/test_gwas_tool.py +0 -139
  794. tooluniverse/test/test_hooks_direct.py +0 -219
  795. tooluniverse/test/test_hpa.py +0 -625
  796. tooluniverse/test/test_humanbase_tool.py +0 -20
  797. tooluniverse/test/test_idmap_tools.py +0 -61
  798. tooluniverse/test/test_list_built_in_tools.py +0 -33
  799. tooluniverse/test/test_mcp_server.py +0 -211
  800. tooluniverse/test/test_mcp_tool.py +0 -247
  801. tooluniverse/test/test_medlineplus.py +0 -220
  802. tooluniverse/test/test_odphp_tool.py +0 -166
  803. tooluniverse/test/test_openalex_tool.py +0 -32
  804. tooluniverse/test/test_openrouter_client.py +0 -288
  805. tooluniverse/test/test_opentargets.py +0 -28
  806. tooluniverse/test/test_pubchem_tool.py +0 -116
  807. tooluniverse/test/test_pubtator_tool.py +0 -37
  808. tooluniverse/test/test_rcsb_pdb_tool.py +0 -86
  809. tooluniverse/test/test_reactome.py +0 -54
  810. tooluniverse/test/test_semantic_scholar_tool.py +0 -24
  811. tooluniverse/test/test_software_tools.py +0 -147
  812. tooluniverse/test/test_stdio_hooks.py +0 -285
  813. tooluniverse/test/test_tool_description_optimizer.py +0 -49
  814. tooluniverse/test/test_tool_finder.py +0 -26
  815. tooluniverse/test/test_tool_finder_llm.py +0 -252
  816. tooluniverse/test/test_tools_find.py +0 -195
  817. tooluniverse/test/test_uniprot_tools.py +0 -74
  818. tooluniverse/test/test_uspto_tool.py +0 -72
  819. tooluniverse/test/test_xml_tool.py +0 -113
  820. tooluniverse-1.0.6.dist-info/RECORD +0 -230
  821. {tooluniverse-1.0.6.dist-info → tooluniverse-1.0.7.dist-info}/WHEEL +0 -0
  822. {tooluniverse-1.0.6.dist-info → tooluniverse-1.0.7.dist-info}/licenses/LICENSE +0 -0
  823. {tooluniverse-1.0.6.dist-info → tooluniverse-1.0.7.dist-info}/top_level.txt +0 -0
@@ -0,0 +1,1738 @@
1
+ """
2
+ ToolUniverse Tools
3
+
4
+ Type-safe Python interface to 654 scientific tools.
5
+ Each tool is in its own module for minimal import overhead.
6
+
7
+ Usage:
8
+ from tooluniverse.tools import ArXiv_search_papers
9
+ result = ArXiv_search_papers(query="machine learning")
10
+ """
11
+
12
+ # Import exceptions from main package
13
+
14
+ # Import shared client utilities
15
+ from ._shared_client import get_shared_client, reset_shared_client
16
+
17
+ # Import all tools
18
+ from .ADMETAI_predict_BBB_penetrance import ADMETAI_predict_BBB_penetrance
19
+ from .ADMETAI_predict_CYP_interactions import ADMETAI_predict_CYP_interactions
20
+ from .ADMETAI_predict_bioavailability import ADMETAI_predict_bioavailability
21
+ from .ADMETAI_predict_clearance_distribution import (
22
+ ADMETAI_predict_clearance_distribution,
23
+ )
24
+ from .ADMETAI_predict_nuclear_receptor_activity import (
25
+ ADMETAI_predict_nuclear_receptor_activity,
26
+ )
27
+ from .ADMETAI_predict_physicochemical_properties import (
28
+ ADMETAI_predict_physicochemical_properties,
29
+ )
30
+ from .ADMETAI_predict_solubility_lipophilicity_hydration import (
31
+ ADMETAI_predict_solubility_lipophilicity_hydration,
32
+ )
33
+ from .ADMETAI_predict_stress_response import ADMETAI_predict_stress_response
34
+ from .ADMETAI_predict_toxicity import ADMETAI_predict_toxicity
35
+ from .AdvancedCodeQualityAnalyzer import AdvancedCodeQualityAnalyzer
36
+ from .AdverseEventICDMapper import AdverseEventICDMapper
37
+ from .AdverseEventPredictionQuestionGenerator import (
38
+ AdverseEventPredictionQuestionGenerator,
39
+ )
40
+ from .AdverseEventPredictionQuestionGeneratorWithContext import (
41
+ AdverseEventPredictionQuestionGeneratorWithContext,
42
+ )
43
+ from .ArXiv_search_papers import ArXiv_search_papers
44
+ from .ArgumentDescriptionOptimizer import ArgumentDescriptionOptimizer
45
+ from .BioRxiv_search_preprints import BioRxiv_search_preprints
46
+ from .BiomarkerDiscoveryWorkflow import BiomarkerDiscoveryWorkflow
47
+ from .CORE_search_papers import CORE_search_papers
48
+ from .CallAgent import CallAgent
49
+ from .ChEMBL_search_similar_molecules import ChEMBL_search_similar_molecules
50
+ from .CodeOptimizer import CodeOptimizer
51
+ from .CodeQualityAnalyzer import CodeQualityAnalyzer
52
+ from .ComprehensiveDrugDiscoveryPipeline import ComprehensiveDrugDiscoveryPipeline
53
+ from .Crossref_search_works import Crossref_search_works
54
+ from .DBLP_search_publications import DBLP_search_publications
55
+ from .DOAJ_search_articles import DOAJ_search_articles
56
+ from .DailyMed_get_spl_by_setid import DailyMed_get_spl_by_setid
57
+ from .DailyMed_search_spls import DailyMed_search_spls
58
+ from .DataAnalysisValidityReviewer import DataAnalysisValidityReviewer
59
+ from .DescriptionAnalyzer import DescriptionAnalyzer
60
+ from .DescriptionQualityEvaluator import DescriptionQualityEvaluator
61
+ from .DomainExpertValidator import DomainExpertValidator
62
+ from .DrugSafetyAnalyzer import DrugSafetyAnalyzer
63
+ from .EthicalComplianceReviewer import EthicalComplianceReviewer
64
+ from .EuropePMC_Guidelines_Search import EuropePMC_Guidelines_Search
65
+ from .EuropePMC_search_articles import EuropePMC_search_articles
66
+ from .ExperimentalDesignScorer import ExperimentalDesignScorer
67
+ from .FAERS_count_additive_administration_routes import (
68
+ FAERS_count_additive_administration_routes,
69
+ )
70
+ from .FAERS_count_additive_adverse_reactions import (
71
+ FAERS_count_additive_adverse_reactions,
72
+ )
73
+ from .FAERS_count_additive_event_reports_by_country import (
74
+ FAERS_count_additive_event_reports_by_country,
75
+ )
76
+ from .FAERS_count_additive_reaction_outcomes import (
77
+ FAERS_count_additive_reaction_outcomes,
78
+ )
79
+ from .FAERS_count_additive_reports_by_reporter_country import (
80
+ FAERS_count_additive_reports_by_reporter_country,
81
+ )
82
+ from .FAERS_count_additive_seriousness_classification import (
83
+ FAERS_count_additive_seriousness_classification,
84
+ )
85
+ from .FAERS_count_country_by_drug_event import FAERS_count_country_by_drug_event
86
+ from .FAERS_count_death_related_by_drug import FAERS_count_death_related_by_drug
87
+ from .FAERS_count_drug_routes_by_event import FAERS_count_drug_routes_by_event
88
+ from .FAERS_count_drugs_by_drug_event import FAERS_count_drugs_by_drug_event
89
+ from .FAERS_count_outcomes_by_drug_event import FAERS_count_outcomes_by_drug_event
90
+ from .FAERS_count_patient_age_distribution import FAERS_count_patient_age_distribution
91
+ from .FAERS_count_reactions_by_drug_event import FAERS_count_reactions_by_drug_event
92
+ from .FAERS_count_reportercountry_by_drug_event import (
93
+ FAERS_count_reportercountry_by_drug_event,
94
+ )
95
+ from .FAERS_count_seriousness_by_drug_event import FAERS_count_seriousness_by_drug_event
96
+ from .FDA_get_abuse_dependence_info_by_drug_name import (
97
+ FDA_get_abuse_dependence_info_by_drug_name,
98
+ )
99
+ from .FDA_get_abuse_info_by_drug_name import FDA_get_abuse_info_by_drug_name
100
+ from .FDA_get_accessories_info_by_drug_name import FDA_get_accessories_info_by_drug_name
101
+ from .FDA_get_active_ingredient_info_by_drug_name import (
102
+ FDA_get_active_ingredient_info_by_drug_name,
103
+ )
104
+ from .FDA_get_adverse_reactions_by_drug_name import (
105
+ FDA_get_adverse_reactions_by_drug_name,
106
+ )
107
+ from .FDA_get_alarms_by_drug_name import FDA_get_alarms_by_drug_name
108
+ from .FDA_get_animal_pharmacology_info_by_drug_name import (
109
+ FDA_get_animal_pharmacology_info_by_drug_name,
110
+ )
111
+ from .FDA_get_assembly_installation_info_by_drug_name import (
112
+ FDA_get_assembly_installation_info_by_drug_name,
113
+ )
114
+ from .FDA_get_boxed_warning_info_by_drug_name import (
115
+ FDA_get_boxed_warning_info_by_drug_name,
116
+ )
117
+ from .FDA_get_brand_name_generic_name import FDA_get_brand_name_generic_name
118
+ from .FDA_get_calibration_instructions_by_drug_name import (
119
+ FDA_get_calibration_instructions_by_drug_name,
120
+ )
121
+ from .FDA_get_carcinogenic_mutagenic_fertility_by_drug_name import (
122
+ FDA_get_carcinogenic_mutagenic_fertility_by_drug_name,
123
+ )
124
+ from .FDA_get_child_safety_info_by_drug_name import (
125
+ FDA_get_child_safety_info_by_drug_name,
126
+ )
127
+ from .FDA_get_clinical_pharmacology_by_drug_name import (
128
+ FDA_get_clinical_pharmacology_by_drug_name,
129
+ )
130
+ from .FDA_get_clinical_studies_info_by_drug_name import (
131
+ FDA_get_clinical_studies_info_by_drug_name,
132
+ )
133
+ from .FDA_get_contact_for_questions_info_by_drug_name import (
134
+ FDA_get_contact_for_questions_info_by_drug_name,
135
+ )
136
+ from .FDA_get_contraindications_by_drug_name import (
137
+ FDA_get_contraindications_by_drug_name,
138
+ )
139
+ from .FDA_get_controlled_substance_DEA_schedule_info_by_drug_name import (
140
+ FDA_get_controlled_substance_DEA_schedule_info_by_drug_name,
141
+ )
142
+ from .FDA_get_dear_health_care_provider_letter_info_by_drug_name import (
143
+ FDA_get_dear_health_care_provider_letter_info_by_drug_name,
144
+ )
145
+ from .FDA_get_dependence_info_by_drug_name import FDA_get_dependence_info_by_drug_name
146
+ from .FDA_get_disposal_info_by_drug_name import FDA_get_disposal_info_by_drug_name
147
+ from .FDA_get_do_not_use_info_by_drug_name import FDA_get_do_not_use_info_by_drug_name
148
+ from .FDA_get_document_id_by_drug_name import FDA_get_document_id_by_drug_name
149
+ from .FDA_get_dosage_and_storage_information_by_drug_name import (
150
+ FDA_get_dosage_and_storage_information_by_drug_name,
151
+ )
152
+ from .FDA_get_dosage_forms_and_strengths_by_drug_name import (
153
+ FDA_get_dosage_forms_and_strengths_by_drug_name,
154
+ )
155
+ from .FDA_get_drug_generic_name import FDA_get_drug_generic_name
156
+ from .FDA_get_drug_interactions_by_drug_name import (
157
+ FDA_get_drug_interactions_by_drug_name,
158
+ )
159
+ from .FDA_get_drug_name_by_SPL_ID import FDA_get_drug_name_by_SPL_ID
160
+ from .FDA_get_drug_name_by_adverse_reaction import FDA_get_drug_name_by_adverse_reaction
161
+ from .FDA_get_drug_name_by_calibration_instructions import (
162
+ FDA_get_drug_name_by_calibration_instructions,
163
+ )
164
+ from .FDA_get_drug_name_by_dependence_info import FDA_get_drug_name_by_dependence_info
165
+ from .FDA_get_drug_name_by_document_id import FDA_get_drug_name_by_document_id
166
+ from .FDA_get_drug_name_by_dosage_info import FDA_get_drug_name_by_dosage_info
167
+ from .FDA_get_drug_name_by_environmental_warning import (
168
+ FDA_get_drug_name_by_environmental_warning,
169
+ )
170
+ from .FDA_get_drug_name_by_inactive_ingredient import (
171
+ FDA_get_drug_name_by_inactive_ingredient,
172
+ )
173
+ from .FDA_get_drug_name_by_info_on_conditions_for_doctor_consultation import (
174
+ FDA_get_drug_name_by_info_on_conditions_for_doctor_consultation,
175
+ )
176
+ from .FDA_get_drug_name_by_labor_and_delivery_info import (
177
+ FDA_get_drug_name_by_labor_and_delivery_info,
178
+ )
179
+ from .FDA_get_drug_name_by_microbiology import FDA_get_drug_name_by_microbiology
180
+ from .FDA_get_drug_name_by_other_safety_info import (
181
+ FDA_get_drug_name_by_other_safety_info,
182
+ )
183
+ from .FDA_get_drug_name_by_pharmacodynamics import FDA_get_drug_name_by_pharmacodynamics
184
+ from .FDA_get_drug_name_by_pharmacogenomics import FDA_get_drug_name_by_pharmacogenomics
185
+ from .FDA_get_drug_name_by_precautions import FDA_get_drug_name_by_precautions
186
+ from .FDA_get_drug_name_by_pregnancy_or_breastfeeding_info import (
187
+ FDA_get_drug_name_by_pregnancy_or_breastfeeding_info,
188
+ )
189
+ from .FDA_get_drug_name_by_principal_display_panel import (
190
+ FDA_get_drug_name_by_principal_display_panel,
191
+ )
192
+ from .FDA_get_drug_name_by_reference import FDA_get_drug_name_by_reference
193
+ from .FDA_get_drug_name_by_set_id import FDA_get_drug_name_by_set_id
194
+ from .FDA_get_drug_name_by_stop_use_info import FDA_get_drug_name_by_stop_use_info
195
+ from .FDA_get_drug_name_by_storage_and_handling_info import (
196
+ FDA_get_drug_name_by_storage_and_handling_info,
197
+ )
198
+ from .FDA_get_drug_name_by_warnings import FDA_get_drug_name_by_warnings
199
+ from .FDA_get_drug_name_from_patient_package_insert import (
200
+ FDA_get_drug_name_from_patient_package_insert,
201
+ )
202
+ from .FDA_get_drug_names_by_abuse_dependence_info import (
203
+ FDA_get_drug_names_by_abuse_dependence_info,
204
+ )
205
+ from .FDA_get_drug_names_by_abuse_info import FDA_get_drug_names_by_abuse_info
206
+ from .FDA_get_drug_names_by_accessories import FDA_get_drug_names_by_accessories
207
+ from .FDA_get_drug_names_by_active_ingredient import (
208
+ FDA_get_drug_names_by_active_ingredient,
209
+ )
210
+ from .FDA_get_drug_names_by_alarm import FDA_get_drug_names_by_alarm
211
+ from .FDA_get_drug_names_by_animal_pharmacology_info import (
212
+ FDA_get_drug_names_by_animal_pharmacology_info,
213
+ )
214
+ from .FDA_get_drug_names_by_application_number_NDC_number import (
215
+ FDA_get_drug_names_by_application_number_NDC_number,
216
+ )
217
+ from .FDA_get_drug_names_by_assembly_installation_info import (
218
+ FDA_get_drug_names_by_assembly_installation_info,
219
+ )
220
+ from .FDA_get_drug_names_by_boxed_warning import FDA_get_drug_names_by_boxed_warning
221
+ from .FDA_get_drug_names_by_child_safety_info import (
222
+ FDA_get_drug_names_by_child_safety_info,
223
+ )
224
+ from .FDA_get_drug_names_by_clinical_pharmacology import (
225
+ FDA_get_drug_names_by_clinical_pharmacology,
226
+ )
227
+ from .FDA_get_drug_names_by_clinical_studies import (
228
+ FDA_get_drug_names_by_clinical_studies,
229
+ )
230
+ from .FDA_get_drug_names_by_consulting_doctor_pharmacist_info import (
231
+ FDA_get_drug_names_by_consulting_doctor_pharmacist_info,
232
+ )
233
+ from .FDA_get_drug_names_by_contraindications import (
234
+ FDA_get_drug_names_by_contraindications,
235
+ )
236
+ from .FDA_get_drug_names_by_controlled_substance_DEA_schedule import (
237
+ FDA_get_drug_names_by_controlled_substance_DEA_schedule,
238
+ )
239
+ from .FDA_get_drug_names_by_dear_health_care_provider_letter_info import (
240
+ FDA_get_drug_names_by_dear_health_care_provider_letter_info,
241
+ )
242
+ from .FDA_get_drug_names_by_disposal_info import FDA_get_drug_names_by_disposal_info
243
+ from .FDA_get_drug_names_by_dosage_forms_and_strengths_info import (
244
+ FDA_get_drug_names_by_dosage_forms_and_strengths_info,
245
+ )
246
+ from .FDA_get_drug_names_by_drug_interactions import (
247
+ FDA_get_drug_names_by_drug_interactions,
248
+ )
249
+ from .FDA_get_drug_names_by_effective_time import FDA_get_drug_names_by_effective_time
250
+ from .FDA_get_drug_names_by_food_safety_warnings import (
251
+ FDA_get_drug_names_by_food_safety_warnings,
252
+ )
253
+ from .FDA_get_drug_names_by_general_precautions import (
254
+ FDA_get_drug_names_by_general_precautions,
255
+ )
256
+ from .FDA_get_drug_names_by_geriatric_use import FDA_get_drug_names_by_geriatric_use
257
+ from .FDA_get_drug_names_by_health_claim import FDA_get_drug_names_by_health_claim
258
+ from .FDA_get_drug_names_by_indication import FDA_get_drug_names_by_indication
259
+ from .FDA_get_drug_names_by_info_for_nursing_mothers import (
260
+ FDA_get_drug_names_by_info_for_nursing_mothers,
261
+ )
262
+ from .FDA_get_drug_names_by_information_for_owners_or_caregivers import (
263
+ FDA_get_drug_names_by_information_for_owners_or_caregivers,
264
+ )
265
+ from .FDA_get_drug_names_by_ingredient import FDA_get_drug_names_by_ingredient
266
+ from .FDA_get_drug_names_by_instructions_for_use import (
267
+ FDA_get_drug_names_by_instructions_for_use,
268
+ )
269
+ from .FDA_get_drug_names_by_lab_test_interference import (
270
+ FDA_get_drug_names_by_lab_test_interference,
271
+ )
272
+ from .FDA_get_drug_names_by_lab_tests import FDA_get_drug_names_by_lab_tests
273
+ from .FDA_get_drug_names_by_mechanism_of_action import (
274
+ FDA_get_drug_names_by_mechanism_of_action,
275
+ )
276
+ from .FDA_get_drug_names_by_medication_guide import (
277
+ FDA_get_drug_names_by_medication_guide,
278
+ )
279
+ from .FDA_get_drug_names_by_nonclinical_toxicology_info import (
280
+ FDA_get_drug_names_by_nonclinical_toxicology_info,
281
+ )
282
+ from .FDA_get_drug_names_by_nonteratogenic_effects import (
283
+ FDA_get_drug_names_by_nonteratogenic_effects,
284
+ )
285
+ from .FDA_get_drug_names_by_overdosage_info import FDA_get_drug_names_by_overdosage_info
286
+ from .FDA_get_drug_names_by_pediatric_use import FDA_get_drug_names_by_pediatric_use
287
+ from .FDA_get_drug_names_by_pharmacokinetics import (
288
+ FDA_get_drug_names_by_pharmacokinetics,
289
+ )
290
+ from .FDA_get_drug_names_by_population_use import FDA_get_drug_names_by_population_use
291
+ from .FDA_get_drug_names_by_pregnancy_effects_info import (
292
+ FDA_get_drug_names_by_pregnancy_effects_info,
293
+ )
294
+ from .FDA_get_drug_names_by_residue_warning import FDA_get_drug_names_by_residue_warning
295
+ from .FDA_get_drug_names_by_risk import FDA_get_drug_names_by_risk
296
+ from .FDA_get_drug_names_by_route import FDA_get_drug_names_by_route
297
+ from .FDA_get_drug_names_by_safe_handling_warning import (
298
+ FDA_get_drug_names_by_safe_handling_warning,
299
+ )
300
+ from .FDA_get_drug_names_by_safety_summary import FDA_get_drug_names_by_safety_summary
301
+ from .FDA_get_drug_names_by_spl_indexing_data_elements import (
302
+ FDA_get_drug_names_by_spl_indexing_data_elements,
303
+ )
304
+ from .FDA_get_drug_names_by_teratogenic_effects import (
305
+ FDA_get_drug_names_by_teratogenic_effects,
306
+ )
307
+ from .FDA_get_drug_names_by_user_safety_warning import (
308
+ FDA_get_drug_names_by_user_safety_warning,
309
+ )
310
+ from .FDA_get_drug_names_by_warnings_and_cautions import (
311
+ FDA_get_drug_names_by_warnings_and_cautions,
312
+ )
313
+ from .FDA_get_drugs_by_carcinogenic_mutagenic_fertility import (
314
+ FDA_get_drugs_by_carcinogenic_mutagenic_fertility,
315
+ )
316
+ from .FDA_get_effective_time_by_drug_name import FDA_get_effective_time_by_drug_name
317
+ from .FDA_get_environmental_warning_by_drug_name import (
318
+ FDA_get_environmental_warning_by_drug_name,
319
+ )
320
+ from .FDA_get_general_precautions_by_drug_name import (
321
+ FDA_get_general_precautions_by_drug_name,
322
+ )
323
+ from .FDA_get_geriatric_use_info_by_drug_name import (
324
+ FDA_get_geriatric_use_info_by_drug_name,
325
+ )
326
+ from .FDA_get_health_claims_by_drug_name import FDA_get_health_claims_by_drug_name
327
+ from .FDA_get_inactive_ingredient_info_by_drug_name import (
328
+ FDA_get_inactive_ingredient_info_by_drug_name,
329
+ )
330
+ from .FDA_get_indications_by_drug_name import FDA_get_indications_by_drug_name
331
+ from .FDA_get_info_for_nursing_mothers_by_drug_name import (
332
+ FDA_get_info_for_nursing_mothers_by_drug_name,
333
+ )
334
+ from .FDA_get_info_for_patients_by_drug_name import (
335
+ FDA_get_info_for_patients_by_drug_name,
336
+ )
337
+ from .FDA_get_info_on_conditions_for_doctor_consultation_by_drug_name import (
338
+ FDA_get_info_on_conditions_for_doctor_consultation_by_drug_name,
339
+ )
340
+ from .FDA_get_info_on_consulting_doctor_pharmacist_by_drug_name import (
341
+ FDA_get_info_on_consulting_doctor_pharmacist_by_drug_name,
342
+ )
343
+ from .FDA_get_information_for_owners_or_caregivers_by_drug_name import (
344
+ FDA_get_information_for_owners_or_caregivers_by_drug_name,
345
+ )
346
+ from .FDA_get_ingredients_by_drug_name import FDA_get_ingredients_by_drug_name
347
+ from .FDA_get_instructions_for_use_by_drug_name import (
348
+ FDA_get_instructions_for_use_by_drug_name,
349
+ )
350
+ from .FDA_get_lab_test_interference_info_by_drug_name import (
351
+ FDA_get_lab_test_interference_info_by_drug_name,
352
+ )
353
+ from .FDA_get_lab_tests_by_drug_name import FDA_get_lab_tests_by_drug_name
354
+ from .FDA_get_labor_and_delivery_info_by_drug_name import (
355
+ FDA_get_labor_and_delivery_info_by_drug_name,
356
+ )
357
+ from .FDA_get_manufacturer_name_NDC_number_by_drug_name import (
358
+ FDA_get_manufacturer_name_NDC_number_by_drug_name,
359
+ )
360
+ from .FDA_get_mechanism_of_action_by_drug_name import (
361
+ FDA_get_mechanism_of_action_by_drug_name,
362
+ )
363
+ from .FDA_get_medication_guide_info_by_drug_name import (
364
+ FDA_get_medication_guide_info_by_drug_name,
365
+ )
366
+ from .FDA_get_microbiology_info_by_drug_name import (
367
+ FDA_get_microbiology_info_by_drug_name,
368
+ )
369
+ from .FDA_get_nonclinical_toxicology_info_by_drug_name import (
370
+ FDA_get_nonclinical_toxicology_info_by_drug_name,
371
+ )
372
+ from .FDA_get_nonteratogenic_effects_by_drug_name import (
373
+ FDA_get_nonteratogenic_effects_by_drug_name,
374
+ )
375
+ from .FDA_get_other_safety_info_by_drug_name import (
376
+ FDA_get_other_safety_info_by_drug_name,
377
+ )
378
+ from .FDA_get_overdosage_info_by_drug_name import FDA_get_overdosage_info_by_drug_name
379
+ from .FDA_get_patient_package_insert_from_drug_name import (
380
+ FDA_get_patient_package_insert_from_drug_name,
381
+ )
382
+ from .FDA_get_pediatric_use_info_by_drug_name import (
383
+ FDA_get_pediatric_use_info_by_drug_name,
384
+ )
385
+ from .FDA_get_pharmacodynamics_by_drug_name import FDA_get_pharmacodynamics_by_drug_name
386
+ from .FDA_get_pharmacogenomics_info_by_drug_name import (
387
+ FDA_get_pharmacogenomics_info_by_drug_name,
388
+ )
389
+ from .FDA_get_pharmacokinetics_by_drug_name import FDA_get_pharmacokinetics_by_drug_name
390
+ from .FDA_get_population_use_info_by_drug_name import (
391
+ FDA_get_population_use_info_by_drug_name,
392
+ )
393
+ from .FDA_get_precautions_by_drug_name import FDA_get_precautions_by_drug_name
394
+ from .FDA_get_pregnancy_effects_info_by_drug_name import (
395
+ FDA_get_pregnancy_effects_info_by_drug_name,
396
+ )
397
+ from .FDA_get_pregnancy_or_breastfeeding_info_by_drug_name import (
398
+ FDA_get_pregnancy_or_breastfeeding_info_by_drug_name,
399
+ )
400
+ from .FDA_get_principal_display_panel_by_drug_name import (
401
+ FDA_get_principal_display_panel_by_drug_name,
402
+ )
403
+ from .FDA_get_purpose_info_by_drug_name import FDA_get_purpose_info_by_drug_name
404
+ from .FDA_get_recent_changes_by_drug_name import FDA_get_recent_changes_by_drug_name
405
+ from .FDA_get_reference_info_by_drug_name import FDA_get_reference_info_by_drug_name
406
+ from .FDA_get_residue_warning_by_drug_name import FDA_get_residue_warning_by_drug_name
407
+ from .FDA_get_risk_info_by_drug_name import FDA_get_risk_info_by_drug_name
408
+ from .FDA_get_route_info_by_drug_name import FDA_get_route_info_by_drug_name
409
+ from .FDA_get_safe_handling_warnings_by_drug_name import (
410
+ FDA_get_safe_handling_warnings_by_drug_name,
411
+ )
412
+ from .FDA_get_safety_summary_by_drug_name import FDA_get_safety_summary_by_drug_name
413
+ from .FDA_get_spl_indexing_data_elements_by_drug_name import (
414
+ FDA_get_spl_indexing_data_elements_by_drug_name,
415
+ )
416
+ from .FDA_get_spl_unclassified_section_by_drug_name import (
417
+ FDA_get_spl_unclassified_section_by_drug_name,
418
+ )
419
+ from .FDA_get_stop_use_info_by_drug_name import FDA_get_stop_use_info_by_drug_name
420
+ from .FDA_get_storage_and_handling_info_by_drug_name import (
421
+ FDA_get_storage_and_handling_info_by_drug_name,
422
+ )
423
+ from .FDA_get_teratogenic_effects_by_drug_name import (
424
+ FDA_get_teratogenic_effects_by_drug_name,
425
+ )
426
+ from .FDA_get_user_safety_warning_by_drug_names import (
427
+ FDA_get_user_safety_warning_by_drug_names,
428
+ )
429
+ from .FDA_get_warnings_and_cautions_by_drug_name import (
430
+ FDA_get_warnings_and_cautions_by_drug_name,
431
+ )
432
+ from .FDA_get_warnings_by_drug_name import FDA_get_warnings_by_drug_name
433
+ from .FDA_get_when_using_info import FDA_get_when_using_info
434
+ from .FDA_retrieve_device_use_by_drug_name import FDA_retrieve_device_use_by_drug_name
435
+ from .FDA_retrieve_drug_name_by_device_use import FDA_retrieve_drug_name_by_device_use
436
+ from .FDA_retrieve_drug_names_by_patient_medication_info import (
437
+ FDA_retrieve_drug_names_by_patient_medication_info,
438
+ )
439
+ from .FDA_retrieve_patient_medication_info_by_drug_name import (
440
+ FDA_retrieve_patient_medication_info_by_drug_name,
441
+ )
442
+ from .Fatcat_search_scholar import Fatcat_search_scholar
443
+ from .Finish import Finish
444
+ from .GO_get_annotations_for_gene import GO_get_annotations_for_gene
445
+ from .GO_get_genes_for_term import GO_get_genes_for_term
446
+ from .GO_get_term_by_id import GO_get_term_by_id
447
+ from .GO_get_term_details import GO_get_term_details
448
+ from .GO_search_terms import GO_search_terms
449
+ from .HAL_search_archive import HAL_search_archive
450
+ from .HPA_get_biological_processes_by_gene import HPA_get_biological_processes_by_gene
451
+ from .HPA_get_cancer_prognostics_by_gene import HPA_get_cancer_prognostics_by_gene
452
+ from .HPA_get_comparative_expression_by_gene_and_cellline import (
453
+ HPA_get_comparative_expression_by_gene_and_cellline,
454
+ )
455
+ from .HPA_get_comprehensive_gene_details_by_ensembl_id import (
456
+ HPA_get_comprehensive_gene_details_by_ensembl_id,
457
+ )
458
+ from .HPA_get_contextual_biological_process_analysis import (
459
+ HPA_get_contextual_biological_process_analysis,
460
+ )
461
+ from .HPA_get_disease_expression_by_gene_tissue_disease import (
462
+ HPA_get_disease_expression_by_gene_tissue_disease,
463
+ )
464
+ from .HPA_get_gene_basic_info_by_ensembl_id import HPA_get_gene_basic_info_by_ensembl_id
465
+ from .HPA_get_gene_tsv_data_by_ensembl_id import HPA_get_gene_tsv_data_by_ensembl_id
466
+ from .HPA_get_protein_interactions_by_gene import HPA_get_protein_interactions_by_gene
467
+ from .HPA_get_rna_expression_by_source import HPA_get_rna_expression_by_source
468
+ from .HPA_get_rna_expression_in_specific_tissues import (
469
+ HPA_get_rna_expression_in_specific_tissues,
470
+ )
471
+ from .HPA_get_subcellular_location import HPA_get_subcellular_location
472
+ from .HPA_search_genes_by_query import HPA_search_genes_by_query
473
+ from .HypothesisGenerator import HypothesisGenerator
474
+ from .LabelGenerator import LabelGenerator
475
+ from .LiteratureContextReviewer import LiteratureContextReviewer
476
+ from .LiteratureSearchTool import LiteratureSearchTool
477
+ from .MedRxiv_search_preprints import MedRxiv_search_preprints
478
+ from .MedicalLiteratureReviewer import MedicalLiteratureReviewer
479
+ from .MedicalTermNormalizer import MedicalTermNormalizer
480
+ from .MedlinePlus_connect_lookup_by_code import MedlinePlus_connect_lookup_by_code
481
+ from .MedlinePlus_get_genetics_condition_by_name import (
482
+ MedlinePlus_get_genetics_condition_by_name,
483
+ )
484
+ from .MedlinePlus_get_genetics_gene_by_name import MedlinePlus_get_genetics_gene_by_name
485
+ from .MedlinePlus_get_genetics_index import MedlinePlus_get_genetics_index
486
+ from .MedlinePlus_search_topics_by_keyword import MedlinePlus_search_topics_by_keyword
487
+ from .MethodologyRigorReviewer import MethodologyRigorReviewer
488
+ from .MultiAgentLiteratureSearch import MultiAgentLiteratureSearch
489
+ from .NICE_Clinical_Guidelines_Search import NICE_Clinical_Guidelines_Search
490
+ from .NICE_Guideline_Full_Text import NICE_Guideline_Full_Text
491
+ from .NoveltySignificanceReviewer import NoveltySignificanceReviewer
492
+ from .OSF_search_preprints import OSF_search_preprints
493
+ from .OSL_get_efo_id_by_disease_name import OSL_get_efo_id_by_disease_name
494
+ from .OpenAIRE_search_publications import OpenAIRE_search_publications
495
+ from .OpenAlex_Guidelines_Search import OpenAlex_Guidelines_Search
496
+ from .OpenTargets_drug_pharmacogenomics_data import (
497
+ OpenTargets_drug_pharmacogenomics_data,
498
+ )
499
+ from .OpenTargets_get_approved_indications_by_drug_chemblId import (
500
+ OpenTargets_get_approved_indications_by_drug_chemblId,
501
+ )
502
+ from .OpenTargets_get_associated_diseases_by_drug_chemblId import (
503
+ OpenTargets_get_associated_diseases_by_drug_chemblId,
504
+ )
505
+ from .OpenTargets_get_associated_drugs_by_disease_efoId import (
506
+ OpenTargets_get_associated_drugs_by_disease_efoId,
507
+ )
508
+ from .OpenTargets_get_associated_drugs_by_target_ensemblID import (
509
+ OpenTargets_get_associated_drugs_by_target_ensemblID,
510
+ )
511
+ from .OpenTargets_get_associated_phenotypes_by_disease_efoId import (
512
+ OpenTargets_get_associated_phenotypes_by_disease_efoId,
513
+ )
514
+ from .OpenTargets_get_associated_targets_by_disease_efoId import (
515
+ OpenTargets_get_associated_targets_by_disease_efoId,
516
+ )
517
+ from .OpenTargets_get_associated_targets_by_drug_chemblId import (
518
+ OpenTargets_get_associated_targets_by_drug_chemblId,
519
+ )
520
+ from .OpenTargets_get_biological_mouse_models_by_ensemblID import (
521
+ OpenTargets_get_biological_mouse_models_by_ensemblID,
522
+ )
523
+ from .OpenTargets_get_chemical_probes_by_target_ensemblID import (
524
+ OpenTargets_get_chemical_probes_by_target_ensemblID,
525
+ )
526
+ from .OpenTargets_get_disease_ancestors_parents_by_efoId import (
527
+ OpenTargets_get_disease_ancestors_parents_by_efoId,
528
+ )
529
+ from .OpenTargets_get_disease_descendants_children_by_efoId import (
530
+ OpenTargets_get_disease_descendants_children_by_efoId,
531
+ )
532
+ from .OpenTargets_get_disease_description_by_efoId import (
533
+ OpenTargets_get_disease_description_by_efoId,
534
+ )
535
+ from .OpenTargets_get_disease_id_description_by_name import (
536
+ OpenTargets_get_disease_id_description_by_name,
537
+ )
538
+ from .OpenTargets_get_disease_ids_by_efoId import OpenTargets_get_disease_ids_by_efoId
539
+ from .OpenTargets_get_disease_ids_by_name import OpenTargets_get_disease_ids_by_name
540
+ from .OpenTargets_get_disease_locations_by_efoId import (
541
+ OpenTargets_get_disease_locations_by_efoId,
542
+ )
543
+ from .OpenTargets_get_disease_synonyms_by_efoId import (
544
+ OpenTargets_get_disease_synonyms_by_efoId,
545
+ )
546
+ from .OpenTargets_get_disease_therapeutic_areas_by_efoId import (
547
+ OpenTargets_get_disease_therapeutic_areas_by_efoId,
548
+ )
549
+ from .OpenTargets_get_diseases_phenotypes_by_target_ensembl import (
550
+ OpenTargets_get_diseases_phenotypes_by_target_ensembl,
551
+ )
552
+ from .OpenTargets_get_drug_adverse_events_by_chemblId import (
553
+ OpenTargets_get_drug_adverse_events_by_chemblId,
554
+ )
555
+ from .OpenTargets_get_drug_approval_status_by_chemblId import (
556
+ OpenTargets_get_drug_approval_status_by_chemblId,
557
+ )
558
+ from .OpenTargets_get_drug_chembId_by_generic_name import (
559
+ OpenTargets_get_drug_chembId_by_generic_name,
560
+ )
561
+ from .OpenTargets_get_drug_description_by_chemblId import (
562
+ OpenTargets_get_drug_description_by_chemblId,
563
+ )
564
+ from .OpenTargets_get_drug_id_description_by_name import (
565
+ OpenTargets_get_drug_id_description_by_name,
566
+ )
567
+ from .OpenTargets_get_drug_indications_by_chemblId import (
568
+ OpenTargets_get_drug_indications_by_chemblId,
569
+ )
570
+ from .OpenTargets_get_drug_mechanisms_of_action_by_chemblId import (
571
+ OpenTargets_get_drug_mechanisms_of_action_by_chemblId,
572
+ )
573
+ from .OpenTargets_get_drug_synonyms_by_chemblId import (
574
+ OpenTargets_get_drug_synonyms_by_chemblId,
575
+ )
576
+ from .OpenTargets_get_drug_trade_names_by_chemblId import (
577
+ OpenTargets_get_drug_trade_names_by_chemblId,
578
+ )
579
+ from .OpenTargets_get_drug_warnings_by_chemblId import (
580
+ OpenTargets_get_drug_warnings_by_chemblId,
581
+ )
582
+ from .OpenTargets_get_drug_withdrawn_blackbox_status_by_chemblId import (
583
+ OpenTargets_get_drug_withdrawn_blackbox_status_by_chemblId,
584
+ )
585
+ from .OpenTargets_get_gene_ontology_terms_by_goID import (
586
+ OpenTargets_get_gene_ontology_terms_by_goID,
587
+ )
588
+ from .OpenTargets_get_known_drugs_by_drug_chemblId import (
589
+ OpenTargets_get_known_drugs_by_drug_chemblId,
590
+ )
591
+ from .OpenTargets_get_parent_child_molecules_by_drug_chembl_ID import (
592
+ OpenTargets_get_parent_child_molecules_by_drug_chembl_ID,
593
+ )
594
+ from .OpenTargets_get_publications_by_disease_efoId import (
595
+ OpenTargets_get_publications_by_disease_efoId,
596
+ )
597
+ from .OpenTargets_get_publications_by_drug_chemblId import (
598
+ OpenTargets_get_publications_by_drug_chemblId,
599
+ )
600
+ from .OpenTargets_get_publications_by_target_ensemblID import (
601
+ OpenTargets_get_publications_by_target_ensemblID,
602
+ )
603
+ from .OpenTargets_get_similar_entities_by_disease_efoId import (
604
+ OpenTargets_get_similar_entities_by_disease_efoId,
605
+ )
606
+ from .OpenTargets_get_similar_entities_by_drug_chemblId import (
607
+ OpenTargets_get_similar_entities_by_drug_chemblId,
608
+ )
609
+ from .OpenTargets_get_similar_entities_by_target_ensemblID import (
610
+ OpenTargets_get_similar_entities_by_target_ensemblID,
611
+ )
612
+ from .OpenTargets_get_target_classes_by_ensemblID import (
613
+ OpenTargets_get_target_classes_by_ensemblID,
614
+ )
615
+ from .OpenTargets_get_target_constraint_info_by_ensemblID import (
616
+ OpenTargets_get_target_constraint_info_by_ensemblID,
617
+ )
618
+ from .OpenTargets_get_target_enabling_packages_by_ensemblID import (
619
+ OpenTargets_get_target_enabling_packages_by_ensemblID,
620
+ )
621
+ from .OpenTargets_get_target_gene_ontology_by_ensemblID import (
622
+ OpenTargets_get_target_gene_ontology_by_ensemblID,
623
+ )
624
+ from .OpenTargets_get_target_genomic_location_by_ensemblID import (
625
+ OpenTargets_get_target_genomic_location_by_ensemblID,
626
+ )
627
+ from .OpenTargets_get_target_homologues_by_ensemblID import (
628
+ OpenTargets_get_target_homologues_by_ensemblID,
629
+ )
630
+ from .OpenTargets_get_target_id_description_by_name import (
631
+ OpenTargets_get_target_id_description_by_name,
632
+ )
633
+ from .OpenTargets_get_target_interactions_by_ensemblID import (
634
+ OpenTargets_get_target_interactions_by_ensemblID,
635
+ )
636
+ from .OpenTargets_get_target_safety_profile_by_ensemblID import (
637
+ OpenTargets_get_target_safety_profile_by_ensemblID,
638
+ )
639
+ from .OpenTargets_get_target_subcellular_locations_by_ensemblID import (
640
+ OpenTargets_get_target_subcellular_locations_by_ensemblID,
641
+ )
642
+ from .OpenTargets_get_target_synonyms_by_ensemblID import (
643
+ OpenTargets_get_target_synonyms_by_ensemblID,
644
+ )
645
+ from .OpenTargets_get_target_tractability_by_ensemblID import (
646
+ OpenTargets_get_target_tractability_by_ensemblID,
647
+ )
648
+ from .OpenTargets_map_any_disease_id_to_all_other_ids import (
649
+ OpenTargets_map_any_disease_id_to_all_other_ids,
650
+ )
651
+ from .OpenTargets_multi_entity_search_by_query_string import (
652
+ OpenTargets_multi_entity_search_by_query_string,
653
+ )
654
+ from .OpenTargets_search_category_counts_by_query_string import (
655
+ OpenTargets_search_category_counts_by_query_string,
656
+ )
657
+ from .OpenTargets_target_disease_evidence import OpenTargets_target_disease_evidence
658
+ from .OutputSummarizationComposer import OutputSummarizationComposer
659
+ from .PMC_search_papers import PMC_search_papers
660
+ from .ProtocolOptimizer import ProtocolOptimizer
661
+ from .PubChem_get_CID_by_SMILES import PubChem_get_CID_by_SMILES
662
+ from .PubChem_get_CID_by_compound_name import PubChem_get_CID_by_compound_name
663
+ from .PubChem_get_associated_patents_by_CID import PubChem_get_associated_patents_by_CID
664
+ from .PubChem_get_compound_2D_image_by_CID import PubChem_get_compound_2D_image_by_CID
665
+ from .PubChem_get_compound_properties_by_CID import (
666
+ PubChem_get_compound_properties_by_CID,
667
+ )
668
+ from .PubChem_get_compound_synonyms_by_CID import PubChem_get_compound_synonyms_by_CID
669
+ from .PubChem_get_compound_xrefs_by_CID import PubChem_get_compound_xrefs_by_CID
670
+ from .PubChem_search_compounds_by_similarity import (
671
+ PubChem_search_compounds_by_similarity,
672
+ )
673
+ from .PubChem_search_compounds_by_substructure import (
674
+ PubChem_search_compounds_by_substructure,
675
+ )
676
+ from .PubMed_Guidelines_Search import PubMed_Guidelines_Search
677
+ from .PubMed_search_articles import PubMed_search_articles
678
+ from .PubTator3_EntityAutocomplete import PubTator3_EntityAutocomplete
679
+ from .PubTator3_LiteratureSearch import PubTator3_LiteratureSearch
680
+ from .QuestionRephraser import QuestionRephraser
681
+ from .Reactome_get_pathway_reactions import Reactome_get_pathway_reactions
682
+ from .ReproducibilityTransparencyReviewer import ReproducibilityTransparencyReviewer
683
+ from .ResultsInterpretationReviewer import ResultsInterpretationReviewer
684
+ from .ScientificTextSummarizer import ScientificTextSummarizer
685
+ from .SemanticScholar_search_papers import SemanticScholar_search_papers
686
+ from .TRIP_Database_Guidelines_Search import TRIP_Database_Guidelines_Search
687
+ from .TestCaseGenerator import TestCaseGenerator
688
+ from .ToolCompatibilityAnalyzer import ToolCompatibilityAnalyzer
689
+ from .ToolDescriptionOptimizer import ToolDescriptionOptimizer
690
+ from .ToolDiscover import ToolDiscover
691
+ from .ToolGraphComposer import ToolGraphComposer
692
+ from .ToolGraphGenerationPipeline import ToolGraphGenerationPipeline
693
+ from .ToolImplementationGenerator import ToolImplementationGenerator
694
+ from .ToolMetadataGenerationPipeline import ToolMetadataGenerationPipeline
695
+ from .ToolMetadataGenerator import ToolMetadataGenerator
696
+ from .ToolMetadataStandardizer import ToolMetadataStandardizer
697
+ from .ToolOptimizer import ToolOptimizer
698
+ from .ToolOutputSummarizer import ToolOutputSummarizer
699
+ from .ToolQualityEvaluator import ToolQualityEvaluator
700
+ from .ToolRelationshipDetector import ToolRelationshipDetector
701
+ from .ToolSpecificationGenerator import ToolSpecificationGenerator
702
+ from .ToolSpecificationOptimizer import ToolSpecificationOptimizer
703
+ from .Tool_Finder import Tool_Finder
704
+ from .Tool_Finder_Keyword import Tool_Finder_Keyword
705
+ from .Tool_Finder_LLM import Tool_Finder_LLM
706
+ from .Tool_RAG import Tool_RAG
707
+ from .UniProt_get_alternative_names_by_accession import (
708
+ UniProt_get_alternative_names_by_accession,
709
+ )
710
+ from .UniProt_get_disease_variants_by_accession import (
711
+ UniProt_get_disease_variants_by_accession,
712
+ )
713
+ from .UniProt_get_entry_by_accession import UniProt_get_entry_by_accession
714
+ from .UniProt_get_function_by_accession import UniProt_get_function_by_accession
715
+ from .UniProt_get_isoform_ids_by_accession import UniProt_get_isoform_ids_by_accession
716
+ from .UniProt_get_organism_by_accession import UniProt_get_organism_by_accession
717
+ from .UniProt_get_ptm_processing_by_accession import (
718
+ UniProt_get_ptm_processing_by_accession,
719
+ )
720
+ from .UniProt_get_recommended_name_by_accession import (
721
+ UniProt_get_recommended_name_by_accession,
722
+ )
723
+ from .UniProt_get_sequence_by_accession import UniProt_get_sequence_by_accession
724
+ from .UniProt_get_subcellular_location_by_accession import (
725
+ UniProt_get_subcellular_location_by_accession,
726
+ )
727
+ from .Unpaywall_check_oa_status import Unpaywall_check_oa_status
728
+ from .WHO_Guideline_Full_Text import WHO_Guideline_Full_Text
729
+ from .WHO_Guidelines_Search import WHO_Guidelines_Search
730
+ from .Wikidata_SPARQL_query import Wikidata_SPARQL_query
731
+ from .WritingPresentationReviewer import WritingPresentationReviewer
732
+ from .Zenodo_search_records import Zenodo_search_records
733
+ from .alphafold_get_annotations import alphafold_get_annotations
734
+ from .alphafold_get_prediction import alphafold_get_prediction
735
+ from .alphafold_get_summary import alphafold_get_summary
736
+ from .call_agentic_human import call_agentic_human
737
+ from .cancer_biomarkers_disease_target_score import (
738
+ cancer_biomarkers_disease_target_score,
739
+ )
740
+ from .cancer_gene_census_disease_target_score import (
741
+ cancer_gene_census_disease_target_score,
742
+ )
743
+ from .cellosaurus_get_cell_line_info import cellosaurus_get_cell_line_info
744
+ from .cellosaurus_query_converter import cellosaurus_query_converter
745
+ from .cellosaurus_search_cell_lines import cellosaurus_search_cell_lines
746
+ from .chembl_disease_target_score import chembl_disease_target_score
747
+ from .dict_search import dict_search
748
+ from .dili_search import dili_search
749
+ from .diqt_search import diqt_search
750
+ from .disease_target_score import disease_target_score
751
+ from .drugbank_filter_drugs_by_name import drugbank_filter_drugs_by_name
752
+ from .drugbank_full_search import drugbank_full_search
753
+ from .drugbank_get_drug_basic_info_by_drug_name_or_drugbank_id import (
754
+ drugbank_get_drug_basic_info_by_drug_name_or_drugbank_id,
755
+ )
756
+ from .drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id import (
757
+ drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id,
758
+ )
759
+ from .drugbank_get_drug_interactions_by_drug_name_or_drugbank_id import (
760
+ drugbank_get_drug_interactions_by_drug_name_or_drugbank_id,
761
+ )
762
+ from .drugbank_get_drug_name_and_description_by_indication import (
763
+ drugbank_get_drug_name_and_description_by_indication,
764
+ )
765
+ from .drugbank_get_drug_name_and_description_by_pathway_name import (
766
+ drugbank_get_drug_name_and_description_by_pathway_name,
767
+ )
768
+ from .drugbank_get_drug_name_and_description_by_target_name import (
769
+ drugbank_get_drug_name_and_description_by_target_name,
770
+ )
771
+ from .drugbank_get_drug_name_description_pharmacology_by_mechanism_of_action import (
772
+ drugbank_get_drug_name_description_pharmacology_by_mechanism_of_action,
773
+ )
774
+ from .drugbank_get_drug_pathways_and_reactions_by_drug_name_or_drugbank_id import (
775
+ drugbank_get_drug_pathways_and_reactions_by_drug_name_or_drugbank_id,
776
+ )
777
+ from .drugbank_get_drug_products_by_name_or_drugbank_id import (
778
+ drugbank_get_drug_products_by_name_or_drugbank_id,
779
+ )
780
+ from .drugbank_get_drug_references_by_drug_name_or_drugbank_id import (
781
+ drugbank_get_drug_references_by_drug_name_or_drugbank_id,
782
+ )
783
+ from .drugbank_get_indications_by_drug_name_or_drugbank_id import (
784
+ drugbank_get_indications_by_drug_name_or_drugbank_id,
785
+ )
786
+ from .drugbank_get_pharmacology_by_drug_name_or_drugbank_id import (
787
+ drugbank_get_pharmacology_by_drug_name_or_drugbank_id,
788
+ )
789
+ from .drugbank_get_safety_by_drug_name_or_drugbank_id import (
790
+ drugbank_get_safety_by_drug_name_or_drugbank_id,
791
+ )
792
+ from .drugbank_get_targets_by_drug_name_or_drugbank_id import (
793
+ drugbank_get_targets_by_drug_name_or_drugbank_id,
794
+ )
795
+ from .drugbank_links_search import drugbank_links_search
796
+ from .drugbank_vocab_filter import drugbank_vocab_filter
797
+ from .drugbank_vocab_search import drugbank_vocab_search
798
+ from .embedding_database_add import embedding_database_add
799
+ from .embedding_database_create import embedding_database_create
800
+ from .embedding_database_load import embedding_database_load
801
+ from .embedding_database_search import embedding_database_search
802
+ from .embedding_sync_download import embedding_sync_download
803
+ from .embedding_sync_upload import embedding_sync_upload
804
+ from .enrichr_gene_enrichment_analysis import enrichr_gene_enrichment_analysis
805
+ from .europepmc_disease_target_score import europepmc_disease_target_score
806
+ from .eva_disease_target_score import eva_disease_target_score
807
+ from .eva_somatic_disease_target_score import eva_somatic_disease_target_score
808
+ from .expression_atlas_disease_target_score import expression_atlas_disease_target_score
809
+ from .extract_clinical_trial_adverse_events import extract_clinical_trial_adverse_events
810
+ from .extract_clinical_trial_outcomes import extract_clinical_trial_outcomes
811
+ from .genomics_england_disease_target_score import genomics_england_disease_target_score
812
+ from .get_HPO_ID_by_phenotype import get_HPO_ID_by_phenotype
813
+ from .get_albumentations_info import get_albumentations_info
814
+ from .get_altair_info import get_altair_info
815
+ from .get_anndata_info import get_anndata_info
816
+ from .get_arboreto_info import get_arboreto_info
817
+ from .get_arxiv_info import get_arxiv_info
818
+ from .get_ase_info import get_ase_info
819
+ from .get_assembly_info_by_pdb_id import get_assembly_info_by_pdb_id
820
+ from .get_assembly_summary import get_assembly_summary
821
+ from .get_astropy_info import get_astropy_info
822
+ from .get_binding_affinity_by_pdb_id import get_binding_affinity_by_pdb_id
823
+ from .get_biopandas_info import get_biopandas_info
824
+ from .get_biopython_info import get_biopython_info
825
+ from .get_bioservices_info import get_bioservices_info
826
+ from .get_biotite_info import get_biotite_info
827
+ from .get_bokeh_info import get_bokeh_info
828
+ from .get_brian2_info import get_brian2_info
829
+ from .get_cartopy_info import get_cartopy_info
830
+ from .get_catboost_info import get_catboost_info
831
+ from .get_cellpose_info import get_cellpose_info
832
+ from .get_cellrank_info import get_cellrank_info
833
+ from .get_cellxgene_census_info import get_cellxgene_census_info
834
+ from .get_cftime_info import get_cftime_info
835
+ from .get_chem_comp_audit_info import get_chem_comp_audit_info
836
+ from .get_chem_comp_charge_and_ambiguity import get_chem_comp_charge_and_ambiguity
837
+ from .get_chembl_webresource_client_info import get_chembl_webresource_client_info
838
+ from .get_citation_info_by_pdb_id import get_citation_info_by_pdb_id
839
+ from .get_clair3_info import get_clair3_info
840
+ from .get_clinical_trial_conditions_and_interventions import (
841
+ get_clinical_trial_conditions_and_interventions,
842
+ )
843
+ from .get_clinical_trial_descriptions import get_clinical_trial_descriptions
844
+ from .get_clinical_trial_eligibility_criteria import (
845
+ get_clinical_trial_eligibility_criteria,
846
+ )
847
+ from .get_clinical_trial_locations import get_clinical_trial_locations
848
+ from .get_clinical_trial_outcome_measures import get_clinical_trial_outcome_measures
849
+ from .get_clinical_trial_references import get_clinical_trial_references
850
+ from .get_clinical_trial_status_and_dates import get_clinical_trial_status_and_dates
851
+ from .get_cobra_info import get_cobra_info
852
+ from .get_cobrapy_info import get_cobrapy_info
853
+ from .get_cooler_info import get_cooler_info
854
+ from .get_core_refinement_statistics import get_core_refinement_statistics
855
+ from .get_cryosparc_tools_info import get_cryosparc_tools_info
856
+ from .get_crystal_growth_conditions_by_pdb_id import (
857
+ get_crystal_growth_conditions_by_pdb_id,
858
+ )
859
+ from .get_crystallization_ph_by_pdb_id import get_crystallization_ph_by_pdb_id
860
+ from .get_crystallographic_properties_by_pdb_id import (
861
+ get_crystallographic_properties_by_pdb_id,
862
+ )
863
+ from .get_cupy_info import get_cupy_info
864
+ from .get_cyvcf2_info import get_cyvcf2_info
865
+ from .get_dask_info import get_dask_info
866
+ from .get_datamol_info import get_datamol_info
867
+ from .get_datashader_info import get_datashader_info
868
+ from .get_deepchem_info import get_deepchem_info
869
+ from .get_deeppurpose_info import get_deeppurpose_info
870
+ from .get_deeptools_info import get_deeptools_info
871
+ from .get_deepxde_info import get_deepxde_info
872
+ from .get_dendropy_info import get_dendropy_info
873
+ from .get_descriptastorus_info import get_descriptastorus_info
874
+ from .get_diffdock_info import get_diffdock_info
875
+ from .get_dscribe_info import get_dscribe_info
876
+ from .get_ec_number_by_entity_id import get_ec_number_by_entity_id
877
+ from .get_elephant_info import get_elephant_info
878
+ from .get_em_3d_fitting_and_reconstruction_details import (
879
+ get_em_3d_fitting_and_reconstruction_details,
880
+ )
881
+ from .get_emdb_ids_by_pdb_id import get_emdb_ids_by_pdb_id
882
+ from .get_episcanpy_info import get_episcanpy_info
883
+ from .get_ete3_info import get_ete3_info
884
+ from .get_faiss_info import get_faiss_info
885
+ from .get_fanc_info import get_fanc_info
886
+ from .get_flask_info import get_flask_info
887
+ from .get_flowio_info import get_flowio_info
888
+ from .get_flowkit_info import get_flowkit_info
889
+ from .get_flowutils_info import get_flowutils_info
890
+ from .get_freesasa_info import get_freesasa_info
891
+ from .get_galpy_info import get_galpy_info
892
+ from .get_gene_name_by_entity_id import get_gene_name_by_entity_id
893
+ from .get_geopandas_info import get_geopandas_info
894
+ from .get_gget_info import get_gget_info
895
+ from .get_googlesearch_python_info import get_googlesearch_python_info
896
+ from .get_gseapy_info import get_gseapy_info
897
+ from .get_h5py_info import get_h5py_info
898
+ from .get_harmony_pytorch_info import get_harmony_pytorch_info
899
+ from .get_hmmlearn_info import get_hmmlearn_info
900
+ from .get_holoviews_info import get_holoviews_info
901
+ from .get_host_organism_by_pdb_id import get_host_organism_by_pdb_id
902
+ from .get_htmd_info import get_htmd_info
903
+ from .get_hyperopt_info import get_hyperopt_info
904
+ from .get_igraph_info import get_igraph_info
905
+ from .get_imageio_info import get_imageio_info
906
+ from .get_imbalanced_learn_info import get_imbalanced_learn_info
907
+ from .get_jcvi_info import get_jcvi_info
908
+ from .get_joblib_info import get_joblib_info
909
+ from .get_joint_associated_diseases_by_HPO_ID_list import (
910
+ get_joint_associated_diseases_by_HPO_ID_list,
911
+ )
912
+ from .get_khmer_info import get_khmer_info
913
+ from .get_kipoiseq_info import get_kipoiseq_info
914
+ from .get_lifelines_info import get_lifelines_info
915
+ from .get_ligand_bond_count_by_pdb_id import get_ligand_bond_count_by_pdb_id
916
+ from .get_ligand_smiles_by_chem_comp_id import get_ligand_smiles_by_chem_comp_id
917
+ from .get_lightgbm_info import get_lightgbm_info
918
+ from .get_loompy_info import get_loompy_info
919
+ from .get_mageck_info import get_mageck_info
920
+ from .get_matplotlib_info import get_matplotlib_info
921
+ from .get_mdanalysis_info import get_mdanalysis_info
922
+ from .get_mdtraj_info import get_mdtraj_info
923
+ from .get_mne_info import get_mne_info
924
+ from .get_molfeat_info import get_molfeat_info
925
+ from .get_molvs_info import get_molvs_info
926
+ from .get_mordred_info import get_mordred_info
927
+ from .get_msprime_info import get_msprime_info
928
+ from .get_mudata_info import get_mudata_info
929
+ from .get_mutation_annotations_by_pdb_id import get_mutation_annotations_by_pdb_id
930
+ from .get_neo_info import get_neo_info
931
+ from .get_netcdf4_info import get_netcdf4_info
932
+ from .get_networkx_info import get_networkx_info
933
+ from .get_nglview_info import get_nglview_info
934
+ from .get_nilearn_info import get_nilearn_info
935
+ from .get_numba_info import get_numba_info
936
+ from .get_numpy_info import get_numpy_info
937
+ from .get_oligosaccharide_descriptors_by_entity_id import (
938
+ get_oligosaccharide_descriptors_by_entity_id,
939
+ )
940
+ from .get_openbabel_info import get_openbabel_info
941
+ from .get_openchem_info import get_openchem_info
942
+ from .get_opencv_info import get_opencv_info
943
+ from .get_openmm_info import get_openmm_info
944
+ from .get_optlang_info import get_optlang_info
945
+ from .get_optuna_info import get_optuna_info
946
+ from .get_palantir_info import get_palantir_info
947
+ from .get_pandas_info import get_pandas_info
948
+ from .get_patsy_info import get_patsy_info
949
+ from .get_pdbfixer_info import get_pdbfixer_info
950
+ from .get_phenotype_by_HPO_ID import get_phenotype_by_HPO_ID
951
+ from .get_pillow_info import get_pillow_info
952
+ from .get_plantcv_info import get_plantcv_info
953
+ from .get_plip_info import get_plip_info
954
+ from .get_plotly_info import get_plotly_info
955
+ from .get_poliastro_info import get_poliastro_info
956
+ from .get_polymer_entity_annotations import get_polymer_entity_annotations
957
+ from .get_polymer_entity_count_by_pdb_id import get_polymer_entity_count_by_pdb_id
958
+ from .get_polymer_entity_ids_by_pdb_id import get_polymer_entity_ids_by_pdb_id
959
+ from .get_polymer_entity_type_by_entity_id import get_polymer_entity_type_by_entity_id
960
+ from .get_polymer_molecular_weight_by_entity_id import (
961
+ get_polymer_molecular_weight_by_entity_id,
962
+ )
963
+ from .get_poretools_info import get_poretools_info
964
+ from .get_prody_info import get_prody_info
965
+ from .get_protein_classification_by_pdb_id import get_protein_classification_by_pdb_id
966
+ from .get_protein_metadata_by_pdb_id import get_protein_metadata_by_pdb_id
967
+ from .get_pubchempy_info import get_pubchempy_info
968
+ from .get_pybedtools_info import get_pybedtools_info
969
+ from .get_pybigwig_info import get_pybigwig_info
970
+ from .get_pydeseq2_info import get_pydeseq2_info
971
+ from .get_pyensembl_info import get_pyensembl_info
972
+ from .get_pyephem_info import get_pyephem_info
973
+ from .get_pyfaidx_info import get_pyfaidx_info
974
+ from .get_pyfasta_info import get_pyfasta_info
975
+ from .get_pykalman_info import get_pykalman_info
976
+ from .get_pyliftover_info import get_pyliftover_info
977
+ from .get_pymassspec_info import get_pymassspec_info
978
+ from .get_pymed_info import get_pymed_info
979
+ from .get_pymzml_info import get_pymzml_info
980
+ from .get_pypdf2_info import get_pypdf2_info
981
+ from .get_pyranges_info import get_pyranges_info
982
+ from .get_pyrosetta_info import get_pyrosetta_info
983
+ from .get_pysam_info import get_pysam_info
984
+ from .get_pyscenic_info import get_pyscenic_info
985
+ from .get_pyscf_info import get_pyscf_info
986
+ from .get_pyscreener_info import get_pyscreener_info
987
+ from .get_pytdc_info import get_pytdc_info
988
+ from .get_python_libsbml_info import get_python_libsbml_info
989
+ from .get_pytorch_info import get_pytorch_info
990
+ from .get_pyvcf_info import get_pyvcf_info
991
+ from .get_pyvis_info import get_pyvis_info
992
+ from .get_qutip_info import get_qutip_info
993
+ from .get_rasterio_info import get_rasterio_info
994
+ from .get_rdkit_info import get_rdkit_info
995
+ from .get_refinement_resolution_by_pdb_id import get_refinement_resolution_by_pdb_id
996
+ from .get_release_deposit_dates_by_pdb_id import get_release_deposit_dates_by_pdb_id
997
+ from .get_reportlab_info import get_reportlab_info
998
+ from .get_requests_info import get_requests_info
999
+ from .get_ruptures_info import get_ruptures_info
1000
+ from .get_scanorama_info import get_scanorama_info
1001
+ from .get_scanpy_info import get_scanpy_info
1002
+ from .get_schnetpack_info import get_schnetpack_info
1003
+ from .get_scholarly_info import get_scholarly_info
1004
+ from .get_scikit_bio_info import get_scikit_bio_info
1005
+ from .get_scikit_image_info import get_scikit_image_info
1006
+ from .get_scikit_learn_info import get_scikit_learn_info
1007
+ from .get_scipy_info import get_scipy_info
1008
+ from .get_scrublet_info import get_scrublet_info
1009
+ from .get_scvelo_info import get_scvelo_info
1010
+ from .get_scvi_tools_info import get_scvi_tools_info
1011
+ from .get_seaborn_info import get_seaborn_info
1012
+ from .get_sequence_by_pdb_id import get_sequence_by_pdb_id
1013
+ from .get_sequence_lengths_by_pdb_id import get_sequence_lengths_by_pdb_id
1014
+ from .get_sequence_positional_features_by_instance_id import (
1015
+ get_sequence_positional_features_by_instance_id,
1016
+ )
1017
+ from .get_skopt_info import get_skopt_info
1018
+ from .get_souporcell_info import get_souporcell_info
1019
+ from .get_source_organism_by_pdb_id import get_source_organism_by_pdb_id
1020
+ from .get_space_group_by_pdb_id import get_space_group_by_pdb_id
1021
+ from .get_statsmodels_info import get_statsmodels_info
1022
+ from .get_structure_determination_software_by_pdb_id import (
1023
+ get_structure_determination_software_by_pdb_id,
1024
+ )
1025
+ from .get_structure_title_by_pdb_id import get_structure_title_by_pdb_id
1026
+ from .get_structure_validation_metrics_by_pdb_id import (
1027
+ get_structure_validation_metrics_by_pdb_id,
1028
+ )
1029
+ from .get_sunpy_info import get_sunpy_info
1030
+ from .get_sympy_info import get_sympy_info
1031
+ from .get_target_cofactor_info import get_target_cofactor_info
1032
+ from .get_taxonomy_by_pdb_id import get_taxonomy_by_pdb_id
1033
+ from .get_tiledb_info import get_tiledb_info
1034
+ from .get_tiledbsoma_info import get_tiledbsoma_info
1035
+ from .get_torch_geometric_info import get_torch_geometric_info
1036
+ from .get_tqdm_info import get_tqdm_info
1037
+ from .get_trackpy_info import get_trackpy_info
1038
+ from .get_tskit_info import get_tskit_info
1039
+ from .get_umap_learn_info import get_umap_learn_info
1040
+ from .get_uniprot_accession_by_entity_id import get_uniprot_accession_by_entity_id
1041
+ from .get_velocyto_info import get_velocyto_info
1042
+ from .get_viennarna_info import get_viennarna_info
1043
+ from .get_webpage_text_from_url import get_webpage_text_from_url
1044
+ from .get_webpage_title import get_webpage_title
1045
+ from .get_xarray_info import get_xarray_info
1046
+ from .get_xesmf_info import get_xesmf_info
1047
+ from .get_xgboost_info import get_xgboost_info
1048
+ from .get_zarr_info import get_zarr_info
1049
+ from .gwas_get_association_by_id import gwas_get_association_by_id
1050
+ from .gwas_get_associations_for_snp import gwas_get_associations_for_snp
1051
+ from .gwas_get_associations_for_study import gwas_get_associations_for_study
1052
+ from .gwas_get_associations_for_trait import gwas_get_associations_for_trait
1053
+ from .gwas_get_snp_by_id import gwas_get_snp_by_id
1054
+ from .gwas_get_snps_for_gene import gwas_get_snps_for_gene
1055
+ from .gwas_get_studies_for_trait import gwas_get_studies_for_trait
1056
+ from .gwas_get_study_by_id import gwas_get_study_by_id
1057
+ from .gwas_get_variants_for_trait import gwas_get_variants_for_trait
1058
+ from .gwas_search_associations import gwas_search_associations
1059
+ from .gwas_search_snps import gwas_search_snps
1060
+ from .gwas_search_studies import gwas_search_studies
1061
+ from .humanbase_ppi_analysis import humanbase_ppi_analysis
1062
+ from .mesh_get_subjects_by_pharmacological_action import (
1063
+ mesh_get_subjects_by_pharmacological_action,
1064
+ )
1065
+ from .mesh_get_subjects_by_subject_id import mesh_get_subjects_by_subject_id
1066
+ from .mesh_get_subjects_by_subject_name import mesh_get_subjects_by_subject_name
1067
+ from .mesh_get_subjects_by_subject_scope_or_definition import (
1068
+ mesh_get_subjects_by_subject_scope_or_definition,
1069
+ )
1070
+ from .odphp_itemlist import odphp_itemlist
1071
+ from .odphp_myhealthfinder import odphp_myhealthfinder
1072
+ from .odphp_outlink_fetch import odphp_outlink_fetch
1073
+ from .odphp_topicsearch import odphp_topicsearch
1074
+ from .openalex_literature_search import openalex_literature_search
1075
+ from .reactome_disease_target_score import reactome_disease_target_score
1076
+ from .search_clinical_trials import search_clinical_trials
1077
+ from .visualize_molecule_2d import visualize_molecule_2d
1078
+ from .visualize_molecule_3d import visualize_molecule_3d
1079
+ from .visualize_protein_structure_3d import visualize_protein_structure_3d
1080
+
1081
+ __all__ = [
1082
+ "get_shared_client",
1083
+ "reset_shared_client",
1084
+ "ADMETAI_predict_BBB_penetrance",
1085
+ "ADMETAI_predict_CYP_interactions",
1086
+ "ADMETAI_predict_bioavailability",
1087
+ "ADMETAI_predict_clearance_distribution",
1088
+ "ADMETAI_predict_nuclear_receptor_activity",
1089
+ "ADMETAI_predict_physicochemical_properties",
1090
+ "ADMETAI_predict_solubility_lipophilicity_hydration",
1091
+ "ADMETAI_predict_stress_response",
1092
+ "ADMETAI_predict_toxicity",
1093
+ "AdvancedCodeQualityAnalyzer",
1094
+ "AdverseEventICDMapper",
1095
+ "AdverseEventPredictionQuestionGenerator",
1096
+ "AdverseEventPredictionQuestionGeneratorWithContext",
1097
+ "ArXiv_search_papers",
1098
+ "ArgumentDescriptionOptimizer",
1099
+ "BioRxiv_search_preprints",
1100
+ "BiomarkerDiscoveryWorkflow",
1101
+ "CORE_search_papers",
1102
+ "CallAgent",
1103
+ "ChEMBL_search_similar_molecules",
1104
+ "CodeOptimizer",
1105
+ "CodeQualityAnalyzer",
1106
+ "ComprehensiveDrugDiscoveryPipeline",
1107
+ "Crossref_search_works",
1108
+ "DBLP_search_publications",
1109
+ "DOAJ_search_articles",
1110
+ "DailyMed_get_spl_by_setid",
1111
+ "DailyMed_search_spls",
1112
+ "DataAnalysisValidityReviewer",
1113
+ "DescriptionAnalyzer",
1114
+ "DescriptionQualityEvaluator",
1115
+ "DomainExpertValidator",
1116
+ "DrugSafetyAnalyzer",
1117
+ "EthicalComplianceReviewer",
1118
+ "EuropePMC_Guidelines_Search",
1119
+ "EuropePMC_search_articles",
1120
+ "ExperimentalDesignScorer",
1121
+ "FAERS_count_additive_administration_routes",
1122
+ "FAERS_count_additive_adverse_reactions",
1123
+ "FAERS_count_additive_event_reports_by_country",
1124
+ "FAERS_count_additive_reaction_outcomes",
1125
+ "FAERS_count_additive_reports_by_reporter_country",
1126
+ "FAERS_count_additive_seriousness_classification",
1127
+ "FAERS_count_country_by_drug_event",
1128
+ "FAERS_count_death_related_by_drug",
1129
+ "FAERS_count_drug_routes_by_event",
1130
+ "FAERS_count_drugs_by_drug_event",
1131
+ "FAERS_count_outcomes_by_drug_event",
1132
+ "FAERS_count_patient_age_distribution",
1133
+ "FAERS_count_reactions_by_drug_event",
1134
+ "FAERS_count_reportercountry_by_drug_event",
1135
+ "FAERS_count_seriousness_by_drug_event",
1136
+ "FDA_get_abuse_dependence_info_by_drug_name",
1137
+ "FDA_get_abuse_info_by_drug_name",
1138
+ "FDA_get_accessories_info_by_drug_name",
1139
+ "FDA_get_active_ingredient_info_by_drug_name",
1140
+ "FDA_get_adverse_reactions_by_drug_name",
1141
+ "FDA_get_alarms_by_drug_name",
1142
+ "FDA_get_animal_pharmacology_info_by_drug_name",
1143
+ "FDA_get_assembly_installation_info_by_drug_name",
1144
+ "FDA_get_boxed_warning_info_by_drug_name",
1145
+ "FDA_get_brand_name_generic_name",
1146
+ "FDA_get_calibration_instructions_by_drug_name",
1147
+ "FDA_get_carcinogenic_mutagenic_fertility_by_drug_name",
1148
+ "FDA_get_child_safety_info_by_drug_name",
1149
+ "FDA_get_clinical_pharmacology_by_drug_name",
1150
+ "FDA_get_clinical_studies_info_by_drug_name",
1151
+ "FDA_get_contact_for_questions_info_by_drug_name",
1152
+ "FDA_get_contraindications_by_drug_name",
1153
+ "FDA_get_controlled_substance_DEA_schedule_info_by_drug_name",
1154
+ "FDA_get_dear_health_care_provider_letter_info_by_drug_name",
1155
+ "FDA_get_dependence_info_by_drug_name",
1156
+ "FDA_get_disposal_info_by_drug_name",
1157
+ "FDA_get_do_not_use_info_by_drug_name",
1158
+ "FDA_get_document_id_by_drug_name",
1159
+ "FDA_get_dosage_and_storage_information_by_drug_name",
1160
+ "FDA_get_dosage_forms_and_strengths_by_drug_name",
1161
+ "FDA_get_drug_generic_name",
1162
+ "FDA_get_drug_interactions_by_drug_name",
1163
+ "FDA_get_drug_name_by_SPL_ID",
1164
+ "FDA_get_drug_name_by_adverse_reaction",
1165
+ "FDA_get_drug_name_by_calibration_instructions",
1166
+ "FDA_get_drug_name_by_dependence_info",
1167
+ "FDA_get_drug_name_by_document_id",
1168
+ "FDA_get_drug_name_by_dosage_info",
1169
+ "FDA_get_drug_name_by_environmental_warning",
1170
+ "FDA_get_drug_name_by_inactive_ingredient",
1171
+ "FDA_get_drug_name_by_info_on_conditions_for_doctor_consultation",
1172
+ "FDA_get_drug_name_by_labor_and_delivery_info",
1173
+ "FDA_get_drug_name_by_microbiology",
1174
+ "FDA_get_drug_name_by_other_safety_info",
1175
+ "FDA_get_drug_name_by_pharmacodynamics",
1176
+ "FDA_get_drug_name_by_pharmacogenomics",
1177
+ "FDA_get_drug_name_by_precautions",
1178
+ "FDA_get_drug_name_by_pregnancy_or_breastfeeding_info",
1179
+ "FDA_get_drug_name_by_principal_display_panel",
1180
+ "FDA_get_drug_name_by_reference",
1181
+ "FDA_get_drug_name_by_set_id",
1182
+ "FDA_get_drug_name_by_stop_use_info",
1183
+ "FDA_get_drug_name_by_storage_and_handling_info",
1184
+ "FDA_get_drug_name_by_warnings",
1185
+ "FDA_get_drug_name_from_patient_package_insert",
1186
+ "FDA_get_drug_names_by_abuse_dependence_info",
1187
+ "FDA_get_drug_names_by_abuse_info",
1188
+ "FDA_get_drug_names_by_accessories",
1189
+ "FDA_get_drug_names_by_active_ingredient",
1190
+ "FDA_get_drug_names_by_alarm",
1191
+ "FDA_get_drug_names_by_animal_pharmacology_info",
1192
+ "FDA_get_drug_names_by_application_number_NDC_number",
1193
+ "FDA_get_drug_names_by_assembly_installation_info",
1194
+ "FDA_get_drug_names_by_boxed_warning",
1195
+ "FDA_get_drug_names_by_child_safety_info",
1196
+ "FDA_get_drug_names_by_clinical_pharmacology",
1197
+ "FDA_get_drug_names_by_clinical_studies",
1198
+ "FDA_get_drug_names_by_consulting_doctor_pharmacist_info",
1199
+ "FDA_get_drug_names_by_contraindications",
1200
+ "FDA_get_drug_names_by_controlled_substance_DEA_schedule",
1201
+ "FDA_get_drug_names_by_dear_health_care_provider_letter_info",
1202
+ "FDA_get_drug_names_by_disposal_info",
1203
+ "FDA_get_drug_names_by_dosage_forms_and_strengths_info",
1204
+ "FDA_get_drug_names_by_drug_interactions",
1205
+ "FDA_get_drug_names_by_effective_time",
1206
+ "FDA_get_drug_names_by_food_safety_warnings",
1207
+ "FDA_get_drug_names_by_general_precautions",
1208
+ "FDA_get_drug_names_by_geriatric_use",
1209
+ "FDA_get_drug_names_by_health_claim",
1210
+ "FDA_get_drug_names_by_indication",
1211
+ "FDA_get_drug_names_by_info_for_nursing_mothers",
1212
+ "FDA_get_drug_names_by_information_for_owners_or_caregivers",
1213
+ "FDA_get_drug_names_by_ingredient",
1214
+ "FDA_get_drug_names_by_instructions_for_use",
1215
+ "FDA_get_drug_names_by_lab_test_interference",
1216
+ "FDA_get_drug_names_by_lab_tests",
1217
+ "FDA_get_drug_names_by_mechanism_of_action",
1218
+ "FDA_get_drug_names_by_medication_guide",
1219
+ "FDA_get_drug_names_by_nonclinical_toxicology_info",
1220
+ "FDA_get_drug_names_by_nonteratogenic_effects",
1221
+ "FDA_get_drug_names_by_overdosage_info",
1222
+ "FDA_get_drug_names_by_pediatric_use",
1223
+ "FDA_get_drug_names_by_pharmacokinetics",
1224
+ "FDA_get_drug_names_by_population_use",
1225
+ "FDA_get_drug_names_by_pregnancy_effects_info",
1226
+ "FDA_get_drug_names_by_residue_warning",
1227
+ "FDA_get_drug_names_by_risk",
1228
+ "FDA_get_drug_names_by_route",
1229
+ "FDA_get_drug_names_by_safe_handling_warning",
1230
+ "FDA_get_drug_names_by_safety_summary",
1231
+ "FDA_get_drug_names_by_spl_indexing_data_elements",
1232
+ "FDA_get_drug_names_by_teratogenic_effects",
1233
+ "FDA_get_drug_names_by_user_safety_warning",
1234
+ "FDA_get_drug_names_by_warnings_and_cautions",
1235
+ "FDA_get_drugs_by_carcinogenic_mutagenic_fertility",
1236
+ "FDA_get_effective_time_by_drug_name",
1237
+ "FDA_get_environmental_warning_by_drug_name",
1238
+ "FDA_get_general_precautions_by_drug_name",
1239
+ "FDA_get_geriatric_use_info_by_drug_name",
1240
+ "FDA_get_health_claims_by_drug_name",
1241
+ "FDA_get_inactive_ingredient_info_by_drug_name",
1242
+ "FDA_get_indications_by_drug_name",
1243
+ "FDA_get_info_for_nursing_mothers_by_drug_name",
1244
+ "FDA_get_info_for_patients_by_drug_name",
1245
+ "FDA_get_info_on_conditions_for_doctor_consultation_by_drug_name",
1246
+ "FDA_get_info_on_consulting_doctor_pharmacist_by_drug_name",
1247
+ "FDA_get_information_for_owners_or_caregivers_by_drug_name",
1248
+ "FDA_get_ingredients_by_drug_name",
1249
+ "FDA_get_instructions_for_use_by_drug_name",
1250
+ "FDA_get_lab_test_interference_info_by_drug_name",
1251
+ "FDA_get_lab_tests_by_drug_name",
1252
+ "FDA_get_labor_and_delivery_info_by_drug_name",
1253
+ "FDA_get_manufacturer_name_NDC_number_by_drug_name",
1254
+ "FDA_get_mechanism_of_action_by_drug_name",
1255
+ "FDA_get_medication_guide_info_by_drug_name",
1256
+ "FDA_get_microbiology_info_by_drug_name",
1257
+ "FDA_get_nonclinical_toxicology_info_by_drug_name",
1258
+ "FDA_get_nonteratogenic_effects_by_drug_name",
1259
+ "FDA_get_other_safety_info_by_drug_name",
1260
+ "FDA_get_overdosage_info_by_drug_name",
1261
+ "FDA_get_patient_package_insert_from_drug_name",
1262
+ "FDA_get_pediatric_use_info_by_drug_name",
1263
+ "FDA_get_pharmacodynamics_by_drug_name",
1264
+ "FDA_get_pharmacogenomics_info_by_drug_name",
1265
+ "FDA_get_pharmacokinetics_by_drug_name",
1266
+ "FDA_get_population_use_info_by_drug_name",
1267
+ "FDA_get_precautions_by_drug_name",
1268
+ "FDA_get_pregnancy_effects_info_by_drug_name",
1269
+ "FDA_get_pregnancy_or_breastfeeding_info_by_drug_name",
1270
+ "FDA_get_principal_display_panel_by_drug_name",
1271
+ "FDA_get_purpose_info_by_drug_name",
1272
+ "FDA_get_recent_changes_by_drug_name",
1273
+ "FDA_get_reference_info_by_drug_name",
1274
+ "FDA_get_residue_warning_by_drug_name",
1275
+ "FDA_get_risk_info_by_drug_name",
1276
+ "FDA_get_route_info_by_drug_name",
1277
+ "FDA_get_safe_handling_warnings_by_drug_name",
1278
+ "FDA_get_safety_summary_by_drug_name",
1279
+ "FDA_get_spl_indexing_data_elements_by_drug_name",
1280
+ "FDA_get_spl_unclassified_section_by_drug_name",
1281
+ "FDA_get_stop_use_info_by_drug_name",
1282
+ "FDA_get_storage_and_handling_info_by_drug_name",
1283
+ "FDA_get_teratogenic_effects_by_drug_name",
1284
+ "FDA_get_user_safety_warning_by_drug_names",
1285
+ "FDA_get_warnings_and_cautions_by_drug_name",
1286
+ "FDA_get_warnings_by_drug_name",
1287
+ "FDA_get_when_using_info",
1288
+ "FDA_retrieve_device_use_by_drug_name",
1289
+ "FDA_retrieve_drug_name_by_device_use",
1290
+ "FDA_retrieve_drug_names_by_patient_medication_info",
1291
+ "FDA_retrieve_patient_medication_info_by_drug_name",
1292
+ "Fatcat_search_scholar",
1293
+ "Finish",
1294
+ "GO_get_annotations_for_gene",
1295
+ "GO_get_genes_for_term",
1296
+ "GO_get_term_by_id",
1297
+ "GO_get_term_details",
1298
+ "GO_search_terms",
1299
+ "HAL_search_archive",
1300
+ "HPA_get_biological_processes_by_gene",
1301
+ "HPA_get_cancer_prognostics_by_gene",
1302
+ "HPA_get_comparative_expression_by_gene_and_cellline",
1303
+ "HPA_get_comprehensive_gene_details_by_ensembl_id",
1304
+ "HPA_get_contextual_biological_process_analysis",
1305
+ "HPA_get_disease_expression_by_gene_tissue_disease",
1306
+ "HPA_get_gene_basic_info_by_ensembl_id",
1307
+ "HPA_get_gene_tsv_data_by_ensembl_id",
1308
+ "HPA_get_protein_interactions_by_gene",
1309
+ "HPA_get_rna_expression_by_source",
1310
+ "HPA_get_rna_expression_in_specific_tissues",
1311
+ "HPA_get_subcellular_location",
1312
+ "HPA_search_genes_by_query",
1313
+ "HypothesisGenerator",
1314
+ "LabelGenerator",
1315
+ "LiteratureContextReviewer",
1316
+ "LiteratureSearchTool",
1317
+ "MedRxiv_search_preprints",
1318
+ "MedicalLiteratureReviewer",
1319
+ "MedicalTermNormalizer",
1320
+ "MedlinePlus_connect_lookup_by_code",
1321
+ "MedlinePlus_get_genetics_condition_by_name",
1322
+ "MedlinePlus_get_genetics_gene_by_name",
1323
+ "MedlinePlus_get_genetics_index",
1324
+ "MedlinePlus_search_topics_by_keyword",
1325
+ "MethodologyRigorReviewer",
1326
+ "MultiAgentLiteratureSearch",
1327
+ "NICE_Clinical_Guidelines_Search",
1328
+ "NICE_Guideline_Full_Text",
1329
+ "NoveltySignificanceReviewer",
1330
+ "OSF_search_preprints",
1331
+ "OSL_get_efo_id_by_disease_name",
1332
+ "OpenAIRE_search_publications",
1333
+ "OpenAlex_Guidelines_Search",
1334
+ "OpenTargets_drug_pharmacogenomics_data",
1335
+ "OpenTargets_get_approved_indications_by_drug_chemblId",
1336
+ "OpenTargets_get_associated_diseases_by_drug_chemblId",
1337
+ "OpenTargets_get_associated_drugs_by_disease_efoId",
1338
+ "OpenTargets_get_associated_drugs_by_target_ensemblID",
1339
+ "OpenTargets_get_associated_phenotypes_by_disease_efoId",
1340
+ "OpenTargets_get_associated_targets_by_disease_efoId",
1341
+ "OpenTargets_get_associated_targets_by_drug_chemblId",
1342
+ "OpenTargets_get_biological_mouse_models_by_ensemblID",
1343
+ "OpenTargets_get_chemical_probes_by_target_ensemblID",
1344
+ "OpenTargets_get_disease_ancestors_parents_by_efoId",
1345
+ "OpenTargets_get_disease_descendants_children_by_efoId",
1346
+ "OpenTargets_get_disease_description_by_efoId",
1347
+ "OpenTargets_get_disease_id_description_by_name",
1348
+ "OpenTargets_get_disease_ids_by_efoId",
1349
+ "OpenTargets_get_disease_ids_by_name",
1350
+ "OpenTargets_get_disease_locations_by_efoId",
1351
+ "OpenTargets_get_disease_synonyms_by_efoId",
1352
+ "OpenTargets_get_disease_therapeutic_areas_by_efoId",
1353
+ "OpenTargets_get_diseases_phenotypes_by_target_ensembl",
1354
+ "OpenTargets_get_drug_adverse_events_by_chemblId",
1355
+ "OpenTargets_get_drug_approval_status_by_chemblId",
1356
+ "OpenTargets_get_drug_chembId_by_generic_name",
1357
+ "OpenTargets_get_drug_description_by_chemblId",
1358
+ "OpenTargets_get_drug_id_description_by_name",
1359
+ "OpenTargets_get_drug_indications_by_chemblId",
1360
+ "OpenTargets_get_drug_mechanisms_of_action_by_chemblId",
1361
+ "OpenTargets_get_drug_synonyms_by_chemblId",
1362
+ "OpenTargets_get_drug_trade_names_by_chemblId",
1363
+ "OpenTargets_get_drug_warnings_by_chemblId",
1364
+ "OpenTargets_get_drug_withdrawn_blackbox_status_by_chemblId",
1365
+ "OpenTargets_get_gene_ontology_terms_by_goID",
1366
+ "OpenTargets_get_known_drugs_by_drug_chemblId",
1367
+ "OpenTargets_get_parent_child_molecules_by_drug_chembl_ID",
1368
+ "OpenTargets_get_publications_by_disease_efoId",
1369
+ "OpenTargets_get_publications_by_drug_chemblId",
1370
+ "OpenTargets_get_publications_by_target_ensemblID",
1371
+ "OpenTargets_get_similar_entities_by_disease_efoId",
1372
+ "OpenTargets_get_similar_entities_by_drug_chemblId",
1373
+ "OpenTargets_get_similar_entities_by_target_ensemblID",
1374
+ "OpenTargets_get_target_classes_by_ensemblID",
1375
+ "OpenTargets_get_target_constraint_info_by_ensemblID",
1376
+ "OpenTargets_get_target_enabling_packages_by_ensemblID",
1377
+ "OpenTargets_get_target_gene_ontology_by_ensemblID",
1378
+ "OpenTargets_get_target_genomic_location_by_ensemblID",
1379
+ "OpenTargets_get_target_homologues_by_ensemblID",
1380
+ "OpenTargets_get_target_id_description_by_name",
1381
+ "OpenTargets_get_target_interactions_by_ensemblID",
1382
+ "OpenTargets_get_target_safety_profile_by_ensemblID",
1383
+ "OpenTargets_get_target_subcellular_locations_by_ensemblID",
1384
+ "OpenTargets_get_target_synonyms_by_ensemblID",
1385
+ "OpenTargets_get_target_tractability_by_ensemblID",
1386
+ "OpenTargets_map_any_disease_id_to_all_other_ids",
1387
+ "OpenTargets_multi_entity_search_by_query_string",
1388
+ "OpenTargets_search_category_counts_by_query_string",
1389
+ "OpenTargets_target_disease_evidence",
1390
+ "OutputSummarizationComposer",
1391
+ "PMC_search_papers",
1392
+ "ProtocolOptimizer",
1393
+ "PubChem_get_CID_by_SMILES",
1394
+ "PubChem_get_CID_by_compound_name",
1395
+ "PubChem_get_associated_patents_by_CID",
1396
+ "PubChem_get_compound_2D_image_by_CID",
1397
+ "PubChem_get_compound_properties_by_CID",
1398
+ "PubChem_get_compound_synonyms_by_CID",
1399
+ "PubChem_get_compound_xrefs_by_CID",
1400
+ "PubChem_search_compounds_by_similarity",
1401
+ "PubChem_search_compounds_by_substructure",
1402
+ "PubMed_Guidelines_Search",
1403
+ "PubMed_search_articles",
1404
+ "PubTator3_EntityAutocomplete",
1405
+ "PubTator3_LiteratureSearch",
1406
+ "QuestionRephraser",
1407
+ "Reactome_get_pathway_reactions",
1408
+ "ReproducibilityTransparencyReviewer",
1409
+ "ResultsInterpretationReviewer",
1410
+ "ScientificTextSummarizer",
1411
+ "SemanticScholar_search_papers",
1412
+ "TRIP_Database_Guidelines_Search",
1413
+ "TestCaseGenerator",
1414
+ "ToolCompatibilityAnalyzer",
1415
+ "ToolDescriptionOptimizer",
1416
+ "ToolDiscover",
1417
+ "ToolGraphComposer",
1418
+ "ToolGraphGenerationPipeline",
1419
+ "ToolImplementationGenerator",
1420
+ "ToolMetadataGenerationPipeline",
1421
+ "ToolMetadataGenerator",
1422
+ "ToolMetadataStandardizer",
1423
+ "ToolOptimizer",
1424
+ "ToolOutputSummarizer",
1425
+ "ToolQualityEvaluator",
1426
+ "ToolRelationshipDetector",
1427
+ "ToolSpecificationGenerator",
1428
+ "ToolSpecificationOptimizer",
1429
+ "Tool_Finder",
1430
+ "Tool_Finder_Keyword",
1431
+ "Tool_Finder_LLM",
1432
+ "Tool_RAG",
1433
+ "UniProt_get_alternative_names_by_accession",
1434
+ "UniProt_get_disease_variants_by_accession",
1435
+ "UniProt_get_entry_by_accession",
1436
+ "UniProt_get_function_by_accession",
1437
+ "UniProt_get_isoform_ids_by_accession",
1438
+ "UniProt_get_organism_by_accession",
1439
+ "UniProt_get_ptm_processing_by_accession",
1440
+ "UniProt_get_recommended_name_by_accession",
1441
+ "UniProt_get_sequence_by_accession",
1442
+ "UniProt_get_subcellular_location_by_accession",
1443
+ "Unpaywall_check_oa_status",
1444
+ "WHO_Guideline_Full_Text",
1445
+ "WHO_Guidelines_Search",
1446
+ "Wikidata_SPARQL_query",
1447
+ "WritingPresentationReviewer",
1448
+ "Zenodo_search_records",
1449
+ "alphafold_get_annotations",
1450
+ "alphafold_get_prediction",
1451
+ "alphafold_get_summary",
1452
+ "call_agentic_human",
1453
+ "cancer_biomarkers_disease_target_score",
1454
+ "cancer_gene_census_disease_target_score",
1455
+ "cellosaurus_get_cell_line_info",
1456
+ "cellosaurus_query_converter",
1457
+ "cellosaurus_search_cell_lines",
1458
+ "chembl_disease_target_score",
1459
+ "dict_search",
1460
+ "dili_search",
1461
+ "diqt_search",
1462
+ "disease_target_score",
1463
+ "drugbank_filter_drugs_by_name",
1464
+ "drugbank_full_search",
1465
+ "drugbank_get_drug_basic_info_by_drug_name_or_drugbank_id",
1466
+ "drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id",
1467
+ "drugbank_get_drug_interactions_by_drug_name_or_drugbank_id",
1468
+ "drugbank_get_drug_name_and_description_by_indication",
1469
+ "drugbank_get_drug_name_and_description_by_pathway_name",
1470
+ "drugbank_get_drug_name_and_description_by_target_name",
1471
+ "drugbank_get_drug_name_description_pharmacology_by_mechanism_of_action",
1472
+ "drugbank_get_drug_pathways_and_reactions_by_drug_name_or_drugbank_id",
1473
+ "drugbank_get_drug_products_by_name_or_drugbank_id",
1474
+ "drugbank_get_drug_references_by_drug_name_or_drugbank_id",
1475
+ "drugbank_get_indications_by_drug_name_or_drugbank_id",
1476
+ "drugbank_get_pharmacology_by_drug_name_or_drugbank_id",
1477
+ "drugbank_get_safety_by_drug_name_or_drugbank_id",
1478
+ "drugbank_get_targets_by_drug_name_or_drugbank_id",
1479
+ "drugbank_links_search",
1480
+ "drugbank_vocab_filter",
1481
+ "drugbank_vocab_search",
1482
+ "embedding_database_add",
1483
+ "embedding_database_create",
1484
+ "embedding_database_load",
1485
+ "embedding_database_search",
1486
+ "embedding_sync_download",
1487
+ "embedding_sync_upload",
1488
+ "enrichr_gene_enrichment_analysis",
1489
+ "europepmc_disease_target_score",
1490
+ "eva_disease_target_score",
1491
+ "eva_somatic_disease_target_score",
1492
+ "expression_atlas_disease_target_score",
1493
+ "extract_clinical_trial_adverse_events",
1494
+ "extract_clinical_trial_outcomes",
1495
+ "genomics_england_disease_target_score",
1496
+ "get_HPO_ID_by_phenotype",
1497
+ "get_albumentations_info",
1498
+ "get_altair_info",
1499
+ "get_anndata_info",
1500
+ "get_arboreto_info",
1501
+ "get_arxiv_info",
1502
+ "get_ase_info",
1503
+ "get_assembly_info_by_pdb_id",
1504
+ "get_assembly_summary",
1505
+ "get_astropy_info",
1506
+ "get_binding_affinity_by_pdb_id",
1507
+ "get_biopandas_info",
1508
+ "get_biopython_info",
1509
+ "get_bioservices_info",
1510
+ "get_biotite_info",
1511
+ "get_bokeh_info",
1512
+ "get_brian2_info",
1513
+ "get_cartopy_info",
1514
+ "get_catboost_info",
1515
+ "get_cellpose_info",
1516
+ "get_cellrank_info",
1517
+ "get_cellxgene_census_info",
1518
+ "get_cftime_info",
1519
+ "get_chem_comp_audit_info",
1520
+ "get_chem_comp_charge_and_ambiguity",
1521
+ "get_chembl_webresource_client_info",
1522
+ "get_citation_info_by_pdb_id",
1523
+ "get_clair3_info",
1524
+ "get_clinical_trial_conditions_and_interventions",
1525
+ "get_clinical_trial_descriptions",
1526
+ "get_clinical_trial_eligibility_criteria",
1527
+ "get_clinical_trial_locations",
1528
+ "get_clinical_trial_outcome_measures",
1529
+ "get_clinical_trial_references",
1530
+ "get_clinical_trial_status_and_dates",
1531
+ "get_cobra_info",
1532
+ "get_cobrapy_info",
1533
+ "get_cooler_info",
1534
+ "get_core_refinement_statistics",
1535
+ "get_cryosparc_tools_info",
1536
+ "get_crystal_growth_conditions_by_pdb_id",
1537
+ "get_crystallization_ph_by_pdb_id",
1538
+ "get_crystallographic_properties_by_pdb_id",
1539
+ "get_cupy_info",
1540
+ "get_cyvcf2_info",
1541
+ "get_dask_info",
1542
+ "get_datamol_info",
1543
+ "get_datashader_info",
1544
+ "get_deepchem_info",
1545
+ "get_deeppurpose_info",
1546
+ "get_deeptools_info",
1547
+ "get_deepxde_info",
1548
+ "get_dendropy_info",
1549
+ "get_descriptastorus_info",
1550
+ "get_diffdock_info",
1551
+ "get_dscribe_info",
1552
+ "get_ec_number_by_entity_id",
1553
+ "get_elephant_info",
1554
+ "get_em_3d_fitting_and_reconstruction_details",
1555
+ "get_emdb_ids_by_pdb_id",
1556
+ "get_episcanpy_info",
1557
+ "get_ete3_info",
1558
+ "get_faiss_info",
1559
+ "get_fanc_info",
1560
+ "get_flask_info",
1561
+ "get_flowio_info",
1562
+ "get_flowkit_info",
1563
+ "get_flowutils_info",
1564
+ "get_freesasa_info",
1565
+ "get_galpy_info",
1566
+ "get_gene_name_by_entity_id",
1567
+ "get_geopandas_info",
1568
+ "get_gget_info",
1569
+ "get_googlesearch_python_info",
1570
+ "get_gseapy_info",
1571
+ "get_h5py_info",
1572
+ "get_harmony_pytorch_info",
1573
+ "get_hmmlearn_info",
1574
+ "get_holoviews_info",
1575
+ "get_host_organism_by_pdb_id",
1576
+ "get_htmd_info",
1577
+ "get_hyperopt_info",
1578
+ "get_igraph_info",
1579
+ "get_imageio_info",
1580
+ "get_imbalanced_learn_info",
1581
+ "get_jcvi_info",
1582
+ "get_joblib_info",
1583
+ "get_joint_associated_diseases_by_HPO_ID_list",
1584
+ "get_khmer_info",
1585
+ "get_kipoiseq_info",
1586
+ "get_lifelines_info",
1587
+ "get_ligand_bond_count_by_pdb_id",
1588
+ "get_ligand_smiles_by_chem_comp_id",
1589
+ "get_lightgbm_info",
1590
+ "get_loompy_info",
1591
+ "get_mageck_info",
1592
+ "get_matplotlib_info",
1593
+ "get_mdanalysis_info",
1594
+ "get_mdtraj_info",
1595
+ "get_mne_info",
1596
+ "get_molfeat_info",
1597
+ "get_molvs_info",
1598
+ "get_mordred_info",
1599
+ "get_msprime_info",
1600
+ "get_mudata_info",
1601
+ "get_mutation_annotations_by_pdb_id",
1602
+ "get_neo_info",
1603
+ "get_netcdf4_info",
1604
+ "get_networkx_info",
1605
+ "get_nglview_info",
1606
+ "get_nilearn_info",
1607
+ "get_numba_info",
1608
+ "get_numpy_info",
1609
+ "get_oligosaccharide_descriptors_by_entity_id",
1610
+ "get_openbabel_info",
1611
+ "get_openchem_info",
1612
+ "get_opencv_info",
1613
+ "get_openmm_info",
1614
+ "get_optlang_info",
1615
+ "get_optuna_info",
1616
+ "get_palantir_info",
1617
+ "get_pandas_info",
1618
+ "get_patsy_info",
1619
+ "get_pdbfixer_info",
1620
+ "get_phenotype_by_HPO_ID",
1621
+ "get_pillow_info",
1622
+ "get_plantcv_info",
1623
+ "get_plip_info",
1624
+ "get_plotly_info",
1625
+ "get_poliastro_info",
1626
+ "get_polymer_entity_annotations",
1627
+ "get_polymer_entity_count_by_pdb_id",
1628
+ "get_polymer_entity_ids_by_pdb_id",
1629
+ "get_polymer_entity_type_by_entity_id",
1630
+ "get_polymer_molecular_weight_by_entity_id",
1631
+ "get_poretools_info",
1632
+ "get_prody_info",
1633
+ "get_protein_classification_by_pdb_id",
1634
+ "get_protein_metadata_by_pdb_id",
1635
+ "get_pubchempy_info",
1636
+ "get_pybedtools_info",
1637
+ "get_pybigwig_info",
1638
+ "get_pydeseq2_info",
1639
+ "get_pyensembl_info",
1640
+ "get_pyephem_info",
1641
+ "get_pyfaidx_info",
1642
+ "get_pyfasta_info",
1643
+ "get_pykalman_info",
1644
+ "get_pyliftover_info",
1645
+ "get_pymassspec_info",
1646
+ "get_pymed_info",
1647
+ "get_pymzml_info",
1648
+ "get_pypdf2_info",
1649
+ "get_pyranges_info",
1650
+ "get_pyrosetta_info",
1651
+ "get_pysam_info",
1652
+ "get_pyscenic_info",
1653
+ "get_pyscf_info",
1654
+ "get_pyscreener_info",
1655
+ "get_pytdc_info",
1656
+ "get_python_libsbml_info",
1657
+ "get_pytorch_info",
1658
+ "get_pyvcf_info",
1659
+ "get_pyvis_info",
1660
+ "get_qutip_info",
1661
+ "get_rasterio_info",
1662
+ "get_rdkit_info",
1663
+ "get_refinement_resolution_by_pdb_id",
1664
+ "get_release_deposit_dates_by_pdb_id",
1665
+ "get_reportlab_info",
1666
+ "get_requests_info",
1667
+ "get_ruptures_info",
1668
+ "get_scanorama_info",
1669
+ "get_scanpy_info",
1670
+ "get_schnetpack_info",
1671
+ "get_scholarly_info",
1672
+ "get_scikit_bio_info",
1673
+ "get_scikit_image_info",
1674
+ "get_scikit_learn_info",
1675
+ "get_scipy_info",
1676
+ "get_scrublet_info",
1677
+ "get_scvelo_info",
1678
+ "get_scvi_tools_info",
1679
+ "get_seaborn_info",
1680
+ "get_sequence_by_pdb_id",
1681
+ "get_sequence_lengths_by_pdb_id",
1682
+ "get_sequence_positional_features_by_instance_id",
1683
+ "get_skopt_info",
1684
+ "get_souporcell_info",
1685
+ "get_source_organism_by_pdb_id",
1686
+ "get_space_group_by_pdb_id",
1687
+ "get_statsmodels_info",
1688
+ "get_structure_determination_software_by_pdb_id",
1689
+ "get_structure_title_by_pdb_id",
1690
+ "get_structure_validation_metrics_by_pdb_id",
1691
+ "get_sunpy_info",
1692
+ "get_sympy_info",
1693
+ "get_target_cofactor_info",
1694
+ "get_taxonomy_by_pdb_id",
1695
+ "get_tiledb_info",
1696
+ "get_tiledbsoma_info",
1697
+ "get_torch_geometric_info",
1698
+ "get_tqdm_info",
1699
+ "get_trackpy_info",
1700
+ "get_tskit_info",
1701
+ "get_umap_learn_info",
1702
+ "get_uniprot_accession_by_entity_id",
1703
+ "get_velocyto_info",
1704
+ "get_viennarna_info",
1705
+ "get_webpage_text_from_url",
1706
+ "get_webpage_title",
1707
+ "get_xarray_info",
1708
+ "get_xesmf_info",
1709
+ "get_xgboost_info",
1710
+ "get_zarr_info",
1711
+ "gwas_get_association_by_id",
1712
+ "gwas_get_associations_for_snp",
1713
+ "gwas_get_associations_for_study",
1714
+ "gwas_get_associations_for_trait",
1715
+ "gwas_get_snp_by_id",
1716
+ "gwas_get_snps_for_gene",
1717
+ "gwas_get_studies_for_trait",
1718
+ "gwas_get_study_by_id",
1719
+ "gwas_get_variants_for_trait",
1720
+ "gwas_search_associations",
1721
+ "gwas_search_snps",
1722
+ "gwas_search_studies",
1723
+ "humanbase_ppi_analysis",
1724
+ "mesh_get_subjects_by_pharmacological_action",
1725
+ "mesh_get_subjects_by_subject_id",
1726
+ "mesh_get_subjects_by_subject_name",
1727
+ "mesh_get_subjects_by_subject_scope_or_definition",
1728
+ "odphp_itemlist",
1729
+ "odphp_myhealthfinder",
1730
+ "odphp_outlink_fetch",
1731
+ "odphp_topicsearch",
1732
+ "openalex_literature_search",
1733
+ "reactome_disease_target_score",
1734
+ "search_clinical_trials",
1735
+ "visualize_molecule_2d",
1736
+ "visualize_molecule_3d",
1737
+ "visualize_protein_structure_3d",
1738
+ ]