spacr 0.0.1__py3-none-any.whl → 0.0.6__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- spacr/__init__.py +6 -2
- spacr/__main__.py +0 -2
- spacr/alpha.py +807 -0
- spacr/annotate_app.py +118 -120
- spacr/chris.py +50 -0
- spacr/cli.py +25 -187
- spacr/core.py +1611 -389
- spacr/deep_spacr.py +696 -0
- spacr/foldseek.py +779 -0
- spacr/get_alfafold_structures.py +72 -0
- spacr/graph_learning.py +320 -0
- spacr/graph_learning_lap.py +84 -0
- spacr/gui.py +145 -0
- spacr/gui_2.py +90 -0
- spacr/gui_classify_app.py +187 -0
- spacr/gui_mask_app.py +149 -174
- spacr/gui_measure_app.py +116 -109
- spacr/gui_sim_app.py +0 -0
- spacr/gui_utils.py +679 -139
- spacr/io.py +620 -469
- spacr/mask_app.py +116 -9
- spacr/measure.py +178 -84
- spacr/models/cp/toxo_pv_lumen.CP_model +0 -0
- spacr/old_code.py +255 -1
- spacr/plot.py +263 -100
- spacr/sequencing.py +1130 -0
- spacr/sim.py +634 -122
- spacr/timelapse.py +343 -53
- spacr/train.py +195 -22
- spacr/umap.py +0 -689
- spacr/utils.py +1530 -188
- spacr-0.0.6.dist-info/METADATA +118 -0
- spacr-0.0.6.dist-info/RECORD +39 -0
- {spacr-0.0.1.dist-info → spacr-0.0.6.dist-info}/WHEEL +1 -1
- spacr-0.0.6.dist-info/entry_points.txt +9 -0
- spacr-0.0.1.dist-info/METADATA +0 -64
- spacr-0.0.1.dist-info/RECORD +0 -26
- spacr-0.0.1.dist-info/entry_points.txt +0 -5
- {spacr-0.0.1.dist-info → spacr-0.0.6.dist-info}/LICENSE +0 -0
- {spacr-0.0.1.dist-info → spacr-0.0.6.dist-info}/top_level.txt +0 -0
spacr/__init__.py
CHANGED
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@@ -8,12 +8,14 @@ from . import plot
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from . import measure
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from . import sim
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from . import timelapse
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from . import
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from . import deep_spacr
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from . import mask_app
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from . import annotate_app
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from . import graph_learning
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from . import gui_utils
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from . import gui_mask_app
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from . import gui_measure_app
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from . import gui_classify_app
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from . import logger
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__all__ = [
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@@ -24,12 +26,14 @@ __all__ = [
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"measure",
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"sim",
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"timelapse",
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"
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"deep_spacr",
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"annotate_app",
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"graph_learning",
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"gui_utils",
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"mask_app",
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"gui_mask_app",
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"gui_measure_app",
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"gui_classify_app",
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"logger"
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]
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