snappy 3.1.1__cp312-cp312-macosx_11_0_arm64.whl → 3.2__cp312-cp312-macosx_11_0_arm64.whl

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Files changed (461) hide show
  1. snappy/CyOpenGL.cpython-312-darwin.so +0 -0
  2. snappy/SnapPy.cpython-312-darwin.so +0 -0
  3. snappy/SnapPyHP.cpython-312-darwin.so +0 -0
  4. snappy/__init__.py +271 -401
  5. snappy/app.py +70 -20
  6. snappy/browser.py +18 -17
  7. snappy/canonical.py +249 -0
  8. snappy/{verify/cusp_shapes.py → cusps/__init__.py} +8 -18
  9. snappy/cusps/cusp_area_matrix.py +101 -0
  10. snappy/{verify/cusp_areas.py → cusps/cusp_areas_from_matrix.py} +23 -39
  11. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  12. snappy/cusps/test.py +21 -0
  13. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  14. snappy/database.py +10 -9
  15. snappy/decorated_isosig.py +337 -114
  16. snappy/dev/extended_ptolemy/complexVolumesClosed.py +40 -7
  17. snappy/dev/extended_ptolemy/extended.py +3 -3
  18. snappy/dev/extended_ptolemy/phc_wrapper.py +10 -10
  19. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +1 -1
  20. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  21. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  22. snappy/doc/_images/o9_00000_systole_paper_plane.jpg +0 -0
  23. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  24. snappy/doc/_sources/development.rst.txt +66 -46
  25. snappy/doc/_sources/index.rst.txt +72 -5
  26. snappy/doc/_sources/installing.rst.txt +145 -162
  27. snappy/doc/_sources/news.rst.txt +73 -1
  28. snappy/doc/_sources/ptolemy_examples1.rst.txt +8 -7
  29. snappy/doc/_sources/ptolemy_examples3.rst.txt +2 -2
  30. snappy/doc/_sources/triangulation.rst.txt +2 -2
  31. snappy/doc/_sources/verify.rst.txt +89 -29
  32. snappy/doc/_sources/verify_internals.rst.txt +5 -16
  33. snappy/doc/_static/basic.css +1 -1
  34. snappy/doc/_static/css/badge_only.css +1 -1
  35. snappy/doc/_static/css/theme.css +1 -1
  36. snappy/doc/_static/doctools.js +1 -1
  37. snappy/doc/_static/documentation_options.js +1 -1
  38. snappy/doc/_static/fonts/Lato/lato-bold.eot +0 -0
  39. snappy/doc/_static/fonts/Lato/lato-bold.ttf +0 -0
  40. snappy/doc/_static/fonts/Lato/lato-bold.woff +0 -0
  41. snappy/doc/_static/fonts/Lato/lato-bold.woff2 +0 -0
  42. snappy/doc/_static/fonts/Lato/lato-bolditalic.eot +0 -0
  43. snappy/doc/_static/fonts/Lato/lato-bolditalic.ttf +0 -0
  44. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff +0 -0
  45. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff2 +0 -0
  46. snappy/doc/_static/fonts/Lato/lato-italic.eot +0 -0
  47. snappy/doc/_static/fonts/Lato/lato-italic.ttf +0 -0
  48. snappy/doc/_static/fonts/Lato/lato-italic.woff +0 -0
  49. snappy/doc/_static/fonts/Lato/lato-italic.woff2 +0 -0
  50. snappy/doc/_static/fonts/Lato/lato-regular.eot +0 -0
  51. snappy/doc/_static/fonts/Lato/lato-regular.ttf +0 -0
  52. snappy/doc/_static/fonts/Lato/lato-regular.woff +0 -0
  53. snappy/doc/_static/fonts/Lato/lato-regular.woff2 +0 -0
  54. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot +0 -0
  55. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf +0 -0
  56. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff +0 -0
  57. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2 +0 -0
  58. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot +0 -0
  59. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf +0 -0
  60. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff +0 -0
  61. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2 +0 -0
  62. snappy/doc/_static/js/versions.js +228 -0
  63. snappy/doc/_static/language_data.js +2 -2
  64. snappy/doc/_static/searchtools.js +108 -62
  65. snappy/doc/additional_classes.html +209 -40
  66. snappy/doc/bugs.html +16 -19
  67. snappy/doc/censuses.html +19 -38
  68. snappy/doc/credits.html +16 -19
  69. snappy/doc/development.html +84 -64
  70. snappy/doc/genindex.html +65 -144
  71. snappy/doc/index.html +81 -26
  72. snappy/doc/installing.html +158 -176
  73. snappy/doc/manifold.html +1119 -507
  74. snappy/doc/manifoldhp.html +16 -19
  75. snappy/doc/news.html +90 -32
  76. snappy/doc/objects.inv +0 -0
  77. snappy/doc/other.html +17 -19
  78. snappy/doc/platonic_census.html +16 -19
  79. snappy/doc/plink.html +16 -19
  80. snappy/doc/ptolemy.html +17 -19
  81. snappy/doc/ptolemy_classes.html +31 -34
  82. snappy/doc/ptolemy_examples1.html +23 -25
  83. snappy/doc/ptolemy_examples2.html +16 -19
  84. snappy/doc/ptolemy_examples3.html +18 -21
  85. snappy/doc/ptolemy_examples4.html +16 -19
  86. snappy/doc/ptolemy_prelim.html +17 -20
  87. snappy/doc/py-modindex.html +16 -19
  88. snappy/doc/screenshots.html +18 -20
  89. snappy/doc/search.html +15 -18
  90. snappy/doc/searchindex.js +1 -1
  91. snappy/doc/snap.html +16 -19
  92. snappy/doc/snappy.html +17 -19
  93. snappy/doc/spherogram.html +29 -32
  94. snappy/doc/todo.html +16 -19
  95. snappy/doc/triangulation.html +299 -190
  96. snappy/doc/tutorial.html +16 -19
  97. snappy/doc/verify.html +97 -43
  98. snappy/doc/verify_internals.html +59 -516
  99. snappy/drilling/__init__.py +153 -235
  100. snappy/drilling/barycentric.py +103 -0
  101. snappy/drilling/constants.py +0 -2
  102. snappy/drilling/crush.py +56 -130
  103. snappy/drilling/cusps.py +12 -6
  104. snappy/drilling/debug.py +2 -1
  105. snappy/drilling/exceptions.py +7 -40
  106. snappy/drilling/moves.py +302 -243
  107. snappy/drilling/perturb.py +63 -37
  108. snappy/drilling/shorten.py +36 -0
  109. snappy/drilling/subdivide.py +0 -5
  110. snappy/drilling/test.py +23 -0
  111. snappy/drilling/test_cases.py +126 -0
  112. snappy/drilling/tracing.py +9 -37
  113. snappy/exceptions.py +18 -5
  114. snappy/exterior_to_link/barycentric_geometry.py +2 -4
  115. snappy/exterior_to_link/main.py +8 -7
  116. snappy/exterior_to_link/mcomplex_with_link.py +2 -2
  117. snappy/exterior_to_link/rational_linear_algebra.py +1 -1
  118. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +1 -1
  119. snappy/exterior_to_link/test.py +21 -33
  120. snappy/geometric_structure/__init__.py +212 -0
  121. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  122. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  123. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  124. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  125. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  126. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  127. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  128. snappy/geometric_structure/geodesic/__init__.py +0 -0
  129. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  130. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  131. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  132. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  133. snappy/geometric_structure/geodesic/constants.py +6 -0
  134. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  135. snappy/{drilling → geometric_structure/geodesic}/fixed_points.py +34 -9
  136. snappy/{drilling/geodesic_info.py → geometric_structure/geodesic/geodesic_start_point_info.py} +139 -180
  137. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  138. snappy/geometric_structure/geodesic/line.py +30 -0
  139. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  140. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  141. snappy/geometric_structure/test.py +22 -0
  142. snappy/gui.py +23 -13
  143. snappy/horoviewer.py +7 -7
  144. snappy/hyperboloid/__init__.py +96 -31
  145. snappy/hyperboloid/distances.py +245 -0
  146. snappy/hyperboloid/horoball.py +19 -0
  147. snappy/hyperboloid/line.py +35 -0
  148. snappy/hyperboloid/point.py +9 -0
  149. snappy/hyperboloid/triangle.py +29 -0
  150. snappy/isometry_signature.py +382 -0
  151. snappy/len_spec/__init__.py +596 -0
  152. snappy/len_spec/geodesic_info.py +110 -0
  153. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  154. snappy/len_spec/geodesic_piece.py +143 -0
  155. snappy/len_spec/geometric_structure.py +182 -0
  156. snappy/len_spec/geometry.py +80 -0
  157. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  158. snappy/len_spec/spine.py +206 -0
  159. snappy/len_spec/test.py +24 -0
  160. snappy/len_spec/test_cases.py +69 -0
  161. snappy/len_spec/tile.py +275 -0
  162. snappy/len_spec/word.py +86 -0
  163. snappy/math_basics.py +39 -13
  164. snappy/matrix.py +52 -9
  165. snappy/number.py +12 -6
  166. snappy/numeric_output_checker.py +2 -3
  167. snappy/pari.py +6 -3
  168. snappy/polyviewer.py +8 -8
  169. snappy/ptolemy/__init__.py +1 -1
  170. snappy/ptolemy/component.py +2 -2
  171. snappy/ptolemy/coordinates.py +25 -25
  172. snappy/ptolemy/findLoops.py +9 -9
  173. snappy/ptolemy/manifoldMethods.py +27 -29
  174. snappy/ptolemy/polynomial.py +50 -57
  175. snappy/ptolemy/processFileBase.py +60 -0
  176. snappy/ptolemy/ptolemyVariety.py +109 -41
  177. snappy/ptolemy/reginaWrapper.py +4 -4
  178. snappy/ptolemy/rur.py +1 -1
  179. snappy/ptolemy/solutionsToPrimeIdealGroebnerBasis.py +9 -9
  180. snappy/ptolemy/test.py +99 -54
  181. snappy/ptolemy/utilities.py +1 -1
  182. snappy/raytracing/__init__.py +64 -0
  183. snappy/raytracing/additional_horospheres.py +64 -0
  184. snappy/raytracing/additional_len_spec_choices.py +63 -0
  185. snappy/raytracing/cohomology_fractal.py +0 -3
  186. snappy/raytracing/eyeball.py +123 -0
  187. snappy/raytracing/finite_raytracing_data.py +17 -17
  188. snappy/raytracing/finite_viewer.py +15 -15
  189. snappy/raytracing/geodesic_tube_info.py +93 -63
  190. snappy/raytracing/geodesics.py +94 -64
  191. snappy/raytracing/geodesics_window.py +56 -34
  192. snappy/raytracing/gui_utilities.py +21 -6
  193. snappy/raytracing/hyperboloid_navigation.py +29 -4
  194. snappy/raytracing/hyperboloid_utilities.py +73 -73
  195. snappy/raytracing/ideal_raytracing_data.py +121 -91
  196. snappy/raytracing/inside_viewer.py +199 -66
  197. snappy/raytracing/pack.py +22 -0
  198. snappy/raytracing/raytracing_data.py +37 -25
  199. snappy/raytracing/raytracing_view.py +70 -65
  200. snappy/raytracing/shaders/Eye.png +0 -0
  201. snappy/raytracing/shaders/NonGeometric.png +0 -0
  202. snappy/raytracing/shaders/__init__.py +39 -3
  203. snappy/raytracing/shaders/fragment.glsl +451 -133
  204. snappy/raytracing/test.py +29 -0
  205. snappy/raytracing/tooltip.py +146 -0
  206. snappy/raytracing/upper_halfspace_utilities.py +42 -9
  207. snappy/sage_helper.py +67 -134
  208. snappy/settings.py +90 -77
  209. snappy/shell.py +2 -0
  210. snappy/snap/character_varieties.py +2 -2
  211. snappy/snap/find_field.py +4 -3
  212. snappy/snap/fundamental_polyhedron.py +2 -2
  213. snappy/snap/kernel_structures.py +5 -1
  214. snappy/snap/nsagetools.py +9 -8
  215. snappy/snap/peripheral/dual_cellulation.py +4 -3
  216. snappy/snap/peripheral/peripheral.py +2 -2
  217. snappy/snap/peripheral/surface.py +5 -5
  218. snappy/snap/peripheral/test.py +1 -1
  219. snappy/snap/polished_reps.py +8 -8
  220. snappy/snap/slice_obs_HKL.py +16 -14
  221. snappy/snap/t3mlite/arrow.py +3 -3
  222. snappy/snap/t3mlite/edge.py +3 -3
  223. snappy/snap/t3mlite/homology.py +2 -2
  224. snappy/snap/t3mlite/mcomplex.py +3 -3
  225. snappy/snap/t3mlite/simplex.py +12 -0
  226. snappy/snap/t3mlite/spun.py +18 -17
  227. snappy/snap/t3mlite/test_vs_regina.py +4 -4
  228. snappy/snap/test.py +37 -53
  229. snappy/snap/utilities.py +4 -5
  230. snappy/test.py +121 -138
  231. snappy/test_cases.py +263 -0
  232. snappy/testing.py +131 -0
  233. snappy/tiling/__init__.py +2 -0
  234. snappy/tiling/canonical_key_dict.py +59 -0
  235. snappy/tiling/dict_based_set.py +79 -0
  236. snappy/tiling/floor.py +49 -0
  237. snappy/tiling/hyperboloid_dict.py +54 -0
  238. snappy/tiling/iter_utils.py +78 -0
  239. snappy/tiling/lifted_tetrahedron.py +22 -0
  240. snappy/tiling/lifted_tetrahedron_set.py +54 -0
  241. snappy/tiling/real_hash_dict.py +164 -0
  242. snappy/tiling/test.py +23 -0
  243. snappy/tiling/tile.py +215 -0
  244. snappy/tiling/triangle.py +33 -0
  245. snappy/tkterminal.py +113 -84
  246. snappy/twister/main.py +1 -7
  247. snappy/twister/twister_core.cpython-312-darwin.so +0 -0
  248. snappy/upper_halfspace/__init__.py +78 -17
  249. snappy/verify/__init__.py +3 -7
  250. snappy/verify/{verifyCanonical.py → canonical.py} +78 -70
  251. snappy/verify/complex_volume/adjust_torsion.py +1 -2
  252. snappy/verify/complex_volume/closed.py +13 -13
  253. snappy/verify/complex_volume/cusped.py +6 -6
  254. snappy/verify/complex_volume/extended_bloch.py +5 -8
  255. snappy/verify/{cuspTranslations.py → cusp_translations.py} +1 -1
  256. snappy/verify/edge_equations.py +80 -0
  257. snappy/verify/exceptions.py +0 -55
  258. snappy/verify/{verifyHyperbolicity.py → hyperbolicity.py} +3 -3
  259. snappy/verify/interval_newton_shapes_engine.py +7 -5
  260. snappy/verify/interval_tree.py +5 -5
  261. snappy/verify/krawczyk_shapes_engine.py +17 -18
  262. snappy/verify/maximal_cusp_area_matrix/__init__.py +7 -74
  263. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +3 -4
  264. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +1 -1
  265. snappy/verify/{realAlgebra.py → real_algebra.py} +1 -1
  266. snappy/verify/shapes.py +5 -3
  267. snappy/verify/short_slopes.py +39 -41
  268. snappy/verify/{squareExtensions.py → square_extensions.py} +14 -11
  269. snappy/verify/test.py +57 -60
  270. snappy/verify/upper_halfspace/extended_matrix.py +1 -1
  271. snappy/verify/upper_halfspace/finite_point.py +3 -4
  272. snappy/verify/upper_halfspace/ideal_point.py +9 -9
  273. snappy/verify/volume.py +2 -2
  274. snappy/version.py +2 -2
  275. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/METADATA +25 -11
  276. snappy-3.2.dist-info/RECORD +503 -0
  277. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/WHEEL +1 -1
  278. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/top_level.txt +6 -1
  279. snappy/__pycache__/__init__.cpython-312.pyc +0 -0
  280. snappy/__pycache__/browser.cpython-312.pyc +0 -0
  281. snappy/__pycache__/cache.cpython-312.pyc +0 -0
  282. snappy/__pycache__/database.cpython-312.pyc +0 -0
  283. snappy/__pycache__/db_utilities.cpython-312.pyc +0 -0
  284. snappy/__pycache__/decorated_isosig.cpython-312.pyc +0 -0
  285. snappy/__pycache__/exceptions.cpython-312.pyc +0 -0
  286. snappy/__pycache__/export_stl.cpython-312.pyc +0 -0
  287. snappy/__pycache__/filedialog.cpython-312.pyc +0 -0
  288. snappy/__pycache__/gui.cpython-312.pyc +0 -0
  289. snappy/__pycache__/horoviewer.cpython-312.pyc +0 -0
  290. snappy/__pycache__/infowindow.cpython-312.pyc +0 -0
  291. snappy/__pycache__/math_basics.cpython-312.pyc +0 -0
  292. snappy/__pycache__/matrix.cpython-312.pyc +0 -0
  293. snappy/__pycache__/number.cpython-312.pyc +0 -0
  294. snappy/__pycache__/numeric_output_checker.cpython-312.pyc +0 -0
  295. snappy/__pycache__/pari.cpython-312.pyc +0 -0
  296. snappy/__pycache__/polyviewer.cpython-312.pyc +0 -0
  297. snappy/__pycache__/sage_helper.cpython-312.pyc +0 -0
  298. snappy/__pycache__/version.cpython-312.pyc +0 -0
  299. snappy/doc/_sources/verify_canon.rst.txt +0 -90
  300. snappy/doc/_static/js/html5shiv-printshiv.min.js +0 -4
  301. snappy/doc/_static/js/html5shiv.min.js +0 -4
  302. snappy/doc/verify_canon.html +0 -304
  303. snappy/drilling/__pycache__/__init__.cpython-312.pyc +0 -0
  304. snappy/drilling/__pycache__/constants.cpython-312.pyc +0 -0
  305. snappy/drilling/__pycache__/crush.cpython-312.pyc +0 -0
  306. snappy/drilling/__pycache__/cusps.cpython-312.pyc +0 -0
  307. snappy/drilling/__pycache__/debug.cpython-312.pyc +0 -0
  308. snappy/drilling/__pycache__/epsilons.cpython-312.pyc +0 -0
  309. snappy/drilling/__pycache__/exceptions.cpython-312.pyc +0 -0
  310. snappy/drilling/__pycache__/fixed_points.cpython-312.pyc +0 -0
  311. snappy/drilling/__pycache__/geodesic_info.cpython-312.pyc +0 -0
  312. snappy/drilling/__pycache__/geodesic_tube.cpython-312.pyc +0 -0
  313. snappy/drilling/__pycache__/geometric_structure.cpython-312.pyc +0 -0
  314. snappy/drilling/__pycache__/line.cpython-312.pyc +0 -0
  315. snappy/drilling/__pycache__/moves.cpython-312.pyc +0 -0
  316. snappy/drilling/__pycache__/peripheral_curves.cpython-312.pyc +0 -0
  317. snappy/drilling/__pycache__/perturb.cpython-312.pyc +0 -0
  318. snappy/drilling/__pycache__/quotient_space.cpython-312.pyc +0 -0
  319. snappy/drilling/__pycache__/spatial_dict.cpython-312.pyc +0 -0
  320. snappy/drilling/__pycache__/subdivide.cpython-312.pyc +0 -0
  321. snappy/drilling/__pycache__/tracing.cpython-312.pyc +0 -0
  322. snappy/drilling/geodesic_tube.py +0 -441
  323. snappy/drilling/geometric_structure.py +0 -366
  324. snappy/drilling/line.py +0 -122
  325. snappy/drilling/quotient_space.py +0 -94
  326. snappy/drilling/spatial_dict.py +0 -128
  327. snappy/exterior_to_link/__pycache__/__init__.cpython-312.pyc +0 -0
  328. snappy/exterior_to_link/__pycache__/barycentric_geometry.cpython-312.pyc +0 -0
  329. snappy/exterior_to_link/__pycache__/exceptions.cpython-312.pyc +0 -0
  330. snappy/exterior_to_link/__pycache__/hyp_utils.cpython-312.pyc +0 -0
  331. snappy/exterior_to_link/__pycache__/link_projection.cpython-312.pyc +0 -0
  332. snappy/exterior_to_link/__pycache__/main.cpython-312.pyc +0 -0
  333. snappy/exterior_to_link/__pycache__/mcomplex_with_expansion.cpython-312.pyc +0 -0
  334. snappy/exterior_to_link/__pycache__/mcomplex_with_link.cpython-312.pyc +0 -0
  335. snappy/exterior_to_link/__pycache__/mcomplex_with_memory.cpython-312.pyc +0 -0
  336. snappy/exterior_to_link/__pycache__/pl_utils.cpython-312.pyc +0 -0
  337. snappy/exterior_to_link/__pycache__/put_in_S3.cpython-312.pyc +0 -0
  338. snappy/exterior_to_link/__pycache__/rational_linear_algebra.cpython-312.pyc +0 -0
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  411. snappy/togl/darwin-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  412. snappy/togl/darwin-tk8.7/Togl2.1/LICENSE +0 -28
  413. snappy/togl/darwin-tk8.7/Togl2.1/libTogl2.1.dylib +0 -0
  414. snappy/togl/darwin-tk8.7/Togl2.1/pkgIndex.tcl +0 -5
  415. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  416. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/libTogl2.1.so +0 -0
  417. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  418. snappy/togl/win32VC-tk8.6/Togl2.1/LICENSE +0 -28
  419. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.dll +0 -0
  420. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.lib +0 -0
  421. snappy/togl/win32VC-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  422. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  423. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.dll +0 -0
  424. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.lib +0 -0
  425. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  426. snappy/twister/__pycache__/__init__.cpython-312.pyc +0 -0
  427. snappy/twister/__pycache__/main.cpython-312.pyc +0 -0
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  429. snappy/upper_halfspace/__pycache__/ideal_point.cpython-312.pyc +0 -0
  430. snappy/verify/__pycache__/__init__.cpython-312.pyc +0 -0
  431. snappy/verify/__pycache__/cuspCrossSection.cpython-312.pyc +0 -0
  432. snappy/verify/__pycache__/cuspTranslations.cpython-312.pyc +0 -0
  433. snappy/verify/__pycache__/cusp_areas.cpython-312.pyc +0 -0
  434. snappy/verify/__pycache__/cusp_shapes.cpython-312.pyc +0 -0
  435. snappy/verify/__pycache__/exceptions.cpython-312.pyc +0 -0
  436. snappy/verify/__pycache__/interval_newton_shapes_engine.cpython-312.pyc +0 -0
  437. snappy/verify/__pycache__/interval_tree.cpython-312.pyc +0 -0
  438. snappy/verify/__pycache__/krawczyk_shapes_engine.cpython-312.pyc +0 -0
  439. snappy/verify/__pycache__/realAlgebra.cpython-312.pyc +0 -0
  440. snappy/verify/__pycache__/shapes.cpython-312.pyc +0 -0
  441. snappy/verify/__pycache__/short_slopes.cpython-312.pyc +0 -0
  442. snappy/verify/__pycache__/squareExtensions.cpython-312.pyc +0 -0
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  447. snappy/verify/complex_volume/__pycache__/adjust_torsion.cpython-312.pyc +0 -0
  448. snappy/verify/complex_volume/__pycache__/closed.cpython-312.pyc +0 -0
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  450. snappy/verify/complex_volume/__pycache__/cusped.cpython-312.pyc +0 -0
  451. snappy/verify/complex_volume/__pycache__/extended_bloch.cpython-312.pyc +0 -0
  452. snappy/verify/cuspCrossSection.py +0 -1422
  453. snappy/verify/maximal_cusp_area_matrix/__pycache__/__init__.cpython-312.pyc +0 -0
  454. snappy/verify/maximal_cusp_area_matrix/__pycache__/cusp_tiling_engine.cpython-312.pyc +0 -0
  455. snappy/verify/maximal_cusp_area_matrix/__pycache__/cusp_translate_engine.cpython-312.pyc +0 -0
  456. snappy/verify/upper_halfspace/__pycache__/__init__.cpython-312.pyc +0 -0
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  459. snappy/verify/upper_halfspace/__pycache__/ideal_point.cpython-312.pyc +0 -0
  460. snappy-3.1.1.dist-info/RECORD +0 -585
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snappy/doc/additional_classes.html CHANGED
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+ <title>Additional Classes &mdash; SnapPy 3.2 documentation</title>
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+ <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
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@@ -71,11 +69,15 @@
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  <li class="toctree-l4"><a class="reference internal" href="#snappy.HolonomyGroup"><code class="docutils literal notranslate"><span class="pre">HolonomyGroup</span></code></a><ul>
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@@ -133,7 +139,6 @@
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@@ -232,7 +237,7 @@ InfinityTangle, IdentityBraid, random_link, DTcodec.</p>
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@@ -347,21 +352,29 @@ with the FundamentalGroup class.</p>
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  <dt class="sig sig-object py" id="snappy.HolonomyGroup.O31">
350
- <span class="sig-name descname"><span class="pre">O31</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.O31" title="Link to this definition"></a></dt>
355
+ <span class="sig-name descname"><span class="pre">O31</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span><span class="p"><span class="pre">:</span></span><span class="w"> </span><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.O31" title="Link to this definition"></a></dt>
351
356
  <dd><p>Return the image of the element represented by the input word
352
- under the holonomy representation, where Isom(H^3) is
353
- identified with SO(3,1).</p>
357
+ under the holonomy representation, where
358
+ <span class="math notranslate nohighlight">\(\text{Isom}(\mathbb{H}^3)\)</span> is
359
+ identified with <span class="math notranslate nohighlight">\(\text{SO}(3,1)\)</span>.</p>
354
360
  </dd></dl>
355
361
 
356
362
  <dl class="py method">
357
363
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.SL2C">
358
- <span class="sig-name descname"><span class="pre">SL2C</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.SL2C" title="Link to this definition"></a></dt>
364
+ <span class="sig-name descname"><span class="pre">SL2C</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span><span class="p"><span class="pre">:</span></span><span class="w"> </span><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.SL2C" title="Link to this definition"></a></dt>
359
365
  <dd><p>Return the image of the element represented by the input word
360
- under some SL(2,C) representation that lifts the holonomy
361
- representation. Note: the choice of lift is not guaranteed to
366
+ under some <span class="math notranslate nohighlight">\(\text{SL}(2,\mathbb{C})\)</span>-representation that
367
+ lifts the holonomy representation.
368
+ Note: the choice of lift is not guaranteed to
362
369
  vary continuously when filling coefficients are changed.</p>
363
370
  </dd></dl>
364
371
 
372
+ <dl class="py method">
373
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.category">
374
+ <span class="sig-name descname"><span class="pre">category</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.category" title="Link to this definition"></a></dt>
375
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 514)</p>
376
+ </dd></dl>
377
+
365
378
  <dl class="py method">
366
379
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.character_variety_vars_and_polys">
367
380
  <span class="sig-name descname"><span class="pre">character_variety_vars_and_polys</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">as_ideal</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.character_variety_vars_and_polys" title="Link to this definition"></a></dt>
@@ -395,11 +408,46 @@ ideal:</p>
395
408
 
396
409
  <dl class="py method">
397
410
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.complex_length">
398
- <span class="sig-name descname"><span class="pre">complex_length</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.complex_length" title="Link to this definition"></a></dt>
411
+ <span class="sig-name descname"><span class="pre">complex_length</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">word</span></span><span class="p"><span class="pre">:</span></span><span class="w"> </span><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.complex_length" title="Link to this definition"></a></dt>
399
412
  <dd><p>Return the complex length of the isometry represented by the
400
413
  input word.</p>
401
414
  </dd></dl>
402
415
 
416
+ <dl class="py method">
417
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.dump">
418
+ <span class="sig-name descname"><span class="pre">dump</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">filename</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">compress</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.dump" title="Link to this definition"></a></dt>
419
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 475)</p>
420
+ <p>Same as self.save(filename, compress)</p>
421
+ </dd></dl>
422
+
423
+ <dl class="py method">
424
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.dumps">
425
+ <span class="sig-name descname"><span class="pre">dumps</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">compress</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.dumps" title="Link to this definition"></a></dt>
426
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 481)</p>
427
+ <p>Dump <code class="docutils literal notranslate"><span class="pre">self</span></code> to a string <code class="docutils literal notranslate"><span class="pre">s</span></code>, which can later be reconstituted
428
+ as <code class="docutils literal notranslate"><span class="pre">self</span></code> using <code class="docutils literal notranslate"><span class="pre">loads(s)</span></code>.</p>
429
+ <p>There is an optional boolean argument <code class="docutils literal notranslate"><span class="pre">compress</span></code> which defaults to <code class="docutils literal notranslate"><span class="pre">True</span></code>.</p>
430
+ <p>EXAMPLES:</p>
431
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="kn">from</span> <span class="nn">sage.misc.persist</span> <span class="kn">import</span> <span class="n">comp</span>
432
+ <span class="n">sage</span><span class="p">:</span> <span class="n">O</span> <span class="o">=</span> <span class="n">SageObject</span><span class="p">()</span>
433
+ <span class="n">sage</span><span class="p">:</span> <span class="n">p_comp</span> <span class="o">=</span> <span class="n">O</span><span class="o">.</span><span class="n">dumps</span><span class="p">()</span>
434
+ <span class="n">sage</span><span class="p">:</span> <span class="n">p_uncomp</span> <span class="o">=</span> <span class="n">O</span><span class="o">.</span><span class="n">dumps</span><span class="p">(</span><span class="n">compress</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
435
+ <span class="n">sage</span><span class="p">:</span> <span class="n">comp</span><span class="o">.</span><span class="n">decompress</span><span class="p">(</span><span class="n">p_comp</span><span class="p">)</span> <span class="o">==</span> <span class="n">p_uncomp</span>
436
+ <span class="kc">True</span>
437
+ <span class="n">sage</span><span class="p">:</span> <span class="kn">import</span> <span class="nn">pickletools</span>
438
+ <span class="n">sage</span><span class="p">:</span> <span class="n">pickletools</span><span class="o">.</span><span class="n">dis</span><span class="p">(</span><span class="n">p_uncomp</span><span class="p">)</span>
439
+ <span class="mi">0</span><span class="p">:</span> \<span class="n">x80</span> <span class="n">PROTO</span> <span class="mi">2</span>
440
+ <span class="mi">2</span><span class="p">:</span> <span class="n">c</span> <span class="n">GLOBAL</span> <span class="s1">&#39;sage.structure.sage_object SageObject&#39;</span>
441
+ <span class="mi">41</span><span class="p">:</span> <span class="n">q</span> <span class="n">BINPUT</span> <span class="o">...</span>
442
+ <span class="mi">43</span><span class="p">:</span> <span class="p">)</span> <span class="n">EMPTY_TUPLE</span>
443
+ <span class="mi">44</span><span class="p">:</span> \<span class="n">x81</span> <span class="n">NEWOBJ</span>
444
+ <span class="mi">45</span><span class="p">:</span> <span class="n">q</span> <span class="n">BINPUT</span> <span class="o">...</span>
445
+ <span class="mi">47</span><span class="p">:</span> <span class="o">.</span> <span class="n">STOP</span>
446
+ <span class="n">highest</span> <span class="n">protocol</span> <span class="n">among</span> <span class="n">opcodes</span> <span class="o">=</span> <span class="mi">2</span>
447
+ </pre></div>
448
+ </div>
449
+ </dd></dl>
450
+
403
451
  <dl class="py method">
404
452
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.gap_string">
405
453
  <span class="sig-name descname"><span class="pre">gap_string</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.gap_string" title="Link to this definition"></a></dt>
@@ -482,9 +530,29 @@ function in fundamental_group.pyx for details.</p>
482
530
  </div>
483
531
  </dd></dl>
484
532
 
533
+ <dl class="py method">
534
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.get_custom_name">
535
+ <span class="sig-name descname"><span class="pre">get_custom_name</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.get_custom_name" title="Link to this definition"></a></dt>
536
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 150)</p>
537
+ <p>Return the custom name of this object, or <code class="docutils literal notranslate"><span class="pre">None</span></code> if it is not
538
+ renamed.</p>
539
+ <p>EXAMPLES:</p>
540
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.&lt;</span><span class="n">x</span><span class="o">&gt;</span> <span class="o">=</span> <span class="n">QQ</span><span class="p">[]</span>
541
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">get_custom_name</span><span class="p">()</span> <span class="ow">is</span> <span class="kc">None</span>
542
+ <span class="kc">True</span>
543
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="s1">&#39;A polynomial ring&#39;</span><span class="p">)</span>
544
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">get_custom_name</span><span class="p">()</span>
545
+ <span class="s1">&#39;A polynomial ring&#39;</span>
546
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">reset_name</span><span class="p">()</span>
547
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">get_custom_name</span><span class="p">()</span> <span class="ow">is</span> <span class="kc">None</span>
548
+ <span class="kc">True</span>
549
+ </pre></div>
550
+ </div>
551
+ </dd></dl>
552
+
485
553
  <dl class="py method">
486
554
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.longitude">
487
- <span class="sig-name descname"><span class="pre">longitude</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">int</span> <span class="pre">which_cusp=0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">as_int_list=False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.longitude" title="Link to this definition"></a></dt>
555
+ <span class="sig-name descname"><span class="pre">longitude</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">which_cusp</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">as_int_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.longitude" title="Link to this definition"></a></dt>
488
556
  <dd><p>Returns a word representing a conjugate of the current
489
557
  longitude for the given cusp. Guaranteed to commute with the
490
558
  meridian for the same cusp. Note: for Klein bottle cusps,
@@ -506,7 +574,7 @@ the longitude must be defined carefully.</p>
506
574
 
507
575
  <dl class="py method">
508
576
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.meridian">
509
- <span class="sig-name descname"><span class="pre">meridian</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">int</span> <span class="pre">which_cusp=0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">as_int_list=False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.meridian" title="Link to this definition"></a></dt>
577
+ <span class="sig-name descname"><span class="pre">meridian</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">which_cusp</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">as_int_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.meridian" title="Link to this definition"></a></dt>
510
578
  <dd><p>Returns a word representing a conjugate of the current
511
579
  meridian for the given cusp. Guaranteed to commute with the
512
580
  longitude for the same cusp.</p>
@@ -550,6 +618,21 @@ simplification) in terms of the current generators.</p>
550
618
  </div>
551
619
  </dd></dl>
552
620
 
621
+ <dl class="py method">
622
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.parent">
623
+ <span class="sig-name descname"><span class="pre">parent</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.parent" title="Link to this definition"></a></dt>
624
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 549)</p>
625
+ <p>Return the type of <code class="docutils literal notranslate"><span class="pre">self</span></code> to support the coercion framework.</p>
626
+ <p>EXAMPLES:</p>
627
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: t = log(sqrt(2) - 1) + log(sqrt(2) + 1); t # needs sage.symbolic
628
+ log(sqrt(2) + 1) + log(sqrt(2) - 1)
629
+ sage: u = t.maxima_methods() # needs sage.symbolic
630
+ sage: u.parent() # needs sage.symbolic
631
+ &lt;class &#39;sage.symbolic.maxima_wrapper.MaximaWrapper&#39;&gt;
632
+ </pre></div>
633
+ </div>
634
+ </dd></dl>
635
+
553
636
  <dl class="py method">
554
637
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.peripheral_curves">
555
638
  <span class="sig-name descname"><span class="pre">peripheral_curves</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">as_int_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.peripheral_curves" title="Link to this definition"></a></dt>
@@ -569,12 +652,102 @@ simplification) in terms of the current generators.</p>
569
652
  relator is returned in the form “a*b*a^-1*b^-1” instead of “abAB”.</p>
570
653
  </dd></dl>
571
654
 
655
+ <dl class="py method">
656
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.rename">
657
+ <span class="sig-name descname"><span class="pre">rename</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.rename" title="Link to this definition"></a></dt>
658
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 68)</p>
659
+ <p>Change <code class="docutils literal notranslate"><span class="pre">self</span></code> so it prints as x, where x is a string.</p>
660
+ <p>If x is <code class="docutils literal notranslate"><span class="pre">None</span></code>, the existing custom name is removed.</p>
661
+ <div class="admonition note">
662
+ <p class="admonition-title">Note</p>
663
+ <p>This is <em>only</em> supported for Python classes that derive
664
+ from SageObject.</p>
665
+ </div>
666
+ <p>EXAMPLES:</p>
667
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">x</span> <span class="o">=</span> <span class="n">PolynomialRing</span><span class="p">(</span><span class="n">QQ</span><span class="p">,</span> <span class="s1">&#39;x&#39;</span><span class="p">,</span> <span class="n">sparse</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span><span class="o">.</span><span class="n">gen</span><span class="p">()</span>
668
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span> <span class="o">=</span> <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="n">x</span> <span class="o">-</span> <span class="mi">5</span>
669
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span>
670
+ <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="n">x</span> <span class="o">-</span> <span class="mi">5</span>
671
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="s1">&#39;a polynomial&#39;</span><span class="p">)</span>
672
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span>
673
+ <span class="n">a</span> <span class="n">polynomial</span>
674
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span> <span class="o">+</span> <span class="n">x</span>
675
+ <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="mi">2</span><span class="o">*</span><span class="n">x</span> <span class="o">-</span> <span class="mi">5</span>
676
+ <span class="n">sage</span><span class="p">:</span> <span class="n">h</span> <span class="o">=</span> <span class="n">g</span><span class="o">^</span><span class="mi">100</span>
677
+ <span class="n">sage</span><span class="p">:</span> <span class="nb">str</span><span class="p">(</span><span class="n">h</span><span class="p">)[:</span><span class="mi">20</span><span class="p">]</span>
678
+ <span class="s1">&#39;x^300 + 100*x^298 - &#39;</span>
679
+ <span class="n">sage</span><span class="p">:</span> <span class="n">h</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="s1">&#39;x^300 + ...&#39;</span><span class="p">)</span>
680
+ <span class="n">sage</span><span class="p">:</span> <span class="n">h</span>
681
+ <span class="n">x</span><span class="o">^</span><span class="mi">300</span> <span class="o">+</span> <span class="o">...</span>
682
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="kc">None</span><span class="p">)</span>
683
+ <span class="n">sage</span><span class="p">:</span> <span class="n">g</span>
684
+ <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="n">x</span> <span class="o">-</span> <span class="mi">5</span>
685
+ </pre></div>
686
+ </div>
687
+ <p>Real numbers are not Python classes, so rename is not supported:</p>
688
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">a</span> <span class="o">=</span> <span class="mf">3.14</span>
689
+ <span class="n">sage</span><span class="p">:</span> <span class="nb">type</span><span class="p">(</span><span class="n">a</span><span class="p">)</span> <span class="c1"># needs sage.rings.real_mpfr</span>
690
+ <span class="o">&lt;...</span> <span class="s1">&#39;sage.rings.real_mpfr.RealLiteral&#39;</span><span class="o">&gt;</span>
691
+ <span class="n">sage</span><span class="p">:</span> <span class="n">a</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="s1">&#39;pi&#39;</span><span class="p">)</span> <span class="c1"># needs sage.rings.real_mpfr</span>
692
+ <span class="n">Traceback</span> <span class="p">(</span><span class="n">most</span> <span class="n">recent</span> <span class="n">call</span> <span class="n">last</span><span class="p">):</span>
693
+ <span class="o">...</span>
694
+ <span class="ne">NotImplementedError</span><span class="p">:</span> <span class="nb">object</span> <span class="n">does</span> <span class="ow">not</span> <span class="n">support</span> <span class="n">renaming</span><span class="p">:</span> <span class="mf">3.14000000000000</span>
695
+ </pre></div>
696
+ </div>
697
+ <div class="admonition note">
698
+ <p class="admonition-title">Note</p>
699
+ <p>The reason C-extension types are not supported by default
700
+ is if they were then every single one would have to carry
701
+ around an extra attribute, which would be slower and waste
702
+ a lot of memory.</p>
703
+ <p>To support them for a specific class, add a
704
+ <code class="docutils literal notranslate"><span class="pre">cdef</span> <span class="pre">public</span> <span class="pre">_SageObject__custom_name</span></code> attribute.</p>
705
+ </div>
706
+ </dd></dl>
707
+
708
+ <dl class="py method">
709
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.reset_name">
710
+ <span class="sig-name descname"><span class="pre">reset_name</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.reset_name" title="Link to this definition"></a></dt>
711
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 131)</p>
712
+ <p>Remove the custom name of an object.</p>
713
+ <p>EXAMPLES:</p>
714
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.&lt;</span><span class="n">x</span><span class="o">&gt;</span> <span class="o">=</span> <span class="n">QQ</span><span class="p">[]</span>
715
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span>
716
+ <span class="n">Univariate</span> <span class="n">Polynomial</span> <span class="n">Ring</span> <span class="ow">in</span> <span class="n">x</span> <span class="n">over</span> <span class="n">Rational</span> <span class="n">Field</span>
717
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">rename</span><span class="p">(</span><span class="s1">&#39;A polynomial ring&#39;</span><span class="p">)</span>
718
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span>
719
+ <span class="n">A</span> <span class="n">polynomial</span> <span class="n">ring</span>
720
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span><span class="o">.</span><span class="n">reset_name</span><span class="p">()</span>
721
+ <span class="n">sage</span><span class="p">:</span> <span class="n">P</span>
722
+ <span class="n">Univariate</span> <span class="n">Polynomial</span> <span class="n">Ring</span> <span class="ow">in</span> <span class="n">x</span> <span class="n">over</span> <span class="n">Rational</span> <span class="n">Field</span>
723
+ </pre></div>
724
+ </div>
725
+ </dd></dl>
726
+
572
727
  <dl class="py method">
573
728
  <dt class="sig sig-object py" id="snappy.HolonomyGroup.sage">
574
729
  <span class="sig-name descname"><span class="pre">sage</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.sage" title="Link to this definition"></a></dt>
575
730
  <dd><p>Returns the corresponding Sage FinitelyPresentedGroup</p>
576
731
  </dd></dl>
577
732
 
733
+ <dl class="py method">
734
+ <dt class="sig sig-object py" id="snappy.HolonomyGroup.save">
735
+ <span class="sig-name descname"><span class="pre">save</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">filename</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">compress</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#snappy.HolonomyGroup.save" title="Link to this definition"></a></dt>
736
+ <dd><p>File: sage/structure/sage_object.pyx (starting at line 446)</p>
737
+ <p>Save <code class="docutils literal notranslate"><span class="pre">self</span></code> to the given filename.</p>
738
+ <p>EXAMPLES:</p>
739
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="c1"># needs sage.symbolic</span>
740
+ <span class="n">sage</span><span class="p">:</span> <span class="n">x</span> <span class="o">=</span> <span class="n">SR</span><span class="o">.</span><span class="n">var</span><span class="p">(</span><span class="s2">&quot;x&quot;</span><span class="p">)</span>
741
+ <span class="n">sage</span><span class="p">:</span> <span class="n">f</span> <span class="o">=</span> <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="mi">5</span>
742
+ <span class="n">sage</span><span class="p">:</span> <span class="kn">from</span> <span class="nn">tempfile</span> <span class="kn">import</span> <span class="n">NamedTemporaryFile</span>
743
+ <span class="n">sage</span><span class="p">:</span> <span class="k">with</span> <span class="n">NamedTemporaryFile</span><span class="p">(</span><span class="n">suffix</span><span class="o">=</span><span class="s1">&#39;.sobj&#39;</span><span class="p">)</span> <span class="k">as</span> <span class="n">t</span><span class="p">:</span>
744
+ <span class="o">....</span><span class="p">:</span> <span class="n">f</span><span class="o">.</span><span class="n">save</span><span class="p">(</span><span class="n">t</span><span class="o">.</span><span class="n">name</span><span class="p">)</span>
745
+ <span class="o">....</span><span class="p">:</span> <span class="n">load</span><span class="p">(</span><span class="n">t</span><span class="o">.</span><span class="n">name</span><span class="p">)</span>
746
+ <span class="n">x</span><span class="o">^</span><span class="mi">3</span> <span class="o">+</span> <span class="mi">5</span>
747
+ </pre></div>
748
+ </div>
749
+ </dd></dl>
750
+
578
751
  </dd></dl>
579
752
 
580
753
  </section>
@@ -791,7 +964,8 @@ polyhedral group, return a description of it.</p>
791
964
  a hyperbolic manifold, typically centered at a point which
792
965
  is a local maximum of injectivity radius. It will have ideal
793
966
  vertices if the manifold is not closed.</p>
794
- <p>Instantiate as M.dirichlet_domain() where M is a Manifold to
967
+ <p>Instantiate as M.dirichlet_domain()
968
+ where M is a Manifold to
795
969
  obtain a Dirichlet Domain centered at a point which maximizes
796
970
  injectivity radius.</p>
797
971
  <p>Other options can be provided to customize the computation, with
@@ -803,9 +977,9 @@ the default values shown here</p>
803
977
  </div>
804
978
  <p>You can also create a Dirichlet Domain from a file listing matrix
805
979
  generators for the group, in SnapPea’s “% Generator” format, via</p>
806
- <blockquote>
807
- <div><p>D = DirichletDomain(generator_file=’test.gens’)</p>
808
- </div></blockquote>
980
+ <div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">D</span> <span class="o">=</span> <span class="n">DirichletDomain</span><span class="p">(</span><span class="n">generator_file</span><span class="o">=</span><span class="s1">&#39;test.gens&#39;</span><span class="p">)</span>
981
+ </pre></div>
982
+ </div>
809
983
  <p>Or from matrices:</p>
810
984
  <div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">G</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s1">&#39;m004&#39;</span><span class="p">)</span><span class="o">.</span><span class="n">fundamental_group</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
811
985
  <span class="gp">&gt;&gt;&gt; </span><span class="n">matrices</span> <span class="o">=</span> <span class="p">[</span> <span class="n">G</span><span class="o">.</span><span class="n">O31</span><span class="p">(</span><span class="s1">&#39;a&#39;</span><span class="p">),</span> <span class="n">G</span><span class="o">.</span><span class="n">O31</span><span class="p">(</span><span class="s1">&#39;b&#39;</span><span class="p">),</span> <span class="n">G</span><span class="o">.</span><span class="n">O31</span><span class="p">(</span><span class="s1">&#39;c&#39;</span><span class="p">)</span> <span class="p">]</span> <span class="c1"># Note: some of the matrices contain (near) 0 entries and thus this tests that Object2Real converts small numbers fromatted by pari as &quot;1.0 E-10&quot; (note the pace before &quot;E&quot;) correctly when not in SageMath.</span>
@@ -816,7 +990,7 @@ generators for the group, in SnapPea’s “% Generator” format, via</p>
816
990
  </div>
817
991
  <p>The group elements for the face-pairings of the Dirichlet domain
818
992
  can be given as words in the original generators by setting
819
- include_words = True.</p>
993
+ <code class="docutils literal notranslate"><span class="pre">include_words</span> <span class="pre">=</span> <span class="pre">True</span></code>.</p>
820
994
  <dl class="py method">
821
995
  <dt class="sig sig-object py" id="snappy.DirichletDomain.edge_list">
822
996
  <span class="sig-name descname"><span class="pre">edge_list</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.DirichletDomain.edge_list" title="Link to this definition"></a></dt>
@@ -1061,11 +1235,6 @@ to is the value for ‘vertex_class’. The value for ‘ideal’
1061
1235
  is True if the vertex is an ideal point.</p>
1062
1236
  </dd></dl>
1063
1237
 
1064
- <dl class="py method">
1065
- <dt class="sig sig-object py" id="snappy.DirichletDomain.view">
1066
- <span class="sig-name descname"><span class="pre">view</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.DirichletDomain.view" title="Link to this definition"></a></dt>
1067
- <dd></dd></dl>
1068
-
1069
1238
  <dl class="py method">
1070
1239
  <dt class="sig sig-object py" id="snappy.DirichletDomain.volume">
1071
1240
  <span class="sig-name descname"><span class="pre">volume</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#snappy.DirichletDomain.volume" title="Link to this definition"></a></dt>
@@ -1308,7 +1477,7 @@ cusp.</p>
1308
1477
  <hr/>
1309
1478
 
1310
1479
  <div role="contentinfo">
1311
- <p>&#169; Copyright 2009-2023, by Marc Culler, Nathan Dunfield, Matthias Goerner, Jeffrey Weeks and others.</p>
1480
+ <p>&#169; Copyright 2009-2025, by Marc Culler, Nathan Dunfield, Matthias Goerner, Jeffrey Weeks and others.</p>
1312
1481
  </div>
1313
1482
 
1314
1483
  Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a
snappy/doc/bugs.html CHANGED
@@ -1,23 +1,23 @@
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+
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+
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3
  <!DOCTYPE html>
2
- <html class="writer-html5" lang="en" >
4
+ <html class="writer-html5" lang="en" data-content_root="./">
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  <head>
4
- <meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
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+ <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
5
7
 
6
8
  <meta name="viewport" content="width=device-width, initial-scale=1.0" />
7
- <title>Reporting bugs and other problems &mdash; SnapPy 3.1.1 documentation</title>
8
- <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
9
- <link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
10
- <link rel="stylesheet" href="_static/snappy_sphinx_rtd_theme.css" type="text/css" />
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- <link rel="shortcut icon" href="_static/SnapPy.ico"/>
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- <!--[if lt IE 9]>
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- <script src="_static/js/html5shiv.min.js"></script>
14
- <![endif]-->
9
+ <title>Reporting bugs and other problems &mdash; SnapPy 3.2 documentation</title>
10
+ <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
11
+ <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
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+ <link rel="stylesheet" type="text/css" href="_static/snappy_sphinx_rtd_theme.css?v=1b8ec2a8" />
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+
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- <script src="_static/jquery.js?v=5d32c60e"></script>
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- <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
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- <script src="_static/documentation_options.js?v=796a81b5"></script>
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- <script src="_static/doctools.js?v=888ff710"></script>
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- <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
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+ <link rel="shortcut icon" href="_static/SnapPy.ico"/>
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+ <script src="_static/jquery.js?v=5d32c60e"></script>
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+ <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
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+ <script src="_static/documentation_options.js?v=828ea960"></script>
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+ <script src="_static/doctools.js?v=9a2dae69"></script>
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+ <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
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  <script src="_static/js/theme.js"></script>
22
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  <link rel="index" title="Index" href="genindex.html" />
23
23
  <link rel="search" title="Search" href="search.html" />
@@ -37,9 +37,6 @@
37
37
  SnapPy
38
38
  <img src="_static/SnapPy-horizontal-128.png" class="logo" alt="Logo"/>
39
39
  </a>
40
- <div class="version">
41
- 3.1.1
42
- </div>
43
40
  <div role="search">
44
41
  <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
45
42
  <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
@@ -112,7 +109,7 @@ verbatim copies of any error messages.</p>
112
109
  <hr/>
113
110
 
114
111
  <div role="contentinfo">
115
- <p>&#169; Copyright 2009-2023, by Marc Culler, Nathan Dunfield, Matthias Goerner, Jeffrey Weeks and others.</p>
112
+ <p>&#169; Copyright 2009-2025, by Marc Culler, Nathan Dunfield, Matthias Goerner, Jeffrey Weeks and others.</p>
116
113
  </div>
117
114
 
118
115
  Built with <a href="https://www.sphinx-doc.org/">Sphinx</a> using a