sequenzo 0.1.19__cp39-cp39-win_amd64.whl → 0.1.21__cp39-cp39-win_amd64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of sequenzo might be problematic. Click here for more details.
- sequenzo/big_data/clara/utils/get_weighted_diss.c +194 -193
- sequenzo/big_data/clara/utils/get_weighted_diss.cp39-win_amd64.pyd +0 -0
- sequenzo/clustering/clustering_c_code.cp39-win_amd64.pyd +0 -0
- sequenzo/clustering/hierarchical_clustering.py +2 -2
- sequenzo/define_sequence_data.py +4 -4
- sequenzo/dissimilarity_measures/c_code.cp39-win_amd64.pyd +0 -0
- sequenzo/dissimilarity_measures/get_distance_matrix.py +1 -1
- sequenzo/dissimilarity_measures/get_substitution_cost_matrix.py +1 -1
- sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.c +171 -171
- sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.cp39-win_amd64.pyd +0 -0
- sequenzo/dissimilarity_measures/utils/seqconc.c +233 -232
- sequenzo/dissimilarity_measures/utils/seqconc.cp39-win_amd64.pyd +0 -0
- sequenzo/dissimilarity_measures/utils/seqdss.c +326 -325
- sequenzo/dissimilarity_measures/utils/seqdss.cp39-win_amd64.pyd +0 -0
- sequenzo/dissimilarity_measures/utils/seqdur.c +326 -325
- sequenzo/dissimilarity_measures/utils/seqdur.cp39-win_amd64.pyd +0 -0
- sequenzo/dissimilarity_measures/utils/seqlength.c +226 -224
- sequenzo/dissimilarity_measures/utils/seqlength.cp39-win_amd64.pyd +0 -0
- sequenzo/multidomain/association_between_domains.py +1 -1
- sequenzo/multidomain/combt.py +4 -4
- sequenzo/multidomain/dat.py +11 -3
- sequenzo/multidomain/idcd.py +0 -2
- sequenzo/multidomain/linked_polyad.py +3 -4
- sequenzo/prefix_tree/__init__.py +1 -1
- sequenzo/prefix_tree/individual_level_indicators.py +2 -2
- sequenzo/sequence_characteristics/overall_cross_sectional_entropy.py +2 -2
- sequenzo/sequence_characteristics/plot_characteristics.py +2 -2
- sequenzo/sequence_characteristics/simple_characteristics.py +2 -2
- sequenzo/suffix_tree/__init__.py +1 -1
- sequenzo/suffix_tree/individual_level_indicators.py +3 -3
- sequenzo/visualization/plot_single_medoid.py +2 -2
- sequenzo/visualization/plot_transition_matrix.py +1 -1
- sequenzo/visualization/utils/utils.py +2 -2
- sequenzo/with_event_history_analysis/sequence_analysis_multi_state_model.py +1 -1
- {sequenzo-0.1.19.dist-info → sequenzo-0.1.21.dist-info}/METADATA +37 -6
- {sequenzo-0.1.19.dist-info → sequenzo-0.1.21.dist-info}/RECORD +39 -45
- sequenzo/big_data/clara/utils/get_weighted_diss.pyx +0 -16
- sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx +0 -95
- sequenzo/dissimilarity_measures/utils/seqconc.pyx +0 -26
- sequenzo/dissimilarity_measures/utils/seqdss.pyx +0 -33
- sequenzo/dissimilarity_measures/utils/seqdur.pyx +0 -34
- sequenzo/dissimilarity_measures/utils/seqlength.pyx +0 -19
- {sequenzo-0.1.19.dist-info → sequenzo-0.1.21.dist-info}/WHEEL +0 -0
- {sequenzo-0.1.19.dist-info → sequenzo-0.1.21.dist-info}/licenses/LICENSE +0 -0
- {sequenzo-0.1.19.dist-info → sequenzo-0.1.21.dist-info}/top_level.txt +0 -0
|
@@ -6,15 +6,15 @@
|
|
|
6
6
|
"define_macros": [
|
|
7
7
|
[
|
|
8
8
|
"NPY_NO_DEPRECATED_API",
|
|
9
|
-
"
|
|
9
|
+
"NPY_1_7_API_VERSION"
|
|
10
10
|
]
|
|
11
11
|
],
|
|
12
12
|
"depends": [
|
|
13
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
14
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
15
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
16
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
17
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
13
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include\\numpy\\arrayobject.h",
|
|
14
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include\\numpy\\arrayscalars.h",
|
|
15
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include\\numpy\\ndarrayobject.h",
|
|
16
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include\\numpy\\ndarraytypes.h",
|
|
17
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include\\numpy\\ufuncobject.h"
|
|
18
18
|
],
|
|
19
19
|
"extra_compile_args": [
|
|
20
20
|
"/W1",
|
|
@@ -23,9 +23,9 @@
|
|
|
23
23
|
"/O2"
|
|
24
24
|
],
|
|
25
25
|
"include_dirs": [
|
|
26
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
27
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
28
|
-
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-
|
|
26
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\pybind11\\include",
|
|
27
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\pybind11\\include",
|
|
28
|
+
"C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pip-build-env-4xiaq35t\\overlay\\Lib\\site-packages\\numpy\\_core\\include",
|
|
29
29
|
"sequenzo/dissimilarity_measures/src/",
|
|
30
30
|
"D:\\a\\Sequenzo\\Sequenzo\\sequenzo\\dissimilarity_measures\\src\\xsimd\\include",
|
|
31
31
|
"sequenzo/clustering/src/"
|
|
@@ -1398,7 +1398,7 @@ static const char *__pyx_filename;
|
|
|
1398
1398
|
|
|
1399
1399
|
static const char* const __pyx_f[] = {
|
|
1400
1400
|
"sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx",
|
|
1401
|
-
"C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1401
|
+
"C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd",
|
|
1402
1402
|
"cpython/type.pxd",
|
|
1403
1403
|
};
|
|
1404
1404
|
/* #### Code section: utility_code_proto_before_types ### */
|
|
@@ -1598,7 +1598,7 @@ typedef struct {
|
|
|
1598
1598
|
|
|
1599
1599
|
/* #### Code section: numeric_typedefs ### */
|
|
1600
1600
|
|
|
1601
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1601
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":770
|
|
1602
1602
|
* # in Cython to enable them only on the right systems.
|
|
1603
1603
|
*
|
|
1604
1604
|
* ctypedef npy_int8 int8_t # <<<<<<<<<<<<<<
|
|
@@ -1607,7 +1607,7 @@ typedef struct {
|
|
|
1607
1607
|
*/
|
|
1608
1608
|
typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
1609
1609
|
|
|
1610
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1610
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":771
|
|
1611
1611
|
*
|
|
1612
1612
|
* ctypedef npy_int8 int8_t
|
|
1613
1613
|
* ctypedef npy_int16 int16_t # <<<<<<<<<<<<<<
|
|
@@ -1616,7 +1616,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
|
1616
1616
|
*/
|
|
1617
1617
|
typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
1618
1618
|
|
|
1619
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1619
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":772
|
|
1620
1620
|
* ctypedef npy_int8 int8_t
|
|
1621
1621
|
* ctypedef npy_int16 int16_t
|
|
1622
1622
|
* ctypedef npy_int32 int32_t # <<<<<<<<<<<<<<
|
|
@@ -1625,7 +1625,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
|
1625
1625
|
*/
|
|
1626
1626
|
typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
1627
1627
|
|
|
1628
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1628
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":773
|
|
1629
1629
|
* ctypedef npy_int16 int16_t
|
|
1630
1630
|
* ctypedef npy_int32 int32_t
|
|
1631
1631
|
* ctypedef npy_int64 int64_t # <<<<<<<<<<<<<<
|
|
@@ -1634,7 +1634,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
|
1634
1634
|
*/
|
|
1635
1635
|
typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
1636
1636
|
|
|
1637
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1637
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":777
|
|
1638
1638
|
* #ctypedef npy_int128 int128_t
|
|
1639
1639
|
*
|
|
1640
1640
|
* ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<<
|
|
@@ -1643,7 +1643,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
|
1643
1643
|
*/
|
|
1644
1644
|
typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
1645
1645
|
|
|
1646
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1646
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":778
|
|
1647
1647
|
*
|
|
1648
1648
|
* ctypedef npy_uint8 uint8_t
|
|
1649
1649
|
* ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<<
|
|
@@ -1652,7 +1652,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
|
1652
1652
|
*/
|
|
1653
1653
|
typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
1654
1654
|
|
|
1655
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1655
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":779
|
|
1656
1656
|
* ctypedef npy_uint8 uint8_t
|
|
1657
1657
|
* ctypedef npy_uint16 uint16_t
|
|
1658
1658
|
* ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<<
|
|
@@ -1661,7 +1661,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
|
1661
1661
|
*/
|
|
1662
1662
|
typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
1663
1663
|
|
|
1664
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1664
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":780
|
|
1665
1665
|
* ctypedef npy_uint16 uint16_t
|
|
1666
1666
|
* ctypedef npy_uint32 uint32_t
|
|
1667
1667
|
* ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<<
|
|
@@ -1670,7 +1670,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
|
1670
1670
|
*/
|
|
1671
1671
|
typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
1672
1672
|
|
|
1673
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1673
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":784
|
|
1674
1674
|
* #ctypedef npy_uint128 uint128_t
|
|
1675
1675
|
*
|
|
1676
1676
|
* ctypedef npy_float32 float32_t # <<<<<<<<<<<<<<
|
|
@@ -1679,7 +1679,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
|
1679
1679
|
*/
|
|
1680
1680
|
typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
1681
1681
|
|
|
1682
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1682
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":785
|
|
1683
1683
|
*
|
|
1684
1684
|
* ctypedef npy_float32 float32_t
|
|
1685
1685
|
* ctypedef npy_float64 float64_t # <<<<<<<<<<<<<<
|
|
@@ -1688,7 +1688,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
|
1688
1688
|
*/
|
|
1689
1689
|
typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
1690
1690
|
|
|
1691
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1691
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":792
|
|
1692
1692
|
* ctypedef double complex complex128_t
|
|
1693
1693
|
*
|
|
1694
1694
|
* ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<<
|
|
@@ -1697,7 +1697,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
|
1697
1697
|
*/
|
|
1698
1698
|
typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
1699
1699
|
|
|
1700
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1700
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":793
|
|
1701
1701
|
*
|
|
1702
1702
|
* ctypedef npy_longlong longlong_t
|
|
1703
1703
|
* ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<<
|
|
@@ -1706,7 +1706,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
|
1706
1706
|
*/
|
|
1707
1707
|
typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
1708
1708
|
|
|
1709
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1709
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":795
|
|
1710
1710
|
* ctypedef npy_ulonglong ulonglong_t
|
|
1711
1711
|
*
|
|
1712
1712
|
* ctypedef npy_intp intp_t # <<<<<<<<<<<<<<
|
|
@@ -1715,7 +1715,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
|
1715
1715
|
*/
|
|
1716
1716
|
typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
1717
1717
|
|
|
1718
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1718
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":796
|
|
1719
1719
|
*
|
|
1720
1720
|
* ctypedef npy_intp intp_t
|
|
1721
1721
|
* ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<<
|
|
@@ -1724,7 +1724,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
|
1724
1724
|
*/
|
|
1725
1725
|
typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
1726
1726
|
|
|
1727
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1727
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":798
|
|
1728
1728
|
* ctypedef npy_uintp uintp_t
|
|
1729
1729
|
*
|
|
1730
1730
|
* ctypedef npy_double float_t # <<<<<<<<<<<<<<
|
|
@@ -1733,7 +1733,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
|
1733
1733
|
*/
|
|
1734
1734
|
typedef npy_double __pyx_t_5numpy_float_t;
|
|
1735
1735
|
|
|
1736
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1736
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":799
|
|
1737
1737
|
*
|
|
1738
1738
|
* ctypedef npy_double float_t
|
|
1739
1739
|
* ctypedef npy_double double_t # <<<<<<<<<<<<<<
|
|
@@ -1742,7 +1742,7 @@ typedef npy_double __pyx_t_5numpy_float_t;
|
|
|
1742
1742
|
*/
|
|
1743
1743
|
typedef npy_double __pyx_t_5numpy_double_t;
|
|
1744
1744
|
|
|
1745
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1745
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":800
|
|
1746
1746
|
* ctypedef npy_double float_t
|
|
1747
1747
|
* ctypedef npy_double double_t
|
|
1748
1748
|
* ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<<
|
|
@@ -1791,7 +1791,7 @@ static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_fro
|
|
|
1791
1791
|
|
|
1792
1792
|
/*--- Type declarations ---*/
|
|
1793
1793
|
|
|
1794
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1794
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1096
|
|
1795
1795
|
*
|
|
1796
1796
|
* # Iterator API added in v1.6
|
|
1797
1797
|
* ctypedef int (*NpyIter_IterNextFunc)(NpyIter* it) noexcept nogil # <<<<<<<<<<<<<<
|
|
@@ -1800,7 +1800,7 @@ static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_fro
|
|
|
1800
1800
|
*/
|
|
1801
1801
|
typedef int (*__pyx_t_5numpy_NpyIter_IterNextFunc)(NpyIter *);
|
|
1802
1802
|
|
|
1803
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
1803
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1097
|
|
1804
1804
|
* # Iterator API added in v1.6
|
|
1805
1805
|
* ctypedef int (*NpyIter_IterNextFunc)(NpyIter* it) noexcept nogil
|
|
1806
1806
|
* ctypedef void (*NpyIter_GetMultiIndexFunc)(NpyIter* it, npy_intp* outcoords) noexcept nogil # <<<<<<<<<<<<<<
|
|
@@ -2901,7 +2901,7 @@ static const char __pyx_k_num_transition[] = "num_transition";
|
|
|
2901
2901
|
static const char __pyx_k_asyncio_coroutines[] = "asyncio.coroutines";
|
|
2902
2902
|
static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback";
|
|
2903
2903
|
static const char __pyx_k_sequenzo_define_sequence_data[] = "sequenzo.define_sequence_data";
|
|
2904
|
-
static const char __pyx_k_a_t_Qiq_j_q_HAWJfBa_E_q_F_A_WG5[] = "\200\001\340\004\005\330\004\005\330\004\005\330\004\005\360\014\000\005\n\320\t.\250a\330\004\007\200t\210:\220Q\220i\230q\330\010\016\210j\230\001\230\021\360\006\000\005\010\200q\330\010\022\220\"\220H\230A\230W\240J\250f\260B\260a\340\010\022\220\"\220E\230\021\230'\240\030\250\026\250q\260\004\260F\270\"\270A\340\004\r\210W\220G\2305\240\001\330\004\024\220G\230>\250\025\250a\340\004\025\220S\230\001\230\030\240\022\2401\330\004\t\210\027\220\001\330\004\026\220b\230\006\230a\230q\330\004\024\220B\220f\230A\230Q\360\010\000\005\010\200t\2102\210Q\330\010\031\230\024\230Q\230e\2401\240C\240q\250\006\250a\340\010\031\230\024\230Q\230e\2401\240E\250\022\2501\340\004\036\230c\240\021\240!\360\006\000\005\017\210b\220\t\230\021\230&\240\002\240!\330\
|
|
2904
|
+
static const char __pyx_k_a_t_Qiq_j_q_HAWJfBa_E_q_F_A_WG5[] = "\200\001\340\004\005\330\004\005\330\004\005\330\004\005\360\014\000\005\n\320\t.\250a\330\004\007\200t\210:\220Q\220i\230q\330\010\016\210j\230\001\230\021\360\006\000\005\010\200q\330\010\022\220\"\220H\230A\230W\240J\250f\260B\260a\340\010\022\220\"\220E\230\021\230'\240\030\250\026\250q\260\004\260F\270\"\270A\340\004\r\210W\220G\2305\240\001\330\004\024\220G\230>\250\025\250a\340\004\025\220S\230\001\230\030\240\022\2401\330\004\t\210\027\220\001\330\004\026\220b\230\006\230a\230q\330\004\024\220B\220f\230A\230Q\360\010\000\005\010\200t\2102\210Q\330\010\031\230\024\230Q\230e\2401\240C\240q\250\006\250a\340\010\031\230\024\230Q\230e\2401\240E\250\022\2501\340\004\036\230c\240\021\240!\360\006\000\005\017\210b\220\t\230\021\230&\240\002\240!\330\0049\270\021\340\004\007\200q\330\010\017\210r\220\026\220r\320\031)\250\027\260\010\270\006\270b\300\001\340\010\014\210E\220\026\220y\240\001\240\021\330\014\020\220\013\230=\250\007\250q\330\020\025\220Q\330\020\024\220E\230\025\230a\230q\330\024\027\220z\240\021\240#\240T\250\023\250H\260D\270\004\270E\300\021\300*\310A\310S\320PS\320SU\320UV\330\030\036\230g\240Q\240a\340\020\023\2203\220c\230\021\330\024\030\230\001\230\025\230n\250A\340\024\030\230\013\240=\260\007\260q\330\030\036\230a\330\030\034\230E\240\025\240a\240q\330\034 \240\n\250!\2503\250d\260#\260X\270Q\330 $\240E\250\021\250*\260A\260S\270\003\2702\270V\3001\330 *\250!\2503\250c\260\022\2605\270\003\2701\330 '\240w\250a\250q\340\030\034\230A\230U\240)\250;\260g\270[\310\004\310B\310a\360\006\000\t\020\210r\220\026\220r\230\027\240\010\250\006\250b\260\001\340\010\014\210K\220}\240G\2501\330\014\021\220\021\330\014\020\220\005\220U\230!\2301\330\020\024\220E\230\021\330\024\030\230\n\240!\2403\240c\250\023\250H\260D\270\004\270E\300\021\300*\310A\310S\320PR\320RT\320TU\330\030\036\230g\240Q\240a\340\014\017\210s\220#\220Q\330\020\024\220A\220^\2401\340\020\024\220K\230}\250G\2601\330\024\032\230!\330\024\030\230\005\230U\240!\2401\330\030\034\230E\240""\021\330\034 \240\n\250!\2503\250c\260\023\260H\270D\300\n\310!\3103\310b\320PR\320RW\320WZ\320Z[\330 '\240w\250a\250q\340\024\030\230\001\230\031\240+\250W\260K\270t\3002\300Q\340\004\013\2101";
|
|
2905
2905
|
static const char __pyx_k_sequenzo_dissimilarity_measures[] = "sequenzo.dissimilarity_measures.utils.get_sm_trate_substitution_cost_matrix";
|
|
2906
2906
|
static const char __pyx_k_x_Seqdata_must_be_a_pandas_Data[] = "[x] Seqdata must be a pandas DataFrame wrapped in a SequenceData object.";
|
|
2907
2907
|
static const char __pyx_k_get_sm_trate_substitution_cost_m[] = "get_sm_trate_substitution_cost_matrix";
|
|
@@ -3161,7 +3161,7 @@ static CYTHON_SMALL_CODE int __pyx_m_traverse(PyObject *m, visitproc visit, void
|
|
|
3161
3161
|
#endif
|
|
3162
3162
|
/* #### Code section: module_code ### */
|
|
3163
3163
|
|
|
3164
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3164
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
|
|
3165
3165
|
* cdef int type_num
|
|
3166
3166
|
*
|
|
3167
3167
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3172,7 +3172,7 @@ static CYTHON_SMALL_CODE int __pyx_m_traverse(PyObject *m, visitproc visit, void
|
|
|
3172
3172
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_Descr *__pyx_v_self) {
|
|
3173
3173
|
npy_intp __pyx_r;
|
|
3174
3174
|
|
|
3175
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3175
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":287
|
|
3176
3176
|
* @property
|
|
3177
3177
|
* cdef inline npy_intp itemsize(self) noexcept nogil:
|
|
3178
3178
|
* return PyDataType_ELSIZE(self) # <<<<<<<<<<<<<<
|
|
@@ -3182,7 +3182,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_D
|
|
|
3182
3182
|
__pyx_r = PyDataType_ELSIZE(__pyx_v_self);
|
|
3183
3183
|
goto __pyx_L0;
|
|
3184
3184
|
|
|
3185
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3185
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
|
|
3186
3186
|
* cdef int type_num
|
|
3187
3187
|
*
|
|
3188
3188
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3195,7 +3195,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_D
|
|
|
3195
3195
|
return __pyx_r;
|
|
3196
3196
|
}
|
|
3197
3197
|
|
|
3198
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3198
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":289
|
|
3199
3199
|
* return PyDataType_ELSIZE(self)
|
|
3200
3200
|
*
|
|
3201
3201
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3206,7 +3206,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_D
|
|
|
3206
3206
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray_Descr *__pyx_v_self) {
|
|
3207
3207
|
npy_intp __pyx_r;
|
|
3208
3208
|
|
|
3209
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3209
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":291
|
|
3210
3210
|
* @property
|
|
3211
3211
|
* cdef inline npy_intp alignment(self) noexcept nogil:
|
|
3212
3212
|
* return PyDataType_ALIGNMENT(self) # <<<<<<<<<<<<<<
|
|
@@ -3216,7 +3216,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray
|
|
|
3216
3216
|
__pyx_r = PyDataType_ALIGNMENT(__pyx_v_self);
|
|
3217
3217
|
goto __pyx_L0;
|
|
3218
3218
|
|
|
3219
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3219
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":289
|
|
3220
3220
|
* return PyDataType_ELSIZE(self)
|
|
3221
3221
|
*
|
|
3222
3222
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3229,7 +3229,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray
|
|
|
3229
3229
|
return __pyx_r;
|
|
3230
3230
|
}
|
|
3231
3231
|
|
|
3232
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3232
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":295
|
|
3233
3233
|
* # Use fields/names with care as they may be NULL. You must check
|
|
3234
3234
|
* # for this using PyDataType_HASFIELDS.
|
|
3235
3235
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3243,7 +3243,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_6fields_fields(PyArray_Desc
|
|
|
3243
3243
|
PyObject *__pyx_t_1;
|
|
3244
3244
|
__Pyx_RefNannySetupContext("fields", 0);
|
|
3245
3245
|
|
|
3246
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3246
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":297
|
|
3247
3247
|
* @property
|
|
3248
3248
|
* cdef inline object fields(self):
|
|
3249
3249
|
* return <object>PyDataType_FIELDS(self) # <<<<<<<<<<<<<<
|
|
@@ -3256,7 +3256,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_6fields_fields(PyArray_Desc
|
|
|
3256
3256
|
__pyx_r = ((PyObject *)__pyx_t_1);
|
|
3257
3257
|
goto __pyx_L0;
|
|
3258
3258
|
|
|
3259
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3259
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":295
|
|
3260
3260
|
* # Use fields/names with care as they may be NULL. You must check
|
|
3261
3261
|
* # for this using PyDataType_HASFIELDS.
|
|
3262
3262
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3271,7 +3271,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_6fields_fields(PyArray_Desc
|
|
|
3271
3271
|
return __pyx_r;
|
|
3272
3272
|
}
|
|
3273
3273
|
|
|
3274
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3274
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":299
|
|
3275
3275
|
* return <object>PyDataType_FIELDS(self)
|
|
3276
3276
|
*
|
|
3277
3277
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3285,7 +3285,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr
|
|
|
3285
3285
|
PyObject *__pyx_t_1;
|
|
3286
3286
|
__Pyx_RefNannySetupContext("names", 0);
|
|
3287
3287
|
|
|
3288
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3288
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":301
|
|
3289
3289
|
* @property
|
|
3290
3290
|
* cdef inline tuple names(self):
|
|
3291
3291
|
* return <tuple>PyDataType_NAMES(self) # <<<<<<<<<<<<<<
|
|
@@ -3298,7 +3298,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr
|
|
|
3298
3298
|
__pyx_r = ((PyObject*)__pyx_t_1);
|
|
3299
3299
|
goto __pyx_L0;
|
|
3300
3300
|
|
|
3301
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3301
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":299
|
|
3302
3302
|
* return <object>PyDataType_FIELDS(self)
|
|
3303
3303
|
*
|
|
3304
3304
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3313,7 +3313,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr
|
|
|
3313
3313
|
return __pyx_r;
|
|
3314
3314
|
}
|
|
3315
3315
|
|
|
3316
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3316
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":306
|
|
3317
3317
|
* # valid (the pointer can be NULL). Most users should access
|
|
3318
3318
|
* # this field via the inline helper method PyDataType_SHAPE.
|
|
3319
3319
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3324,7 +3324,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr
|
|
|
3324
3324
|
static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarray(PyArray_Descr *__pyx_v_self) {
|
|
3325
3325
|
PyArray_ArrayDescr *__pyx_r;
|
|
3326
3326
|
|
|
3327
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3327
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":308
|
|
3328
3328
|
* @property
|
|
3329
3329
|
* cdef inline PyArray_ArrayDescr* subarray(self) noexcept nogil:
|
|
3330
3330
|
* return PyDataType_SUBARRAY(self) # <<<<<<<<<<<<<<
|
|
@@ -3334,7 +3334,7 @@ static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarra
|
|
|
3334
3334
|
__pyx_r = PyDataType_SUBARRAY(__pyx_v_self);
|
|
3335
3335
|
goto __pyx_L0;
|
|
3336
3336
|
|
|
3337
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3337
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":306
|
|
3338
3338
|
* # valid (the pointer can be NULL). Most users should access
|
|
3339
3339
|
* # this field via the inline helper method PyDataType_SHAPE.
|
|
3340
3340
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3347,7 +3347,7 @@ static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarra
|
|
|
3347
3347
|
return __pyx_r;
|
|
3348
3348
|
}
|
|
3349
3349
|
|
|
3350
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3350
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":310
|
|
3351
3351
|
* return PyDataType_SUBARRAY(self)
|
|
3352
3352
|
*
|
|
3353
3353
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3358,7 +3358,7 @@ static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarra
|
|
|
3358
3358
|
static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr *__pyx_v_self) {
|
|
3359
3359
|
npy_uint64 __pyx_r;
|
|
3360
3360
|
|
|
3361
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3361
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":313
|
|
3362
3362
|
* cdef inline npy_uint64 flags(self) noexcept nogil:
|
|
3363
3363
|
* """The data types flags."""
|
|
3364
3364
|
* return PyDataType_FLAGS(self) # <<<<<<<<<<<<<<
|
|
@@ -3368,7 +3368,7 @@ static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr
|
|
|
3368
3368
|
__pyx_r = PyDataType_FLAGS(__pyx_v_self);
|
|
3369
3369
|
goto __pyx_L0;
|
|
3370
3370
|
|
|
3371
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3371
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":310
|
|
3372
3372
|
* return PyDataType_SUBARRAY(self)
|
|
3373
3373
|
*
|
|
3374
3374
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3381,7 +3381,7 @@ static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr
|
|
|
3381
3381
|
return __pyx_r;
|
|
3382
3382
|
}
|
|
3383
3383
|
|
|
3384
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3384
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":322
|
|
3385
3385
|
* ctypedef class numpy.broadcast [object PyArrayMultiIterObject, check_size ignore]:
|
|
3386
3386
|
*
|
|
3387
3387
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3392,7 +3392,7 @@ static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr
|
|
|
3392
3392
|
static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3393
3393
|
int __pyx_r;
|
|
3394
3394
|
|
|
3395
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3395
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":325
|
|
3396
3396
|
* cdef inline int numiter(self) noexcept nogil:
|
|
3397
3397
|
* """The number of arrays that need to be broadcast to the same shape."""
|
|
3398
3398
|
* return PyArray_MultiIter_NUMITER(self) # <<<<<<<<<<<<<<
|
|
@@ -3402,7 +3402,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMulti
|
|
|
3402
3402
|
__pyx_r = PyArray_MultiIter_NUMITER(__pyx_v_self);
|
|
3403
3403
|
goto __pyx_L0;
|
|
3404
3404
|
|
|
3405
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3405
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":322
|
|
3406
3406
|
* ctypedef class numpy.broadcast [object PyArrayMultiIterObject, check_size ignore]:
|
|
3407
3407
|
*
|
|
3408
3408
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3415,7 +3415,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMulti
|
|
|
3415
3415
|
return __pyx_r;
|
|
3416
3416
|
}
|
|
3417
3417
|
|
|
3418
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3418
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":327
|
|
3419
3419
|
* return PyArray_MultiIter_NUMITER(self)
|
|
3420
3420
|
*
|
|
3421
3421
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3426,7 +3426,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMulti
|
|
|
3426
3426
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3427
3427
|
npy_intp __pyx_r;
|
|
3428
3428
|
|
|
3429
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3429
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":330
|
|
3430
3430
|
* cdef inline npy_intp size(self) noexcept nogil:
|
|
3431
3431
|
* """The total broadcasted size."""
|
|
3432
3432
|
* return PyArray_MultiIter_SIZE(self) # <<<<<<<<<<<<<<
|
|
@@ -3436,7 +3436,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiI
|
|
|
3436
3436
|
__pyx_r = PyArray_MultiIter_SIZE(__pyx_v_self);
|
|
3437
3437
|
goto __pyx_L0;
|
|
3438
3438
|
|
|
3439
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3439
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":327
|
|
3440
3440
|
* return PyArray_MultiIter_NUMITER(self)
|
|
3441
3441
|
*
|
|
3442
3442
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3449,7 +3449,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiI
|
|
|
3449
3449
|
return __pyx_r;
|
|
3450
3450
|
}
|
|
3451
3451
|
|
|
3452
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3452
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":332
|
|
3453
3453
|
* return PyArray_MultiIter_SIZE(self)
|
|
3454
3454
|
*
|
|
3455
3455
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3460,7 +3460,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiI
|
|
|
3460
3460
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3461
3461
|
npy_intp __pyx_r;
|
|
3462
3462
|
|
|
3463
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3463
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":335
|
|
3464
3464
|
* cdef inline npy_intp index(self) noexcept nogil:
|
|
3465
3465
|
* """The current (1-d) index into the broadcasted result."""
|
|
3466
3466
|
* return PyArray_MultiIter_INDEX(self) # <<<<<<<<<<<<<<
|
|
@@ -3470,7 +3470,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMult
|
|
|
3470
3470
|
__pyx_r = PyArray_MultiIter_INDEX(__pyx_v_self);
|
|
3471
3471
|
goto __pyx_L0;
|
|
3472
3472
|
|
|
3473
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3473
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":332
|
|
3474
3474
|
* return PyArray_MultiIter_SIZE(self)
|
|
3475
3475
|
*
|
|
3476
3476
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3483,7 +3483,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMult
|
|
|
3483
3483
|
return __pyx_r;
|
|
3484
3484
|
}
|
|
3485
3485
|
|
|
3486
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3486
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":337
|
|
3487
3487
|
* return PyArray_MultiIter_INDEX(self)
|
|
3488
3488
|
*
|
|
3489
3489
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3494,7 +3494,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMult
|
|
|
3494
3494
|
static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3495
3495
|
int __pyx_r;
|
|
3496
3496
|
|
|
3497
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3497
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":340
|
|
3498
3498
|
* cdef inline int nd(self) noexcept nogil:
|
|
3499
3499
|
* """The number of dimensions in the broadcasted result."""
|
|
3500
3500
|
* return PyArray_MultiIter_NDIM(self) # <<<<<<<<<<<<<<
|
|
@@ -3504,7 +3504,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject
|
|
|
3504
3504
|
__pyx_r = PyArray_MultiIter_NDIM(__pyx_v_self);
|
|
3505
3505
|
goto __pyx_L0;
|
|
3506
3506
|
|
|
3507
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3507
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":337
|
|
3508
3508
|
* return PyArray_MultiIter_INDEX(self)
|
|
3509
3509
|
*
|
|
3510
3510
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3517,7 +3517,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject
|
|
|
3517
3517
|
return __pyx_r;
|
|
3518
3518
|
}
|
|
3519
3519
|
|
|
3520
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3520
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":342
|
|
3521
3521
|
* return PyArray_MultiIter_NDIM(self)
|
|
3522
3522
|
*
|
|
3523
3523
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3528,7 +3528,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject
|
|
|
3528
3528
|
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3529
3529
|
npy_intp *__pyx_r;
|
|
3530
3530
|
|
|
3531
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3531
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":345
|
|
3532
3532
|
* cdef inline npy_intp* dimensions(self) noexcept nogil:
|
|
3533
3533
|
* """The shape of the broadcasted result."""
|
|
3534
3534
|
* return PyArray_MultiIter_DIMS(self) # <<<<<<<<<<<<<<
|
|
@@ -3538,7 +3538,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions
|
|
|
3538
3538
|
__pyx_r = PyArray_MultiIter_DIMS(__pyx_v_self);
|
|
3539
3539
|
goto __pyx_L0;
|
|
3540
3540
|
|
|
3541
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3541
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":342
|
|
3542
3542
|
* return PyArray_MultiIter_NDIM(self)
|
|
3543
3543
|
*
|
|
3544
3544
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3551,7 +3551,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions
|
|
|
3551
3551
|
return __pyx_r;
|
|
3552
3552
|
}
|
|
3553
3553
|
|
|
3554
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3554
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":347
|
|
3555
3555
|
* return PyArray_MultiIter_DIMS(self)
|
|
3556
3556
|
*
|
|
3557
3557
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3562,7 +3562,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions
|
|
|
3562
3562
|
static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiIterObject *__pyx_v_self) {
|
|
3563
3563
|
void **__pyx_r;
|
|
3564
3564
|
|
|
3565
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3565
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":351
|
|
3566
3566
|
* """An array of iterator objects that holds the iterators for the arrays to be broadcast together.
|
|
3567
3567
|
* On return, the iterators are adjusted for broadcasting."""
|
|
3568
3568
|
* return PyArray_MultiIter_ITERS(self) # <<<<<<<<<<<<<<
|
|
@@ -3572,7 +3572,7 @@ static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiI
|
|
|
3572
3572
|
__pyx_r = PyArray_MultiIter_ITERS(__pyx_v_self);
|
|
3573
3573
|
goto __pyx_L0;
|
|
3574
3574
|
|
|
3575
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3575
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":347
|
|
3576
3576
|
* return PyArray_MultiIter_DIMS(self)
|
|
3577
3577
|
*
|
|
3578
3578
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3585,7 +3585,7 @@ static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiI
|
|
|
3585
3585
|
return __pyx_r;
|
|
3586
3586
|
}
|
|
3587
3587
|
|
|
3588
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3588
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":365
|
|
3589
3589
|
* # Instead, we use properties that map to the corresponding C-API functions.
|
|
3590
3590
|
*
|
|
3591
3591
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3596,7 +3596,7 @@ static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiI
|
|
|
3596
3596
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject *__pyx_v_self) {
|
|
3597
3597
|
PyObject *__pyx_r;
|
|
3598
3598
|
|
|
3599
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3599
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":369
|
|
3600
3600
|
* """Returns a borrowed reference to the object owning the data/memory.
|
|
3601
3601
|
* """
|
|
3602
3602
|
* return PyArray_BASE(self) # <<<<<<<<<<<<<<
|
|
@@ -3606,7 +3606,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
|
|
|
3606
3606
|
__pyx_r = PyArray_BASE(__pyx_v_self);
|
|
3607
3607
|
goto __pyx_L0;
|
|
3608
3608
|
|
|
3609
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3609
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":365
|
|
3610
3610
|
* # Instead, we use properties that map to the corresponding C-API functions.
|
|
3611
3611
|
*
|
|
3612
3612
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3619,7 +3619,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
|
|
|
3619
3619
|
return __pyx_r;
|
|
3620
3620
|
}
|
|
3621
3621
|
|
|
3622
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3622
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":371
|
|
3623
3623
|
* return PyArray_BASE(self)
|
|
3624
3624
|
*
|
|
3625
3625
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3633,7 +3633,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
3633
3633
|
PyArray_Descr *__pyx_t_1;
|
|
3634
3634
|
__Pyx_RefNannySetupContext("descr", 0);
|
|
3635
3635
|
|
|
3636
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3636
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":375
|
|
3637
3637
|
* """Returns an owned reference to the dtype of the array.
|
|
3638
3638
|
* """
|
|
3639
3639
|
* return <dtype>PyArray_DESCR(self) # <<<<<<<<<<<<<<
|
|
@@ -3646,7 +3646,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
3646
3646
|
__pyx_r = ((PyArray_Descr *)__pyx_t_1);
|
|
3647
3647
|
goto __pyx_L0;
|
|
3648
3648
|
|
|
3649
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3649
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":371
|
|
3650
3650
|
* return PyArray_BASE(self)
|
|
3651
3651
|
*
|
|
3652
3652
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3661,7 +3661,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
3661
3661
|
return __pyx_r;
|
|
3662
3662
|
}
|
|
3663
3663
|
|
|
3664
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3664
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":377
|
|
3665
3665
|
* return <dtype>PyArray_DESCR(self)
|
|
3666
3666
|
*
|
|
3667
3667
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3672,7 +3672,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
3672
3672
|
static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx_v_self) {
|
|
3673
3673
|
int __pyx_r;
|
|
3674
3674
|
|
|
3675
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3675
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":381
|
|
3676
3676
|
* """Returns the number of dimensions in the array.
|
|
3677
3677
|
* """
|
|
3678
3678
|
* return PyArray_NDIM(self) # <<<<<<<<<<<<<<
|
|
@@ -3682,7 +3682,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
3682
3682
|
__pyx_r = PyArray_NDIM(__pyx_v_self);
|
|
3683
3683
|
goto __pyx_L0;
|
|
3684
3684
|
|
|
3685
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3685
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":377
|
|
3686
3686
|
* return <dtype>PyArray_DESCR(self)
|
|
3687
3687
|
*
|
|
3688
3688
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3695,7 +3695,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
3695
3695
|
return __pyx_r;
|
|
3696
3696
|
}
|
|
3697
3697
|
|
|
3698
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3698
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":383
|
|
3699
3699
|
* return PyArray_NDIM(self)
|
|
3700
3700
|
*
|
|
3701
3701
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3706,7 +3706,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
3706
3706
|
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObject *__pyx_v_self) {
|
|
3707
3707
|
npy_intp *__pyx_r;
|
|
3708
3708
|
|
|
3709
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3709
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":389
|
|
3710
3710
|
* Can return NULL for 0-dimensional arrays.
|
|
3711
3711
|
* """
|
|
3712
3712
|
* return PyArray_DIMS(self) # <<<<<<<<<<<<<<
|
|
@@ -3716,7 +3716,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
3716
3716
|
__pyx_r = PyArray_DIMS(__pyx_v_self);
|
|
3717
3717
|
goto __pyx_L0;
|
|
3718
3718
|
|
|
3719
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3719
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":383
|
|
3720
3720
|
* return PyArray_NDIM(self)
|
|
3721
3721
|
*
|
|
3722
3722
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3729,7 +3729,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
3729
3729
|
return __pyx_r;
|
|
3730
3730
|
}
|
|
3731
3731
|
|
|
3732
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3732
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":391
|
|
3733
3733
|
* return PyArray_DIMS(self)
|
|
3734
3734
|
*
|
|
3735
3735
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3740,7 +3740,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
3740
3740
|
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayObject *__pyx_v_self) {
|
|
3741
3741
|
npy_intp *__pyx_r;
|
|
3742
3742
|
|
|
3743
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3743
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":396
|
|
3744
3744
|
* The number of elements matches the number of dimensions of the array (ndim).
|
|
3745
3745
|
* """
|
|
3746
3746
|
* return PyArray_STRIDES(self) # <<<<<<<<<<<<<<
|
|
@@ -3750,7 +3750,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
3750
3750
|
__pyx_r = PyArray_STRIDES(__pyx_v_self);
|
|
3751
3751
|
goto __pyx_L0;
|
|
3752
3752
|
|
|
3753
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3753
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":391
|
|
3754
3754
|
* return PyArray_DIMS(self)
|
|
3755
3755
|
*
|
|
3756
3756
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3763,7 +3763,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
3763
3763
|
return __pyx_r;
|
|
3764
3764
|
}
|
|
3765
3765
|
|
|
3766
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3766
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":398
|
|
3767
3767
|
* return PyArray_STRIDES(self)
|
|
3768
3768
|
*
|
|
3769
3769
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3774,7 +3774,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
3774
3774
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *__pyx_v_self) {
|
|
3775
3775
|
npy_intp __pyx_r;
|
|
3776
3776
|
|
|
3777
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3777
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":402
|
|
3778
3778
|
* """Returns the total size (in number of elements) of the array.
|
|
3779
3779
|
* """
|
|
3780
3780
|
* return PyArray_SIZE(self) # <<<<<<<<<<<<<<
|
|
@@ -3784,7 +3784,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
3784
3784
|
__pyx_r = PyArray_SIZE(__pyx_v_self);
|
|
3785
3785
|
goto __pyx_L0;
|
|
3786
3786
|
|
|
3787
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3787
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":398
|
|
3788
3788
|
* return PyArray_STRIDES(self)
|
|
3789
3789
|
*
|
|
3790
3790
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3797,7 +3797,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
3797
3797
|
return __pyx_r;
|
|
3798
3798
|
}
|
|
3799
3799
|
|
|
3800
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3800
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":404
|
|
3801
3801
|
* return PyArray_SIZE(self)
|
|
3802
3802
|
*
|
|
3803
3803
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3808,7 +3808,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
3808
3808
|
static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__pyx_v_self) {
|
|
3809
3809
|
char *__pyx_r;
|
|
3810
3810
|
|
|
3811
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3811
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":411
|
|
3812
3812
|
* of `PyArray_DATA()` instead, which returns a 'void*'.
|
|
3813
3813
|
* """
|
|
3814
3814
|
* return PyArray_BYTES(self) # <<<<<<<<<<<<<<
|
|
@@ -3818,7 +3818,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
|
|
|
3818
3818
|
__pyx_r = PyArray_BYTES(__pyx_v_self);
|
|
3819
3819
|
goto __pyx_L0;
|
|
3820
3820
|
|
|
3821
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3821
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":404
|
|
3822
3822
|
* return PyArray_SIZE(self)
|
|
3823
3823
|
*
|
|
3824
3824
|
* @property # <<<<<<<<<<<<<<
|
|
@@ -3831,7 +3831,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
|
|
|
3831
3831
|
return __pyx_r;
|
|
3832
3832
|
}
|
|
3833
3833
|
|
|
3834
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3834
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":807
|
|
3835
3835
|
* ctypedef long double complex clongdouble_t
|
|
3836
3836
|
*
|
|
3837
3837
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
@@ -3848,7 +3848,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
3848
3848
|
int __pyx_clineno = 0;
|
|
3849
3849
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew1", 0);
|
|
3850
3850
|
|
|
3851
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3851
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":808
|
|
3852
3852
|
*
|
|
3853
3853
|
* cdef inline object PyArray_MultiIterNew1(a):
|
|
3854
3854
|
* return PyArray_MultiIterNew(1, <void*>a) # <<<<<<<<<<<<<<
|
|
@@ -3862,7 +3862,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
3862
3862
|
__pyx_t_1 = 0;
|
|
3863
3863
|
goto __pyx_L0;
|
|
3864
3864
|
|
|
3865
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3865
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":807
|
|
3866
3866
|
* ctypedef long double complex clongdouble_t
|
|
3867
3867
|
*
|
|
3868
3868
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
@@ -3881,7 +3881,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
3881
3881
|
return __pyx_r;
|
|
3882
3882
|
}
|
|
3883
3883
|
|
|
3884
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3884
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":810
|
|
3885
3885
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
3886
3886
|
*
|
|
3887
3887
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
@@ -3898,7 +3898,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
3898
3898
|
int __pyx_clineno = 0;
|
|
3899
3899
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew2", 0);
|
|
3900
3900
|
|
|
3901
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3901
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":811
|
|
3902
3902
|
*
|
|
3903
3903
|
* cdef inline object PyArray_MultiIterNew2(a, b):
|
|
3904
3904
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b) # <<<<<<<<<<<<<<
|
|
@@ -3912,7 +3912,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
3912
3912
|
__pyx_t_1 = 0;
|
|
3913
3913
|
goto __pyx_L0;
|
|
3914
3914
|
|
|
3915
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3915
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":810
|
|
3916
3916
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
3917
3917
|
*
|
|
3918
3918
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
@@ -3931,7 +3931,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
3931
3931
|
return __pyx_r;
|
|
3932
3932
|
}
|
|
3933
3933
|
|
|
3934
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3934
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":813
|
|
3935
3935
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
3936
3936
|
*
|
|
3937
3937
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
@@ -3948,7 +3948,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
3948
3948
|
int __pyx_clineno = 0;
|
|
3949
3949
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew3", 0);
|
|
3950
3950
|
|
|
3951
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3951
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":814
|
|
3952
3952
|
*
|
|
3953
3953
|
* cdef inline object PyArray_MultiIterNew3(a, b, c):
|
|
3954
3954
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c) # <<<<<<<<<<<<<<
|
|
@@ -3962,7 +3962,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
3962
3962
|
__pyx_t_1 = 0;
|
|
3963
3963
|
goto __pyx_L0;
|
|
3964
3964
|
|
|
3965
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3965
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":813
|
|
3966
3966
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
3967
3967
|
*
|
|
3968
3968
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
@@ -3981,7 +3981,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
3981
3981
|
return __pyx_r;
|
|
3982
3982
|
}
|
|
3983
3983
|
|
|
3984
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
3984
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":816
|
|
3985
3985
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
3986
3986
|
*
|
|
3987
3987
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
@@ -3998,7 +3998,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
3998
3998
|
int __pyx_clineno = 0;
|
|
3999
3999
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew4", 0);
|
|
4000
4000
|
|
|
4001
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4001
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":817
|
|
4002
4002
|
*
|
|
4003
4003
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d):
|
|
4004
4004
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d) # <<<<<<<<<<<<<<
|
|
@@ -4012,7 +4012,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
4012
4012
|
__pyx_t_1 = 0;
|
|
4013
4013
|
goto __pyx_L0;
|
|
4014
4014
|
|
|
4015
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4015
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":816
|
|
4016
4016
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
4017
4017
|
*
|
|
4018
4018
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
@@ -4031,7 +4031,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
4031
4031
|
return __pyx_r;
|
|
4032
4032
|
}
|
|
4033
4033
|
|
|
4034
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4034
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":819
|
|
4035
4035
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
4036
4036
|
*
|
|
4037
4037
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
@@ -4048,7 +4048,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
4048
4048
|
int __pyx_clineno = 0;
|
|
4049
4049
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew5", 0);
|
|
4050
4050
|
|
|
4051
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4051
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":820
|
|
4052
4052
|
*
|
|
4053
4053
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
|
|
4054
4054
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e) # <<<<<<<<<<<<<<
|
|
@@ -4062,7 +4062,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
4062
4062
|
__pyx_t_1 = 0;
|
|
4063
4063
|
goto __pyx_L0;
|
|
4064
4064
|
|
|
4065
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4065
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":819
|
|
4066
4066
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
4067
4067
|
*
|
|
4068
4068
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
@@ -4081,7 +4081,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
4081
4081
|
return __pyx_r;
|
|
4082
4082
|
}
|
|
4083
4083
|
|
|
4084
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4084
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":822
|
|
4085
4085
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
4086
4086
|
*
|
|
4087
4087
|
* cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
|
|
@@ -4096,7 +4096,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4096
4096
|
PyObject *__pyx_t_2;
|
|
4097
4097
|
__Pyx_RefNannySetupContext("PyDataType_SHAPE", 0);
|
|
4098
4098
|
|
|
4099
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4099
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":823
|
|
4100
4100
|
*
|
|
4101
4101
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
4102
4102
|
* if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
|
|
@@ -4106,7 +4106,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4106
4106
|
__pyx_t_1 = PyDataType_HASSUBARRAY(__pyx_v_d);
|
|
4107
4107
|
if (__pyx_t_1) {
|
|
4108
4108
|
|
|
4109
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4109
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":824
|
|
4110
4110
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
4111
4111
|
* if PyDataType_HASSUBARRAY(d):
|
|
4112
4112
|
* return <tuple>d.subarray.shape # <<<<<<<<<<<<<<
|
|
@@ -4119,7 +4119,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4119
4119
|
__pyx_r = ((PyObject*)__pyx_t_2);
|
|
4120
4120
|
goto __pyx_L0;
|
|
4121
4121
|
|
|
4122
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4122
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":823
|
|
4123
4123
|
*
|
|
4124
4124
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
4125
4125
|
* if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
|
|
@@ -4128,7 +4128,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4128
4128
|
*/
|
|
4129
4129
|
}
|
|
4130
4130
|
|
|
4131
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4131
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":826
|
|
4132
4132
|
* return <tuple>d.subarray.shape
|
|
4133
4133
|
* else:
|
|
4134
4134
|
* return () # <<<<<<<<<<<<<<
|
|
@@ -4142,7 +4142,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4142
4142
|
goto __pyx_L0;
|
|
4143
4143
|
}
|
|
4144
4144
|
|
|
4145
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4145
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":822
|
|
4146
4146
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
4147
4147
|
*
|
|
4148
4148
|
* cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
|
|
@@ -4157,7 +4157,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
4157
4157
|
return __pyx_r;
|
|
4158
4158
|
}
|
|
4159
4159
|
|
|
4160
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4160
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1010
|
|
4161
4161
|
* int _import_umath() except -1
|
|
4162
4162
|
*
|
|
4163
4163
|
* cdef inline void set_array_base(ndarray arr, object base) except *: # <<<<<<<<<<<<<<
|
|
@@ -4171,7 +4171,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
4171
4171
|
const char *__pyx_filename = NULL;
|
|
4172
4172
|
int __pyx_clineno = 0;
|
|
4173
4173
|
|
|
4174
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4174
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1011
|
|
4175
4175
|
*
|
|
4176
4176
|
* cdef inline void set_array_base(ndarray arr, object base) except *:
|
|
4177
4177
|
* Py_INCREF(base) # important to do this before stealing the reference below! # <<<<<<<<<<<<<<
|
|
@@ -4180,7 +4180,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
4180
4180
|
*/
|
|
4181
4181
|
Py_INCREF(__pyx_v_base);
|
|
4182
4182
|
|
|
4183
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4183
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1012
|
|
4184
4184
|
* cdef inline void set_array_base(ndarray arr, object base) except *:
|
|
4185
4185
|
* Py_INCREF(base) # important to do this before stealing the reference below!
|
|
4186
4186
|
* PyArray_SetBaseObject(arr, base) # <<<<<<<<<<<<<<
|
|
@@ -4189,7 +4189,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
4189
4189
|
*/
|
|
4190
4190
|
__pyx_t_1 = PyArray_SetBaseObject(__pyx_v_arr, __pyx_v_base); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(1, 1012, __pyx_L1_error)
|
|
4191
4191
|
|
|
4192
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4192
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1010
|
|
4193
4193
|
* int _import_umath() except -1
|
|
4194
4194
|
*
|
|
4195
4195
|
* cdef inline void set_array_base(ndarray arr, object base) except *: # <<<<<<<<<<<<<<
|
|
@@ -4204,7 +4204,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
4204
4204
|
__pyx_L0:;
|
|
4205
4205
|
}
|
|
4206
4206
|
|
|
4207
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4207
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1014
|
|
4208
4208
|
* PyArray_SetBaseObject(arr, base)
|
|
4209
4209
|
*
|
|
4210
4210
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
@@ -4219,7 +4219,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4219
4219
|
int __pyx_t_1;
|
|
4220
4220
|
__Pyx_RefNannySetupContext("get_array_base", 0);
|
|
4221
4221
|
|
|
4222
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4222
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1015
|
|
4223
4223
|
*
|
|
4224
4224
|
* cdef inline object get_array_base(ndarray arr):
|
|
4225
4225
|
* base = PyArray_BASE(arr) # <<<<<<<<<<<<<<
|
|
@@ -4228,7 +4228,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4228
4228
|
*/
|
|
4229
4229
|
__pyx_v_base = PyArray_BASE(__pyx_v_arr);
|
|
4230
4230
|
|
|
4231
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4231
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1016
|
|
4232
4232
|
* cdef inline object get_array_base(ndarray arr):
|
|
4233
4233
|
* base = PyArray_BASE(arr)
|
|
4234
4234
|
* if base is NULL: # <<<<<<<<<<<<<<
|
|
@@ -4238,7 +4238,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4238
4238
|
__pyx_t_1 = (__pyx_v_base == NULL);
|
|
4239
4239
|
if (__pyx_t_1) {
|
|
4240
4240
|
|
|
4241
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4241
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1017
|
|
4242
4242
|
* base = PyArray_BASE(arr)
|
|
4243
4243
|
* if base is NULL:
|
|
4244
4244
|
* return None # <<<<<<<<<<<<<<
|
|
@@ -4249,7 +4249,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4249
4249
|
__pyx_r = Py_None; __Pyx_INCREF(Py_None);
|
|
4250
4250
|
goto __pyx_L0;
|
|
4251
4251
|
|
|
4252
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4252
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1016
|
|
4253
4253
|
* cdef inline object get_array_base(ndarray arr):
|
|
4254
4254
|
* base = PyArray_BASE(arr)
|
|
4255
4255
|
* if base is NULL: # <<<<<<<<<<<<<<
|
|
@@ -4258,7 +4258,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4258
4258
|
*/
|
|
4259
4259
|
}
|
|
4260
4260
|
|
|
4261
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4261
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1018
|
|
4262
4262
|
* if base is NULL:
|
|
4263
4263
|
* return None
|
|
4264
4264
|
* return <object>base # <<<<<<<<<<<<<<
|
|
@@ -4270,7 +4270,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4270
4270
|
__pyx_r = ((PyObject *)__pyx_v_base);
|
|
4271
4271
|
goto __pyx_L0;
|
|
4272
4272
|
|
|
4273
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4273
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1014
|
|
4274
4274
|
* PyArray_SetBaseObject(arr, base)
|
|
4275
4275
|
*
|
|
4276
4276
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
@@ -4285,7 +4285,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
4285
4285
|
return __pyx_r;
|
|
4286
4286
|
}
|
|
4287
4287
|
|
|
4288
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4288
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1022
|
|
4289
4289
|
* # Versions of the import_* functions which are more suitable for
|
|
4290
4290
|
* # Cython code.
|
|
4291
4291
|
* cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4312,7 +4312,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4312
4312
|
int __pyx_clineno = 0;
|
|
4313
4313
|
__Pyx_RefNannySetupContext("import_array", 0);
|
|
4314
4314
|
|
|
4315
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4315
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1023
|
|
4316
4316
|
* # Cython code.
|
|
4317
4317
|
* cdef inline int import_array() except -1:
|
|
4318
4318
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4328,7 +4328,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4328
4328
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
4329
4329
|
/*try:*/ {
|
|
4330
4330
|
|
|
4331
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4331
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1024
|
|
4332
4332
|
* cdef inline int import_array() except -1:
|
|
4333
4333
|
* try:
|
|
4334
4334
|
* __pyx_import_array() # <<<<<<<<<<<<<<
|
|
@@ -4337,7 +4337,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4337
4337
|
*/
|
|
4338
4338
|
__pyx_t_4 = _import_array(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1024, __pyx_L3_error)
|
|
4339
4339
|
|
|
4340
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4340
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1023
|
|
4341
4341
|
* # Cython code.
|
|
4342
4342
|
* cdef inline int import_array() except -1:
|
|
4343
4343
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4351,7 +4351,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4351
4351
|
goto __pyx_L8_try_end;
|
|
4352
4352
|
__pyx_L3_error:;
|
|
4353
4353
|
|
|
4354
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4354
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1025
|
|
4355
4355
|
* try:
|
|
4356
4356
|
* __pyx_import_array()
|
|
4357
4357
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -4366,7 +4366,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4366
4366
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
4367
4367
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
4368
4368
|
|
|
4369
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4369
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1026
|
|
4370
4370
|
* __pyx_import_array()
|
|
4371
4371
|
* except Exception:
|
|
4372
4372
|
* raise ImportError("numpy._core.multiarray failed to import") # <<<<<<<<<<<<<<
|
|
@@ -4391,7 +4391,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4391
4391
|
}
|
|
4392
4392
|
goto __pyx_L5_except_error;
|
|
4393
4393
|
|
|
4394
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4394
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1023
|
|
4395
4395
|
* # Cython code.
|
|
4396
4396
|
* cdef inline int import_array() except -1:
|
|
4397
4397
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4407,7 +4407,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4407
4407
|
__pyx_L8_try_end:;
|
|
4408
4408
|
}
|
|
4409
4409
|
|
|
4410
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4410
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1022
|
|
4411
4411
|
* # Versions of the import_* functions which are more suitable for
|
|
4412
4412
|
* # Cython code.
|
|
4413
4413
|
* cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4432,7 +4432,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
4432
4432
|
return __pyx_r;
|
|
4433
4433
|
}
|
|
4434
4434
|
|
|
4435
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4435
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1028
|
|
4436
4436
|
* raise ImportError("numpy._core.multiarray failed to import")
|
|
4437
4437
|
*
|
|
4438
4438
|
* cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4459,7 +4459,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4459
4459
|
int __pyx_clineno = 0;
|
|
4460
4460
|
__Pyx_RefNannySetupContext("import_umath", 0);
|
|
4461
4461
|
|
|
4462
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4462
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1029
|
|
4463
4463
|
*
|
|
4464
4464
|
* cdef inline int import_umath() except -1:
|
|
4465
4465
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4475,7 +4475,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4475
4475
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
4476
4476
|
/*try:*/ {
|
|
4477
4477
|
|
|
4478
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4478
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1030
|
|
4479
4479
|
* cdef inline int import_umath() except -1:
|
|
4480
4480
|
* try:
|
|
4481
4481
|
* _import_umath() # <<<<<<<<<<<<<<
|
|
@@ -4484,7 +4484,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4484
4484
|
*/
|
|
4485
4485
|
__pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1030, __pyx_L3_error)
|
|
4486
4486
|
|
|
4487
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4487
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1029
|
|
4488
4488
|
*
|
|
4489
4489
|
* cdef inline int import_umath() except -1:
|
|
4490
4490
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4498,7 +4498,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4498
4498
|
goto __pyx_L8_try_end;
|
|
4499
4499
|
__pyx_L3_error:;
|
|
4500
4500
|
|
|
4501
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4501
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1031
|
|
4502
4502
|
* try:
|
|
4503
4503
|
* _import_umath()
|
|
4504
4504
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -4513,7 +4513,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4513
4513
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
4514
4514
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
4515
4515
|
|
|
4516
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4516
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1032
|
|
4517
4517
|
* _import_umath()
|
|
4518
4518
|
* except Exception:
|
|
4519
4519
|
* raise ImportError("numpy._core.umath failed to import") # <<<<<<<<<<<<<<
|
|
@@ -4538,7 +4538,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4538
4538
|
}
|
|
4539
4539
|
goto __pyx_L5_except_error;
|
|
4540
4540
|
|
|
4541
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4541
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1029
|
|
4542
4542
|
*
|
|
4543
4543
|
* cdef inline int import_umath() except -1:
|
|
4544
4544
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4554,7 +4554,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4554
4554
|
__pyx_L8_try_end:;
|
|
4555
4555
|
}
|
|
4556
4556
|
|
|
4557
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4557
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1028
|
|
4558
4558
|
* raise ImportError("numpy._core.multiarray failed to import")
|
|
4559
4559
|
*
|
|
4560
4560
|
* cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4579,7 +4579,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
4579
4579
|
return __pyx_r;
|
|
4580
4580
|
}
|
|
4581
4581
|
|
|
4582
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4582
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1034
|
|
4583
4583
|
* raise ImportError("numpy._core.umath failed to import")
|
|
4584
4584
|
*
|
|
4585
4585
|
* cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4606,7 +4606,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4606
4606
|
int __pyx_clineno = 0;
|
|
4607
4607
|
__Pyx_RefNannySetupContext("import_ufunc", 0);
|
|
4608
4608
|
|
|
4609
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4609
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1035
|
|
4610
4610
|
*
|
|
4611
4611
|
* cdef inline int import_ufunc() except -1:
|
|
4612
4612
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4622,7 +4622,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4622
4622
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
4623
4623
|
/*try:*/ {
|
|
4624
4624
|
|
|
4625
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4625
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1036
|
|
4626
4626
|
* cdef inline int import_ufunc() except -1:
|
|
4627
4627
|
* try:
|
|
4628
4628
|
* _import_umath() # <<<<<<<<<<<<<<
|
|
@@ -4631,7 +4631,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4631
4631
|
*/
|
|
4632
4632
|
__pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1036, __pyx_L3_error)
|
|
4633
4633
|
|
|
4634
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4634
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1035
|
|
4635
4635
|
*
|
|
4636
4636
|
* cdef inline int import_ufunc() except -1:
|
|
4637
4637
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4645,7 +4645,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4645
4645
|
goto __pyx_L8_try_end;
|
|
4646
4646
|
__pyx_L3_error:;
|
|
4647
4647
|
|
|
4648
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4648
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1037
|
|
4649
4649
|
* try:
|
|
4650
4650
|
* _import_umath()
|
|
4651
4651
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -4660,7 +4660,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4660
4660
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
4661
4661
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
4662
4662
|
|
|
4663
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4663
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1038
|
|
4664
4664
|
* _import_umath()
|
|
4665
4665
|
* except Exception:
|
|
4666
4666
|
* raise ImportError("numpy._core.umath failed to import") # <<<<<<<<<<<<<<
|
|
@@ -4685,7 +4685,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4685
4685
|
}
|
|
4686
4686
|
goto __pyx_L5_except_error;
|
|
4687
4687
|
|
|
4688
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4688
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1035
|
|
4689
4689
|
*
|
|
4690
4690
|
* cdef inline int import_ufunc() except -1:
|
|
4691
4691
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -4701,7 +4701,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4701
4701
|
__pyx_L8_try_end:;
|
|
4702
4702
|
}
|
|
4703
4703
|
|
|
4704
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4704
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1034
|
|
4705
4705
|
* raise ImportError("numpy._core.umath failed to import")
|
|
4706
4706
|
*
|
|
4707
4707
|
* cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
|
|
@@ -4726,7 +4726,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4726
4726
|
return __pyx_r;
|
|
4727
4727
|
}
|
|
4728
4728
|
|
|
4729
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4729
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1041
|
|
4730
4730
|
*
|
|
4731
4731
|
*
|
|
4732
4732
|
* cdef inline bint is_timedelta64_object(object obj) noexcept: # <<<<<<<<<<<<<<
|
|
@@ -4737,7 +4737,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
4737
4737
|
static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_obj) {
|
|
4738
4738
|
int __pyx_r;
|
|
4739
4739
|
|
|
4740
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4740
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1053
|
|
4741
4741
|
* bool
|
|
4742
4742
|
* """
|
|
4743
4743
|
* return PyObject_TypeCheck(obj, &PyTimedeltaArrType_Type) # <<<<<<<<<<<<<<
|
|
@@ -4747,7 +4747,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
4747
4747
|
__pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyTimedeltaArrType_Type));
|
|
4748
4748
|
goto __pyx_L0;
|
|
4749
4749
|
|
|
4750
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4750
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1041
|
|
4751
4751
|
*
|
|
4752
4752
|
*
|
|
4753
4753
|
* cdef inline bint is_timedelta64_object(object obj) noexcept: # <<<<<<<<<<<<<<
|
|
@@ -4760,7 +4760,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
4760
4760
|
return __pyx_r;
|
|
4761
4761
|
}
|
|
4762
4762
|
|
|
4763
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4763
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1056
|
|
4764
4764
|
*
|
|
4765
4765
|
*
|
|
4766
4766
|
* cdef inline bint is_datetime64_object(object obj) noexcept: # <<<<<<<<<<<<<<
|
|
@@ -4771,7 +4771,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
4771
4771
|
static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_obj) {
|
|
4772
4772
|
int __pyx_r;
|
|
4773
4773
|
|
|
4774
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4774
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1068
|
|
4775
4775
|
* bool
|
|
4776
4776
|
* """
|
|
4777
4777
|
* return PyObject_TypeCheck(obj, &PyDatetimeArrType_Type) # <<<<<<<<<<<<<<
|
|
@@ -4781,7 +4781,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
4781
4781
|
__pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyDatetimeArrType_Type));
|
|
4782
4782
|
goto __pyx_L0;
|
|
4783
4783
|
|
|
4784
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4784
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1056
|
|
4785
4785
|
*
|
|
4786
4786
|
*
|
|
4787
4787
|
* cdef inline bint is_datetime64_object(object obj) noexcept: # <<<<<<<<<<<<<<
|
|
@@ -4794,7 +4794,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
4794
4794
|
return __pyx_r;
|
|
4795
4795
|
}
|
|
4796
4796
|
|
|
4797
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4797
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1071
|
|
4798
4798
|
*
|
|
4799
4799
|
*
|
|
4800
4800
|
* cdef inline npy_datetime get_datetime64_value(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -4805,7 +4805,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
4805
4805
|
static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *__pyx_v_obj) {
|
|
4806
4806
|
npy_datetime __pyx_r;
|
|
4807
4807
|
|
|
4808
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4808
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1078
|
|
4809
4809
|
* also needed. That can be found using `get_datetime64_unit`.
|
|
4810
4810
|
* """
|
|
4811
4811
|
* return (<PyDatetimeScalarObject*>obj).obval # <<<<<<<<<<<<<<
|
|
@@ -4815,7 +4815,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
4815
4815
|
__pyx_r = ((PyDatetimeScalarObject *)__pyx_v_obj)->obval;
|
|
4816
4816
|
goto __pyx_L0;
|
|
4817
4817
|
|
|
4818
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4818
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1071
|
|
4819
4819
|
*
|
|
4820
4820
|
*
|
|
4821
4821
|
* cdef inline npy_datetime get_datetime64_value(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -4828,7 +4828,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
4828
4828
|
return __pyx_r;
|
|
4829
4829
|
}
|
|
4830
4830
|
|
|
4831
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4831
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1081
|
|
4832
4832
|
*
|
|
4833
4833
|
*
|
|
4834
4834
|
* cdef inline npy_timedelta get_timedelta64_value(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -4839,7 +4839,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
4839
4839
|
static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject *__pyx_v_obj) {
|
|
4840
4840
|
npy_timedelta __pyx_r;
|
|
4841
4841
|
|
|
4842
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4842
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1085
|
|
4843
4843
|
* returns the int64 value underlying scalar numpy timedelta64 object
|
|
4844
4844
|
* """
|
|
4845
4845
|
* return (<PyTimedeltaScalarObject*>obj).obval # <<<<<<<<<<<<<<
|
|
@@ -4849,7 +4849,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
4849
4849
|
__pyx_r = ((PyTimedeltaScalarObject *)__pyx_v_obj)->obval;
|
|
4850
4850
|
goto __pyx_L0;
|
|
4851
4851
|
|
|
4852
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4852
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1081
|
|
4853
4853
|
*
|
|
4854
4854
|
*
|
|
4855
4855
|
* cdef inline npy_timedelta get_timedelta64_value(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -4862,7 +4862,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
4862
4862
|
return __pyx_r;
|
|
4863
4863
|
}
|
|
4864
4864
|
|
|
4865
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4865
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1088
|
|
4866
4866
|
*
|
|
4867
4867
|
*
|
|
4868
4868
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -4873,7 +4873,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
4873
4873
|
static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObject *__pyx_v_obj) {
|
|
4874
4874
|
NPY_DATETIMEUNIT __pyx_r;
|
|
4875
4875
|
|
|
4876
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4876
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1092
|
|
4877
4877
|
* returns the unit part of the dtype for a numpy datetime64 object.
|
|
4878
4878
|
* """
|
|
4879
4879
|
* return <NPY_DATETIMEUNIT>(<PyDatetimeScalarObject*>obj).obmeta.base # <<<<<<<<<<<<<<
|
|
@@ -4883,7 +4883,7 @@ static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObjec
|
|
|
4883
4883
|
__pyx_r = ((NPY_DATETIMEUNIT)((PyDatetimeScalarObject *)__pyx_v_obj)->obmeta.base);
|
|
4884
4884
|
goto __pyx_L0;
|
|
4885
4885
|
|
|
4886
|
-
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-
|
|
4886
|
+
/* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-4xiaq35t/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1088
|
|
4887
4887
|
*
|
|
4888
4888
|
*
|
|
4889
4889
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) noexcept nogil: # <<<<<<<<<<<<<<
|
|
@@ -5187,7 +5187,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5187
5187
|
* if not isinstance(seqdata, SequenceData):
|
|
5188
5188
|
* raise ValueError("[x] Seqdata must be a pandas DataFrame wrapped in a SequenceData object.") # <<<<<<<<<<<<<<
|
|
5189
5189
|
*
|
|
5190
|
-
* cdef
|
|
5190
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=1] weights
|
|
5191
5191
|
*/
|
|
5192
5192
|
__pyx_t_1 = NULL;
|
|
5193
5193
|
__Pyx_INCREF(__pyx_builtin_ValueError);
|
|
@@ -5216,7 +5216,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5216
5216
|
|
|
5217
5217
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":24
|
|
5218
5218
|
*
|
|
5219
|
-
* cdef
|
|
5219
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=1] weights
|
|
5220
5220
|
* if weighted: # <<<<<<<<<<<<<<
|
|
5221
5221
|
* weights = np.asarray(seqdata.weights, dtype=np.float64)
|
|
5222
5222
|
* else:
|
|
@@ -5224,7 +5224,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5224
5224
|
if (__pyx_v_weighted) {
|
|
5225
5225
|
|
|
5226
5226
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":25
|
|
5227
|
-
* cdef
|
|
5227
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=1] weights
|
|
5228
5228
|
* if weighted:
|
|
5229
5229
|
* weights = np.asarray(seqdata.weights, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
5230
5230
|
* else:
|
|
@@ -5292,7 +5292,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5292
5292
|
|
|
5293
5293
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":24
|
|
5294
5294
|
*
|
|
5295
|
-
* cdef
|
|
5295
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=1] weights
|
|
5296
5296
|
* if weighted: # <<<<<<<<<<<<<<
|
|
5297
5297
|
* weights = np.asarray(seqdata.weights, dtype=np.float64)
|
|
5298
5298
|
* else:
|
|
@@ -5573,7 +5573,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5573
5573
|
*
|
|
5574
5574
|
* # convert df to NumPy 2D array of ints
|
|
5575
5575
|
* seq_mat = df.to_numpy(dtype=np.float64) # <<<<<<<<<<<<<<
|
|
5576
|
-
* cdef
|
|
5576
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=2] seq_mat_mv = seq_mat
|
|
5577
5577
|
*
|
|
5578
5578
|
*/
|
|
5579
5579
|
__pyx_t_1 = __pyx_v_df;
|
|
@@ -5602,7 +5602,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5602
5602
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":48
|
|
5603
5603
|
* # convert df to NumPy 2D array of ints
|
|
5604
5604
|
* seq_mat = df.to_numpy(dtype=np.float64)
|
|
5605
|
-
* cdef
|
|
5605
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=2] seq_mat_mv = seq_mat # <<<<<<<<<<<<<<
|
|
5606
5606
|
*
|
|
5607
5607
|
* if time_varying:
|
|
5608
5608
|
*/
|
|
@@ -5621,7 +5621,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
5621
5621
|
__pyx_t_8 = 0;
|
|
5622
5622
|
|
|
5623
5623
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":50
|
|
5624
|
-
* cdef
|
|
5624
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=2] seq_mat_mv = seq_mat
|
|
5625
5625
|
*
|
|
5626
5626
|
* if time_varying: # <<<<<<<<<<<<<<
|
|
5627
5627
|
* tmat = np.zeros((num_transition, _size, _size), dtype=np.float64)
|
|
@@ -6040,7 +6040,7 @@ static PyObject *__pyx_pf_8sequenzo_22dissimilarity_measures_5utils_37get_sm_tra
|
|
|
6040
6040
|
__Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0;
|
|
6041
6041
|
|
|
6042
6042
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":50
|
|
6043
|
-
* cdef
|
|
6043
|
+
* cdef cnp.ndarray[cnp.float64_t, ndim=2] seq_mat_mv = seq_mat
|
|
6044
6044
|
*
|
|
6045
6045
|
* if time_varying: # <<<<<<<<<<<<<<
|
|
6046
6046
|
* tmat = np.zeros((num_transition, _size, _size), dtype=np.float64)
|
|
@@ -7028,9 +7028,9 @@ __Pyx_RefNannySetupContext("PyInit_get_sm_trate_substitution_cost_matrix", 0);
|
|
|
7028
7028
|
/*--- Execution code ---*/
|
|
7029
7029
|
|
|
7030
7030
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":2
|
|
7031
|
-
* # cython: boundscheck=False, wraparound=False
|
|
7031
|
+
* # cython: boundscheck=False, wraparound=False, np_import_array=True
|
|
7032
7032
|
* import numpy as np # <<<<<<<<<<<<<<
|
|
7033
|
-
* cimport numpy as
|
|
7033
|
+
* cimport numpy as cnp
|
|
7034
7034
|
*
|
|
7035
7035
|
*/
|
|
7036
7036
|
__pyx_t_2 = __Pyx_ImportDottedModule(__pyx_mstate_global->__pyx_n_u_numpy, NULL); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 2, __pyx_L1_error)
|
|
@@ -7039,7 +7039,7 @@ __Pyx_RefNannySetupContext("PyInit_get_sm_trate_substitution_cost_matrix", 0);
|
|
|
7039
7039
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
7040
7040
|
|
|
7041
7041
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":5
|
|
7042
|
-
* cimport numpy as
|
|
7042
|
+
* cimport numpy as cnp
|
|
7043
7043
|
*
|
|
7044
7044
|
* import pandas as pd # <<<<<<<<<<<<<<
|
|
7045
7045
|
* from libc.math cimport isnan
|
|
@@ -7111,9 +7111,9 @@ __Pyx_RefNannySetupContext("PyInit_get_sm_trate_substitution_cost_matrix", 0);
|
|
|
7111
7111
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
7112
7112
|
|
|
7113
7113
|
/* "sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.pyx":1
|
|
7114
|
-
* # cython: boundscheck=False, wraparound=False # <<<<<<<<<<<<<<
|
|
7114
|
+
* # cython: boundscheck=False, wraparound=False, np_import_array=True # <<<<<<<<<<<<<<
|
|
7115
7115
|
* import numpy as np
|
|
7116
|
-
* cimport numpy as
|
|
7116
|
+
* cimport numpy as cnp
|
|
7117
7117
|
*/
|
|
7118
7118
|
__pyx_t_5 = __Pyx_PyDict_NewPresized(0); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 1, __pyx_L1_error)
|
|
7119
7119
|
__Pyx_GOTREF(__pyx_t_5);
|