scitex 2.1.1__py3-none-any.whl

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Files changed (2926) hide show
  1. scitex/.claude/mcp-config.json +42 -0
  2. scitex/.mcp.json +46 -0
  3. scitex/__init__.py +137 -0
  4. scitex/__main__.py +135 -0
  5. scitex/__version__.py +14 -0
  6. scitex/_optional_deps.py +140 -0
  7. scitex/_sh.py +18 -0
  8. scitex/ai/README.md +295 -0
  9. scitex/ai/__init__.py +69 -0
  10. scitex/ai/_gen_ai/_Anthropic.py +171 -0
  11. scitex/ai/_gen_ai/_BaseGenAI.py +336 -0
  12. scitex/ai/_gen_ai/_DeepSeek.py +183 -0
  13. scitex/ai/_gen_ai/_Google.py +161 -0
  14. scitex/ai/_gen_ai/_Groq.py +97 -0
  15. scitex/ai/_gen_ai/_Llama.py +142 -0
  16. scitex/ai/_gen_ai/_OpenAI.py +230 -0
  17. scitex/ai/_gen_ai/_PARAMS.py +551 -0
  18. scitex/ai/_gen_ai/_Perplexity.py +191 -0
  19. scitex/ai/_gen_ai/__init__.py +43 -0
  20. scitex/ai/_gen_ai/_calc_cost.py +78 -0
  21. scitex/ai/_gen_ai/_format_output_func.py +183 -0
  22. scitex/ai/_gen_ai/_genai_factory.py +71 -0
  23. scitex/ai/activation/__init__.py +8 -0
  24. scitex/ai/activation/_define.py +11 -0
  25. scitex/ai/classification/Classifier.py +131 -0
  26. scitex/ai/classification/CrossValidationExperiment.py +374 -0
  27. scitex/ai/classification/README.md +251 -0
  28. scitex/ai/classification/__init__.py +46 -0
  29. scitex/ai/classification/examples/timeseries_cv_demo.py +400 -0
  30. scitex/ai/classification/examples/verify_multi/config.json +13 -0
  31. scitex/ai/classification/examples/verify_multi/multi_task_comparison.md +20 -0
  32. scitex/ai/classification/examples/verify_multi/multi_task_validation.json +103 -0
  33. scitex/ai/classification/examples/verify_multi/paper_export/README.md +20 -0
  34. scitex/ai/classification/examples/verify_multi/paper_export/raw_results.json +174 -0
  35. scitex/ai/classification/examples/verify_multi/task1/metadata.json +56 -0
  36. scitex/ai/classification/examples/verify_multi/task1/paper_export/README.md +20 -0
  37. scitex/ai/classification/examples/verify_multi/task1/paper_export/raw_results.json +93 -0
  38. scitex/ai/classification/examples/verify_multi/task1/paper_export/summary_table.tex +15 -0
  39. scitex/ai/classification/examples/verify_multi/task1/report.md +31 -0
  40. scitex/ai/classification/examples/verify_multi/task1/validation_report.json +47 -0
  41. scitex/ai/classification/examples/verify_multi/task2/metadata.json +56 -0
  42. scitex/ai/classification/examples/verify_multi/task2/paper_export/README.md +20 -0
  43. scitex/ai/classification/examples/verify_multi/task2/paper_export/raw_results.json +93 -0
  44. scitex/ai/classification/examples/verify_multi/task2/paper_export/summary_table.tex +15 -0
  45. scitex/ai/classification/examples/verify_multi/task2/report.md +31 -0
  46. scitex/ai/classification/examples/verify_multi/task2/validation_report.json +47 -0
  47. scitex/ai/classification/examples/verify_test/metadata.json +62 -0
  48. scitex/ai/classification/examples/verify_test/paper_export/README.md +20 -0
  49. scitex/ai/classification/examples/verify_test/paper_export/raw_results.json +131 -0
  50. scitex/ai/classification/examples/verify_test/paper_export/summary_table.tex +15 -0
  51. scitex/ai/classification/examples/verify_test/report.md +31 -0
  52. scitex/ai/classification/examples/verify_test/validation_report.json +52 -0
  53. scitex/ai/classification/reporters/_BaseClassificationReporter.py +281 -0
  54. scitex/ai/classification/reporters/_ClassificationReporter.py +773 -0
  55. scitex/ai/classification/reporters/_MultiClassificationReporter.py +406 -0
  56. scitex/ai/classification/reporters/_SingleClassificationReporter.py +1834 -0
  57. scitex/ai/classification/reporters/__init__.py +11 -0
  58. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +1028 -0
  59. scitex/ai/classification/reporters/reporter_utils/__init__.py +80 -0
  60. scitex/ai/classification/reporters/reporter_utils/aggregation.py +457 -0
  61. scitex/ai/classification/reporters/reporter_utils/data_models.py +313 -0
  62. scitex/ai/classification/reporters/reporter_utils/reporting.py +1056 -0
  63. scitex/ai/classification/reporters/reporter_utils/storage.py +221 -0
  64. scitex/ai/classification/reporters/reporter_utils/validation.py +395 -0
  65. scitex/ai/classification/timeseries/README.md +313 -0
  66. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +568 -0
  67. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +688 -0
  68. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +139 -0
  69. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +1716 -0
  70. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +1685 -0
  71. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +84 -0
  72. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +610 -0
  73. scitex/ai/classification/timeseries/__init__.py +39 -0
  74. scitex/ai/classification/timeseries/_normalize_timestamp.py +436 -0
  75. scitex/ai/classification/timeseries/run_all.sh +30 -0
  76. scitex/ai/clustering/__init__.py +11 -0
  77. scitex/ai/clustering/_pca.py +115 -0
  78. scitex/ai/clustering/_umap.py +376 -0
  79. scitex/ai/feature_extraction/__init__.py +56 -0
  80. scitex/ai/feature_extraction/vit.py +149 -0
  81. scitex/ai/feature_selection/__init__.py +30 -0
  82. scitex/ai/feature_selection/feature_selection.py +364 -0
  83. scitex/ai/loss/_L1L2Losses.py +34 -0
  84. scitex/ai/loss/__init__.py +12 -0
  85. scitex/ai/loss/multi_task_loss.py +47 -0
  86. scitex/ai/metrics/__init__.py +56 -0
  87. scitex/ai/metrics/_calc_bacc.py +61 -0
  88. scitex/ai/metrics/_calc_bacc_from_conf_mat.py +38 -0
  89. scitex/ai/metrics/_calc_clf_report.py +78 -0
  90. scitex/ai/metrics/_calc_conf_mat.py +93 -0
  91. scitex/ai/metrics/_calc_feature_importance.py +183 -0
  92. scitex/ai/metrics/_calc_mcc.py +61 -0
  93. scitex/ai/metrics/_calc_pre_rec_auc.py +116 -0
  94. scitex/ai/metrics/_calc_roc_auc.py +110 -0
  95. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +490 -0
  96. scitex/ai/metrics/_calc_silhouette_score.py +503 -0
  97. scitex/ai/metrics/_normalize_labels.py +83 -0
  98. scitex/ai/optim/MIGRATION.md +43 -0
  99. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/LICENSE +201 -0
  100. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/README.md +80 -0
  101. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/__init__.py +0 -0
  102. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/__init__.py +3 -0
  103. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +207 -0
  104. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +238 -0
  105. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +215 -0
  106. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/rangerqh.py +184 -0
  107. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger-init.jpg +0 -0
  108. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger-with-gc-options.jpg +0 -0
  109. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/setup.py +24 -0
  110. scitex/ai/optim/__init__.py +13 -0
  111. scitex/ai/optim/_get_set.py +31 -0
  112. scitex/ai/optim/_optimizers.py +71 -0
  113. scitex/ai/plt/__init__.py +60 -0
  114. scitex/ai/plt/_plot_conf_mat.py +663 -0
  115. scitex/ai/plt/_plot_feature_importance.py +323 -0
  116. scitex/ai/plt/_plot_learning_curve.py +345 -0
  117. scitex/ai/plt/_plot_optuna_study.py +225 -0
  118. scitex/ai/plt/_plot_pre_rec_curve.py +290 -0
  119. scitex/ai/plt/_plot_roc_curve.py +255 -0
  120. scitex/ai/sampling/undersample.py +43 -0
  121. scitex/ai/sk/__init__.py +11 -0
  122. scitex/ai/sk/_clf.py +58 -0
  123. scitex/ai/sk/_to_sktime.py +100 -0
  124. scitex/ai/sklearn/__init__.py +26 -0
  125. scitex/ai/sklearn/clf.py +58 -0
  126. scitex/ai/sklearn/to_sktime.py +100 -0
  127. scitex/ai/training/_EarlyStopping.py +149 -0
  128. scitex/ai/training/_LearningCurveLogger.py +539 -0
  129. scitex/ai/training/__init__.py +7 -0
  130. scitex/ai/training/legacy/early_stopping.py +150 -0
  131. scitex/ai/training/legacy/learning_curve_logger.py +557 -0
  132. scitex/ai/utils/__init__.py +22 -0
  133. scitex/ai/utils/_check_params.py +50 -0
  134. scitex/ai/utils/_default_dataset.py +46 -0
  135. scitex/ai/utils/_format_samples_for_sktime.py +26 -0
  136. scitex/ai/utils/_label_encoder.py +134 -0
  137. scitex/ai/utils/_merge_labels.py +22 -0
  138. scitex/ai/utils/_sliding_window_data_augmentation.py +11 -0
  139. scitex/ai/utils/_under_sample.py +51 -0
  140. scitex/ai/utils/_verify_n_gpus.py +16 -0
  141. scitex/ai/utils/grid_search.py +148 -0
  142. scitex/ai/viewed-ai.md +4984 -0
  143. scitex/benchmark/__init__.py +52 -0
  144. scitex/benchmark/benchmark.py +400 -0
  145. scitex/benchmark/monitor.py +370 -0
  146. scitex/benchmark/profiler.py +297 -0
  147. scitex/browser/ARCHITECTURE_PROPOSAL.md +795 -0
  148. scitex/browser/INTERACTIVE_COLLABORATION.md +782 -0
  149. scitex/browser/README.md +167 -0
  150. scitex/browser/SAFE_IMPLEMENTATION_PLAN.md +363 -0
  151. scitex/browser/SHARED_BROWSER_SESSION.md +652 -0
  152. scitex/browser/TODO.md +11 -0
  153. scitex/browser/__init__.py +48 -0
  154. scitex/browser/automation/CookieHandler.py +216 -0
  155. scitex/browser/automation/__init__.py +7 -0
  156. scitex/browser/collaboration/CLIENTSERVER_ARCHITECTURE.md +165 -0
  157. scitex/browser/collaboration/INTERACTION_STRATEGY.md +547 -0
  158. scitex/browser/collaboration/NON_INTERFERING_LOGIC.md +730 -0
  159. scitex/browser/collaboration/__init__.py +55 -0
  160. scitex/browser/collaboration/auth_helpers.py +94 -0
  161. scitex/browser/collaboration/collaborative_agent.py +136 -0
  162. scitex/browser/collaboration/credential_manager.py +188 -0
  163. scitex/browser/collaboration/interactive_panel.py +400 -0
  164. scitex/browser/collaboration/persistent_browser.py +170 -0
  165. scitex/browser/collaboration/shared_session.py +383 -0
  166. scitex/browser/collaboration/standard_interactions.py +246 -0
  167. scitex/browser/collaboration/visual_feedback.py +181 -0
  168. scitex/browser/core/BrowserMixin.py +326 -0
  169. scitex/browser/core/ChromeProfileManager.py +446 -0
  170. scitex/browser/core/__init__.py +9 -0
  171. scitex/browser/debugging/__init__.py +18 -0
  172. scitex/browser/debugging/_browser_logger.py +657 -0
  173. scitex/browser/debugging/_highlight_element.py +143 -0
  174. scitex/browser/debugging/_show_grid.py +154 -0
  175. scitex/browser/docs/ABOUT_PLAYWRIGHT.md +49 -0
  176. scitex/browser/interaction/__init__.py +24 -0
  177. scitex/browser/interaction/click_center.py +149 -0
  178. scitex/browser/interaction/click_with_fallbacks.py +206 -0
  179. scitex/browser/interaction/close_popups.py +498 -0
  180. scitex/browser/interaction/fill_with_fallbacks.py +209 -0
  181. scitex/browser/pdf/__init__.py +14 -0
  182. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +200 -0
  183. scitex/browser/pdf/detect_chrome_pdf_viewer.py +198 -0
  184. scitex/browser/remote/CaptchaHandler.py +434 -0
  185. scitex/browser/remote/ZenRowsAPIClient.py +347 -0
  186. scitex/browser/remote/ZenRowsBrowserManager.py +570 -0
  187. scitex/browser/remote/__init__.py +11 -0
  188. scitex/browser/stealth/HumanBehavior.py +344 -0
  189. scitex/browser/stealth/StealthManager.py +1008 -0
  190. scitex/browser/stealth/__init__.py +9 -0
  191. scitex/browser/template.py +122 -0
  192. scitex/capture/README.md +284 -0
  193. scitex/capture/TODO.md +40 -0
  194. scitex/capture/__init__.py +110 -0
  195. scitex/capture/__main__.py +25 -0
  196. scitex/capture/capture.py +848 -0
  197. scitex/capture/cli.py +233 -0
  198. scitex/capture/gif.py +344 -0
  199. scitex/capture/mcp_server.py +961 -0
  200. scitex/capture/powershell/capture_all_desktops.ps1 +79 -0
  201. scitex/capture/powershell/capture_all_monitors.ps1 +63 -0
  202. scitex/capture/powershell/capture_single_monitor.ps1 +77 -0
  203. scitex/capture/powershell/capture_url.ps1 +170 -0
  204. scitex/capture/powershell/capture_window_by_handle.ps1 +129 -0
  205. scitex/capture/powershell/detect_monitors_and_desktops.ps1 +143 -0
  206. scitex/capture/powershell/enumerate_virtual_desktops.ps1 +60 -0
  207. scitex/capture/session.py +70 -0
  208. scitex/capture/utils.py +705 -0
  209. scitex/cli/__init__.py +17 -0
  210. scitex/cli/cloud.py +531 -0
  211. scitex/cli/main.py +42 -0
  212. scitex/cli/scholar.py +280 -0
  213. scitex/context/__init__.py +9 -0
  214. scitex/context/_suppress_output.py +40 -0
  215. scitex/db/README.md +281 -0
  216. scitex/db/_BaseMixins/_BaseBackupMixin.py +30 -0
  217. scitex/db/_BaseMixins/_BaseBatchMixin.py +31 -0
  218. scitex/db/_BaseMixins/_BaseBlobMixin.py +81 -0
  219. scitex/db/_BaseMixins/_BaseConnectionMixin.py +43 -0
  220. scitex/db/_BaseMixins/_BaseImportExportMixin.py +39 -0
  221. scitex/db/_BaseMixins/_BaseIndexMixin.py +29 -0
  222. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +33 -0
  223. scitex/db/_BaseMixins/_BaseQueryMixin.py +52 -0
  224. scitex/db/_BaseMixins/_BaseRowMixin.py +32 -0
  225. scitex/db/_BaseMixins/_BaseSchemaMixin.py +44 -0
  226. scitex/db/_BaseMixins/_BaseTableMixin.py +66 -0
  227. scitex/db/_BaseMixins/_BaseTransactionMixin.py +52 -0
  228. scitex/db/_BaseMixins/__init__.py +30 -0
  229. scitex/db/__init__.py +41 -0
  230. scitex/db/__main__.py +75 -0
  231. scitex/db/_check_health.py +381 -0
  232. scitex/db/_delete_duplicates.py +36 -0
  233. scitex/db/_inspect.py +384 -0
  234. scitex/db/_inspect_optimized.py +301 -0
  235. scitex/db/_postgresql/_PostgreSQL.py +126 -0
  236. scitex/db/_postgresql/_PostgreSQLMixins/_BackupMixin.py +166 -0
  237. scitex/db/_postgresql/_PostgreSQLMixins/_BatchMixin.py +82 -0
  238. scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +231 -0
  239. scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +92 -0
  240. scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +59 -0
  241. scitex/db/_postgresql/_PostgreSQLMixins/_IndexMixin.py +64 -0
  242. scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +175 -0
  243. scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +108 -0
  244. scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +75 -0
  245. scitex/db/_postgresql/_PostgreSQLMixins/_SchemaMixin.py +126 -0
  246. scitex/db/_postgresql/_PostgreSQLMixins/_TableMixin.py +176 -0
  247. scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +57 -0
  248. scitex/db/_postgresql/_PostgreSQLMixins/__init__.py +34 -0
  249. scitex/db/_postgresql/__init__.py +6 -0
  250. scitex/db/_sqlite3/README.md +191 -0
  251. scitex/db/_sqlite3/README_v01.md +126 -0
  252. scitex/db/_sqlite3/_SQLite3.py +210 -0
  253. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +581 -0
  254. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +517 -0
  255. scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +243 -0
  256. scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +281 -0
  257. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +548 -0
  258. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +583 -0
  259. scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +124 -0
  260. scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +583 -0
  261. scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +80 -0
  262. scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +32 -0
  263. scitex/db/_sqlite3/_SQLite3Mixins/_MaintenanceMixin.py +177 -0
  264. scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +110 -0
  265. scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +115 -0
  266. scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +229 -0
  267. scitex/db/_sqlite3/_SQLite3Mixins/_TransactionMixin.py +71 -0
  268. scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +42 -0
  269. scitex/db/_sqlite3/__init__.py +7 -0
  270. scitex/db/_sqlite3/_delete_duplicates.py +274 -0
  271. scitex/db/legacy/_inspect_v02.py +171 -0
  272. scitex/db/legacy/_inspect_v03-not-optimized.py +179 -0
  273. scitex/db/legacy/_inspect_v04-working-but-printing-both-scheme-and-first-row.py +337 -0
  274. scitex/db/legacy/_inspect_v05-working-but-no-clear-separation-between-dtype-and-actual-values.py +358 -0
  275. scitex/decorators/BLUEPRINT.md +101 -0
  276. scitex/decorators/README.md +179 -0
  277. scitex/decorators/__init__.py +56 -0
  278. scitex/decorators/_auto_order.py +172 -0
  279. scitex/decorators/_batch_fn.py +128 -0
  280. scitex/decorators/_cache_disk.py +40 -0
  281. scitex/decorators/_cache_disk_async.py +49 -0
  282. scitex/decorators/_cache_mem.py +12 -0
  283. scitex/decorators/_combined.py +98 -0
  284. scitex/decorators/_converters.py +290 -0
  285. scitex/decorators/_deprecated.py +191 -0
  286. scitex/decorators/_not_implemented.py +30 -0
  287. scitex/decorators/_numpy_fn.py +87 -0
  288. scitex/decorators/_pandas_fn.py +126 -0
  289. scitex/decorators/_preserve_doc.py +19 -0
  290. scitex/decorators/_signal_fn.py +97 -0
  291. scitex/decorators/_timeout.py +55 -0
  292. scitex/decorators/_torch_fn.py +138 -0
  293. scitex/decorators/_wrap.py +39 -0
  294. scitex/decorators/_xarray_fn.py +94 -0
  295. scitex/dev/__init__.py +15 -0
  296. scitex/dev/_analyze_code_flow.py +284 -0
  297. scitex/dev/_reload.py +59 -0
  298. scitex/dict/_DotDict.py +500 -0
  299. scitex/dict/_DotDict_v01-not-handling-recursive-instantiations.py +442 -0
  300. scitex/dict/_DotDict_v02-not-serializing-Path-object.py +446 -0
  301. scitex/dict/__init__.py +20 -0
  302. scitex/dict/_flatten.py +27 -0
  303. scitex/dict/_listed_dict.py +42 -0
  304. scitex/dict/_pop_keys.py +36 -0
  305. scitex/dict/_replace.py +13 -0
  306. scitex/dict/_safe_merge.py +62 -0
  307. scitex/dict/_to_str.py +32 -0
  308. scitex/dsp/README.md +147 -0
  309. scitex/dsp/__init__.py +72 -0
  310. scitex/dsp/_crop.py +122 -0
  311. scitex/dsp/_demo_sig.py +331 -0
  312. scitex/dsp/_detect_ripples.py +212 -0
  313. scitex/dsp/_ensure_3d.py +18 -0
  314. scitex/dsp/_hilbert.py +78 -0
  315. scitex/dsp/_listen.py +702 -0
  316. scitex/dsp/_misc.py +30 -0
  317. scitex/dsp/_mne.py +32 -0
  318. scitex/dsp/_modulation_index.py +79 -0
  319. scitex/dsp/_pac.py +319 -0
  320. scitex/dsp/_psd.py +102 -0
  321. scitex/dsp/_resample.py +66 -0
  322. scitex/dsp/_time.py +37 -0
  323. scitex/dsp/_transform.py +68 -0
  324. scitex/dsp/_wavelet.py +213 -0
  325. scitex/dsp/add_noise.py +111 -0
  326. scitex/dsp/audio.md +22 -0
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