sapiopycommons 2025.4.17a489__py3-none-any.whl → 2025.4.23a491__py3-none-any.whl

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Files changed (51) hide show
  1. sapiopycommons/ai/__init__.py +0 -0
  2. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.py +123 -0
  3. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.pyi +598 -0
  4. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2_grpc.py +24 -0
  5. sapiopycommons/ai/api/plan/proto/step_output_pb2.py +45 -0
  6. sapiopycommons/ai/api/plan/proto/step_output_pb2.pyi +42 -0
  7. sapiopycommons/ai/api/plan/proto/step_output_pb2_grpc.py +24 -0
  8. sapiopycommons/ai/api/plan/proto/step_pb2.py +43 -0
  9. sapiopycommons/ai/api/plan/proto/step_pb2.pyi +43 -0
  10. sapiopycommons/ai/api/plan/proto/step_pb2_grpc.py +24 -0
  11. sapiopycommons/ai/api/plan/script/proto/script_pb2.py +53 -0
  12. sapiopycommons/ai/api/plan/script/proto/script_pb2.pyi +99 -0
  13. sapiopycommons/ai/api/plan/script/proto/script_pb2_grpc.py +153 -0
  14. sapiopycommons/ai/api/plan/tool/proto/entry_pb2.py +57 -0
  15. sapiopycommons/ai/api/plan/tool/proto/entry_pb2.pyi +96 -0
  16. sapiopycommons/ai/api/plan/tool/proto/entry_pb2_grpc.py +24 -0
  17. sapiopycommons/ai/api/plan/tool/proto/tool_pb2.py +73 -0
  18. sapiopycommons/ai/api/plan/tool/proto/tool_pb2.pyi +242 -0
  19. sapiopycommons/ai/api/plan/tool/proto/tool_pb2_grpc.py +154 -0
  20. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.py +39 -0
  21. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.pyi +32 -0
  22. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2_grpc.py +24 -0
  23. sapiopycommons/ai/tool_of_tools.py +917 -0
  24. sapiopycommons/ai/tool_service_base.py +271 -0
  25. sapiopycommons/callbacks/callback_util.py +64 -116
  26. sapiopycommons/callbacks/field_builder.py +0 -2
  27. sapiopycommons/customreport/auto_pagers.py +1 -2
  28. sapiopycommons/customreport/term_builder.py +1 -1
  29. sapiopycommons/datatype/pseudo_data_types.py +326 -349
  30. sapiopycommons/eln/experiment_handler.py +719 -336
  31. sapiopycommons/eln/plate_designer.py +2 -7
  32. sapiopycommons/files/file_util.py +4 -4
  33. sapiopycommons/general/accession_service.py +2 -2
  34. sapiopycommons/general/aliases.py +1 -4
  35. sapiopycommons/general/html_formatter.py +456 -0
  36. sapiopycommons/general/sapio_links.py +12 -4
  37. sapiopycommons/processtracking/custom_workflow_handler.py +1 -2
  38. sapiopycommons/recordmodel/record_handler.py +27 -357
  39. sapiopycommons/rules/eln_rule_handler.py +1 -8
  40. sapiopycommons/rules/on_save_rule_handler.py +1 -8
  41. sapiopycommons/webhook/webhook_handlers.py +0 -3
  42. sapiopycommons/webhook/webservice_handlers.py +2 -2
  43. {sapiopycommons-2025.4.17a489.dist-info → sapiopycommons-2025.4.23a491.dist-info}/METADATA +2 -2
  44. sapiopycommons-2025.4.23a491.dist-info/RECORD +88 -0
  45. sapiopycommons/eln/experiment_cache.py +0 -188
  46. sapiopycommons/eln/experiment_step_factory.py +0 -476
  47. sapiopycommons/eln/step_creation.py +0 -236
  48. sapiopycommons/general/data_structure_util.py +0 -115
  49. sapiopycommons-2025.4.17a489.dist-info/RECORD +0 -67
  50. {sapiopycommons-2025.4.17a489.dist-info → sapiopycommons-2025.4.23a491.dist-info}/WHEEL +0 -0
  51. {sapiopycommons-2025.4.17a489.dist-info → sapiopycommons-2025.4.23a491.dist-info}/licenses/LICENSE +0 -0
File without changes
@@ -0,0 +1,123 @@
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+ # -*- coding: utf-8 -*-
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+ # Generated by the protocol buffer compiler. DO NOT EDIT!
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+ # NO CHECKED-IN PROTOBUF GENCODE
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+ # source: sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def.proto
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+ # Protobuf Python Version: 5.29.0
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+ """Generated protocol buffer code."""
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+ from google.protobuf import descriptor as _descriptor
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+ from google.protobuf import descriptor_pool as _descriptor_pool
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+ from google.protobuf import runtime_version as _runtime_version
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+ from google.protobuf import symbol_database as _symbol_database
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+ from google.protobuf.internal import builder as _builder
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+ _runtime_version.ValidateProtobufRuntimeVersion(
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+ _runtime_version.Domain.PUBLIC,
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+ 5,
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+ 29,
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+ 0,
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+ '',
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+ 'sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def.proto'
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+ )
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+ # @@protoc_insertion_point(imports)
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+
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+ _sym_db = _symbol_database.Default()
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+
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+
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+
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+
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+ DESCRIPTOR = _descriptor_pool.Default().AddSerializedFile(b'\n:sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def.proto\"F\n\x13\x46ieldValidatorProto\x12\x18\n\x10validation_regex\x18\x01 \x01(\t\x12\x15\n\rerror_message\x18\x02 \x01(\t\"F\n\x0f\x43olorRangeProto\x12\x12\n\nfrom_value\x18\x01 \x01(\x01\x12\x10\n\x08to_value\x18\x02 \x01(\x01\x12\r\n\x05\x63olor\x18\x03 \x01(\t\"H\n\x1a\x42ooleanDependentFieldEntry\x12\x0b\n\x03key\x18\x01 \x01(\x08\x12\x1d\n\x15\x64\x65pendent_field_names\x18\x02 \x03(\t\"J\n\x1cSelectionDependentFieldEntry\x12\x0b\n\x03key\x18\x01 \x01(\t\x12\x1d\n\x15\x64\x65pendent_field_names\x18\x02 \x03(\t\"E\n\x17\x45numDependentFieldEntry\x12\x0b\n\x03key\x18\x01 \x01(\x05\x12\x1d\n\x15\x64\x65pendent_field_names\x18\x02 \x03(\t\")\n\x12ProcessDetailEntry\x12\x13\n\x0btodo_fields\x18\x01 \x03(\t\"\xb7\x01\n\x11\x42ooleanProperties\x12\x1a\n\rdefault_value\x18\x01 \x01(\x08H\x00\x88\x01\x01\x12\x1c\n\x14is_process_todo_item\x18\x02 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\x01(\x0b\x32\x12.BooleanPropertiesH\x00\x12*\n\x0f\x64\x61te_properties\x18\x65 \x01(\x0b\x32\x0f.DatePropertiesH\x00\x12.\n\x11\x64ouble_properties\x18\x66 \x01(\x0b\x32\x11.DoublePropertiesH\x00\x12\x30\n\x12integer_properties\x18g \x01(\x0b\x32\x12.IntegerPropertiesH\x00\x12*\n\x0flong_properties\x18h \x01(\x0b\x32\x0f.LongPropertiesH\x00\x12\x34\n\x14selection_properties\x18i \x01(\x0b\x32\x14.SelectionPropertiesH\x00\x12.\n\x11string_properties\x18j \x01(\x0b\x32\x11.StringPropertiesH\x00\x12\x33\n\x14side_link_properties\x18k \x01(\x0b\x32\x13.SideLinkPropertiesH\x00\x12,\n\x10short_properties\x18l \x01(\x0b\x32\x10.ShortPropertiesH\x00\x12\x32\n\x13picklist_properties\x18m \x01(\x0b\x32\x13.PickListPropertiesH\x00\x12\x37\n\x16parent_link_properties\x18n \x01(\x0b\x32\x15.ParentLinkPropertiesH\x00\x12\x39\n\x17multi_parent_properties\x18o \x01(\x0b\x32\x16.MultiParentPropertiesH\x00\x12\x36\n\x15identifier_properties\x18p 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28
+
29
+ _globals = globals()
30
+ _builder.BuildMessageAndEnumDescriptors(DESCRIPTOR, _globals)
31
+ _builder.BuildTopDescriptorsAndMessages(DESCRIPTOR, 'sapiopycommons.ai.api.fielddefinitions.proto.velox_field_def_pb2', _globals)
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+ if not _descriptor._USE_C_DESCRIPTORS:
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+ _globals['DESCRIPTOR']._loaded_options = None
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+ _globals['DESCRIPTOR']._serialized_options = b'\n$sapiopycommons.ai.api.fielddefinitions.protoP\001'
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+ _globals['_SELECTIONPROPERTIES_COLORMAPPINGENTRY']._loaded_options = None
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+ _globals['_SELECTIONPROPERTIES_COLORMAPPINGENTRY']._serialized_options = b'8\001'
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+ _globals['_SELECTIONPROPERTIES_PROCESSDETAILMAPENTRY']._loaded_options = None
38
+ _globals['_SELECTIONPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_options = b'8\001'
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+ _globals['_PICKLISTPROPERTIES_COLORMAPPINGENTRY']._loaded_options = None
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+ _globals['_PICKLISTPROPERTIES_COLORMAPPINGENTRY']._serialized_options = b'8\001'
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+ _globals['_PICKLISTPROPERTIES_PROCESSDETAILMAPENTRY']._loaded_options = None
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+ _globals['_PICKLISTPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_options = b'8\001'
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+ _globals['_ENUMPROPERTIES_COLORMAPPINGENTRY']._loaded_options = None
44
+ _globals['_ENUMPROPERTIES_COLORMAPPINGENTRY']._serialized_options = b'8\001'
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+ _globals['_FIELDTYPEPROTO']._serialized_start=7174
46
+ _globals['_FIELDTYPEPROTO']._serialized_end=7513
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+ _globals['_SORTDIRECTIONPROTO']._serialized_start=7516
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+ _globals['_SORTDIRECTIONPROTO']._serialized_end=7654
49
+ _globals['_FONTSIZEPROTO']._serialized_start=7656
50
+ _globals['_FONTSIZEPROTO']._serialized_end=7762
51
+ _globals['_TEXTDECORATIONPROTO']._serialized_start=7765
52
+ _globals['_TEXTDECORATIONPROTO']._serialized_end=7911
53
+ _globals['_STRINGFORMATPROTO']._serialized_start=7913
54
+ _globals['_STRINGFORMATPROTO']._serialized_end=8013
55
+ _globals['_DOUBLEFORMATPROTO']._serialized_start=8015
56
+ _globals['_DOUBLEFORMATPROTO']._serialized_end=8123
57
+ _globals['_FIELDVALIDATORPROTO']._serialized_start=62
58
+ _globals['_FIELDVALIDATORPROTO']._serialized_end=132
59
+ _globals['_COLORRANGEPROTO']._serialized_start=134
60
+ _globals['_COLORRANGEPROTO']._serialized_end=204
61
+ _globals['_BOOLEANDEPENDENTFIELDENTRY']._serialized_start=206
62
+ _globals['_BOOLEANDEPENDENTFIELDENTRY']._serialized_end=278
63
+ _globals['_SELECTIONDEPENDENTFIELDENTRY']._serialized_start=280
64
+ _globals['_SELECTIONDEPENDENTFIELDENTRY']._serialized_end=354
65
+ _globals['_ENUMDEPENDENTFIELDENTRY']._serialized_start=356
66
+ _globals['_ENUMDEPENDENTFIELDENTRY']._serialized_end=425
67
+ _globals['_PROCESSDETAILENTRY']._serialized_start=427
68
+ _globals['_PROCESSDETAILENTRY']._serialized_end=468
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+ _globals['_BOOLEANPROPERTIES']._serialized_start=471
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+ _globals['_BOOLEANPROPERTIES']._serialized_end=654
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+ _globals['_DATEPROPERTIES']._serialized_start=656
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+ _globals['_DATEPROPERTIES']._serialized_end=768
73
+ _globals['_DOUBLEPROPERTIES']._serialized_start=771
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+ _globals['_DOUBLEPROPERTIES']._serialized_end=1093
75
+ _globals['_INTEGERPROPERTIES']._serialized_start=1096
76
+ _globals['_INTEGERPROPERTIES']._serialized_end=1457
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+ _globals['_LONGPROPERTIES']._serialized_start=1460
78
+ _globals['_LONGPROPERTIES']._serialized_end=1818
79
+ _globals['_SHORTPROPERTIES']._serialized_start=1821
80
+ _globals['_SHORTPROPERTIES']._serialized_end=2180
81
+ _globals['_SELECTIONPROPERTIES']._serialized_start=2183
82
+ _globals['_SELECTIONPROPERTIES']._serialized_end=2905
83
+ _globals['_SELECTIONPROPERTIES_COLORMAPPINGENTRY']._serialized_start=2756
84
+ _globals['_SELECTIONPROPERTIES_COLORMAPPINGENTRY']._serialized_end=2807
85
+ _globals['_SELECTIONPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_start=2809
86
+ _globals['_SELECTIONPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_end=2885
87
+ _globals['_STRINGPROPERTIES']._serialized_start=2908
88
+ _globals['_STRINGPROPERTIES']._serialized_end=3260
89
+ _globals['_SIDELINKPROPERTIES']._serialized_start=3263
90
+ _globals['_SIDELINKPROPERTIES']._serialized_end=3469
91
+ _globals['_PICKLISTPROPERTIES']._serialized_start=3472
92
+ _globals['_PICKLISTPROPERTIES']._serialized_end=4083
93
+ _globals['_PICKLISTPROPERTIES_COLORMAPPINGENTRY']._serialized_start=2756
94
+ _globals['_PICKLISTPROPERTIES_COLORMAPPINGENTRY']._serialized_end=2807
95
+ _globals['_PICKLISTPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_start=2809
96
+ _globals['_PICKLISTPROPERTIES_PROCESSDETAILMAPENTRY']._serialized_end=2885
97
+ _globals['_PARENTLINKPROPERTIES']._serialized_start=4085
98
+ _globals['_PARENTLINKPROPERTIES']._serialized_end=4130
99
+ _globals['_MULTIPARENTPROPERTIES']._serialized_start=4132
100
+ _globals['_MULTIPARENTPROPERTIES']._serialized_end=4155
101
+ _globals['_IDENTIFIERPROPERTIES']._serialized_start=4157
102
+ _globals['_IDENTIFIERPROPERTIES']._serialized_end=4202
103
+ _globals['_FILEBLOBPROPERTIES']._serialized_start=4204
104
+ _globals['_FILEBLOBPROPERTIES']._serialized_end=4224
105
+ _globals['_ENUMPROPERTIES']._serialized_start=4227
106
+ _globals['_ENUMPROPERTIES']._serialized_end=4532
107
+ _globals['_ENUMPROPERTIES_COLORMAPPINGENTRY']._serialized_start=2756
108
+ _globals['_ENUMPROPERTIES_COLORMAPPINGENTRY']._serialized_end=2807
109
+ _globals['_DATERANGEPROPERTIES']._serialized_start=4534
110
+ _globals['_DATERANGEPROPERTIES']._serialized_end=4649
111
+ _globals['_CHILDLINKPROPERTIES']._serialized_start=4651
112
+ _globals['_CHILDLINKPROPERTIES']._serialized_end=4718
113
+ _globals['_ACTIONSTRINGPROPERTIES']._serialized_start=4721
114
+ _globals['_ACTIONSTRINGPROPERTIES']._serialized_end=4950
115
+ _globals['_ACTIONPROPERTIES']._serialized_start=4953
116
+ _globals['_ACTIONPROPERTIES']._serialized_end=5084
117
+ _globals['_ACCESSIONPROPERTIES']._serialized_start=5087
118
+ _globals['_ACCESSIONPROPERTIES']._serialized_end=5324
119
+ _globals['_VELOXFIELDDEFPROTO']._serialized_start=5327
120
+ _globals['_VELOXFIELDDEFPROTO']._serialized_end=7097
121
+ _globals['_VELOXFIELDDEFPROTOLIST']._serialized_start=7099
122
+ _globals['_VELOXFIELDDEFPROTOLIST']._serialized_end=7171
123
+ # @@protoc_insertion_point(module_scope)