roms-tools 2.6.1__py3-none-any.whl → 2.7.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (646) hide show
  1. roms_tools/__init__.py +1 -0
  2. roms_tools/analysis/roms_output.py +11 -77
  3. roms_tools/analysis/utils.py +0 -66
  4. roms_tools/constants.py +2 -0
  5. roms_tools/download.py +47 -3
  6. roms_tools/plot.py +22 -5
  7. roms_tools/setup/boundary_forcing.py +92 -70
  8. roms_tools/setup/cdr_forcing.py +1126 -0
  9. roms_tools/setup/datasets.py +952 -337
  10. roms_tools/setup/grid.py +42 -4
  11. roms_tools/setup/initial_conditions.py +70 -34
  12. roms_tools/setup/river_forcing.py +31 -98
  13. roms_tools/setup/surface_forcing.py +19 -3
  14. roms_tools/setup/tides.py +81 -411
  15. roms_tools/setup/utils.py +460 -75
  16. roms_tools/tests/test_setup/test_boundary_forcing.py +119 -36
  17. roms_tools/tests/test_setup/test_cdr_forcing.py +772 -0
  18. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zattrs +14 -0
  19. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zgroup +3 -0
  20. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zmetadata +4456 -0
  21. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/.zarray +24 -0
  22. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/.zattrs +10 -0
  23. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/0.0.0 +0 -0
  24. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/.zarray +24 -0
  25. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/.zattrs +10 -0
  26. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/0.0.0 +0 -0
  27. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/.zarray +24 -0
  28. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/.zattrs +10 -0
  29. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/0.0.0 +0 -0
  30. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/.zarray +24 -0
  31. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/.zattrs +10 -0
  32. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/0.0.0 +0 -0
  33. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/.zarray +24 -0
  34. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/.zattrs +10 -0
  35. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/0.0.0 +0 -0
  36. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/.zarray +24 -0
  37. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/.zattrs +10 -0
  38. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/0.0.0 +0 -0
  39. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/.zarray +24 -0
  40. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/.zattrs +10 -0
  41. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/0.0.0 +0 -0
  42. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/.zarray +24 -0
  43. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/.zattrs +10 -0
  44. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/0.0.0 +0 -0
  45. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/.zarray +24 -0
  46. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/.zattrs +10 -0
  47. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/0.0.0 +0 -0
  48. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/.zarray +24 -0
  49. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/.zattrs +10 -0
  50. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/0.0.0 +0 -0
  51. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/.zarray +24 -0
  52. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/.zattrs +10 -0
  53. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/0.0.0 +0 -0
  54. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/.zarray +24 -0
  55. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/.zattrs +10 -0
  56. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/0.0.0 +0 -0
  57. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/.zarray +24 -0
  58. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/.zattrs +10 -0
  59. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/0.0.0 +0 -0
  60. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/.zarray +24 -0
  61. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/.zattrs +10 -0
  62. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/0.0.0 +0 -0
  63. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/.zarray +24 -0
  64. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/.zattrs +10 -0
  65. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/0.0.0 +0 -0
  66. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/.zarray +24 -0
  67. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/.zattrs +10 -0
  68. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/0.0.0 +0 -0
  69. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/.zarray +24 -0
  70. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/.zattrs +10 -0
  71. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/0.0.0 +0 -0
  72. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/.zarray +24 -0
  73. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/.zattrs +10 -0
  74. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/0.0.0 +0 -0
  75. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/.zarray +24 -0
  76. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/.zattrs +10 -0
  77. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/0.0.0 +0 -0
  78. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/.zarray +24 -0
  79. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/.zattrs +10 -0
  80. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/0.0.0 +0 -0
  81. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/.zarray +24 -0
  82. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/.zattrs +10 -0
  83. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/0.0.0 +0 -0
  84. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/.zarray +24 -0
  85. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/.zattrs +10 -0
  86. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/0.0.0 +0 -0
  87. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/.zarray +24 -0
  88. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/.zattrs +10 -0
  89. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/0.0.0 +0 -0
  90. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/.zarray +24 -0
  91. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/.zattrs +10 -0
  92. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/0.0.0 +0 -0
  93. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_east/.zarray +24 -0
  94. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_east/.zattrs +10 -0
  95. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_east/0.0.0 +0 -0
  96. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_north/.zarray +24 -0
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  99. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_south/.zarray +24 -0
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  105. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DONr_east/.zarray +24 -0
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  111. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DONr_south/.zarray +24 -0
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  635. roms_tools/tests/test_setup/test_tides.py +112 -47
  636. roms_tools/tests/test_setup/test_validation.py +6 -0
  637. roms_tools/utils.py +115 -1
  638. {roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/METADATA +1 -3
  639. {roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/RECORD +644 -47
  640. {roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/WHEEL +1 -1
  641. roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_flux/0.0 +0 -0
  642. roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_flux/0.0 +0 -0
  643. /roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/{river_flux → river_fraction}/.zarray +0 -0
  644. /roms_tools/tests/test_setup/test_data/{river_forcing_with_bgc.zarr/river_flux → river_forcing_no_climatology.zarr/river_index}/.zarray +0 -0
  645. {roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/licenses/LICENSE +0 -0
  646. {roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/top_level.txt +0 -0
{roms_tools-2.6.1.dist-info → roms_tools-2.7.0.dist-info}/RECORD RENAMED
@@ -1,43 +1,46 @@
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_fraction/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_fraction/.zattrs,sha256=CA-yjrAQXABB7k-co60a6J2BoQfQpzPYNWhMQlLoxzo,135
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_fraction/0.0,sha256=PZyjb4Lpfz_I4EQg3OvAFNDfdUh9altcQopMHtXF0MQ,190
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_index/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_index/.zattrs,sha256=RHQeew7YvVa5QylX1Ukp3OPoRq8H03nwMRJG_PrvNEI,122
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_index/0.0,sha256=tGBbm6_EcNkKcxDQ5j6x-j1bvghA6HW773MjKk0qlqo,196
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@@ -966,17 +1545,23 @@ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_ti
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+ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_tracer/.zattrs,sha256=o8-S5Hh1BlOWs3LZ2H3l5noUxb03Eeg7Tj1Fr64ESas,216
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/.zmetadata,sha256=a7KFM7x96_6qZS5BsxKEHmL1B1TaunNEde6RBlplc4k,9002
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@@ -986,9 +1571,12 @@ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/month/0,sha256
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_flux/.zattrs,sha256=Ulaw9zPnPcNer1cdhavwQtQ_tUPPTDzTrQGcHP8u9y4,149
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_flux/0.0,sha256=_gdp3GhMsDlFGIuL7bmmlXcm1aD6AFF1fAmIjanpwWI,196
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/.zattrs,sha256=CA-yjrAQXABB7k-co60a6J2BoQfQpzPYNWhMQlLoxzo,135
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/0.0,sha256=PZyjb4Lpfz_I4EQg3OvAFNDfdUh9altcQopMHtXF0MQ,190
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/.zattrs,sha256=RHQeew7YvVa5QylX1Ukp3OPoRq8H03nwMRJG_PrvNEI,122
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/0.0,sha256=tGBbm6_EcNkKcxDQ5j6x-j1bvghA6HW773MjKk0qlqo,196
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@@ -996,14 +1584,20 @@ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_time/.za
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_tracer/.zattrs,sha256=lkp5oiE6WCviah9N4Kp8LyAUAz7MOhR0nf5Te9JJVnI,222
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/tracer_long_name/0,sha256=W4TV8gJnpQ2ZFuB8JV5-V3qDN5H4IgLKgr354bvYMXA,1228
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/tracer_unit/.zarray,sha256=4eWMRuJP39qkwdzO0xfA84REMZx4ux-_l_Oee0rRwh4,315
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/tracer_unit/.zattrs,sha256=p1CV8O4FD0nhNlKnchhUi0yoxs5C_LO720EgweJgrCQ,87
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/tracer_unit/0,sha256=KXGjlWnIWA92xF09hBEdCnD5o_4qwob6lXTFSjHzJJw,273
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@@ -1034,40 +1628,43 @@ roms_tools/tests/test_setup/test_data/surface_forcing.zarr/uwnd/0.0.0,sha256=y33
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- roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/.zattrs,sha256=eSGuZai4MuFT-0ls6scZUA96zIpRd19knT1qKeOKt6E,203
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/.zattrs,sha256=3zHGJR56QEasw14063X0UjlJfLlsRKpGUhRDugmui_o,172
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- roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/.zmetadata,sha256=JxuMF2-tbq6SZ9EWJJgmA-GGMO7A0-ths7jHO8ONZ-4,7940
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/.zmetadata,sha256=FG-laVHMIfMbVQzE7AJMc2syIgmePQ9GmnC-Yh0rda8,8432
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/ntides/.zarray,sha256=OQvNsBJhIgBR29AWJSK6SOXYxy5BDfvmsTDw3tZIyuo,312
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/ntides/.zattrs,sha256=eyhQWXmWgdG4zEDZw7JnQIB9GyOtaF9OTA2xDRSFHsM,53
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/ntides/0,sha256=Il_bgbmovgqFzrER-C7GA32gqH4eTg8BIulbfbEP6kY,28
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+ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/omega/.zattrs,sha256=eyhQWXmWgdG4zEDZw7JnQIB9GyOtaF9OTA2xDRSFHsM,53
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  roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/pot_Im/.zattrs,sha256=SgAdqj6LpCQxx7Nno_jzVs21Mqteqx1QDj3u0ZuISMw,186
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1663
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1073
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1670
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