rasa-pro 3.9.18__py3-none-any.whl

rasa/utils/tensorflow/crf.py

@@ -0,0 +1,492 @@
+import tensorflow as tf
+from tensorflow import TensorShape
+from tensorflow.types.experimental import TensorLike
+from typing import Tuple, Any, List, Union, Optional
+
+
+# original code taken from
+# https://github.com/tensorflow/addons/blob/b8cab7fd61af4f697a1cdae4f51c37c346b9c6f0/tensorflow_addons/text/crf.py
+# (modified to our neeeds)
+
+
+class CrfDecodeForwardRnnCell(tf.keras.layers.AbstractRNNCell):
+    """Computes the forward decoding in a linear-chain CRF."""
+
+    def __init__(self, transition_params: TensorLike, **kwargs: Any) -> None:
+        """Initialize the CrfDecodeForwardRnnCell.
+
+        Args:
+          transition_params: A [num_tags, num_tags] matrix of binary
+            potentials. This matrix is expanded into a
+            [1, num_tags, num_tags] in preparation for the broadcast
+            summation occurring within the cell.
+        """
+        super().__init__(**kwargs)
+        self._transition_params = tf.expand_dims(transition_params, 0)
+        self._num_tags = transition_params.shape[0]
+
+    @property
+    def state_size(self) -> int:
+        return self._num_tags
+
+    @property
+    def output_size(self) -> int:
+        """Returns count of tags."""
+        return self._num_tags
+
+    def build(self, input_shape: Union[TensorShape, List[TensorShape]]) -> None:
+        """Creates the variables of the layer."""
+        super().build(input_shape)
+
+    def call(
+        self, inputs: TensorLike, state: TensorLike
+    ) -> Tuple[tf.Tensor, tf.Tensor]:
+        """Build the CrfDecodeForwardRnnCell.
+
+        Args:
+          inputs: A [batch_size, num_tags] matrix of unary potentials.
+          state: A [batch_size, num_tags] matrix containing the previous step's
+                score values.
+
+        Returns:
+          output: A [batch_size, num_tags * 2] matrix of backpointers and scores.
+          new_state: A [batch_size, num_tags] matrix of new score values.
+        """
+        state = tf.expand_dims(state[0], 2)
+        transition_scores = state + self._transition_params
+        new_state = inputs + tf.reduce_max(transition_scores, [1])
+
+        backpointers = tf.argmax(transition_scores, 1)
+        backpointers = tf.cast(backpointers, tf.float32)
+
+        # apply softmax to transition_scores to get scores in range from 0 to 1
+        scores = tf.reduce_max(tf.nn.softmax(transition_scores, axis=1), [1])
+
+        # In the RNN implementation only the first value that is returned from a cell
+        # is kept throughout the RNN, so that you will have the values from each time
+        # step in the final output. As we need the backpointers as well as the scores
+        # for each time step, we concatenate them.
+        return tf.concat([backpointers, scores], axis=1), new_state
+
+
+def crf_decode_forward(
+    inputs: TensorLike,
+    state: TensorLike,
+    transition_params: TensorLike,
+    sequence_lengths: TensorLike,
+) -> Tuple[tf.Tensor, tf.Tensor]:
+    """Computes forward decoding in a linear-chain CRF.
+
+    Args:
+      inputs: A [batch_size, num_tags] matrix of unary potentials.
+      state: A [batch_size, num_tags] matrix containing the previous step's
+            score values.
+      transition_params: A [num_tags, num_tags] matrix of binary potentials.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+
+    Returns:
+      output: A [batch_size, num_tags * 2] matrix of backpointers and scores.
+      new_state: A [batch_size, num_tags] matrix of new score values.
+    """
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+    mask = tf.sequence_mask(sequence_lengths, tf.shape(inputs)[1])
+    crf_fwd_cell = CrfDecodeForwardRnnCell(transition_params)
+    crf_fwd_layer = tf.keras.layers.RNN(
+        crf_fwd_cell, return_sequences=True, return_state=True
+    )
+    return crf_fwd_layer(inputs, state, mask=mask)
+
+
+def crf_decode_backward(
+    backpointers: TensorLike, scores: TensorLike, state: TensorLike
+) -> Tuple[tf.Tensor, tf.Tensor]:
+    """Computes backward decoding in a linear-chain CRF.
+
+    Args:
+      backpointers: A [batch_size, num_tags] matrix of backpointer of next step
+            (in time order).
+      scores: A [batch_size, num_tags] matrix of scores of next step (in time order).
+      state: A [batch_size, 1] matrix of tag index of next step.
+
+    Returns:
+      new_tags: A [batch_size, num_tags] tensor containing the new tag indices.
+      new_scores: A [batch_size, num_tags] tensor containing the new score values.
+    """
+    backpointers = tf.transpose(backpointers, [1, 0, 2])
+    scores = tf.transpose(scores, [1, 0, 2])
+
+    def _scan_fn(_state: TensorLike, _inputs: TensorLike) -> tf.Tensor:
+        _state = tf.cast(tf.squeeze(_state, axis=[1]), dtype=tf.int32)
+        idxs = tf.stack([tf.range(tf.shape(_inputs)[0]), _state], axis=1)
+        return tf.expand_dims(tf.gather_nd(_inputs, idxs), axis=-1)
+
+    output_tags = tf.scan(_scan_fn, backpointers, state)
+    # the dtype of the input parameters of tf.scan need to match
+    # convert state to float32 to match the type of scores
+    state = tf.cast(state, dtype=tf.float32)
+    output_scores = tf.scan(_scan_fn, scores, state)
+
+    return tf.transpose(output_tags, [1, 0, 2]), tf.transpose(output_scores, [1, 0, 2])
+
+
+def crf_decode(
+    potentials: TensorLike, transition_params: TensorLike, sequence_length: TensorLike
+) -> Tuple[tf.Tensor, tf.Tensor, tf.Tensor]:
+    """Decode the highest scoring sequence of tags.
+
+    Args:
+      potentials: A [batch_size, max_seq_len, num_tags] tensor of
+                unary potentials.
+      transition_params: A [num_tags, num_tags] matrix of
+                binary potentials.
+      sequence_length: A [batch_size] vector of true sequence lengths.
+
+    Returns:
+      decode_tags: A [batch_size, max_seq_len] matrix, with dtype `tf.int32`.
+                  Contains the highest scoring tag indices.
+      decode_scores: A [batch_size, max_seq_len] matrix, containing the score of
+                    `decode_tags`.
+      best_score: A [batch_size] vector, containing the best score of `decode_tags`.
+    """
+    sequence_length = tf.cast(sequence_length, dtype=tf.int32)
+
+    # If max_seq_len is 1, we skip the algorithm and simply return the
+    # argmax tag and the max activation.
+    def _single_seq_fn() -> Tuple[tf.Tensor, tf.Tensor, tf.Tensor]:
+        decode_tags = tf.cast(tf.argmax(potentials, axis=2), dtype=tf.int32)
+        decode_scores = tf.reduce_max(tf.nn.softmax(potentials, axis=2), axis=2)
+        best_score = tf.reshape(tf.reduce_max(potentials, axis=2), shape=[-1])
+        return decode_tags, decode_scores, best_score
+
+    def _multi_seq_fn() -> Tuple[tf.Tensor, tf.Tensor, tf.Tensor]:
+        # Computes forward decoding. Get last score and backpointers.
+        initial_state = tf.slice(potentials, [0, 0, 0], [-1, 1, -1])
+        initial_state = tf.squeeze(initial_state, axis=[1])
+        inputs = tf.slice(potentials, [0, 1, 0], [-1, -1, -1])
+
+        sequence_length_less_one = tf.maximum(
+            tf.constant(0, dtype=tf.int32), sequence_length - 1
+        )
+
+        output, last_score = crf_decode_forward(
+            inputs, initial_state, transition_params, sequence_length_less_one
+        )
+
+        # output is a matrix of size [batch-size, max-seq-length, num-tags * 2]
+        # split the matrix on axis 2 to get the backpointers and scores, which are
+        # both of size [batch-size, max-seq-length, num-tags]
+        backpointers, scores = tf.split(output, 2, axis=2)
+
+        backpointers = tf.cast(backpointers, dtype=tf.int32)
+        backpointers = tf.reverse_sequence(
+            backpointers, sequence_length_less_one, seq_axis=1
+        )
+
+        scores = tf.reverse_sequence(scores, sequence_length_less_one, seq_axis=1)
+
+        initial_state = tf.cast(tf.argmax(last_score, axis=1), dtype=tf.int32)
+        initial_state = tf.expand_dims(initial_state, axis=-1)
+
+        initial_score = tf.reduce_max(tf.nn.softmax(last_score, axis=1), axis=[1])
+        initial_score = tf.expand_dims(initial_score, axis=-1)
+
+        decode_tags, decode_scores = crf_decode_backward(
+            backpointers, scores, initial_state
+        )
+
+        decode_tags = tf.squeeze(decode_tags, axis=[2])
+        decode_tags = tf.concat([initial_state, decode_tags], axis=1)
+        decode_tags = tf.reverse_sequence(decode_tags, sequence_length, seq_axis=1)
+
+        decode_scores = tf.squeeze(decode_scores, axis=[2])
+        decode_scores = tf.concat([initial_score, decode_scores], axis=1)
+        decode_scores = tf.reverse_sequence(decode_scores, sequence_length, seq_axis=1)
+
+        best_score = tf.reduce_max(last_score, axis=1)
+
+        return decode_tags, decode_scores, best_score
+
+    if potentials.shape[1] is not None:
+        # shape is statically know, so we just execute
+        # the appropriate code path
+        if potentials.shape[1] == 1:
+            return _single_seq_fn()
+
+        return _multi_seq_fn()
+
+    return tf.cond(tf.equal(tf.shape(potentials)[1], 1), _single_seq_fn, _multi_seq_fn)
+
+
+def crf_unary_score(
+    tag_indices: TensorLike, sequence_lengths: TensorLike, inputs: TensorLike
+) -> tf.Tensor:
+    """Computes the unary scores of tag sequences.
+
+    Args:
+      tag_indices: A [batch_size, max_seq_len] matrix of tag indices.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+      inputs: A [batch_size, max_seq_len, num_tags] tensor of unary potentials.
+
+    Returns:
+      unary_scores: A [batch_size] vector of unary scores.
+    """
+    tag_indices = tf.cast(tag_indices, dtype=tf.int32)
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+
+    batch_size = tf.shape(inputs)[0]
+    max_seq_len = tf.shape(inputs)[1]
+    num_tags = tf.shape(inputs)[2]
+
+    flattened_inputs = tf.reshape(inputs, [-1])
+
+    offsets = tf.expand_dims(tf.range(batch_size) * max_seq_len * num_tags, 1)
+    offsets += tf.expand_dims(tf.range(max_seq_len) * num_tags, 0)
+    # Use int32 or int64 based on tag_indices' dtype.
+    if tag_indices.dtype == tf.int64:
+        offsets = tf.cast(offsets, tf.int64)
+    flattened_tag_indices = tf.reshape(offsets + tag_indices, [-1])
+
+    unary_scores = tf.reshape(
+        tf.gather(flattened_inputs, flattened_tag_indices), [batch_size, max_seq_len]
+    )
+
+    masks = tf.sequence_mask(
+        sequence_lengths, maxlen=tf.shape(tag_indices)[1], dtype=unary_scores.dtype
+    )
+
+    unary_scores = tf.reduce_sum(unary_scores * masks, 1)
+    return unary_scores
+
+
+def crf_binary_score(
+    tag_indices: TensorLike, sequence_lengths: TensorLike, transition_params: TensorLike
+) -> tf.Tensor:
+    """Computes the binary scores of tag sequences.
+
+    Args:
+      tag_indices: A [batch_size, max_seq_len] matrix of tag indices.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+      transition_params: A [num_tags, num_tags] matrix of binary potentials.
+
+    Returns:
+      binary_scores: A [batch_size] vector of binary scores.
+    """
+    tag_indices = tf.cast(tag_indices, dtype=tf.int32)
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+
+    num_tags = tf.shape(transition_params)[0]
+    num_transitions = tf.shape(tag_indices)[1] - 1
+
+    # Truncate by one on each side of the sequence to get the start and end
+    # indices of each transition.
+    start_tag_indices = tf.slice(tag_indices, [0, 0], [-1, num_transitions])
+    end_tag_indices = tf.slice(tag_indices, [0, 1], [-1, num_transitions])
+
+    # Encode the indices in a flattened representation.
+    flattened_transition_indices = start_tag_indices * num_tags + end_tag_indices
+    flattened_transition_params = tf.reshape(transition_params, [-1])
+
+    # Get the binary scores based on the flattened representation.
+    binary_scores = tf.gather(flattened_transition_params, flattened_transition_indices)
+
+    masks = tf.sequence_mask(
+        sequence_lengths, maxlen=tf.shape(tag_indices)[1], dtype=binary_scores.dtype
+    )
+    truncated_masks = tf.slice(masks, [0, 1], [-1, -1])
+    binary_scores = tf.reduce_sum(binary_scores * truncated_masks, 1)
+    return binary_scores
+
+
+def crf_sequence_score(
+    inputs: TensorLike,
+    tag_indices: TensorLike,
+    sequence_lengths: TensorLike,
+    transition_params: TensorLike,
+) -> tf.Tensor:
+    """Computes the unnormalized score for a tag sequence.
+
+    Args:
+      inputs: A [batch_size, max_seq_len, num_tags] tensor of unary potentials
+          to use as input to the CRF layer.
+      tag_indices: A [batch_size, max_seq_len] matrix of tag indices for which
+          we compute the unnormalized score.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+      transition_params: A [num_tags, num_tags] transition matrix.
+
+    Returns:
+      sequence_scores: A [batch_size] vector of unnormalized sequence scores.
+    """
+    tag_indices = tf.cast(tag_indices, dtype=tf.int32)
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+
+    # If max_seq_len is 1, we skip the score calculation and simply gather the
+    # unary potentials of the single tag.
+    def _single_seq_fn() -> TensorLike:
+        batch_size = tf.shape(inputs, out_type=tf.int32)[0]
+        batch_inds = tf.reshape(tf.range(batch_size), [-1, 1])
+        indices = tf.concat([batch_inds, tf.zeros_like(batch_inds)], axis=1)
+
+        tag_inds = tf.gather_nd(tag_indices, indices)
+        tag_inds = tf.reshape(tag_inds, [-1, 1])
+        indices = tf.concat([indices, tag_inds], axis=1)
+
+        sequence_scores = tf.gather_nd(inputs, indices)
+
+        sequence_scores = tf.where(
+            tf.less_equal(sequence_lengths, 0),
+            tf.zeros_like(sequence_scores),
+            sequence_scores,
+        )
+        return sequence_scores
+
+    def _multi_seq_fn() -> TensorLike:
+        # Compute the scores of the given tag sequence.
+        unary_scores = crf_unary_score(tag_indices, sequence_lengths, inputs)
+        binary_scores = crf_binary_score(
+            tag_indices, sequence_lengths, transition_params
+        )
+        sequence_scores = unary_scores + binary_scores
+        return sequence_scores
+
+    return tf.cond(tf.equal(tf.shape(inputs)[1], 1), _single_seq_fn, _multi_seq_fn)
+
+
+def crf_forward(
+    inputs: TensorLike,
+    state: TensorLike,
+    transition_params: TensorLike,
+    sequence_lengths: TensorLike,
+) -> tf.Tensor:
+    """Computes the alpha values in a linear-chain CRF.
+
+    See http://www.cs.columbia.edu/~mcollins/fb.pdf for reference.
+
+    Args:
+      inputs: A [batch_size, num_tags] matrix of unary potentials.
+      state: A [batch_size, num_tags] matrix containing the previous alpha
+         values.
+      transition_params: A [num_tags, num_tags] matrix of binary potentials.
+          This matrix is expanded into a [1, num_tags, num_tags] in preparation
+          for the broadcast summation occurring within the cell.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+
+    Returns:
+      new_alphas: A [batch_size, num_tags] matrix containing the
+          new alpha values.
+    """
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+
+    last_index = tf.maximum(
+        tf.constant(0, dtype=sequence_lengths.dtype), sequence_lengths - 1
+    )
+    inputs = tf.transpose(inputs, [1, 0, 2])
+    transition_params = tf.expand_dims(transition_params, 0)
+
+    def _scan_fn(_state: TensorLike, _inputs: TensorLike) -> TensorLike:
+        _state = tf.expand_dims(_state, 2)
+        transition_scores = _state + transition_params
+        new_alphas = _inputs + tf.reduce_logsumexp(transition_scores, [1])
+        return new_alphas
+
+    all_alphas = tf.transpose(tf.scan(_scan_fn, inputs, state), [1, 0, 2])
+    # add first state for sequences of length 1
+    all_alphas = tf.concat([tf.expand_dims(state, 1), all_alphas], 1)
+
+    idxs = tf.stack([tf.range(tf.shape(last_index)[0]), last_index], axis=1)
+    return tf.gather_nd(all_alphas, idxs)
+
+
+def crf_log_norm(
+    inputs: TensorLike, sequence_lengths: TensorLike, transition_params: TensorLike
+) -> tf.Tensor:
+    """Computes the normalization for a CRF.
+
+    Args:
+      inputs: A [batch_size, max_seq_len, num_tags] tensor of unary potentials
+          to use as input to the CRF layer.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+      transition_params: A [num_tags, num_tags] transition matrix.
+
+    Returns:
+      log_norm: A [batch_size] vector of normalizers for a CRF.
+    """
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+    # Split up the first and rest of the inputs in preparation for the forward
+    # algorithm.
+    first_input = tf.slice(inputs, [0, 0, 0], [-1, 1, -1])
+    first_input = tf.squeeze(first_input, [1])
+
+    # If max_seq_len is 1, we skip the algorithm and simply reduce_logsumexp
+    # over the "initial state" (the unary potentials).
+    def _single_seq_fn() -> TensorLike:
+        log_norm = tf.reduce_logsumexp(first_input, [1])
+        # Mask `log_norm` of the sequences with length <= zero.
+        log_norm = tf.where(
+            tf.less_equal(sequence_lengths, 0), tf.zeros_like(log_norm), log_norm
+        )
+        return log_norm
+
+    def _multi_seq_fn() -> TensorLike:
+        """Forward computation of alpha values."""
+        rest_of_input = tf.slice(inputs, [0, 1, 0], [-1, -1, -1])
+        # Compute the alpha values in the forward algorithm in order to get the
+        # partition function.
+
+        alphas = crf_forward(
+            rest_of_input, first_input, transition_params, sequence_lengths
+        )
+        log_norm = tf.reduce_logsumexp(alphas, [1])
+        # Mask `log_norm` of the sequences with length <= zero.
+        log_norm = tf.where(
+            tf.less_equal(sequence_lengths, 0), tf.zeros_like(log_norm), log_norm
+        )
+        return log_norm
+
+    return tf.cond(tf.equal(tf.shape(inputs)[1], 1), _single_seq_fn, _multi_seq_fn)
+
+
+def crf_log_likelihood(
+    inputs: TensorLike,
+    tag_indices: TensorLike,
+    sequence_lengths: TensorLike,
+    transition_params: Optional[TensorLike] = None,
+) -> Tuple[tf.Tensor, tf.Tensor]:
+    """Computes the log-likelihood of tag sequences in a CRF.
+
+    Args:
+      inputs: A [batch_size, max_seq_len, num_tags] tensor of unary potentials
+          to use as input to the CRF layer.
+      tag_indices: A [batch_size, max_seq_len] matrix of tag indices for which
+          we compute the log-likelihood.
+      sequence_lengths: A [batch_size] vector of true sequence lengths.
+      transition_params: A [num_tags, num_tags] transition matrix,
+          if available.
+
+    Returns:
+      log_likelihood: A [batch_size] `Tensor` containing the log-likelihood of
+        each example, given the sequence of tag indices.
+      transition_params: A [num_tags, num_tags] transition matrix. This is
+          either provided by the caller or created in this function.
+    """
+    inputs = tf.convert_to_tensor(inputs)
+
+    num_tags = inputs.shape[2]
+
+    # cast type to handle different types
+    tag_indices = tf.cast(tag_indices, dtype=tf.int32)
+    sequence_lengths = tf.cast(sequence_lengths, dtype=tf.int32)
+
+    if transition_params is None:
+        initializer = tf.keras.initializers.GlorotUniform()
+        transition_params = tf.Variable(
+            initializer([num_tags, num_tags]), "transitions"
+        )
+    transition_params = tf.cast(transition_params, inputs.dtype)
+    sequence_scores = crf_sequence_score(
+        inputs, tag_indices, sequence_lengths, transition_params
+    )
+    log_norm = crf_log_norm(inputs, sequence_lengths, transition_params)
+
+    # Normalize the scores to get the log-likelihood per example.
+    log_likelihood = sequence_scores - log_norm
+    return log_likelihood, transition_params