rapidtide 3.0a12__py3-none-any.whl → 3.0a14__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (70) hide show
  1. cloud/gmscalc-HCPYA +1 -1
  2. cloud/rapidtide-HCPYA +3 -3
  3. rapidtide/Colortables.py +10 -10
  4. rapidtide/DerivativeDelay.py +213 -0
  5. rapidtide/{Refiner.py → RegressorRefiner.py} +1 -1
  6. rapidtide/__init__.py +2 -1
  7. rapidtide/_version.py +1 -1
  8. rapidtide/data/examples/src/test_mlregressallt.py +32 -17
  9. rapidtide/data/examples/src/testalign +1 -1
  10. rapidtide/data/examples/src/testboth +1 -1
  11. rapidtide/data/examples/src/testcifti +11 -0
  12. rapidtide/data/examples/src/testdelayvar +14 -0
  13. rapidtide/data/examples/src/testfmri +1 -0
  14. rapidtide/data/examples/src/testglmfilt +8 -6
  15. rapidtide/data/examples/src/testhappy +1 -1
  16. rapidtide/data/examples/src/testnewrefine +11 -11
  17. rapidtide/data/examples/src/testnoiseamp +2 -2
  18. rapidtide/data/examples/src/testretro +16 -7
  19. rapidtide/data/examples/src/testretrolagtcs +1 -1
  20. rapidtide/dlfilter.py +0 -1
  21. rapidtide/fit.py +41 -9
  22. rapidtide/happy_supportfuncs.py +5 -0
  23. rapidtide/io.py +13 -2
  24. rapidtide/{glmpass.py → linfitfiltpass.py} +23 -19
  25. rapidtide/makelaggedtcs.py +8 -5
  26. rapidtide/multiproc.py +8 -11
  27. rapidtide/refinedelay.py +234 -109
  28. rapidtide/resample.py +3 -0
  29. rapidtide/scripts/{retroglm.py → delayvar.py} +2 -2
  30. rapidtide/scripts/{glmfilt.py → linfitfilt.py} +2 -2
  31. rapidtide/scripts/retroregress.py +28 -0
  32. rapidtide/scripts/stupidramtricks.py +9 -7
  33. rapidtide/simfuncfit.py +1 -1
  34. rapidtide/tests/cleanposttest +21 -0
  35. rapidtide/tests/test_delayestimation.py +3 -3
  36. rapidtide/tests/test_fastresampler.py +1 -2
  37. rapidtide/tests/test_fullrunhappy_v1.py +14 -6
  38. rapidtide/tests/test_fullrunhappy_v2.py +17 -9
  39. rapidtide/tests/test_fullrunhappy_v3.py +16 -8
  40. rapidtide/tests/test_fullrunhappy_v4.py +16 -8
  41. rapidtide/tests/test_fullrunhappy_v5.py +14 -6
  42. rapidtide/tests/test_fullrunrapidtide_v1.py +20 -12
  43. rapidtide/tests/test_fullrunrapidtide_v2.py +21 -13
  44. rapidtide/tests/test_fullrunrapidtide_v3.py +15 -7
  45. rapidtide/tests/test_fullrunrapidtide_v4.py +14 -7
  46. rapidtide/tests/test_fullrunrapidtide_v5.py +13 -5
  47. rapidtide/tests/test_fullrunrapidtide_v6.py +34 -26
  48. rapidtide/tests/{test_glmpass.py → test_linfitfiltpass.py} +9 -9
  49. rapidtide/tests/test_motionregress.py +3 -3
  50. rapidtide/tests/test_refinedelay.py +14 -12
  51. rapidtide/tidepoolTemplate_alt_qt6.py +172 -45
  52. rapidtide/tidepoolTemplate_big_qt6.py +196 -53
  53. rapidtide/tidepoolTemplate_qt6.py +150 -39
  54. rapidtide/workflows/atlasaverage.py +40 -12
  55. rapidtide/workflows/delayvar.py +1136 -0
  56. rapidtide/workflows/happy.py +37 -11
  57. rapidtide/workflows/happy_parser.py +4 -4
  58. rapidtide/workflows/{glmfilt.py → linfitfilt.py} +4 -4
  59. rapidtide/workflows/rapidtide.py +246 -178
  60. rapidtide/workflows/rapidtide_parser.py +116 -101
  61. rapidtide/workflows/{glmfrommaps.py → regressfrommaps.py} +30 -26
  62. rapidtide/workflows/retrolagtcs.py +13 -12
  63. rapidtide/workflows/{retroglm.py → retroregress.py} +182 -141
  64. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info}/METADATA +3 -2
  65. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info}/RECORD +69 -64
  66. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info}/WHEEL +1 -1
  67. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info}/entry_points.txt +3 -2
  68. rapidtide/data/examples/src/testoutputsize +0 -45
  69. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info/licenses}/LICENSE +0 -0
  70. {rapidtide-3.0a12.dist-info → rapidtide-3.0a14.dist-info}/top_level.txt +0 -0
@@ -1,6 +1,6 @@
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- Metadata-Version: 2.2
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+ Metadata-Version: 2.4
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  Name: rapidtide
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- Version: 3.0a12
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+ Version: 3.0a14
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  Summary: Tools for performing correlation analysis on fMRI data.
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  Author: Taylor Salo, Daniel M. Drucker, Ph.D., Jeffrey N Stout, Yaroslav O. Halchenko, Derek Monroe
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  Author-email: "Blaise deB. Frederick" <blaise.frederick@gmail.com>
@@ -58,6 +58,7 @@ Requires-Dist: myst-parser; extra == "doc"
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  Requires-Dist: numpydoc; extra == "doc"
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  Requires-Dist: sphinxcontrib-bibtex; extra == "doc"
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  Requires-Dist: tomlkit; extra == "doc"
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+ Dynamic: license-file
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  The rapidtide package
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  =====================
@@ -1,52 +1,53 @@
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  cloud/download-nda-data,sha256=HvXi0THILXhAEQBgJOAgiQ57fkrqUOJHQw7wm_0XfZ8,987
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  cloud/downloadcmd-auther,sha256=1duAStDVtLnSfZBqZfGk8CGUr_kn5NlnYwxQgUH2ekM,380
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- cloud/gmscalc-HCPYA,sha256=frR4gmsNACbvkmEv7YtyXnTwsAAFpjbwy81Pl8XYXfk,581
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+ cloud/gmscalc-HCPYA,sha256=LvsckizXGuIjmimOrLJ0_gJMrafQux9XjXzOqoRlY6g,586
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  cloud/list-rapidtide-relevant-images,sha256=s-DolKbUgoJ18blNwzX287nTaaQrenTnxzqA8rL-DlQ,5799
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  cloud/mount-and-run,sha256=x6829t-u2vH1NpjxaaES39dv393E5EIv3S0WYdgLytY,2465
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- cloud/rapidtide-HCPYA,sha256=e3GJeE2_O_x-eGqvPJ6qWp6g4T_askxrsM-PTpRdEjc,949
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+ cloud/rapidtide-HCPYA,sha256=kqW8ENbOQhvVqZGz-HqiVbrbzHy4cfyy1rk8ejpJor0,963
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  cloud/rapidtide-cloud-test,sha256=SATOwGo4QYLvt-6hE0e3wyK9JjuDU5XzfLrfMoybvcY,466
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  cloud/simple-cp-test,sha256=5ef8wmLfcKdny59BV6_DnAPj7O_mi0rOHdFZVN2iiLA,421
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- rapidtide/Colortables.py,sha256=AQC-aHwgemxZNKtf8du7Oe08IKKxuOsUF1bDEdSyleY,5804
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+ rapidtide/Colortables.py,sha256=Qok5h6-U6sVl0zhITI8D0Uxtp3zmyQv4OCiU-6sNTnM,5814
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+ rapidtide/DerivativeDelay.py,sha256=OtLUFE3wfGz9y5GuVszUtYYqPXxTzYW2UP_leNRS6ac,7253
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  rapidtide/OrthoImageItem.py,sha256=uN-fMX4vVB00-AFoUnfOXXq1qjLXruzOqYttNJYpIpM,21669
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  rapidtide/RapidtideDataset.py,sha256=BEGznVDvLzL1Cd9TtuwicCYXcVug8hX1t-6qnEjMEDg,52239
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- rapidtide/Refiner.py,sha256=9__em_DB8apzId7joLC0L_eermTUVMWDN8P9I54Gurc,17223
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- rapidtide/__init__.py,sha256=DrceP8tLrtTWV8PwS7YAgw6NuFkKAREFM7FsTaZob-s,96
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- rapidtide/_version.py,sha256=cTDBv24D1_YgVeFU_x3GvlNlQD-clOji6E0Sb34osJY,24506
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+ rapidtide/RegressorRefiner.py,sha256=Cp5hGsEO_KYiTxbtZCLBTsgi5gjKd3xoP_A3TaQtF_E,17232
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+ rapidtide/__init__.py,sha256=cECnPfGNIWXETiummGLjKcNXLROSDiFlLp-RpZSavwc,97
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+ rapidtide/_version.py,sha256=w4vUyi4REvA9LeJul_uv8AcuFACKR4WIGQRoh2xocL8,24506
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  rapidtide/calcandfitcorrpairs.py,sha256=UmCp9eSU--HCYd7frdO9ctnMeDK32D1Eb53b1hdzw9w,7397
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  rapidtide/calccoherence.py,sha256=SjSWcqbyATKu5Hya5LgRCTfq2w9l7G9L_kZbol802sk,4512
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  rapidtide/calcnullsimfunc.py,sha256=_L5Gxr1CI0GKmGmEjHzrYNufAzDchDsruYCzboSgw3s,7150
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  rapidtide/calcsimfunc.py,sha256=Jw_589HsH4ErYzI54jPezSRzBW7_xjxc71sstDbalng,5198
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  rapidtide/correlate.py,sha256=iZzJa2QV7Le1_Vr9l8Zj2QS0_ZV-EXKtWkOAcICI8ec,36266
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- rapidtide/dlfilter.py,sha256=8hmOCyGSMQqT2p_rAwOrvs2FaafqbQBEpvFkHAKlxew,55505
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+ rapidtide/dlfilter.py,sha256=4fxOd3iXj7X_fvHYZIuS4N5riadtsOfXVypg1rU5ipU,55504
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  rapidtide/externaltools.py,sha256=YhxuSn5z3v5E7PzB07yftXJGw95rs95Nmxbq4Wo2fhU,3965
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  rapidtide/fMRIData_class.py,sha256=TrR-MyIBEzbUgUq8oQVmjkddnrhxeN_rHlX-En0p4Ao,5102
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  rapidtide/filter.py,sha256=Ci62Vcw_qKX--Hzut9kb6XmBLjEe773JyGkGJtnH2g4,71773
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- rapidtide/fit.py,sha256=lAzLc19VAhq3QJFSbaCbAWCNDefxSCsJfjW5WLHABMk,67130
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- rapidtide/glmpass.py,sha256=1Wd91y9KrJm2jAccFe7DYBVZCQBab8mQ2TkjDdW1dRM,15953
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- rapidtide/happy_supportfuncs.py,sha256=3AuKqhWApvSiHUJS8YGyuuB66pEuodd6rmOp83JEKiU,47839
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+ rapidtide/fit.py,sha256=GA7v2fuQnSztsUCFdqEbAzdXRyLUXI-aQw_E31WvsOs,68081
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+ rapidtide/happy_supportfuncs.py,sha256=z9VTliXvZoQEjU6FSaPk6etYUB7KSFCQbdzMIAVx6ik,47937
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  rapidtide/helper_classes.py,sha256=jMS1SIU8YFZrZ10s3kOwbT0139CtTG3DLkJoyuDiiNQ,51401
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- rapidtide/io.py,sha256=8J57TnfsYtOHJ1fSVGyy4Wnz5tH6djS-d7-i22-M-2c,74421
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- rapidtide/makelaggedtcs.py,sha256=GsJ3svPSRJIHzJ9F5ZpT0eW3k6rIUCGXgq4o-sK4R-E,3889
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+ rapidtide/io.py,sha256=tEw1E1Gsxu-_A1spMz1wU98d9R5xZof06qiGvYr2sEQ,74789
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+ rapidtide/linfitfiltpass.py,sha256=fXUhCvT9Yd1qmwokHxpK_UBeUA55-FlDkhG10JHGl7o,16142
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+ rapidtide/makelaggedtcs.py,sha256=FFqnCuTYRBhcpFgJVffvOaiz7j5FjDtwYZ6Pip2U7AE,3998
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  rapidtide/maskutil.py,sha256=noqFZzAvyAy0ZzEa1nmEIGzWA0zaPoNSIP3ck1cFKcE,6089
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  rapidtide/miscmath.py,sha256=Wj3GXNkXbvGlsdxYGUMTZ3H5a3a1uhfTWZV73XtUYx4,14044
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- rapidtide/multiproc.py,sha256=Ri40ebUkxofKwqIKuZ0_FuQvp4uWFPE8yWMOau3TJ78,6238
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+ rapidtide/multiproc.py,sha256=dMFUZHhtRkNCKQhNdqvO1Eq285DGMdQW13UxyszfuDA,6068
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  rapidtide/patchmatch.py,sha256=ZhGuJSwd_UBBJERuABLWzE-HvHLtMgP_Ep4-jq3q1rI,20643
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  rapidtide/peakeval.py,sha256=4wboYOtGX1q9p2LmAX_eXcw1YsDWhzlGd-hMVQaso9Y,5198
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  rapidtide/qualitycheck.py,sha256=VL4vA4IRoTPZ4fJHwKrYXsJDmsEs4qUV9xvxjvKpchA,11917
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- rapidtide/refinedelay.py,sha256=Ue3KH1K3S34RaWs6KvmVNCPzyHOYruTXk13VSFdAGCI,11552
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+ rapidtide/refinedelay.py,sha256=shx6KyPawJc_hYtfm17Jmk162Zg5AfToyzYEs8FJIWc,16436
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  rapidtide/refineregressor.py,sha256=50CXj57k5gccTqfn6tugLM1UxSvr_ImPDch9YwMkL5o,22950
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- rapidtide/resample.py,sha256=wM3Ssq71EhAxNYcCmL-5-n6vMgx63S5g9nKOZBOWSLw,30473
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- rapidtide/simfuncfit.py,sha256=YEgt-NYp0rVCCcGqnu8FFIQaNLqAJ_6CMg86_ShYHKg,11833
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+ rapidtide/resample.py,sha256=RA9Rf9Z0jl1nhz4aV5LOlJCm_PVannuBdYZNe3jwECU,30592
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+ rapidtide/simfuncfit.py,sha256=ypGBraJCk5ParOc-ll9-iVDQHh9OYXqGd3SaN9AoU5Y,11837
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  rapidtide/stats.py,sha256=_UnjWwXo6LjYvaLfwrRhfdQ8wBXXuiuWnTqcld-myDA,29356
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  rapidtide/tidepoolTemplate.py,sha256=YK6vXIXfgAq5OHa67RjvL0MhMJIIgjmDpxQY16Cwnl4,46252
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  rapidtide/tidepoolTemplate_alt.ui,sha256=PMvFcSKJKfGboq-YOntzGqwIg1xLHfCnbXEW0ooI5A0,52237
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- rapidtide/tidepoolTemplate_alt_qt6.py,sha256=FivtOPUCQifXrvjYFhkJ-z05fHD2yJYbKKfIT4nr2Fc,52521
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+ rapidtide/tidepoolTemplate_alt_qt6.py,sha256=x6xqh1nC89GgFlmozjSPfrjJnjZ1S1t8dUoSp7kZ1Cs,54016
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- rapidtide/tidepoolTemplate_big_qt6.py,sha256=iD8q4FhTyMknjhRy5H_EFQliW4cWIwyL43EE1v5Kujw,65828
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- rapidtide/tidepoolTemplate_qt6.py,sha256=MGgLo3q8RnvM4uuWIIEqNz0tRil7dGweyX5jF8lNUtQ,46899
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+ rapidtide/tidepoolTemplate_big_qt6.py,sha256=yXmFpoO5exhbXHtjKVE7AG-oi7tB6QOCFW5RRO0z6Ls,67499
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+ rapidtide/tidepoolTemplate_qt6.py,sha256=qBgufkyHsmEZ_HPgAu8LLbztlwlyfm6KcRfJ9qVFbXc,48198
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@@ -54,32 +55,33 @@ rapidtide/wiener2.py,sha256=CSsNRqeSCrCJgD-FqOJ8RVoGKbdb-PW8e0cQfD3QyfY,3746
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- rapidtide/data/examples/src/test_mlregressallt.py,sha256=bxvNtYMDl2LE3G8WtTyHG_M9VlGJo-I2PPjPo8qS_Tk,1442
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+ rapidtide/data/examples/src/test_mlregressallt.py,sha256=dDSoovevThiwvVb9YyME8WCBFLgObec5nWNYJRNhVmQ,2016
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- rapidtide/data/examples/src/testalign,sha256=qgT6Tv1zAAbV3dDF79I51enqSKk3ryH8gRJ8u1ieNHQ,1562
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+ rapidtide/data/examples/src/testalign,sha256=GgLe7BORaUiDd16lRIlv7frn8xO1zBf75Md_Ii1n4Is,1565
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- rapidtide/data/examples/src/testboth,sha256=6MhJZklqubQxs96ECuynHHfaiDkdGf9Rwy7FKI6lzE8,451
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+ rapidtide/data/examples/src/testboth,sha256=ITAqA3XOC9duFRoBtZgGL9pLnh7Po43i8qjUImSq_eo,455
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+ rapidtide/data/examples/src/testcifti,sha256=Nw4UMzkh1oFdW4FuAznuOR9hAr2KJuPF86gZnqqJylU,265
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- rapidtide/data/examples/src/testfmri,sha256=b76qgfPF3MhJt3lSN60glr8jdNQ63Y-Zxb8JsDl3lww,203
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+ rapidtide/data/examples/src/testfmri,sha256=7gdvJYU2ee0rz4k2PG52JQs-17-T5HyixdLEMeqlzEI,237
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- rapidtide/data/examples/src/testglmfilt,sha256=LD2cTB-7yyCc31jAr8UtYksf-Cn-YLC3ScnV3olvpFE,3333
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- rapidtide/data/examples/src/testhappy,sha256=7dKe3PM-nPRbsroGRq3RQFFABPdNuByS3aEddgu_Oyc,1712
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+ rapidtide/data/examples/src/testglmfilt,sha256=MuZlVBJIV7FrTWFLKGuWBcpR9WiZEjCGeD6cAnJLeNI,3357
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+ rapidtide/data/examples/src/testhappy,sha256=UGv-7LUrpto2NfmwHgAa2Msa-aXmRJPJTRTfrKfrhjc,1719
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- rapidtide/data/examples/src/testnewrefine,sha256=-Y2eK4LGPvPwYCeUt6nGRuuzk468dHsbnnSZplj6L_o,1100
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- rapidtide/data/examples/src/testnoiseamp,sha256=ZRu3GstBhdnwZmDF7ExZynOXFFMElWiZuod8LbUKa-I,612
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  rapidtide/workflows/histnifti.py,sha256=DtRWkN43GPIuXRCgvCvLrIoeVAjo0AIk1qmrBRBQjJI,11197
296
299
  rapidtide/workflows/histtc.py,sha256=rlTUsiXB1rBv4noNmjKmHajonuhkqSicp98k2JxiPj0,4561
300
+ rapidtide/workflows/linfitfilt.py,sha256=KB9R1x3GMKzruS8_eZ7X2Jyu8EpdyzMDrM007LdH3Uc,10007
297
301
  rapidtide/workflows/localflow.py,sha256=TvdoUdz_1zIn79UsaPWDPCgrRzy_Yp8wHi7ASdVA1XY,23542
298
302
  rapidtide/workflows/mergequality.py,sha256=HncFLHRUGV_oNeVZLRKTG90XcQeYfl1LaMZohQJ2wk8,15609
299
303
  rapidtide/workflows/niftidecomp.py,sha256=_v4eLxPyQ5YKKjHB8vvqV47Uh3ITcQV4PRq2ks6tpqQ,15441
@@ -307,13 +311,14 @@ rapidtide/workflows/plethquality.py,sha256=ZNkMS6cGkM2UG796KwCrhiCC7mzEmFt62Nxy1
307
311
  rapidtide/workflows/polyfitim.py,sha256=18pCkdk176_hyWdCgRe-B4AEP0wjHheWdPq25SsKy6w,10184
308
312
  rapidtide/workflows/proj2flow.py,sha256=MWtf0eTyQ7MfIbWRup4s6TLuk-vKbYgWkSZC9BOBYcM,7290
309
313
  rapidtide/workflows/rankimage.py,sha256=twZsGJaVd0raffzKlI0Tupy4DJxHyhBv8WqIUNEtiNM,3482
310
- rapidtide/workflows/rapidtide.py,sha256=lQAGLyalyLHDc--7O57TGkk1ppZF0D4AdIKDw2n_uT0,171455
314
+ rapidtide/workflows/rapidtide.py,sha256=RQaqe6DYO9uG3mMwERBF0hBPkwx1grXWsUdMdWaVtwE,174440
311
315
  rapidtide/workflows/rapidtide2std.py,sha256=wGNwyAPnaI3sCG14ORWmlFQRgXmNn6uVVlPirwk1URg,10413
312
- rapidtide/workflows/rapidtide_parser.py,sha256=rmbJ-Wy9SUbb4iMeLTfZH2X2xBasPJc5ZK3SMY-MLLM,78508
316
+ rapidtide/workflows/rapidtide_parser.py,sha256=Ybsl6bQe1pQBCKT1IyBpvfXNSdLmkKIDoOGjlG8uMlA,79470
317
+ rapidtide/workflows/regressfrommaps.py,sha256=Xz5SQCbasBPzJtXBa7q0-U3Lo4zs-a1JZrfHU1kCUZ8,6298
313
318
  rapidtide/workflows/resamplenifti.py,sha256=48vf0JT0C4gjPty_R0RDMRd6opilUQ3stevzAvdKInc,4717
314
319
  rapidtide/workflows/resampletc.py,sha256=OZJOHnQAaN371pFt_qb8hY8JQ12WggHK6ZP7Q84rvOk,3959
315
- rapidtide/workflows/retroglm.py,sha256=cM3MBjUgrYcJfyaj6VoT3lBpvSaKeMKU7GzN5Pc9mY0,41453
316
- rapidtide/workflows/retrolagtcs.py,sha256=uewpP6ZpimLrmrRN_iZPjvzITUTWE-mNh1tipFWwVWA,10747
320
+ rapidtide/workflows/retrolagtcs.py,sha256=b810u7kTzmIM2OubOz_hILlB01ATYQ3s0wPbFROthHc,10847
321
+ rapidtide/workflows/retroregress.py,sha256=DFqEiGz6u7mXIgrPP2Np8KVJ-hjL-I6zLPrMKz61uv0,43382
317
322
  rapidtide/workflows/roisummarize.py,sha256=hFYkkYV7fL3gNpAu6Diu1KhOUwLm0cNjWX7V2UNhy4M,6710
318
323
  rapidtide/workflows/runqualitycheck.py,sha256=zFjyhfh_9A5U5GIFIIkITuYa8XlwiEM_1dYg7IJgF6w,2434
319
324
  rapidtide/workflows/showarbcorr.py,sha256=D6Te4fKQaKZC5GFGNlhFkq--NypJ6msApXjqIuGlGMs,13606
@@ -332,9 +337,9 @@ rapidtide/workflows/tcfrom3col.py,sha256=6tV2lGEtXpI4dn_8kcTCVzZxpJzmopuDwpXvOIE
332
337
  rapidtide/workflows/tidepool.py,sha256=1nYPa_-Z-nYZR-fZNo_8dY9LoO_vl7kwiRC_reM2044,86395
333
338
  rapidtide/workflows/utils.py,sha256=k2m2F1-tWxhcUYvk5geO1yl-c5bKcDX7Jv7ohvJZaOk,5379
334
339
  rapidtide/workflows/variabilityizer.py,sha256=yQFDTBcGehxW44R_FQHeeKrTpeYrrh96xcW1uWbPtYo,3167
335
- rapidtide-3.0a12.dist-info/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
336
- rapidtide-3.0a12.dist-info/METADATA,sha256=T2uFP-QmpBzvvF4DijO6gn0BpQB-292z6PLF3eEjtSo,15624
337
- rapidtide-3.0a12.dist-info/WHEEL,sha256=beeZ86-EfXScwlR_HKu4SllMC9wUEj_8Z_4FJ3egI2w,91
338
- rapidtide-3.0a12.dist-info/entry_points.txt,sha256=76O4RdCVLd7YrASvmgJQWaRUlgmBzMDU5_XkGIlmuTk,3260
339
- rapidtide-3.0a12.dist-info/top_level.txt,sha256=MnNXGfbrIBc9RnAqzBHOWd3GQO-aIUDnRTz4_5VjH5g,16
340
- rapidtide-3.0a12.dist-info/RECORD,,
340
+ rapidtide-3.0a14.dist-info/licenses/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
341
+ rapidtide-3.0a14.dist-info/METADATA,sha256=f3r6Gm863KmFDEr_XN684SsUZ8wboLVet1Bu9GQSGCo,15646
342
+ rapidtide-3.0a14.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
343
+ rapidtide-3.0a14.dist-info/entry_points.txt,sha256=9NVvZpIx9U6lTWlTFF2ev-wuPAHJxcXI_901_EcGRYA,3323
344
+ rapidtide-3.0a14.dist-info/top_level.txt,sha256=MnNXGfbrIBc9RnAqzBHOWd3GQO-aIUDnRTz4_5VjH5g,16
345
+ rapidtide-3.0a14.dist-info/RECORD,,
@@ -1,5 +1,5 @@
1
1
  Wheel-Version: 1.0
2
- Generator: setuptools (76.1.0)
2
+ Generator: setuptools (78.1.0)
3
3
  Root-Is-Purelib: true
4
4
  Tag: py3-none-any
5
5
 
@@ -8,6 +8,7 @@ calcicc = rapidtide.scripts.calcicc:entrypoint
8
8
  calctexticc = rapidtide.scripts.calctexticc:entrypoint
9
9
  calcttest = rapidtide.scripts.calcttest:entrypoint
10
10
  ccorrica = rapidtide.scripts.ccorrica:entrypoint
11
+ delayvar = rapidtide.scripts.delayvar:entrypoint
11
12
  diffrois = rapidtide.scripts.diffrois:entrypoint
12
13
  endtidalproc = rapidtide.scripts.endtidalproc:entrypoint
13
14
  fdica = rapidtide.scripts.fdica:entrypoint
@@ -15,13 +16,13 @@ filtnifti = rapidtide.scripts.filtnifti:entrypoint
15
16
  filttc = rapidtide.scripts.filttc:entrypoint
16
17
  fingerprint = rapidtide.scripts.fingerprint:entrypoint
17
18
  fixtr = rapidtide.scripts.fixtr:entrypoint
18
- glmfilt = rapidtide.scripts.glmfilt:entrypoint
19
19
  gmscalc = rapidtide.scripts.gmscalc:entrypoint
20
20
  happy = rapidtide.scripts.happy:entrypoint
21
21
  happy2std = rapidtide.scripts.happy2std:entrypoint
22
22
  happywarp = rapidtide.scripts.happywarp:entrypoint
23
23
  histnifti = rapidtide.scripts.histnifti:entrypoint
24
24
  histtc = rapidtide.scripts.histtc:entrypoint
25
+ linfitfilt = rapidtide.scripts.linfitfilt:entrypoint
25
26
  localflow = rapidtide.scripts.localflow:entrypoint
26
27
  mergequality = rapidtide.scripts.mergequality:entrypoint
27
28
  pairproc = rapidtide.scripts.pairproc:entrypoint
@@ -36,8 +37,8 @@ rapidtide = rapidtide.scripts.rapidtide:entrypoint
36
37
  rapidtide2std = rapidtide.scripts.rapidtide2std:entrypoint
37
38
  resamplenifti = rapidtide.scripts.resamplenifti:entrypoint
38
39
  resampletc = rapidtide.scripts.resampletc:entrypoint
39
- retroglm = rapidtide.scripts.retroglm:entrypoint
40
40
  retrolagtcs = rapidtide.scripts.retrolagtcs:entrypoint
41
+ retroregress = rapidtide.scripts.retroregress:entrypoint
41
42
  roisummarize = rapidtide.scripts.roisummarize:entrypoint
42
43
  runqualitycheck = rapidtide.scripts.runqualitycheck:entrypoint
43
44
  showarbcorr = rapidtide.scripts.showarbcorr:entrypoint
@@ -1,45 +0,0 @@
1
- #!/bin/bash
2
-
3
-
4
- for LEVEL in min less normal more max
5
- do
6
- mkdir -p ../dst/nomotregress/${LEVEL}
7
- sbatch --mem=64G --time=90 --cpus-per-task 4 /cm/shared/miniforge3/envs/mic/bin/rapidtide \
8
- --nprocs 4 \
9
- --passes 3 \
10
- --outputlevel ${LEVEL} \
11
- --searchrange -5 10 \
12
- --noglm \
13
- /data2/HCP1200/100307/preproc/100307/MNINonLinear/Results/rfMRI_REST1_LR/rfMRI_REST1_LR.nii.gz \
14
- /home/frederic/code/rapidtide/rapidtide/data/examples/dst/nomotregress/${LEVEL}/sub-RAPIDTIDETEST
15
- done
16
-
17
- for LEVEL in min less normal more max
18
- do
19
- mkdir -p ../dst/motregress/${LEVEL}
20
- sbatch --mem=64G --time=90 --cpus-per-task 4 /cm/shared/miniforge3/envs/mic/bin/rapidtide \
21
- --nprocs 4 \
22
- --passes 3 \
23
- --outputlevel ${LEVEL} \
24
- --searchrange -5 10 \
25
- --noglm \
26
- --motionfile /data2/HCP1200/100307/preproc/100307/MNINonLinear/Results/rfMRI_REST1_LR/Movement_Regressors.txt:0-5 \
27
- /data2/HCP1200/100307/preproc/100307/MNINonLinear/Results/rfMRI_REST1_LR/rfMRI_REST1_LR.nii.gz \
28
- /home/frederic/code/rapidtide/rapidtide/data/examples/dst/motregress/${LEVEL}/sub-RAPIDTIDETEST
29
- done
30
-
31
- for LEVEL in min less normal more max
32
- do
33
- for NDERIVS in 0 1
34
- do
35
- mkdir -p ../dst/nomotregress/${LEVEL}glm${NDERIVS}
36
- sbatch --mem=64G --time=90 --cpus-per-task 4 /cm/shared/miniforge3/envs/mic/bin/rapidtide \
37
- --nprocs 4 \
38
- --passes 3 \
39
- --outputlevel ${LEVEL} \
40
- --glmderivs ${NDERIVS} \
41
- --searchrange -5 10 \
42
- /data2/HCP1200/100307/preproc/100307/MNINonLinear/Results/rfMRI_REST1_LR/rfMRI_REST1_LR.nii.gz \
43
- /home/frederic/code/rapidtide/rapidtide/data/examples/dst/nomotregress/${LEVEL}glm${NDERIVS}/sub-RAPIDTIDETEST
44
- done
45
- done