radnn 0.0.7.2__py3-none-any.whl → 0.0.8__py3-none-any.whl

radnn/plots/plot_auto_multi_image.py

@@ -1,5 +1,10 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
 # Copyright (c) 2022-2025 Pantelis I. Kaplanoglou
 
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import numpy as np
 import matplotlib.pyplot as plt
 
@@ -44,9 +48,9 @@ class AutoMultiImagePlot(object):
     self.row_count = len(self.rows)
     self.row_titles.append(row_title)
 
-  def add_column(self, images, image_title=None, color_map=None, aspect=None, extent=None):
+  def add_column(self, image, image_title=None, color_map=None, aspect=None, extent=None):
     oRowColumns = self.rows[self.current_row]
-    dImage = {"image": images, "title": image_title
+    dImage = {"image": image, "title": image_title
       , "cmap": color_map, "aspect": aspect
       , "extend": extent}
 
@@ -63,7 +67,7 @@ class AutoMultiImagePlot(object):
     nColumns = restrict_columns
     if nColumns is None:
       nColumns = self.max_col_count
-    fig, oSubplotGrid = plt.subplots(nrows=self.row_count, ncols=nColumns
+    fig, oSubplotGrid = plt.subplots(  nrows=self.row_count, ncols=nColumns
                                      , figsize=figure_size
                                      , subplot_kw={'xticks': [], 'yticks': []})
     bIsSingleRow = self.row_count == 1
@@ -73,32 +77,38 @@ class AutoMultiImagePlot(object):
     if title is None:
       title = self.title
     fig.suptitle(title)
-
     for nRowIndex, oRowColumns in enumerate(self.rows):
       if len(oRowColumns) > 0:
         sRowTitle = self.row_titles[nRowIndex]
-        nImageCount = len(oRowColumns)
-        nIncr = nImageCount // nColumns
+        nRowImageCount = len(oRowColumns)
+        #nIncr = nImageCount // nRowColumnCount
+        nIncr = 1
         nImageIndex = 0
         for nColIndex in range(nColumns):
-          bMustPlot = True
-          if (nIncr == 0) and (nColIndex > 0):
-            bMustPlot = False
+          bMustPlot = nColIndex < nRowImageCount
+          #if (nIncr == 0) and (nColIndex > 0):
+          #  bMustPlot = False
 
           if bMustPlot:
             dImage = oRowColumns[nImageIndex]
             oSubPlot = oSubplotGrid[nRowIndex, nColIndex]
-            oSubPlot.title.set_text(dImage["title"])
+            sTitle = dImage['title']
+            if sTitle is not None:
+              oSubPlot.title.set_text(sTitle)
+            oSubPlot.set_xticks([])
+            oSubPlot.set_yticks([])
             oSubPlot.imshow(dImage["image"], cmap=dImage["cmap"],
                             aspect=dImage["aspect"], extent=dImage["extend"],
                             vmin=self.min, vmax=self.max
                             )
+
             if nColIndex == 0:
-              oSubPlot.text(0.0, 0.5, sRowTitle, transform=oSubPlot.transAxes,
-                            horizontalalignment='right', verticalalignment='center',
-                            fontsize=9, fontweight='bold')
+              if sRowTitle is not None:
+                oSubPlot.text(0.0, 0.5, sRowTitle, transform=oSubPlot.transAxes,
+                              horizontalalignment='right', verticalalignment='center',
+                              fontsize=9, fontweight='bold')
           nImageIndex += nIncr
-
+    fig.subplots_adjust(wspace=0.1, hspace=0.6)
     return self
 
   # --------------------------------------------------------------------------------------

radnn/plots/plot_confusion_matrix.py

@@ -1,5 +1,10 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
 # Copyright (c) 2020-2025 Pantelis I. Kaplanoglou
 
@@ -21,9 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
-
+# .......................................................................................
 import matplotlib.pyplot as plt
 
 class PlotConfusionMatrix(object):

radnn/plots/plot_learning_curve.py

@@ -1,5 +1,10 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
 # Copyright (c) 2020-2025 Pantelis I. Kaplanoglou
 
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import matplotlib.pyplot as plt
 
 class PlotLearningCurve(object):

radnn/plots/plot_multi_scatter.py

@@ -1,5 +1,10 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
 # Copyright (c) 2022-2025 Pantelis I. Kaplanoglou
 
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import numpy as np
 import matplotlib.pyplot as plt
 from matplotlib import cm

radnn/plots/plot_roc.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2023-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 from sklearn import metrics
 import matplotlib.pyplot as plt
 

radnn/plots/plot_voronoi_2d.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2023-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,9 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
-
+# .......................................................................................
 import matplotlib.pyplot as plt
 import numpy as np
 from matplotlib import cm

radnn/stats/__init__.py

@@ -0,0 +1 @@
+from .descriptive_stats import DescriptiveStats

radnn/stats/descriptive_stats.py

@@ -0,0 +1,45 @@
+import numpy as np
+
+class DescriptiveStats(object):
+  INNER_FENCE_RATIO = 1.5
+  OUTER_FENCE_RATIO = 3.0
+
+  # --------------------------------------------------------------------------------------------------------------------
+  def __init__(self, data):
+    if (data.ndim == 2) and (np.prod(data.shape) == np.max(data.shape)):
+      data = data.reshape(-1)
+
+    self.min = np.min(data)
+    self.max = np.max(data)
+
+    self.mean = np.mean(data)
+    self.std = np.std(data)
+
+    self.q1 = np.percentile(data, q=25)
+    self.median = np.median(data)
+    self.q2 = self.median
+    self.q3 = np.percentile(data, q=75)
+    self.iq_range = self.q3 - self.q1
+
+    self.inner_fence_low = self.q1 - type(self).INNER_FENCE_RATIO * self.iq_range
+    self.inner_fence_high = self.q3 + type(self).INNER_FENCE_RATIO * self.iq_range
+
+    self.outer_fence_low = self.q1 - type(self).OUTER_FENCE_RATIO * self.iq_range
+    self.outer_fence_high = self.q3 + type(self).OUTER_FENCE_RATIO * self.iq_range
+
+  # --------------------------------------------------------------------------------------------------------------------
+  def outliers(self, data, is_using_outer_fence=False, dtype=np.float32):
+    if is_using_outer_fence:
+      nResult = np.asarray([x for x in data if x < self.outer_fence_low or x > self.outer_fence_high], dtype=dtype)
+    else:
+      nResult = np.asarray([x for x in data if x < self.inner_fence_low or x > self.inner_fence_high], dtype=dtype)
+    return nResult
+  # --------------------------------------------------------------------------------------------------------------------
+  def __str__(self):
+    sResult = "range=[%.6f,%.6f] mean=%6f std=%.6f iqrange=%.6f Q1=%.6f median (Q2)=%.6f Q3=%.6f max (Q4)=%.6f" % (self.min, self.max,
+                                                                                                self.mean, self.std,
+                                                                                                self.iq_range,
+                                                                                                self.q1, self.median,
+                                                                                                self.q3, self.max)
+    return sResult
+  # --------------------------------------------------------------------------------------------------------------------

radnn/system/files/__init__.py

@@ -3,4 +3,5 @@ from .jsonfile import JSONFile
 from .picklefile import PickleFile
 from .textfile import TextFile
 from .csvfile import CSVFile
+from .filelist import FileList
 

radnn/system/files/csvfile.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,9 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
-
+# .......................................................................................
 import pandas as pd
 
 

radnn/system/files/filelist.py

@@ -0,0 +1,40 @@
+import os
+
+
+# ======================================================================================================================
+class FileListFullPathIterator(object):
+  # --------------------------------------------------------------------------------------------------------------------
+  def __init__(self, filelist):
+    self.filelist = filelist
+    self.index = 0
+  # --------------------------------------------------------------------------------------------------------------------
+  def __iter__(self):
+    return self
+  # --------------------------------------------------------------------------------------------------------------------
+  def __next__(self):
+    if self.index >= len(self.filelist):
+      raise StopIteration
+    sFileFullPath = os.path.join(self.filelist.parent_folder_path, self.filelist[self.index])
+    self.index += 1
+    return sFileFullPath
+  # --------------------------------------------------------------------------------------------------------------------
+# ======================================================================================================================
+
+
+
+
+
+# ======================================================================================================================
+class FileList(list):
+  # --------------------------------------------------------------------------------------------------------------------
+  def __init__(self, parent_folder_path=None):
+    self.parent_folder_path = parent_folder_path
+  # --------------------------------------------------------------------------------------------------------------------
+  @property
+  def full_paths(self):
+    if self.parent_folder_path is not None:
+      return FileListFullPathIterator(self)
+    else:
+      return None
+  # --------------------------------------------------------------------------------------------------------------------
+# ======================================================================================================================

radnn/system/files/fileobject.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,10 +26,10 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import os
 import glob
+
 class FileObject(object):
   # ----------------------------------------------------------------------------------
   def __init__(self, filename, parent_folder=None, error_template=None, default_file_extension=None):

radnn/system/files/imgfile.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import cv2
 
 

radnn/system/files/jsonfile.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import os
 import json
 import glob

radnn/system/files/picklefile.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,8 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import os
 import sys
 import shutil

radnn/system/files/textfile.py

@@ -1,7 +1,12 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
-# Copyright (c) 2024-2025 Pantelis I. Kaplanoglou
+# Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
 # Permission is hereby granted, free of charge, to any person obtaining a copy
 # of this software and associated documentation files (the "Software"), to deal
@@ -21,10 +26,10 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
+# .......................................................................................
 import os
 import numpy as np
+import locale
 from .fileobject import FileObject
 
 
@@ -33,8 +38,33 @@ class TextFile(FileObject):
   def __init__(self, filename, parent_folder=None, error_template=None, is_verbose=False):
     super(TextFile, self).__init__(filename, parent_folder, error_template)
     self.is_verbose = is_verbose
+
+  # ----------------------------------------------------------------------------------
+  def load(self, filename=None, encoding=None):
+    filename = self._useFileName(filename)
+
+    oEncodingToTry = ["utf-8", "utf-16", "latin1", "ascii"]  # Add more if needed
+
+    sText = None
+    if encoding is None:
+      bIsLoaded = False
+      for sEnc in oEncodingToTry:
+        try:
+          with open(filename, "r", encoding=sEnc) as oFile:
+            sText = oFile.read()
+          bIsLoaded = True
+          break
+        except (UnicodeDecodeError, UnicodeError):
+          continue
+      if not bIsLoaded:
+        raise ValueError("Unsupported encoding")
+    else:
+      with open(filename, "r", encoding=encoding) as oFile:
+        sText = oFile.read()
+
+    return sText
   # --------------------------------------------------------------------------------------------------------------------
-  def save(self, text_obj, filename=None):
+  def save(self, text_obj, filename=None, encoding="utf-8"):
     sFilename = self._useFileName(filename)
 
     """
@@ -57,12 +87,12 @@ class TextFile(FileObject):
       bIsIterable = text_obj.dtype = str
 
     if bIsIterable:
-      with open(sFilename, "w") as oFile:
+      with open(sFilename, "w", encoding=encoding) as oFile:
         for sLine in text_obj:
           print(sLine, file=oFile)
         oFile.close()
     else:
-      with open(sFilename, "w") as oFile:
+      with open(sFilename, "w", encoding=encoding) as oFile:
         print(text_obj, file=oFile)
         oFile.close()
     return True

radnn/system/filestore.py

@@ -1,5 +1,10 @@
+# ======================================================================================
+#
+#     Rapid Deep Neural Networks
+#
+#     Licensed under the MIT License
+# ______________________________________________________________________________________
 # ......................................................................................
-# MIT License
 
 # Copyright (c) 2018-2025 Pantelis I. Kaplanoglou
 
@@ -21,9 +26,7 @@
 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 # SOFTWARE.
 
-# ......................................................................................
-
-
+# .......................................................................................
 import os
 import shutil
 import glob
@@ -32,14 +35,13 @@ if (sys.version_info.major == 3) and (sys.version_info.minor <= 7):
   import pickle5 as pickle
 else:
   import pickle
-
+from radnn.system.files import FileList
 from radnn.system.files import JSONFile
 from radnn.system.files import PickleFile
 from radnn.system.files import TextFile
 from radnn.system.files import CSVFile
-
-from radnn.core import is_opencv_installed
-if (is_opencv_installed()):
+from radnn.ml_system import mlsys
+if mlsys.is_opencv_installed:
   from radnn.system.files.imgfile import PNGFile
 
 
@@ -51,6 +53,7 @@ class FileStore(object):
   def __init__(self, base_folder, is_verbose=False, must_exist=False):
     #.......................... |  Instance Attributes | ............................
     self.base_folder = base_folder
+    self.absolute_path = os.path.abspath(base_folder)
     if not os.path.exists(self.base_folder):
       if must_exist:
         raise Exception(f"File store folder {self.base_folder} does not exist.")
@@ -62,7 +65,7 @@ class FileStore(object):
     self.obj = PickleFile(None, parent_folder=self.base_folder)
     self.text = TextFile(None, parent_folder=self.base_folder)
     self.csv = CSVFile(None, parent_folder=self.base_folder)
-    if (is_opencv_installed()):
+    if mlsys.is_opencv_installed:
       self.img = PNGFile(None, parent_folder=base_folder)
     self.donefs = None
     #................................................................................
@@ -96,7 +99,7 @@ class FileStore(object):
     return self.folder(subfolder_name)
   # --------------------------------------------------------------------------------------------------------
   def folder(self, folder_name):
-    sFolder = os.path.join(self.base_folder, folder_name)
+    sFolder = os.path.join(self.absolute_path, folder_name)
     if not os.path.exists(sFolder):
       os.makedirs(sFolder)
 
@@ -108,13 +111,19 @@ class FileStore(object):
         file_name += "." + file_ext
       else:
         file_name += file_ext
-    return os.path.join(self.base_folder, file_name)
+    return os.path.join(self.absolute_path, file_name)
   # --------------------------------------------------------------------------------------------------------
   def entries(self):
     return os.listdir(self.base_folder)
   # --------------------------------------------------------------------------------------------------------
-  def list_files(self, file_matching_pattern, is_full_path=True, is_removing_extension=False, sort_filename_key=None):
-    sEntries = glob.glob1(self.base_folder, file_matching_pattern)
+  def _ls(self, file_matching_pattern, is_removing_extension, sort_filename_key):
+    if ";" in file_matching_pattern:
+      sEntries = []
+      for sExt in file_matching_pattern.split(";"):
+        sEntries += glob.glob1(self.base_folder, sExt.strip())
+    else:
+      sEntries = glob.glob1(self.base_folder, file_matching_pattern)
+
     if is_removing_extension:
       oFileNamesOnly = []
       for sEntry in sEntries:
@@ -122,15 +131,24 @@ class FileStore(object):
         oFileNamesOnly.append(sFileNameOnly)
       sEntries = sorted(oFileNamesOnly, key=sort_filename_key)
 
+    return sEntries
+  # --------------------------------------------------------------------------------------------------------
+  def list_files(self, file_matching_pattern, is_full_path=True, is_removing_extension=False, sort_filename_key=None):
+    sEntries = self._ls(file_matching_pattern, is_removing_extension, sort_filename_key)
     if is_full_path:
       oResult = [os.path.join(self.base_folder, x) for x in sEntries]
     else:
       oResult = [x for x in sEntries]
-
     return oResult
   # --------------------------------------------------------------------------------------------------------
-  @property
-  def lis_folders(self, is_full_path=True):
+  def filelist(self, file_matching_pattern, is_removing_extension=False, sort_filename_key=None):
+    sEntries = self._ls(file_matching_pattern, is_removing_extension, sort_filename_key)
+    oFileList = FileList(self.base_folder)
+    for x in sEntries:
+      oFileList.append(x)
+    return oFileList
+  # --------------------------------------------------------------------------------------------------------
+  def list_folders(self, is_full_path=True):
     sResult = []
     for sFolder in os.listdir(self.base_folder):
       sFullPath = os.path.join(self.base_folder, sFolder)
@@ -161,10 +179,10 @@ class FileStore(object):
     pass
   # ----------------------------------------------------------------------------------
   def __repr__(self)->str:
-    return self.base_folder
+    return self.absolute_path
   # --------------------------------------------------------------------------------------------------------
   def __str__(self)->str:
-    return self.base_folder
+    return self.absolute_path
   # --------------------------------------------------------------------------------------------------------
 # ======================================================================================================================