pyerualjetwork 4.3.7.dev1__py3-none-any.whl → 4.3.8__py3-none-any.whl

pyerualjetwork/planeat_cuda.py

@@ -19,7 +19,6 @@ import math
 
 
 ### LIBRARY IMPORTS ###
-from .plan_cuda import feed_forward
 from .data_operations_cuda import normalization
 from .ui import loading_bars, initialize_loading_bar
 from .activation_functions_cuda import apply_activation, all_activations
@@ -399,7 +398,7 @@ def evolver(weights,
    return weights, activation_potentiations
 
 
-def evaluate(x_population, weights, activation_potentiations, rl_mode=False, dtype=cp.float32):
+def evaluate(x_population, weights, activation_potentiations):
    """
     Evaluates the performance of a population of genomes, applying different activation functions 
     and weights depending on whether reinforcement learning mode is enabled or not.
@@ -414,64 +413,29 @@ def evaluate(x_population, weights, activation_potentiations, rl_mode=False, dty
         activation_potentiations (list or str): A list where each entry represents an activation function 
                                                 or a potentiation strategy applied to each genome. If only one 
                                                 activation function is used, this can be a single string.
-        
-        rl_mode (bool, optional): If True, reinforcement learning mode is activated, this accepts x_population is a single genome. (Also weights and activation_potentations a single genomes part.)
-                                  Default is False.
-
-                                  
-        dtype (cupy.dtype): Data type for the arrays. np.float32 by default. Example: cp.float64 or cp.float16. [fp32 for balanced devices, fp64 for strong devices, fp16 for weak devices: not reccomended!] (optional)
-
     Returns:
         list: A list of outputs corresponding to each genome in the population after applying the respective 
               activation function and weights.
 
-    Notes:
-        - If `rl_mode` is True:
-            - Accepts x_population is a single genom
-            - The inputs are flattened, and the activation function is applied across the single genom.
-        
-        - If `rl_mode` is False:
-            - Accepts x_population is a list of genomes
-            - Each genome is processed individually, and the results are stored in the `outputs` list.
-        
-        - `feed_forward()` function is the core function that processes the input with the given weights and activation function.
-    
     Example:
         ```python
-        outputs = evaluate(x_population, weights, activation_potentiations, rl_mode=False)
+        outputs = evaluate(x_population, weights, activation_potentiations)
         ```
 
     - The function returns a list of outputs after processing the population, where each element corresponds to 
       the output for each genome in `x_population`.
    """
-   
-   ### IF RL_MODE IS TRUE, A SINGLE GENOME IS ASSUMED AS INPUT, A FEEDFORWARD PREDICTION IS MADE, AND THE OUTPUT(NPARRAY) IS RETURNED:
-   
-   ### IF RL_MODE IS FALSE, PREDICTIONS ARE MADE FOR ALL GENOMES IN THE GROUP USING THEIR CORRESPONDING INDEXED INPUTS AND DATA.
    ### THE OUTPUTS ARE RETURNED AS A PYTHON LIST, WHERE EACH GENOME'S OUTPUT MATCHES ITS INDEX:
    
-   if rl_mode == True:
-      Input = cp.array(x_population, dtype=dtype, copy=False)
-      Input = Input.ravel()
-      
-      if isinstance(activation_potentiations, str):
-         activation_potentiations = [activation_potentiations]
-      
-      outputs = feed_forward(Input=Input, is_training=False, activation_potentiation=activation_potentiations, w=weights)
-      
+   if isinstance(activation_potentiations, str):
+    activation_potentiations = [activation_potentiations]
    else:
-      outputs = [0] * len(x_population)
-      for i, genome in enumerate(x_population):
+    activation_potentiations = [item if isinstance(item, list) else [item] for item in activation_potentiations]
 
-         Input = cp.array(genome)
-         Input = Input.ravel()
+   x_population = apply_activation(x_population, activation_potentiations)
+   result = x_population @ weights.T
 
-         if isinstance(activation_potentiations[i], str):
-            activation_potentiations[i] = [activation_potentiations[i]]
-
-         outputs[i] = feed_forward(Input=Input, is_training=False, activation_potentiation=activation_potentiations[i], w=weights[i])
-
-   return outputs
+   return result
 
 
 def cross_over(first_parent_W,
@@ -757,7 +721,7 @@ def mutation(weight,
          max_threshold = len(activations)
 
          new_threshold = threshold
-
+         
          except_this = ['spiral', 'circular']
          all_acts = [item for item in all_activations() if item not in except_this] # SPIRAL AND CIRCULAR ACTIVATION DISCARDED
          

pyerualjetwork/visualizations.py

@@ -2,7 +2,6 @@ import networkx as nx
 import matplotlib.pyplot as plt
 import numpy as np
 from scipy.spatial import ConvexHull
-import seaborn as sns
 from matplotlib.animation import ArtistAnimation
 
 def draw_neural_web(W, ax, G, return_objs=False):
@@ -323,7 +322,8 @@ def draw_activations(x_train, activation):
     except:
         print('\rWARNING: error in drawing some activation.', end='')
         return x_train
- 
+
+""" DISABLED
 def plot_evaluate(x_test, y_test, y_preds, acc_list, W, activation_potentiation):
     
     from .metrics import metrics, confusion_matrix, roc_curve
@@ -451,7 +451,7 @@ def plot_evaluate(x_test, y_test, y_preds, acc_list, W, activation_potentiation)
         print(f"Hata oluştu: {e}")
 
     plt.show()
-
+"""
 
 def plot_decision_boundary(x, y, activation_potentiation, W, artist=None, ax=None):
     
@@ -614,10 +614,10 @@ def update_neuron_history(LTPW, ax1, row, col, class_count, artist5, fig1, acc=F
 
     fig1.suptitle(suptitle_info, fontsize=16)
 
-
+""" DISABLED
 def initialize_visualization_for_fit(val, show_training, neurons_history, x_train, y_train):
-    """Initializes the visualization setup based on the parameters."""
-    from data_operations import find_closest_factors
+
+    from .data_operations import find_closest_factors
     visualization_objects = {}
 
     if show_training or neurons_history:
@@ -649,32 +649,33 @@ def initialize_visualization_for_fit(val, show_training, neurons_history, x_trai
         })
 
     return visualization_objects
-
+"""
         
-
+""" DISABLED
 def update_neural_web_for_fit(W, ax, G, artist):
-    """
-    The function `update_neural_web_for_fit` updates a neural web visualization for fitting.
-    """
+
     art5_1, art5_2, art5_3 = draw_neural_web(W=W, ax=ax, G=G, return_objs=True)
     art5_list = [art5_1] + [art5_2] + list(art5_3.values())
     artist.append(art5_list)
-
-
+"""
+    
+""" DISABLED
 def update_weight_visualization_for_fit(ax, LTPW, artist2):
-    """Updates the weight visualization plot."""
+
     art2 = ax.imshow(LTPW, interpolation='sinc', cmap='viridis')
     artist2.append([art2])
+"""
 
-
+""" DISABLED
 def update_decision_boundary_for_fit(ax, x_val, y_val, activation_potentiation, LTPW, artist1):
-    """Updates the decision boundary visualization."""
+
     art1_1, art1_2 = plot_decision_boundary(x_val, y_val, activation_potentiation, LTPW, artist=artist1, ax=ax)
     artist1.append([*art1_1.collections, art1_2])
+"""
 
-
+""" DISABLED
 def update_validation_history_for_fit(ax, val_list, artist3):
-    """Updates the validation accuracy history plot."""
+
     period = list(range(1, len(val_list) + 1))
     art3 = ax.plot(
         period, 
@@ -691,20 +692,22 @@ def update_validation_history_for_fit(ax, val_list, artist3):
     ax.set_ylabel('Validation Accuracy')
     ax.set_ylim([0, 1])
     artist3.append(art3)
-
-
+"""
+    
+""" DISABLED
 def display_visualization_for_fit(fig, artist_list, interval):
-    """Displays the animation for the given artist list."""
+
     ani = ArtistAnimation(fig, artist_list, interval=interval, blit=True)
     return ani
-
+"""
+    
 def show():
     plt.tight_layout()
     plt.show()
 
 def initialize_visualization_for_learner(show_history, neurons_history, neural_web_history, x_train, y_train):
-    """Initialize all visualization components"""
-    from data_operations import find_closest_factors
+
+    from .data_operations import find_closest_factors
     viz_objects = {}
     
     if show_history:
@@ -745,7 +748,7 @@ def initialize_visualization_for_learner(show_history, neurons_history, neural_w
     return viz_objects
 
 def update_history_plots_for_learner(viz_objects, depth_list, loss_list, best_acc_per_depth_list, x_train, final_activations):
-    """Update history visualization plots"""
+
     if 'history' not in viz_objects:
         return
     
@@ -772,7 +775,7 @@ def update_history_plots_for_learner(viz_objects, depth_list, loss_list, best_ac
     hist['artist3'].append(art3)
 
 def display_visualizations_for_learner(viz_objects, best_weights, data, best_acc, test_loss, y_train, interval):
-    """Display all final visualizations"""
+
     if 'history' in viz_objects:
         hist = viz_objects['history']
         for _ in range(30):

pyerualjetwork/visualizations_cuda.py

@@ -2,7 +2,6 @@ import networkx as nx
 import matplotlib.pyplot as plt
 import cupy as cp
 from scipy.spatial import ConvexHull
-import seaborn as sns
 from matplotlib.animation import ArtistAnimation
 
 def draw_neural_web(W, ax, G, return_objs=False):
@@ -325,7 +324,7 @@ def draw_activations(x_train, activation):
         print('\rWARNING: error in drawing some activation.', end='')
         return x_train
 
-
+""" DISABLED
 def plot_evaluate(x_test, y_test, y_preds, acc_list, W, activation_potentiation):
     
     from .metrics_cuda import metrics, confusion_matrix, roc_curve
@@ -447,7 +446,7 @@ def plot_evaluate(x_test, y_test, y_preds, acc_list, W, activation_potentiation)
     axs[1,1].set_title('Decision Boundary')
 
     plt.show()
-
+"""
 
 def plot_decision_boundary(x, y, activation_potentiation, W, artist=None, ax=None):
     
@@ -583,9 +582,8 @@ def update_neuron_history(LTPW, ax1, row, col, class_count, artist5, fig1, acc=F
 
     fig1.suptitle(suptitle_info, fontsize=16)
 
-
+""" DISABLED
 def initialize_visualization_for_fit(val, show_training, neurons_history, x_train, y_train):
-    """Initializes the visualization setup based on the parameters."""
     from .data_operations_cuda import find_closest_factors
     visualization_objects = {}
 
@@ -618,33 +616,34 @@ def initialize_visualization_for_fit(val, show_training, neurons_history, x_trai
         })
 
     return visualization_objects
+"""
+    
 
-
+""" DISABLED
 def update_weight_visualization_for_fit(ax, LTPW, artist2):
-    """Updates the weight visualization plot."""
     art2 = ax.imshow(LTPW.get(), interpolation='sinc', cmap='viridis')
     artist2.append([art2])
+"""
 
 def show():
     plt.tight_layout()
     plt.show()
 
+""" DISABLED
 def update_neural_web_for_fit(W, ax, G, artist):
-    """
-    The function `update_neural_web_for_fit` updates a neural web visualization for fitting.
-    """
     art5_1, art5_2, art5_3 = draw_neural_web(W=W, ax=ax, G=G, return_objs=True)
     art5_list = [art5_1] + [art5_2] + list(art5_3.values())
     artist.append(art5_list)
-    
+"""
+
+""" DISABLED
 def update_decision_boundary_for_fit(ax, x_val, y_val, activation_potentiation, LTPW, artist1):
-    """Updates the decision boundary visualization."""
     art1_1, art1_2 = plot_decision_boundary(x_val, y_val, activation_potentiation, LTPW, artist=artist1, ax=ax)
     artist1.append([*art1_1.collections, art1_2])
+"""
 
-
+""" DISABLED
 def update_validation_history_for_fit(ax, val_list, artist3):
-    """Updates the validation accuracy history plot."""
     val_list_cpu = []
     for i in range(len(val_list)):
         val_list_cpu.append(val_list[i].get())
@@ -664,13 +663,12 @@ def update_validation_history_for_fit(ax, val_list, artist3):
     ax.set_ylabel('Validation Accuracy')
     ax.set_ylim([0, 1])
     artist3.append(art3)
-
-
+"""
+""" DISABLED
 def display_visualization_for_fit(fig, artist_list, interval):
-    """Displays the animation for the given artist list."""
     ani = ArtistAnimation(fig, artist_list, interval=interval, blit=True)
     return ani
-
+"""
 def update_neuron_history_for_learner(LTPW, ax1, row, col, class_count, artist5, data, fig1, acc=False, loss=False):
 
     for j in range(len(class_count)):
@@ -699,7 +697,7 @@ def update_neuron_history_for_learner(LTPW, ax1, row, col, class_count, artist5,
     return artist5
 
 def initialize_visualization_for_learner(show_history, neurons_history, neural_web_history, x_train, y_train):
-    """Initialize all visualization components"""
+
     from .data_operations_cuda import find_closest_factors
     viz_objects = {}
     
@@ -741,7 +739,7 @@ def initialize_visualization_for_learner(show_history, neurons_history, neural_w
     return viz_objects
 
 def update_history_plots_for_learner(viz_objects, depth_list, loss_list, best_acc_per_depth_list, x_train, final_activations):
-    """Update history visualization plots"""
+
     if 'history' not in viz_objects:
         return
     
@@ -770,11 +768,11 @@ def update_history_plots_for_learner(viz_objects, depth_list, loss_list, best_ac
         translated_x_train += draw_activations(x, activation)
     
     art3 = hist['ax'][2].plot(x.get(), translated_x_train.get(), color='b', markersize=6, linewidth=2)
-    hist['ax'][2].set_title('Potentiation Shape Over Gen')
+    hist['ax'][2].set_title('Activation Shape Over Gen')
     hist['artist3'].append(art3)
 
 def display_visualizations_for_learner(viz_objects, best_weights, data, best_acc, test_loss, y_train, interval):
-    """Display all final visualizations"""
+
     if 'history' in viz_objects:
         hist = viz_objects['history']
         for _ in range(30):

{pyerualjetwork-4.3.7.dev1.dist-info → pyerualjetwork-4.3.8.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: pyerualjetwork
-Version: 4.3.7.dev1
+Version: 4.3.8
 Summary: PyerualJetwork is a machine learning library supported with GPU(CUDA) acceleration written in Python for professionals and researchers including with PLAN algorithm, PLANEAT algorithm (genetic optimization). Also includes data pre-process and memory manegament
 Author: Hasan Can Beydili
 Author-email: tchasancan@gmail.com
@@ -25,8 +25,6 @@ GitHub Page: https://github.com/HCB06/PyerualJetwork
 YouTube Tutorials: https://www.youtube.com/watch?v=6wMQstZ00is&list=PLNgNWpM7HbsBpCx2VTJ4SK9wcPyse-EHw
 
 	pip install pyerualjetwork
- 
-	'use this if your data small or memory management is a problem :'
 	
 	from pyerualjetwork import plan
 	from pyerualjetwork import planeat
@@ -38,26 +36,11 @@ YouTube Tutorials: https://www.youtube.com/watch?v=6wMQstZ00is&list=PLNgNWpM7Hbs
 	from pyerualjetwork import data_operations_cuda
 	from pyerualjetwork import model_operations_cuda
 	
-	'use this if your data large or memory management is not a problem : _afterburner package (afterburner package comes with powerful paralellism,
-	afterburner with cuda modules offers super-fast training but some memory managemant features and visualization features discarded.
-	Specially designed for LLM training and other massive model training)'
-	
-	from pyerualjetwork_afterburner import plan
-	from pyerualjetwork_afterburner import planeat
-	from pyerualjetwork_afterburner import data_operations
-	from pyerualjetwork_afterburner import model_operations
-	
-	from pyerualjetwork_afterburner import plan_cuda
-	from pyerualjetwork_afterburner import planeat_cuda
-	from pyerualjetwork_afterburner import data_operations_cuda
-	from pyerualjetwork_afterburner import model_operations_cuda
-
       Optimized for Visual Studio Code
       
       requires=[
  	    'scipy==1.13.1',
 	    'tqdm==4.66.4',
-	    'seaborn==0.13.2',
 	    'pandas==2.2.2',
 	    'networkx==3.3',
 	    'numpy==1.26.4',
@@ -67,7 +50,7 @@ YouTube Tutorials: https://www.youtube.com/watch?v=6wMQstZ00is&list=PLNgNWpM7Hbs
 	    'psutil==6.1.1'
         ]
 
-     matplotlib, seaborn, networkx (optional).
+     matplotlib, networkx (optional).
           
 ##############################
 

pyerualjetwork-4.3.8.dist-info/RECORD

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+pyerualjetwork-4.3.8.dist-info/RECORD,,

pyerualjetwork-4.3.8.dist-info/top_level.txt

@@ -0,0 +1 @@
+pyerualjetwork

pyerualjetwork-4.3.7.dev1.dist-info/RECORD

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-pyerualjetwork-4.3.7.dev1.dist-info/WHEEL,sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo,92
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-pyerualjetwork-4.3.7.dev1.dist-info/RECORD,,

pyerualjetwork-4.3.7.dev1.dist-info/top_level.txt

@@ -1,2 +0,0 @@
-pyerualjetwork
-pyerualjetwork_afterburner

pyerualjetwork_afterburner/__init__.py

@@ -1,11 +0,0 @@
-__version__ = "4.3.7dev1-afterburner"
-__update__ = "* Changes: https://github.com/HCB06/PyerualJetwork/blob/main/CHANGES\n* PyerualJetwork Homepage: https://github.com/HCB06/PyerualJetwork/tree/main\n* PyerualJetwork document: https://github.com/HCB06/PyerualJetwork/blob/main/Welcome_to_PyerualJetwork/PYERUALJETWORK_USER_MANUEL_AND_LEGAL_INFORMATION(EN).pdf\n* YouTube tutorials: https://www.youtube.com/@HasanCanBeydili"
-
-def print_version(__version__):
-    print(f"PyerualJetwork Version {__version__}" + '\n')
-
-def print_update_notes(__update__):
-    print(f"Notes:\n{__update__}")
-
-print_version(__version__)
-print_update_notes(__update__)