pyegeria 5.3.6.2.4__py3-none-any.whl → 5.3.6.3__py3-none-any.whl

pyegeria/test_mer.ipynb

@@ -1,596 +0,0 @@
-{
- "cells": [
-  {
-   "cell_type": "code",
-   "id": "initial_id",
-   "metadata": {
-    "collapsed": true
-   },
-   "source": [
-    ""
-   ],
-   "outputs": [],
-   "execution_count": null
-  },
-  {
-   "metadata": {},
-   "cell_type": "code",
-   "source": [
-    "from pyegeria import save_mermaid_graph, render_mermaid, load_mermaid, construct_mermaid_html\n",
-    "from IPython.display import display, HTML"
-   ],
-   "id": "ce93f58829adc918",
-   "outputs": [],
-   "execution_count": null
-  },
-  {
-   "metadata": {},
-   "cell_type": "code",
-   "source": [
-    "s = \"\"\"\n",
-    "\n",
-    "    <div class=\"diagram-container\" style=\"width: 100%; max-width: 800px; margin: auto; padding: 20px; background: white; border: 1px solid #ddd; border-radius: 12px; position: relative;\">\n",
-    "        <h2 class='diagram-header'>Component for Solution Blueprint - Clinical Trial Management Solution Blueprint </h2>\n",
-    "GUID: c4f8d707-7c85-4125-b5fd-c3257a2ef2ef\n",
-    "        <div class=\"pan-zoom-container\" style=\"width: 100%; height: 500px; overflow: hidden; position: relative; background: #f9f9f9; border: 1px solid #ccc; cursor: grab;\">\n",
-    "            <div id=\"Component_for_Solution_Blueprint_-_Clinical_Trial_Management_Solution_Blueprint_\" class=\"mermaid pan-zoom-content\" style=\"position: absolute; transform-origin: 0 0;\">\n",
-    "                flowchart TD\n",
-    "%%{init: {&quot;flowchart&quot;: {&quot;htmlLabels&quot;: false}} }%%\n",
-    "\n",
-    "subgraph c4f8d707-7c85-4125-b5fd-c3257a2ef2ef [Components and Actors]\n",
-    "fc2de77f-7320-48ea-8750-d434c6e870db@{ shape: text, label: &quot;*Description*\n",
-    "**A description of how a clinical trial is managed in Coco Pharmaceuticals.**&quot;}\n",
-    "37b8560d-84d4-434b-9b0d-105420fcc924@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Certify Hospital**&quot;}\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**Clinical Trial Manager**&quot;}\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Certifier&quot;|37b8560d-84d4-434b-9b0d-105420fcc924\n",
-    "72a86eec-9734-4bc0-babb-4fec0aa7c9ff@{ shape: docs, label: &quot;*Solution Component*\n",
-    "**Assemble Treatment Assessment Report**&quot;}\n",
-    "48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5@{ shape: rect, label: &quot;*Solution Component*\n",
-    "**Treatment Efficacy Evidence**&quot;}\n",
-    "48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5--&gt;|&quot;Solution Linking Wire&quot;|72a86eec-9734-4bc0-babb-4fec0aa7c9ff\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Author&quot;|72a86eec-9734-4bc0-babb-4fec0aa7c9ff\n",
-    "b5c8da4c-f925-4cf1-8294-e43cd2c1a584@{ shape: rect, label: &quot;*Solution Component*\n",
-    "**Analyse Patient Data**&quot;}\n",
-    "b5c8da4c-f925-4cf1-8294-e43cd2c1a584--&gt;|&quot;Solution Linking Wire&quot;|48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5\n",
-    "7f5dca65-50b4-4103-9ac7-3a406a09047a@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Weekly Measurements Onboarding Pipeline**&quot;}\n",
-    "07705e15-efff-4f80-8992-f04ac85e0ef1@{ shape: rect, label: &quot;*Solution Component*\n",
-    "**Landing Folder Cataloguer**&quot;}\n",
-    "07705e15-efff-4f80-8992-f04ac85e0ef1--&gt;|&quot;Solution Linking Wire&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Steward&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a\n",
-    "b0290339-c96c-4b05-904f-12fc98e54e14@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**Certified Data Engineer**&quot;}\n",
-    "b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Steward&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a\n",
-    "d48f579f-76d3-4c49-b1b4-575f5645a9d0@{ shape: lin-cyl, label: &quot;*Solution Component*\n",
-    "**Treatment Validation Sandbox**&quot;}\n",
-    "26c07ca4-3b8e-484b-812b-36c1ace4b275@{ shape: rect, label: &quot;*Solution Component*\n",
-    "**Populate Sandbox**&quot;}\n",
-    "26c07ca4-3b8e-484b-812b-36c1ace4b275--&gt;|&quot;Solution Linking Wire&quot;|d48f579f-76d3-4c49-b1b4-575f5645a9d0\n",
-    "ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec@{ shape: processes, label: &quot;*Solution Component*\n",
-    "**Hospital Processes**&quot;}\n",
-    "a8bd84ca-0aae-4534-b0e8-87e8659467a6@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**Clinical Trial Participating Hospital Coordinator**&quot;}\n",
-    "a8bd84ca-0aae-4534-b0e8-87e8659467a6--&gt;|&quot;Coordinator on behalf of hospital&quot;|ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec\n",
-    "30adaab5-8870-47a8-8ae9-facbf84cb05a@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**Clinical Trial Participating Hospital**&quot;}\n",
-    "30adaab5-8870-47a8-8ae9-facbf84cb05a--&gt;|&quot;Owner&quot;|ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec\n",
-    "d48f579f-76d3-4c49-b1b4-575f5645a9d0--&gt;|&quot;Solution Linking Wire&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584\n",
-    "ece17806-836c-4756-b3a2-2d12dde215f6@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**New Treatment Data Scientist**&quot;}\n",
-    "ece17806-836c-4756-b3a2-2d12dde215f6--&gt;|&quot;Data Analyser&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584\n",
-    "0c757e35-8a42-4d5f-b01b-c72a6cea65cc@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**New Treatment Researcher.**&quot;}\n",
-    "0c757e35-8a42-4d5f-b01b-c72a6cea65cc--&gt;|&quot;Results Interpreter&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584\n",
-    "e9c2f911-ffcb-40c6-aeee-8c4d43811576@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Onboard Hospital**&quot;}\n",
-    "b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Initiator&quot;|e9c2f911-ffcb-40c6-aeee-8c4d43811576\n",
-    "849b0b42-f465-452b-813c-477d6398e082@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Set up clinical trial**&quot;}\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Initiator&quot;|849b0b42-f465-452b-813c-477d6398e082\n",
-    "a5d4d638-6836-47e5-99d0-fdcde637e13f@{ shape: lin-cyl, label: &quot;*Solution Component*\n",
-    "**Weekly Measurements Data Lake Folder**&quot;}\n",
-    "7f5dca65-50b4-4103-9ac7-3a406a09047a--&gt;|&quot;Solution Linking Wire&quot;|a5d4d638-6836-47e5-99d0-fdcde637e13f\n",
-    "0bf2547c-937c-41b6-814f-6284849271a1@{ shape: odd, label: &quot;*Solution Component*\n",
-    "**Treatment Assessment Report Validation and Delivery**&quot;}\n",
-    "72a86eec-9734-4bc0-babb-4fec0aa7c9ff--&gt;|&quot;Solution Linking Wire&quot;|0bf2547c-937c-41b6-814f-6284849271a1\n",
-    "f6bc847b-868d-43cc-b767-41f5fe3e47d1@{ shape: trap-t, label: &quot;*Solution Actor Role*\n",
-    "**Clinical Trial Sponsor**&quot;}\n",
-    "f6bc847b-868d-43cc-b767-41f5fe3e47d1--&gt;|&quot;Reviewer&quot;|0bf2547c-937c-41b6-814f-6284849271a1\n",
-    "a5d4d638-6836-47e5-99d0-fdcde637e13f--&gt;|&quot;Solution Linking Wire&quot;|26c07ca4-3b8e-484b-812b-36c1ace4b275\n",
-    "fb32bef2-e79f-4893-b500-2e547f24d482@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Set up Data Lake Folder**&quot;}\n",
-    "b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Initiator&quot;|fb32bef2-e79f-4893-b500-2e547f24d482\n",
-    "1c150d6e-30cf-481c-9afb-3b06c9c9e78f@{ shape: lin-cyl, label: &quot;*Solution Component*\n",
-    "**Hospital Landing Area Folder**&quot;}\n",
-    "ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec--&gt;|&quot;Solution Linking Wire&quot;|1c150d6e-30cf-481c-9afb-3b06c9c9e78f\n",
-    "1c150d6e-30cf-481c-9afb-3b06c9c9e78f--&gt;|&quot;Solution Linking Wire&quot;|07705e15-efff-4f80-8992-f04ac85e0ef1\n",
-    "11c7c850-c67c-41cc-9423-d74db47cbf3a@{ shape: subproc, label: &quot;*Solution Component*\n",
-    "**Nominate Hospital**&quot;}\n",
-    "f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Initiator&quot;|11c7c850-c67c-41cc-9423-d74db47cbf3a\n",
-    "end\n",
-    "style 48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style ece17806-836c-4756-b3a2-2d12dde215f6 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
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-    "style a5d4d638-6836-47e5-99d0-fdcde637e13f color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
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-    "style 30adaab5-8870-47a8-8ae9-facbf84cb05a color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
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-    "style a8bd84ca-0aae-4534-b0e8-87e8659467a6 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
-    "style 0c757e35-8a42-4d5f-b01b-c72a6cea65cc color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
-    "style c4f8d707-7c85-4125-b5fd-c3257a2ef2ef color:#3079ab, fill:#b7c0c7, stroke:#3079ab\n",
-    "style 37b8560d-84d4-434b-9b0d-105420fcc924 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style 11c7c850-c67c-41cc-9423-d74db47cbf3a color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style fc2de77f-7320-48ea-8750-d434c6e870db color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-    "style 849b0b42-f465-452b-813c-477d6398e082 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style 7f5dca65-50b4-4103-9ac7-3a406a09047a color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style 72a86eec-9734-4bc0-babb-4fec0aa7c9ff color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style b5c8da4c-f925-4cf1-8294-e43cd2c1a584 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style f6bc847b-868d-43cc-b767-41f5fe3e47d1 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
-    "style d48f579f-76d3-4c49-b1b4-575f5645a9d0 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "style f37f3735-28a1-4e03-9ff5-3fe2f137f661 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7\n",
-    "style fb32bef2-e79f-4893-b500-2e547f24d482 color:#FFFFFF, fill:#838cc7, stroke:#3079ab\n",
-    "            </div>\n",
-    "        </div>\n",
-    "    </div>\n",
-    "\n",
-    "    <script>\n",
-    "        // Load Mermaid if it's not already loaded\n",
-    "        if (typeof mermaid === \"undefined\") {\n",
-    "            const script = document.createElement('script');\n",
-    "            script.src = \"https://cdn.jsdelivr.net/npm/mermaid/dist/mermaid.min.js\";\n",
-    "            script.onload = () => renderMermaidGraph();\n",
-    "            document.head.appendChild(script);\n",
-    "        } else {\n",
-    "            // Mermaid already loaded, render the graph immediately\n",
-    "            renderMermaidGraph();\n",
-    "        }\n",
-    "\n",
-    "        function renderMermaidGraph() {\n",
-    "            mermaid.initialize({ startOnLoad: true });\n",
-    "\n",
-    "            const container = document.querySelector('.pan-zoom-container');\n",
-    "            const content = document.querySelector('.pan-zoom-content');\n",
-    "\n",
-    "            let scale = 1; // Current zoom level\n",
-    "            let panX = 0;  // X-axis pan\n",
-    "            let panY = 0;  // Y-axis pan\n",
-    "            let isDragging = false;\n",
-    "            let startX, startY;\n",
-    "\n",
-    "            // Apply transformations\n",
-    "            const applyTransform = () => {\n",
-    "                content.style.transform = `translate(${panX}px, ${panY}px) scale(${scale})`;\n",
-    "            };\n",
-    "\n",
-    "            // Fit diagram to container\n",
-    "            const centerAndFitDiagram = () => {\n",
-    "                const containerRect = container.getBoundingClientRect();\n",
-    "                const rect = content.getBoundingClientRect();\n",
-    "\n",
-    "                scale = Math.min(\n",
-    "                    containerRect.width / rect.width,\n",
-    "                    containerRect.height / rect.height\n",
-    "                );\n",
-    "\n",
-    "                panX = (containerRect.width - rect.width * scale) / 2;\n",
-    "                panY = (containerRect.height - rect.height * scale) / 2;\n",
-    "\n",
-    "                applyTransform();\n",
-    "            };\n",
-    "\n",
-    "            // Zoom functionality\n",
-    "            container.addEventListener('wheel', function(event) {\n",
-    "                event.preventDefault();\n",
-    "                const zoomSpeed = 0.1;\n",
-    "                const previousScale = scale;\n",
-    "\n",
-    "                if (event.deltaY < 0) {\n",
-    "                    scale = Math.min(scale + zoomSpeed, 4);\n",
-    "                } else {\n",
-    "                    scale = Math.max(scale - zoomSpeed, 0.5);\n",
-    "                }\n",
-    "\n",
-    "                const zoomRatio = scale / previousScale;\n",
-    "                const clientRect = container.getBoundingClientRect();\n",
-    "\n",
-    "                panX -= (event.clientX - clientRect.left) * (zoomRatio - 1);\n",
-    "                panY -= (event.clientY - clientRect.top) * (zoomRatio - 1);\n",
-    "\n",
-    "                applyTransform();\n",
-    "            });\n",
-    "\n",
-    "            // Drag functionality\n",
-    "            container.addEventListener('mousedown', function(event) {\n",
-    "                isDragging = true;\n",
-    "                startX = event.clientX - panX;\n",
-    "                startY = event.clientY - panY;\n",
-    "                container.style.cursor = \"grabbing\";\n",
-    "            });\n",
-    "\n",
-    "            container.addEventListener('mousemove', function(event) {\n",
-    "                if (!isDragging) return;\n",
-    "\n",
-    "                panX = event.clientX - startX;\n",
-    "                panY = event.clientY - startY;\n",
-    "\n",
-    "                applyTransform();\n",
-    "            });\n",
-    "\n",
-    "            container.addEventListener('mouseup', function() {\n",
-    "                isDragging = false;\n",
-    "                container.style.cursor = \"grab\";\n",
-    "            });\n",
-    "\n",
-    "            container.addEventListener('mouseleave', function() {\n",
-    "                isDragging = false;\n",
-    "                container.style.cursor = \"grab\";\n",
-    "            });\n",
-    "\n",
-    "            setTimeout(centerAndFitDiagram, 200);\n",
-    "        }\n",
-    "    </script>\n",
-    "    \"\"\""
-   ],
-   "id": "6f8c28251d1dfa9f",
-   "outputs": [],
-   "execution_count": null
-  },
-  {
-   "metadata": {
-    "ExecuteTime": {
-     "end_time": "2025-02-07T01:29:56.716699Z",
-     "start_time": "2025-02-07T01:29:56.414355Z"
-    }
-   },
-   "cell_type": "code",
-   "source": [
-    "from pyegeria.egeria_tech_client import EgeriaTech\n",
-    "from pyegeria.mermaid_utilities import render_mermaid, construct_mermaid_html, load_mermaid\n",
-    "from IPython.display import display, HTML\n",
-    "\n",
-    "c = EgeriaTech('qs-view-server','https://localhost:9443','erinoverview','secret')\n",
-    "c.create_egeria_bearer_token()"
-   ],
-   "id": "2adde043f97ae76a",
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "'eyJraWQiOiI1NTNhNTIzOC1iNDFjLTQyZTItOTM2YS1iMGE3NjQ5YWFlOWQiLCJhbGciOiJSUzI1NiJ9.eyJpc3MiOiJzZWxmIiwic3ViIjoiZXJpbm92ZXJ2aWV3IiwiZXhwIjoxNzM4ODk1Mzk2LCJpYXQiOjE3Mzg4OTE3OTYsImRpc3BsYXlOYW1lIjoiRXJpbiBPdmVydmlldyJ9.roGnq2SiZYJ2u60waVkpd2zKdK2PeEpVf0D7L4-UTQyHmlQKjpzRdqgBUXy7B2kcgN2iEKloNaYXimdM23mQdqZrCIWGu8g_-Wt5fdSIX1ZU8QTIKa6oXJt-fKZCGGpHrRArfuQNrGm1q_k64pQa98ABc1OZkr6Z9Uorboxr7q73rOzfS-RRuKnsxyM9xKUBBMLXfrKiz8NZVX82ao46ihi2_c7EJ4PofGM4aAY1A5mgB2zOvEms2JTb6LU3I_3aexgg9JRBBUsCqf-RcRfsSnG-MZN93ry7rZAVeVx2oXCtA9xvk8oZ5k3FCk0Zxi7Yv2qku-9Igdqto1tVXVmeCw'"
-      ]
-     },
-     "execution_count": 1,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
-   "execution_count": 1
-  },
-  {
-   "metadata": {
-    "ExecuteTime": {
-     "end_time": "2025-02-07T01:30:00.016156Z",
-     "start_time": "2025-02-07T01:29:57.976937Z"
-    }
-   },
-   "cell_type": "code",
-   "source": [
-    "bp = c.find_solution_blueprints('Clinical')\n",
-    "sc = c.find_information_supply_chains('Clinical')\n",
-    "g1 = bp[0]['mermaidGraph']\n",
-    "s1 = sc[0]['mermaidGraph']"
-   ],
-   "id": "1f48750fa8f194c9",
-   "outputs": [],
-   "execution_count": 2
-  },
-  {
-   "metadata": {
-    "ExecuteTime": {
-     "end_time": "2025-02-07T01:30:01.757080Z",
-     "start_time": "2025-02-07T01:30:01.754630Z"
-    }
-   },
-   "cell_type": "code",
-   "source": "print(s1)",
-   "id": "ebc1d9451ffb8698",
-   "outputs": [
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "---\n",
-      "title: Information Supply Chain - Clinical Trial Subject Onboarding [39a035f0-3b2b-45fe-adb8-ee8a19581f6a]\n",
-      "---\n",
-      "flowchart TD\n",
-      "%%{init: {\"flowchart\": {\"htmlLabels\": false}} }%%\n",
-      "\n",
-      "39a035f0-3b2b-45fe-adb8-ee8a19581f6a@{ shape: flip-tri, label: \"*Information Supply Chain*\n",
-      "**Clinical Trial Subject Onboarding**\"}\n",
-      "384f2dce-60be-4ad1-8993-1f3b6070e8ee@{ shape: text, label: \"*Description*\n",
-      "**Delivering the data necessary to add a person as a subject in a clinical trial.**\"}\n",
-      "39a035f0-3b2b-45fe-adb8-ee8a19581f6a~~~384f2dce-60be-4ad1-8993-1f3b6070e8ee\n",
-      "1195927b-9aca-4716-8cd4-2e2f30a13bf2@{ shape: text, label: \"*Purpose*\n",
-      "**Ensure patient subject is aware of the process and potential risks in participation.**\"}\n",
-      "384f2dce-60be-4ad1-8993-1f3b6070e8ee~~~1195927b-9aca-4716-8cd4-2e2f30a13bf2\n",
-      "df4be8f9-f3cc-4af3-89cf-df27b3575460@{ shape: text, label: \"*Purpose*\n",
-      "**Ensure patient subject has given permission for Coco Pharmaceuticals to acquire, store and process their personal data needed for the clinical trial.**\"}\n",
-      "1195927b-9aca-4716-8cd4-2e2f30a13bf2~~~df4be8f9-f3cc-4af3-89cf-df27b3575460\n",
-      "5d8b5071-d707-437a-be43-6e4487e8b04d@{ shape: text, label: \"*Purpose*\n",
-      "**Ensure incoming data is validated and catalogued.**\"}\n",
-      "df4be8f9-f3cc-4af3-89cf-df27b3575460~~~5d8b5071-d707-437a-be43-6e4487e8b04d\n",
-      "1da03445-e4d6-4769-9cf6-b8810822c943@{ shape: text, label: \"*Purpose*\n",
-      "**Ensure data and process owners are informed of key milestones and issues requiring attention.**\"}\n",
-      "5d8b5071-d707-437a-be43-6e4487e8b04d~~~1da03445-e4d6-4769-9cf6-b8810822c943\n",
-      "614ca1a4-bc66-44ff-b9e5-34c1ba4edecc@{ shape: text, label: \"*Purpose*\n",
-      "**Ensure the process of data capture and validation is transparent and auditable.**\"}\n",
-      "1da03445-e4d6-4769-9cf6-b8810822c943~~~614ca1a4-bc66-44ff-b9e5-34c1ba4edecc\n",
-      "style 39a035f0-3b2b-45fe-adb8-ee8a19581f6a color:#FFFFFF, fill:#004563, stroke:#b7c0c7\n",
-      "style 1da03445-e4d6-4769-9cf6-b8810822c943 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "style 5d8b5071-d707-437a-be43-6e4487e8b04d color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "style 384f2dce-60be-4ad1-8993-1f3b6070e8ee color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "style 614ca1a4-bc66-44ff-b9e5-34c1ba4edecc color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "style 1195927b-9aca-4716-8cd4-2e2f30a13bf2 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "style df4be8f9-f3cc-4af3-89cf-df27b3575460 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-      "\n"
-     ]
-    }
-   ],
-   "execution_count": 3
-  },
-  {
-   "metadata": {
-    "ExecuteTime": {
-     "end_time": "2025-02-07T01:30:03.540438Z",
-     "start_time": "2025-02-07T01:30:03.537172Z"
-    }
-   },
-   "cell_type": "code",
-   "source": "load_mermaid()",
-   "id": "b83a08cff7bc5c8f",
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "<IPython.core.display.HTML object>"
-      ],
-      "text/html": [
-       "\n",
-       "    <script src=\"https://unpkg.com/mermaid@11.4.1/dist/mermaid.min.js\"></script>\n",
-       "    <script>\n",
-       "        document.addEventListener('DOMContentLoaded', function() {\n",
-       "            mermaid.initialize({startOnLoad: true});\n",
-       "        });\n",
-       "    </script>\n",
-       "\n",
-       "    "
-      ]
-     },
-     "metadata": {},
-     "output_type": "display_data"
-    }
-   ],
-   "execution_count": 4
-  },
-  {
-   "metadata": {
-    "ExecuteTime": {
-     "end_time": "2025-02-07T01:30:04.918794Z",
-     "start_time": "2025-02-07T01:30:04.915949Z"
-    }
-   },
-   "cell_type": "code",
-   "source": "render_mermaid(s1)",
-   "id": "245bb4b173d65a6a",
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "<IPython.core.display.HTML object>"
-      ],
-      "text/html": [
-       "\n",
-       "    <div id=\"Information_Supply_Chain_-_Clinical_Trial_Subject_Onboarding_-container\" class=\"diagram-container\" \n",
-       "         style=\"width: 90%; max-width: 800px; margin: auto; padding: 20px; \n",
-       "                background: white; border: 1px solid #ddd; \n",
-       "                border-radius: 12px; position: relative;\">\n",
-       "        \n",
-       "        <h2 style=\"text-align: center; color: #007acc; margin-bottom: 16px;\">\n",
-       "            Information Supply Chain - Clinical Trial Subject Onboarding \n",
-       "        </h2>\n",
-       "        \n",
-       "        <div class=\"pan-zoom-container\" \n",
-       "             style=\"width: 100%; height: 500px; overflow: hidden; \n",
-       "                    position: relative; background: #f9f9f9; \n",
-       "                    border: 1px solid #ccc; cursor: grab;\">\n",
-       "            <div id=\"Information_Supply_Chain_-_Clinical_Trial_Subject_Onboarding_\" class=\"mermaid pan-zoom-content\" \n",
-       "                 style=\"position: absolute; transform-origin: 0 0;\">\n",
-       "                flowchart TD\n",
-       "%%{init: {&quot;flowchart&quot;: {&quot;htmlLabels&quot;: false}} }%%\n",
-       "\n",
-       "39a035f0-3b2b-45fe-adb8-ee8a19581f6a@{ shape: flip-tri, label: &quot;*Information Supply Chain*\n",
-       "**Clinical Trial Subject Onboarding**&quot;}\n",
-       "384f2dce-60be-4ad1-8993-1f3b6070e8ee@{ shape: text, label: &quot;*Description*\n",
-       "**Delivering the data necessary to add a person as a subject in a clinical trial.**&quot;}\n",
-       "39a035f0-3b2b-45fe-adb8-ee8a19581f6a~~~384f2dce-60be-4ad1-8993-1f3b6070e8ee\n",
-       "1195927b-9aca-4716-8cd4-2e2f30a13bf2@{ shape: text, label: &quot;*Purpose*\n",
-       "**Ensure patient subject is aware of the process and potential risks in participation.**&quot;}\n",
-       "384f2dce-60be-4ad1-8993-1f3b6070e8ee~~~1195927b-9aca-4716-8cd4-2e2f30a13bf2\n",
-       "df4be8f9-f3cc-4af3-89cf-df27b3575460@{ shape: text, label: &quot;*Purpose*\n",
-       "**Ensure patient subject has given permission for Coco Pharmaceuticals to acquire, store and process their personal data needed for the clinical trial.**&quot;}\n",
-       "1195927b-9aca-4716-8cd4-2e2f30a13bf2~~~df4be8f9-f3cc-4af3-89cf-df27b3575460\n",
-       "5d8b5071-d707-437a-be43-6e4487e8b04d@{ shape: text, label: &quot;*Purpose*\n",
-       "**Ensure incoming data is validated and catalogued.**&quot;}\n",
-       "df4be8f9-f3cc-4af3-89cf-df27b3575460~~~5d8b5071-d707-437a-be43-6e4487e8b04d\n",
-       "1da03445-e4d6-4769-9cf6-b8810822c943@{ shape: text, label: &quot;*Purpose*\n",
-       "**Ensure data and process owners are informed of key milestones and issues requiring attention.**&quot;}\n",
-       "5d8b5071-d707-437a-be43-6e4487e8b04d~~~1da03445-e4d6-4769-9cf6-b8810822c943\n",
-       "614ca1a4-bc66-44ff-b9e5-34c1ba4edecc@{ shape: text, label: &quot;*Purpose*\n",
-       "**Ensure the process of data capture and validation is transparent and auditable.**&quot;}\n",
-       "1da03445-e4d6-4769-9cf6-b8810822c943~~~614ca1a4-bc66-44ff-b9e5-34c1ba4edecc\n",
-       "style 39a035f0-3b2b-45fe-adb8-ee8a19581f6a color:#FFFFFF, fill:#004563, stroke:#b7c0c7\n",
-       "style 1da03445-e4d6-4769-9cf6-b8810822c943 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "style 5d8b5071-d707-437a-be43-6e4487e8b04d color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "style 384f2dce-60be-4ad1-8993-1f3b6070e8ee color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "style 614ca1a4-bc66-44ff-b9e5-34c1ba4edecc color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "style 1195927b-9aca-4716-8cd4-2e2f30a13bf2 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "style df4be8f9-f3cc-4af3-89cf-df27b3575460 color:#000000, fill:#F9F7ED, stroke:#b7c0c7\n",
-       "            </div>\n",
-       "        </div>\n",
-       "    </div>\n",
-       "\n",
-       "    <script>\n",
-       "        (function() {\n",
-       "            // Check if Mermaid.js is already loaded; load if not\n",
-       "            if (typeof mermaid === \"undefined\") {\n",
-       "                const script = document.createElement('script');\n",
-       "                script.src = \"https://cdn.jsdelivr.net/npm/mermaid/dist/mermaid.min.js\";\n",
-       "                script.onload = () => initializeMermaid();\n",
-       "                document.head.appendChild(script);\n",
-       "            } else {\n",
-       "                initializeMermaid();\n",
-       "            }\n",
-       "\n",
-       "            function initializeMermaid() {\n",
-       "                // Re-render the Mermaid chart\n",
-       "                mermaid.initialize({ startOnLoad: true });\n",
-       "                mermaid.init(undefined, document.querySelector(\"#Information_Supply_Chain_-_Clinical_Trial_Subject_Onboarding_\"));\n",
-       "\n",
-       "                // Add interactivity for pan and zoom\n",
-       "                const container = document.querySelector('.pan-zoom-container');\n",
-       "                const content = document.querySelector('.pan-zoom-content');\n",
-       "\n",
-       "                let scale = 1;  // Current zoom level\n",
-       "                let panX = 0;   // X-axis pan\n",
-       "                let panY = 0;   // Y-axis pan\n",
-       "                let isDragging = false;\n",
-       "                let startX, startY;\n",
-       "\n",
-       "                // Apply Transformations\n",
-       "                const applyTransform = () => {\n",
-       "                    content.style.transform = `translate(${panX}px, ${panY}px) scale(${scale})`;\n",
-       "                };\n",
-       "\n",
-       "                // Center Diagram on Load\n",
-       "                const centerAndFitDiagram = () => {\n",
-       "                    const containerRect = container.getBoundingClientRect();\n",
-       "                    const rect = content.getBoundingClientRect();\n",
-       "\n",
-       "                    scale = Math.min(\n",
-       "                        containerRect.width / rect.width,\n",
-       "                        containerRect.height / rect.height\n",
-       "                    );\n",
-       "\n",
-       "                    panX = (containerRect.width - rect.width * scale) / 2;\n",
-       "                    panY = (containerRect.height - rect.height * scale) / 2;\n",
-       "\n",
-       "                    applyTransform();\n",
-       "                };\n",
-       "\n",
-       "                setTimeout(centerAndFitDiagram, 200); // Allow rendering time\n",
-       "\n",
-       "                // Enable Mouse-Wheel Zoom\n",
-       "                container.addEventListener('wheel', (event) => {\n",
-       "                    event.preventDefault();\n",
-       "                    const zoomSpeed = 0.1;\n",
-       "                    const previousScale = scale;\n",
-       "\n",
-       "                    if (event.deltaY < 0) {\n",
-       "                        scale = Math.min(scale + zoomSpeed, 4);\n",
-       "                    } else {\n",
-       "                        scale = Math.max(scale - zoomSpeed, 0.5);\n",
-       "                    }\n",
-       "\n",
-       "                    const zoomRatio = scale / previousScale;\n",
-       "                    const clientRect = container.getBoundingClientRect();\n",
-       "\n",
-       "                    panX -= (event.clientX - clientRect.left) * (zoomRatio - 1);\n",
-       "                    panY -= (event.clientY - clientRect.top) * (zoomRatio - 1);\n",
-       "\n",
-       "                    applyTransform();\n",
-       "                });\n",
-       "\n",
-       "                // Enable Drag-to-Pan\n",
-       "                container.addEventListener('mousedown', (event) => {\n",
-       "                    isDragging = true;\n",
-       "                    startX = event.clientX - panX;\n",
-       "                    startY = event.clientY - panY;\n",
-       "                    container.style.cursor = \"grabbing\";\n",
-       "                });\n",
-       "\n",
-       "                container.addEventListener('mousemove', (event) => {\n",
-       "                    if (!isDragging) return;\n",
-       "\n",
-       "                    panX = event.clientX - startX;\n",
-       "                    panY = event.clientY - startY;\n",
-       "\n",
-       "                    applyTransform();\n",
-       "                });\n",
-       "\n",
-       "                container.addEventListener('mouseup', () => {\n",
-       "                    isDragging = false;\n",
-       "                    container.style.cursor = \"grab\";\n",
-       "                });\n",
-       "\n",
-       "                container.addEventListener('mouseleave', () => {\n",
-       "                    isDragging = false;\n",
-       "                    container.style.cursor = \"grab\";\n",
-       "                });\n",
-       "            }\n",
-       "        })();\n",
-       "    </script>\n",
-       "\n",
-       "    "
-      ]
-     },
-     "metadata": {},
-     "output_type": "display_data"
-    }
-   ],
-   "execution_count": 5
-  },
-  {
-   "metadata": {},
-   "cell_type": "code",
-   "source": "print(construct_mermaid_html(s1))",
-   "id": "81dfb284e894fa3",
-   "outputs": [],
-   "execution_count": null
-  },
-  {
-   "metadata": {},
-   "cell_type": "code",
-   "source": "",
-   "id": "dec9454145d5dc79",
-   "outputs": [],
-   "execution_count": null
-  }
- ],
- "metadata": {
-  "kernelspec": {
-   "display_name": "Python 3",
-   "language": "python",
-   "name": "python3"
-  },
-  "language_info": {
-   "codemirror_mode": {
-    "name": "ipython",
-    "version": 2
-   },
-   "file_extension": ".py",
-   "mimetype": "text/x-python",
-   "name": "python",
-   "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython2",
-   "version": "2.7.6"
-  }
- },
- "nbformat": 4,
- "nbformat_minor": 5
-}