pyadps 0.1.0__py3-none-any.whl → 0.1.0b0__py3-none-any.whl

pyadps/utils/sensor_health.py

@@ -1,120 +0,0 @@
-import numpy as np
-
-
-def sound_speed_correction(
-    velocity: np.ndarray,
-    sound_speed: np.ndarray,
-    temperature: np.ndarray,
-    salinity: np.ndarray,
-    depth: np.ndarray,
-    horizontal: bool = True,
-) -> np.ndarray:
-    """
-    Corrects velocity measurements for variations in sound speed.
-
-    The function calculates the corrected sound speed based on temperature,
-    salinity, and depth using empirical equations. It then adjusts the velocity
-    measurements for the u and v components using the ratio of the original
-    and corrected sound speeds, while leaving the w component unchanged by default.
-
-    Parameter:
-    ----------
-        velocity (numpy.ndarray): 4D array of velocity measurements in m/s with
-            components (u, v, w, error) along depth and time axes. Missing values
-            should be represented by -32768.
-        sound_speed (numpy.ndarray): 1D array of measured sound speed in m/s as a function of time.
-        temperature (numpy.ndarray): 1D array of temperature in degrees Celsius as a function of time.
-        salinity (numpy.ndarray): 1D array of salinity in PSU (Practical Salinity Units) as a function of time.
-        depth (numpy.ndarray): 1D array of transducer depth in meters as a function of time.
-        horizontal (bool): By default only horizontal velocities are corrected.
-
-    Returns:
-    --------
-        numpy.ndarray: 3D array of corrected velocity measurements as 32-bit integers.
-        The w component remains unchanged. Missing values (-32768) remain unchanged.
-
-    Notes:
-    ------
-        The sound speed correction formula is derived empirically using the
-        equation (Urick, 1983).
-    """
-    # Calculate corrected sound speed
-    sound_speed_corrected = (
-        1449.2
-        + 4.6 * temperature
-        - 0.055 * temperature**2
-        + 0.00029 * temperature**3
-        + (1.34 - 0.01 * temperature) * (salinity - 35)
-        + 0.016 * depth
-    )
-
-    sound_speed = sound_speed
-    sound_speed_corrected = sound_speed_corrected
-    # Separate u, v, and w components
-    u = velocity[0, :, :]
-    v = velocity[1, :, :]
-    w = velocity[2, :, :]
-    e = velocity[3, :, :]
-
-    # Correct u and v components
-    u_corrected = np.where(
-        u == -32768,
-        -32768.0,
-        u * sound_speed[np.newaxis, :] / sound_speed_corrected[np.newaxis, :],
-    )
-
-    v_corrected = np.where(
-        v == -32768,
-        -32768.0,
-        v * sound_speed[np.newaxis, :] / sound_speed_corrected[np.newaxis, :],
-    )
-
-    if not horizontal:
-        w_corrected = np.where(
-            w == -32768,
-            -32768.0,
-            w * sound_speed[np.newaxis, :] / sound_speed_corrected[np.newaxis, :],
-        )
-    else:
-        w_corrected = w
-
-    # Combine corrected components back into a 4D array
-    velocity_corrected = np.stack(
-        [
-            u_corrected.astype(np.int32),
-            v_corrected.astype(np.int32),
-            w_corrected.astype(np.int32),
-            e.astype(np.int32),
-        ],
-        axis=0,
-    )
-
-    return velocity_corrected
-
-
-def tilt_sensor_check(
-    tilt: np.ndarray, mask: np.ndarray, cutoff: int = 15
-) -> np.ndarray:
-    """
-    Updates the given 2D mask array based on the tilt sensor readings. If the tilt value in
-    the 1D tilt array exceeds the specified cutoff, the corresponding values in the mask are
-    set to 1.
-
-    Parameters
-    ----------
-    tilt : np.ndarray
-        A 1D array of tilt sensor readings.
-    mask : np.ndarray
-        A 2D array where the tilt values are checked against the cutoff.
-    cutoff : int, optional
-        The tilt value threshold. Default is 15. If a tilt value exceeds this threshold,
-        the corresponding mask value is updated to 1.
-
-    Returns
-    -------
-    np.ndarray
-        A 2D array with updated mask values where tilt exceeds the cutoff.
-    """
-    tilt = tilt * 0.01
-    updated_mask = np.where(tilt[:, np.newaxis] > cutoff, 1, mask.T)
-    return updated_mask.T

pyadps-0.1.0.dist-info/RECORD

@@ -1,33 +0,0 @@
-pyadps/Home_Page.py,sha256=j_-3fsp1hkhpNEl5jE-CEQvClDGpMi1H3ZQPXfuKWBg,1782
-pyadps/__init__.py,sha256=bNCm6_WIhiwvaUeOZhRkyLZyzzUKfSH80Fslg0JPJyk,232
-pyadps/__main__.py,sha256=cIFUayxPnKl00oIR99L6IUEvc8trW7dijtfBQCAen5c,356
-pyadps/pages/01_Read_File.py,sha256=MaBtdMrd1m6aox8O7IxVdMeoS5kYEiaossop_U3w6I8,14324
-pyadps/pages/02_View_Raw_Data.py,sha256=AhT7gvDbcMRPf-WIBzTQ0o-nn9_q7NH6plTlpMtgzaY,6170
-pyadps/pages/03_Download_Raw_File.py,sha256=3887Lj5h1IZTHFpPfc0fYT7oJ2qdMJtJj6X6fmHT9zw,9524
-pyadps/pages/04_Sensor_Health.py,sha256=XQ7oTZ9LCrKDclVZPKQVsBtyDShdyHZfVhzCTRGZY0g,33905
-pyadps/pages/05_QC_Test.py,sha256=8wt7h-RHLOf3GZ8-B_kXA0IqzHTBwW_H7YQFEk5EM6E,15904
-pyadps/pages/06_Profile_Test.py,sha256=VQDI1zpm-ZnN7HrqFnYgwkNYFRQtQYafWvqQA7H9uRk,34767
-pyadps/pages/07_Velocity_Test.py,sha256=lzMBmWmnVu4MDXof_40312aL1eUh79mdzEZyZowZXcM,23008
-pyadps/pages/08_Write_File.py,sha256=pXa1qUPegQ8nnZ9e65oE7GkuMPJ23TPM5956HlLN_PM,21540
-pyadps/pages/09_Auto_process.py,sha256=gOvLEfwAPxe9v-W8DASKSuNQzB5BjHLnPkwUgOufwdI,1776
-pyadps/pages/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-pyadps/utils/__init__.py,sha256=nCqRp-OT_1BC7RnL3ARUIldlw9sWyr1XqQvQid-B4ts,407
-pyadps/utils/autoprocess.py,sha256=QBwu-CeQUmKn0B6usHthW0v78TeFLxC7k6s0ZPEZAuo,19507
-pyadps/utils/metadata/config.ini,sha256=TC7htzGwUukIXt_u3JR5ycyvOoDj_JxWgGY6khjNeck,2154
-pyadps/utils/metadata/demo.000,sha256=qxB3sgjABrpv4DNXkwjpbSxk5sc4UwAI8kgQX0--PM8,234468
-pyadps/utils/metadata/flmeta.json,sha256=diIB9nht_0uw9YJNSFGdZYGzeVbR-07zIZS9Nf4VPSE,14245
-pyadps/utils/metadata/vlmeta.json,sha256=_dkQlGkkUvpAIM7S6kEUenSaiCpOrwXg8n1aU3dDF3s,22535
-pyadps/utils/plotgen.py,sha256=-A5fN2WoCZevt_SLT5OKSeYCzfv3rGG4tw7p1qzFjeA,26344
-pyadps/utils/profile_test.py,sha256=kcqdFigL2wQwMRrKyfNzfGIYcFwRj1_945lEpIio6pQ,20173
-pyadps/utils/pyreadrdi.py,sha256=P1UTDrglgbYn3XQGUTsqNPynDGE-zp4cI_TW8yfOlic,35090
-pyadps/utils/readrdi.py,sha256=ullqqWL-tvK3V9fjX8kpPwRpWhmRZy-CyA240gmcdr4,50012
-pyadps/utils/script.py,sha256=Ti7IkbKSh4PwD4QPpCHSjLZHledFxr6QH3950X4bKbk,6534
-pyadps/utils/sensor_health.py,sha256=aHRaU4kMJZ9dGmYypKpCCgq-owWoNjvcl1I_9I7dG68,3973
-pyadps/utils/signal_quality.py,sha256=dohaMtJT_MCeyxF__zMRy36_rMmVZqU5vCdW1AYH35s,16239
-pyadps/utils/velocity_test.py,sha256=-95NKLQJ8Ni8etdxhDHxsfMF4MdRWcXL9fgLgWy7Kn0,6112
-pyadps/utils/writenc.py,sha256=H5rH2dfUECLukql5zNymAwEtMib8-PJo3y5e3_NIRsk,9754
-pyadps-0.1.0.dist-info/LICENSE,sha256=sfY_7DzQF5FxnO2T6ek74dfm5uBmwEp1oEg_WlzNsb8,1092
-pyadps-0.1.0.dist-info/METADATA,sha256=oksHGBkVVf06YhJXIKvMmY7Pf8dobyanFdPxBd33cpk,4461
-pyadps-0.1.0.dist-info/WHEEL,sha256=RaoafKOydTQ7I_I3JTrPCg6kUmTgtm4BornzOqyEfJ8,88
-pyadps-0.1.0.dist-info/entry_points.txt,sha256=-oZhbbJq8Q29uNVh5SmzOLp9OeFM9VUzHVxovfI4LXA,126
-pyadps-0.1.0.dist-info/RECORD,,

pyadps-0.1.0.dist-info/entry_points.txt

@@ -1,5 +0,0 @@
-[console_scripts]
-run-auto=pyadps.utils.autoprocess:main
-run-pyadps=pyadps.__main__:main
-run-script=pyadps.utils.script:main
-