pyTEMlib 0.2025.4.1__py3-none-any.whl → 0.2025.9.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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- build/lib/pyTEMlib/__init__.py +33 -0
- build/lib/pyTEMlib/animation.py +640 -0
- build/lib/pyTEMlib/atom_tools.py +238 -0
- build/lib/pyTEMlib/config_dir.py +31 -0
- build/lib/pyTEMlib/crystal_tools.py +1219 -0
- build/lib/pyTEMlib/diffraction_plot.py +756 -0
- build/lib/pyTEMlib/dynamic_scattering.py +293 -0
- build/lib/pyTEMlib/eds_tools.py +826 -0
- build/lib/pyTEMlib/eds_xsections.py +432 -0
- build/lib/pyTEMlib/eels_tools/__init__.py +44 -0
- build/lib/pyTEMlib/eels_tools/core_loss_tools.py +751 -0
- build/lib/pyTEMlib/eels_tools/eels_database.py +134 -0
- build/lib/pyTEMlib/eels_tools/low_loss_tools.py +655 -0
- build/lib/pyTEMlib/eels_tools/peak_fit_tools.py +175 -0
- build/lib/pyTEMlib/eels_tools/zero_loss_tools.py +264 -0
- build/lib/pyTEMlib/file_reader.py +274 -0
- build/lib/pyTEMlib/file_tools.py +811 -0
- build/lib/pyTEMlib/get_bote_salvat.py +69 -0
- build/lib/pyTEMlib/graph_tools.py +1153 -0
- build/lib/pyTEMlib/graph_viz.py +599 -0
- build/lib/pyTEMlib/image/__init__.py +37 -0
- build/lib/pyTEMlib/image/image_atoms.py +270 -0
- build/lib/pyTEMlib/image/image_clean.py +197 -0
- build/lib/pyTEMlib/image/image_distortion.py +299 -0
- build/lib/pyTEMlib/image/image_fft.py +277 -0
- build/lib/pyTEMlib/image/image_graph.py +926 -0
- build/lib/pyTEMlib/image/image_registration.py +316 -0
- build/lib/pyTEMlib/image/image_utilities.py +309 -0
- build/lib/pyTEMlib/image/image_window.py +421 -0
- build/lib/pyTEMlib/image_tools.py +699 -0
- build/lib/pyTEMlib/interactive_image.py +1 -0
- build/lib/pyTEMlib/kinematic_scattering.py +1196 -0
- build/lib/pyTEMlib/microscope.py +61 -0
- build/lib/pyTEMlib/probe_tools.py +906 -0
- build/lib/pyTEMlib/sidpy_tools.py +153 -0
- build/lib/pyTEMlib/simulation_tools.py +104 -0
- build/lib/pyTEMlib/test.py +437 -0
- build/lib/pyTEMlib/utilities.py +314 -0
- build/lib/pyTEMlib/version.py +5 -0
- build/lib/pyTEMlib/xrpa_x_sections.py +20976 -0
- pyTEMlib/__init__.py +25 -3
- pyTEMlib/animation.py +31 -22
- pyTEMlib/atom_tools.py +29 -34
- pyTEMlib/config_dir.py +2 -28
- pyTEMlib/crystal_tools.py +129 -165
- pyTEMlib/eds_tools.py +559 -342
- pyTEMlib/eds_xsections.py +432 -0
- pyTEMlib/eels_tools/__init__.py +44 -0
- pyTEMlib/eels_tools/core_loss_tools.py +751 -0
- pyTEMlib/eels_tools/eels_database.py +134 -0
- pyTEMlib/eels_tools/low_loss_tools.py +655 -0
- pyTEMlib/eels_tools/peak_fit_tools.py +175 -0
- pyTEMlib/eels_tools/zero_loss_tools.py +264 -0
- pyTEMlib/file_reader.py +274 -0
- pyTEMlib/file_tools.py +260 -1130
- pyTEMlib/get_bote_salvat.py +69 -0
- pyTEMlib/graph_tools.py +101 -174
- pyTEMlib/graph_viz.py +150 -0
- pyTEMlib/image/__init__.py +37 -0
- pyTEMlib/image/image_atoms.py +270 -0
- pyTEMlib/image/image_clean.py +197 -0
- pyTEMlib/image/image_distortion.py +299 -0
- pyTEMlib/image/image_fft.py +277 -0
- pyTEMlib/image/image_graph.py +926 -0
- pyTEMlib/image/image_registration.py +316 -0
- pyTEMlib/image/image_utilities.py +309 -0
- pyTEMlib/image/image_window.py +421 -0
- pyTEMlib/image_tools.py +154 -915
- pyTEMlib/kinematic_scattering.py +1 -1
- pyTEMlib/probe_tools.py +1 -1
- pyTEMlib/test.py +437 -0
- pyTEMlib/utilities.py +314 -0
- pyTEMlib/version.py +2 -3
- pyTEMlib/xrpa_x_sections.py +14 -10
- {pytemlib-0.2025.4.1.dist-info → pytemlib-0.2025.9.1.dist-info}/METADATA +13 -16
- pytemlib-0.2025.9.1.dist-info/RECORD +86 -0
- {pytemlib-0.2025.4.1.dist-info → pytemlib-0.2025.9.1.dist-info}/WHEEL +1 -1
- pytemlib-0.2025.9.1.dist-info/top_level.txt +6 -0
- pyTEMlib/core_loss_widget.py +0 -721
- pyTEMlib/eels_dialog.py +0 -754
- pyTEMlib/eels_dialog_utilities.py +0 -1199
- pyTEMlib/eels_tools.py +0 -2359
- pyTEMlib/file_tools_qt.py +0 -193
- pyTEMlib/image_dialog.py +0 -158
- pyTEMlib/image_dlg.py +0 -146
- pyTEMlib/info_widget.py +0 -1086
- pyTEMlib/info_widget3.py +0 -1120
- pyTEMlib/low_loss_widget.py +0 -479
- pyTEMlib/peak_dialog.py +0 -1129
- pyTEMlib/peak_dlg.py +0 -286
- pytemlib-0.2025.4.1.dist-info/RECORD +0 -38
- pytemlib-0.2025.4.1.dist-info/top_level.txt +0 -1
- {pytemlib-0.2025.4.1.dist-info → pytemlib-0.2025.9.1.dist-info}/entry_points.txt +0 -0
- {pytemlib-0.2025.4.1.dist-info → pytemlib-0.2025.9.1.dist-info}/licenses/LICENSE +0 -0
pyTEMlib/peak_dlg.py
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"""GUI definitions for peak_fit_dialog"""
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# -*- coding: utf-8 -*-
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# Form implementation generated from reading ui file 'untitled.ui'
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#
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# Created by: PyQt5 UI code generator 5.12.3
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#
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# WARNING! All changes made in this file will be lost!
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Qt_available = True
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try:
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from PyQt5 import QtCore, QtGui, QtWidgets
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except:
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Qt_available = False
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# print('Qt dialogs are not available')
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if Qt_available:
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class UiDialog(object):
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"""GUI definitions for peak_fit_dialog"""
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def __init__(self, dialog, mode=None):
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dialog.setObjectName('Fit Peaks')
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dialog.resize(371, 184)
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valid_float = QtGui.QDoubleValidator()
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valid_int = QtGui.QIntValidator()
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valid_int.setBottom(0)
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self.layout = QtWidgets.QGridLayout()
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self.layout.setVerticalSpacing(2)
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self.separator1 = QtWidgets.QLabel(dialog)
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self.separator1.setAutoFillBackground(True)
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palette = self.separator1.palette()
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palette.setColor(self.separator1.backgroundRole(), QtCore.Qt.blue)
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palette.setColor(self.separator1.foregroundRole(), QtCore.Qt.white)
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self.separator1.setAlignment(QtCore.Qt.AlignCenter)
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self.separator1.setMaximumHeight(50)
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self.separator1.setPalette(palette)
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row = 0
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######################################################################
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self.separator1.setText("Fit Region")
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self.layout.addWidget(self.separator1, row, 0, 1, 4)
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######################################################################
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row += 1
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name = 'fit_start'
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self.label1 = QtWidgets.QLabel('Fit Start:')
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self.edit1 = QtWidgets.QLineEdit('0')
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self.edit1.setValidator(valid_float)
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self.unit1 = QtWidgets.QLabel('eV')
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self.edit1.setObjectName(name+'_edit')
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self.unit1.setObjectName(name+'_units')
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self.layout.addWidget(self.label1, row, 0)
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self.layout.addWidget(self.edit1, row, 1)
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self.layout.addWidget(self.unit1, row, 2)
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row += 1
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name = 'fit_end'
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self.label2 = QtWidgets.QLabel('Fit End:')
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self.edit2 = QtWidgets.QLineEdit('0')
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self.edit2.setValidator(valid_float)
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self.unit2 = QtWidgets.QLabel('eV')
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self.edit2.setObjectName(name + '_edit')
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self.unit2.setObjectName(name + '_units')
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self.layout.addWidget(self.label2, row, 0)
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self.layout.addWidget(self.edit2, row, 1)
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self.layout.addWidget(self.unit2, row, 2)
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self.separator2 = QtWidgets.QLabel(dialog)
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self.separator2.setAutoFillBackground(True)
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self.separator2.setAlignment(QtCore.Qt.AlignCenter)
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self.separator2.setMaximumHeight(50)
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self.separator2.setPalette(palette)
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row += 1
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######################################################################
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self.separator2.setText("Processing")
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self.layout.addWidget(self.separator2, row, 0, 1, 4)
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######################################################################
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row += 1
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# self.progress = QtWidgets.QProgressBar()
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# self.progress.setGeometry(0, 0, 300, 25)
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# self.progress.setMaximum(100)
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self.smooth_label = QtWidgets.QLabel('Iterations:')
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self.iteration_list = ['0', '1', '2', '3', '4']
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self.smooth_list = QtWidgets.QComboBox()
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self.smooth_list.setEditable(False)
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self.smooth_list.addItems(self.iteration_list)
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self.smooth_list.setCurrentIndex(1)
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self.smooth_button = QtWidgets.QPushButton('Smooth', dialog)
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self.smooth_button.setCheckable(False)
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self.layout.addWidget(self.smooth_label, row, 0)
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self.layout.addWidget(self.smooth_list, row, 1)
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self.layout.addWidget(self.smooth_button, row, 2)
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row += 1
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self.find_label = QtWidgets.QLabel('Nr. of Peaks:')
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self.find_edit = QtWidgets.QLineEdit('1')
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self.find_edit.setValidator(valid_int)
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self.find_button = QtWidgets.QPushButton('Find Peaks', dialog)
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self.find_button.setCheckable(False)
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self.layout.addWidget(self.find_label, row, 0)
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self.layout.addWidget(self.find_edit, row, 1)
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self.layout.addWidget(self.find_button, row, 2)
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self.separator2 = QtWidgets.QLabel(dialog)
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self.separator2.setAutoFillBackground(True)
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self.separator2.setAlignment(QtCore.Qt.AlignCenter)
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self.separator2.setMaximumHeight(50)
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self.separator2.setPalette(palette)
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row += 1
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######################################################################
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self.separator2.setText("Peaks")
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self.layout.addWidget(self.separator2, row, 0, 1, 4)
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######################################################################
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row += 1
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name = 'peak'
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self.label3 = QtWidgets.QLabel('Peaks:')
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self.peak_list = ['Peak 1', 'Add Peak']
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self.list3 = QtWidgets.QComboBox()
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self.list3.setEditable(False)
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self.list3.addItems(self.peak_list)
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self.unit3 = QtWidgets.QLabel('')
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self.layout.addWidget(self.label3, row, 0)
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self.layout.addWidget(self.list3, row, 1)
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self.layout.addWidget(self.unit3, row, 2)
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self.list3.setObjectName(name + '_list')
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name = 'symmetry'
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self.edge_sym = ['Gauss', 'Lorentzian', 'Drude', 'ZL']
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self.label4 = QtWidgets.QLabel('Symmetry:')
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self.list4.addItems(self.edge_sym)
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self.layout.addWidget(self.label4, row, 0)
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self.layout.addWidget(self.list4, row, 1)
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self.label5 = QtWidgets.QLabel('Position:')
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self.edit5 = QtWidgets.QLineEdit('1')
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self.unit5 = QtWidgets.QLabel('eV')
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self.layout.addWidget(self.label5, row, 0)
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self.layout.addWidget(self.edit5, row, 1)
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self.unit6 = QtWidgets.QLabel('counts')
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self.layout.addWidget(self.edit6, row, 1)
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self.unit7 = QtWidgets.QLabel('eV')
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######################################################################
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######################################################################
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if mode == 'low_loss':
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self.zl_button = QtWidgets.QPushButton('Zero_Loss', dialog)
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230
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self.zl_button.setCheckable(False)
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231
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self.drude_button = QtWidgets.QPushButton('Plasmon', dialog)
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self.drude_button.setCheckable(False)
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233
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234
|
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235
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self.layout.addWidget(self.zl_button, row, 0)
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self.layout.addWidget(self.drude_button, row, 1)
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237
|
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238
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self.model_list = ['None', 'Zero Loss', 'Plasmon', 'Both']
|
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239
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self.list_model = QtWidgets.QComboBox()
|
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240
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self.list_model.setEditable(False)
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241
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self.list_model.addItems(self.model_list)
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243
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244
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self.layout.addWidget(self.list_model, row, 2)
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|
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246
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-
else:
|
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247
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row += 1
|
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248
|
-
self.labelwl = QtWidgets.QLabel('White-Line Ratio:')
|
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249
|
-
self.wl_list = ['Ratio']
|
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250
|
-
self.listwl = QtWidgets.QComboBox()
|
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251
|
-
self.listwl.setEditable(False)
|
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252
|
-
self.listwl.addItems(self.wl_list)
|
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253
|
-
self.unitswl = QtWidgets.QLabel('')
|
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254
|
-
|
|
255
|
-
self.layout.addWidget(self.labelwl, row, 0)
|
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256
|
-
self.layout.addWidget(self.listwl, row, 1)
|
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257
|
-
self.layout.addWidget(self.unitswl, row, 2)
|
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258
|
-
|
|
259
|
-
row += 1
|
|
260
|
-
self.labelwls = QtWidgets.QLabel('White-Line Sum:')
|
|
261
|
-
self.wls_list = ['Sum']
|
|
262
|
-
self.listwls = QtWidgets.QComboBox()
|
|
263
|
-
self.listwls.setEditable(False)
|
|
264
|
-
self.listwls.addItems(self.wls_list)
|
|
265
|
-
self.unitswls = QtWidgets.QLabel('')
|
|
266
|
-
|
|
267
|
-
self.layout.addWidget(self.labelwls, row, 0)
|
|
268
|
-
self.layout.addWidget(self.listwls, row, 1)
|
|
269
|
-
self.layout.addWidget(self.unitswls, row, 2)
|
|
270
|
-
|
|
271
|
-
row += 1
|
|
272
|
-
self.progress = QtWidgets.QProgressBar()
|
|
273
|
-
self.progress.setGeometry(0, 0, 300, 25)
|
|
274
|
-
self.progress.setMaximum(100)
|
|
275
|
-
self.do_all_button = QtWidgets.QPushButton('Do All', dialog)
|
|
276
|
-
|
|
277
|
-
self.layout.addWidget(self.do_all_button, row, 0)
|
|
278
|
-
self.layout.addWidget(self.progress, row, 1)
|
|
279
|
-
|
|
280
|
-
|
|
281
|
-
dialog.setLayout(self.layout)
|
|
282
|
-
dialog.setWindowTitle('Peak Fit Input')
|
|
283
|
-
|
|
284
|
-
# self.buttonBox.accepted.connect(Dialog.accept)
|
|
285
|
-
# self.buttonBox.rejected.connect(Dialog.reject)
|
|
286
|
-
QtCore.QMetaObject.connectSlotsByName(dialog)
|
|
@@ -1,38 +0,0 @@
|
|
|
1
|
-
pyTEMlib/__init__.py,sha256=nEN93amIEoZxO7rJgN71ABeCoXrnmaywBbE97l5lPio,178
|
|
2
|
-
pyTEMlib/animation.py,sha256=G9ykYo6yB5jexjKienShO9C2b8xEXKbf7t47apwcwTw,25188
|
|
3
|
-
pyTEMlib/atom_tools.py,sha256=iXJbK66k3HbTNOGSWRLeUV01JlggUo1Qq89HJqbSv54,7341
|
|
4
|
-
pyTEMlib/config_dir.py,sha256=4evlo9P2Yht-AnqaLI-WweLjDQcislbAP3I7P7EZsPU,2085
|
|
5
|
-
pyTEMlib/core_loss_widget.py,sha256=XQk071ZHMGYOM6RTSIaXQlZtnFQjUyxTWbQ2ZXOFMfU,30901
|
|
6
|
-
pyTEMlib/crystal_tools.py,sha256=g4OXyvd5NLw7vaXhjDP3P6VZpVV6eiyuPn8MdgR2amI,61652
|
|
7
|
-
pyTEMlib/diffraction_plot.py,sha256=pM5d3bdBGa8LlPZ5lw8sLT94mlYTXELxPLv-jUP2FWY,27959
|
|
8
|
-
pyTEMlib/dynamic_scattering.py,sha256=O9MxnxfndWJ2VhQRjksKNQ4yY7y-gN_hitRQ4Qox4ns,9472
|
|
9
|
-
pyTEMlib/eds_tools.py,sha256=Ilof2Cars-1ILXx5g2RsU2G4BgrPwjOHgQ7-OabmbrU,28000
|
|
10
|
-
pyTEMlib/eels_dialog.py,sha256=QG_PU3uuzus_3I3zjfaxb2a9iYq8B053zYw-B52JklM,32595
|
|
11
|
-
pyTEMlib/eels_dialog_utilities.py,sha256=73W9jFbPx-eeLEiSaBptTgGLr40bIYYfSyzLnZbhfvo,51761
|
|
12
|
-
pyTEMlib/eels_tools.py,sha256=pl75ZDQHz1JngxD84T_595Kfrl5TEJSETPGgkXfBtrA,88688
|
|
13
|
-
pyTEMlib/file_tools.py,sha256=RniTJrcuiyt7PefE5SSY_z2pTZPTNhFRjb2oVXVa4nE,66373
|
|
14
|
-
pyTEMlib/file_tools_qt.py,sha256=tLZACS4JyGH_AOzNR_SGAhjA01y4VJB261opPhGMlm8,7223
|
|
15
|
-
pyTEMlib/graph_tools.py,sha256=VWuTgFGeu4gn4cfRgf-76kO6u2B1ZV_dz6gLfx2k4NY,46570
|
|
16
|
-
pyTEMlib/graph_viz.py,sha256=m5PwSn6l2r0bsaLWBDSHc9IGR3_PneG2BrZgnEdi07I,13644
|
|
17
|
-
pyTEMlib/image_dialog.py,sha256=F-ZgKq7UnMtPPd1b9eqb7t8MXDfWN-8hVKwB2Il0x28,6235
|
|
18
|
-
pyTEMlib/image_dlg.py,sha256=n5gradDiYOFGEQ3k_Wlk9RUYYzl4bl_hKLzNVcYteNE,5694
|
|
19
|
-
pyTEMlib/image_tools.py,sha256=iBVsAr6-oQY6y2LTSbUIz6nMeAIOsSX5zPBezekJsFg,52334
|
|
20
|
-
pyTEMlib/info_widget.py,sha256=lkzQOuNVlkaasiZDtc5UtYk541-plYNfnW4DQwQB_iA,53467
|
|
21
|
-
pyTEMlib/info_widget3.py,sha256=QSbdSj6m57KQTir2fNhulVgjOu9EQL31c-9SzTlghnE,55495
|
|
22
|
-
pyTEMlib/interactive_image.py,sha256=5PwypcA1OjLAD-fi8bmWWFHuOjdIPVY9Dh59V24WuDA,34
|
|
23
|
-
pyTEMlib/kinematic_scattering.py,sha256=CUdJnclkok7d8qm_jDUF92MVHrmaTeMkKdvxxB6AqvA,43309
|
|
24
|
-
pyTEMlib/low_loss_widget.py,sha256=0SxHOAuUnuNjDrJSNS2PeWD6hjyuB5FCYxmVfsDTq5c,25573
|
|
25
|
-
pyTEMlib/microscope.py,sha256=iigUF1UImHEfmL2wqEBBj3aNRgEYouDbIln8VCo4_KM,1545
|
|
26
|
-
pyTEMlib/peak_dialog.py,sha256=r3mhYvECC9niFFItS1oGa96F2nFthsE5kfpA3yVXQaE,51872
|
|
27
|
-
pyTEMlib/peak_dlg.py,sha256=qcjcnhwpGa4jBCeXzwQz9sCyX-tHsLLQ67ToqfKOiQY,11550
|
|
28
|
-
pyTEMlib/probe_tools.py,sha256=sDW9CW3SMwjvSHYcEufceismHv_LVkqxcS-gCtEklCg,37926
|
|
29
|
-
pyTEMlib/sidpy_tools.py,sha256=0oIx-qMtEmcZmLazQKW19dd-KoxyY3B15aIeMcyHA8E,4878
|
|
30
|
-
pyTEMlib/simulation_tools.py,sha256=RmegD5TpQMU68uASvzZWVplAqs7bM5KkF6bWDWLjyc0,2799
|
|
31
|
-
pyTEMlib/version.py,sha256=1mG-HaMBzuYiDf1nig-t9gxjgThQprsDbDaDFGoWGBY,94
|
|
32
|
-
pyTEMlib/xrpa_x_sections.py,sha256=m4gaH7gaJiNi-CsIT9aKoH4fB6MQIAe876kxEmzSebI,1825392
|
|
33
|
-
pytemlib-0.2025.4.1.dist-info/licenses/LICENSE,sha256=7HdBF6SXIBd38bHOKkQd4DYR1KV-OYm9mwB16fM-984,1062
|
|
34
|
-
pytemlib-0.2025.4.1.dist-info/METADATA,sha256=Cp3K3rOFMT-MZjC2EK0mKXBYU495_9UFUkZlg2yIH9Y,3515
|
|
35
|
-
pytemlib-0.2025.4.1.dist-info/WHEEL,sha256=Nw36Djuh_5VDukK0H78QzOX-_FQEo6V37m3nkm96gtU,91
|
|
36
|
-
pytemlib-0.2025.4.1.dist-info/entry_points.txt,sha256=zn2yO1IWTutI3c7C9e3GdARCvm43JURoOhqQ8YylV4Y,43
|
|
37
|
-
pytemlib-0.2025.4.1.dist-info/top_level.txt,sha256=rPLVH0UJxrPSPgSoKScTjL1K_X69JFzsYYnDnYTYIlU,9
|
|
38
|
-
pytemlib-0.2025.4.1.dist-info/RECORD,,
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
pyTEMlib
|
|
File without changes
|
|
File without changes
|