pyTEMlib 0.2025.12.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- build/lib/pyTEMlib/__init__.py +36 -0
- build/lib/pyTEMlib/animation.py +667 -0
- build/lib/pyTEMlib/atom_tools.py +229 -0
- build/lib/pyTEMlib/config_dir.py +43 -0
- build/lib/pyTEMlib/crystal_tools.py +1219 -0
- build/lib/pyTEMlib/diffraction_plot.py +757 -0
- build/lib/pyTEMlib/dynamic_scattering.py +298 -0
- build/lib/pyTEMlib/eds_tools.py +901 -0
- build/lib/pyTEMlib/eds_xsections.py +268 -0
- build/lib/pyTEMlib/eels_tools/__init__.py +44 -0
- build/lib/pyTEMlib/eels_tools/core_loss_tools.py +751 -0
- build/lib/pyTEMlib/eels_tools/eels_database.py +134 -0
- build/lib/pyTEMlib/eels_tools/low_loss_tools.py +655 -0
- build/lib/pyTEMlib/eels_tools/peak_fit_tools.py +175 -0
- build/lib/pyTEMlib/eels_tools/zero_loss_tools.py +264 -0
- build/lib/pyTEMlib/file_reader.py +275 -0
- build/lib/pyTEMlib/file_tools.py +816 -0
- build/lib/pyTEMlib/get_bote_salvat.py +69 -0
- build/lib/pyTEMlib/graph_tools.py +1153 -0
- build/lib/pyTEMlib/graph_viz.py +599 -0
- build/lib/pyTEMlib/image/__init__.py +37 -0
- build/lib/pyTEMlib/image/image_atoms.py +270 -0
- build/lib/pyTEMlib/image/image_clean.py +198 -0
- build/lib/pyTEMlib/image/image_distortion.py +299 -0
- build/lib/pyTEMlib/image/image_fft.py +278 -0
- build/lib/pyTEMlib/image/image_graph.py +926 -0
- build/lib/pyTEMlib/image/image_registration.py +316 -0
- build/lib/pyTEMlib/image/image_utilities.py +308 -0
- build/lib/pyTEMlib/image/image_window.py +421 -0
- build/lib/pyTEMlib/image_tools.py +701 -0
- build/lib/pyTEMlib/interactive_image.py +1 -0
- build/lib/pyTEMlib/kinematic_scattering.py +1145 -0
- build/lib/pyTEMlib/microscope.py +62 -0
- build/lib/pyTEMlib/probe_tools.py +928 -0
- build/lib/pyTEMlib/sidpy_tools.py +153 -0
- build/lib/pyTEMlib/simulation_tools.py +104 -0
- build/lib/pyTEMlib/test.py +437 -0
- build/lib/pyTEMlib/utilities.py +431 -0
- build/lib/pyTEMlib/version.py +5 -0
- build/lib/pyTEMlib/xrpa_x_sections.py +20976 -0
- pyTEMlib/__init__.py +36 -0
- pyTEMlib/animation.py +667 -0
- pyTEMlib/atom_tools.py +229 -0
- pyTEMlib/config_dir.py +43 -0
- pyTEMlib/crystal_tools.py +1219 -0
- pyTEMlib/data/k_factors_Bruker_15keV.json +293 -0
- pyTEMlib/data/k_factors_Thermo_200keV.json +494 -0
- pyTEMlib/data/xrays_X_section_100kV.json +19334 -0
- pyTEMlib/data/xrays_X_section_200kV.json +18711 -0
- pyTEMlib/data/xrays_X_section_300kV.json +18347 -0
- pyTEMlib/data/xrays_X_section_60kV.json +20202 -0
- pyTEMlib/diffraction_plot.py +757 -0
- pyTEMlib/dynamic_scattering.py +298 -0
- pyTEMlib/eds_tools.py +901 -0
- pyTEMlib/eds_xsections.py +268 -0
- pyTEMlib/eels_tools/__init__.py +44 -0
- pyTEMlib/eels_tools/core_loss_tools.py +751 -0
- pyTEMlib/eels_tools/eels_database.py +134 -0
- pyTEMlib/eels_tools/low_loss_tools.py +655 -0
- pyTEMlib/eels_tools/peak_fit_tools.py +175 -0
- pyTEMlib/eels_tools/zero_loss_tools.py +264 -0
- pyTEMlib/file_reader.py +275 -0
- pyTEMlib/file_tools.py +816 -0
- pyTEMlib/get_bote_salvat.py +69 -0
- pyTEMlib/graph_tools.py +1153 -0
- pyTEMlib/graph_viz.py +599 -0
- pyTEMlib/image/__init__.py +37 -0
- pyTEMlib/image/image_atoms.py +270 -0
- pyTEMlib/image/image_clean.py +198 -0
- pyTEMlib/image/image_distortion.py +299 -0
- pyTEMlib/image/image_fft.py +278 -0
- pyTEMlib/image/image_graph.py +926 -0
- pyTEMlib/image/image_registration.py +316 -0
- pyTEMlib/image/image_utilities.py +308 -0
- pyTEMlib/image/image_window.py +421 -0
- pyTEMlib/image_tools.py +701 -0
- pyTEMlib/interactive_image.py +1 -0
- pyTEMlib/kinematic_scattering.py +1145 -0
- pyTEMlib/microscope.py +62 -0
- pyTEMlib/probe_tools.py +928 -0
- pyTEMlib/sidpy_tools.py +153 -0
- pyTEMlib/simulation_tools.py +104 -0
- pyTEMlib/test.py +437 -0
- pyTEMlib/utilities.py +431 -0
- pyTEMlib/version.py +5 -0
- pyTEMlib/xrpa_x_sections.py +20976 -0
- pytemlib-0.2025.12.0.dist-info/METADATA +100 -0
- pytemlib-0.2025.12.0.dist-info/RECORD +92 -0
- pytemlib-0.2025.12.0.dist-info/WHEEL +5 -0
- pytemlib-0.2025.12.0.dist-info/entry_points.txt +2 -0
- pytemlib-0.2025.12.0.dist-info/licenses/LICENSE +21 -0
- pytemlib-0.2025.12.0.dist-info/top_level.txt +5 -0
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""" default microscope parameters from config file
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Read microscope CSV file
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for pyTEMLib by Gerd
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copyright 2012, Gerd Duscher
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updated 2021
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"""
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# -*- coding: utf-8 -*-
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import csv
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import os.path
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from pyTEMlib.config_dir import config_path
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microscopes_file = os.path.join(config_path, 'microscopes.csv')
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class Microscope():
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"""Class to read configuration file and provide microscope information"""
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microscopes = {}
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name = None
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E0 = None
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alpha = None
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beta = None
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pppc = None
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correlation_factor = None
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def __init__(self):
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self.load_microscopes()
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default_tem = self.microscopes[list(self.microscopes.keys())[0]]
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self.set_microscope(default_tem['Microscope'])
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def load_microscopes(self):
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"""Load microscope parameters from CSV file."""
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with open(microscopes_file, 'r', encoding='utf-8') as f:
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labels = f.readline().strip().split(',')
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# print labels
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csv_read = csv.DictReader(f, labels, delimiter=",")
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for line in csv_read:
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tem = line['Microscope']
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self.microscopes[tem] = line
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for i in self.microscopes[tem]:
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if i != 'Microscope':
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self.microscopes[tem][i] = float(self.microscopes[tem][i])
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def get_available_microscope_names(self):
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"""Return list of available microscope names."""
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tem = []
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for scope in self.microscopes:
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tem.append(scope)
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return tem
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def set_microscope(self, microscope_name):
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"""Set current microscope by name."""
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if microscope_name in self.microscopes:
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self.name = microscope_name
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microscope = Microscope()
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