pyTEMlib 0.2023.8.0__py2.py3-none-any.whl → 0.2024.2.0__py2.py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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- pyTEMlib/config_dir.py +0 -1
- pyTEMlib/crystal_tools.py +22 -26
- pyTEMlib/eds_tools.py +499 -46
- pyTEMlib/eels_dialog.py +284 -899
- pyTEMlib/eels_dialog_utilities.py +218 -341
- pyTEMlib/eels_tools.py +1526 -1583
- pyTEMlib/file_tools.py +52 -48
- pyTEMlib/graph_tools.py +3 -4
- pyTEMlib/image_tools.py +171 -41
- pyTEMlib/info_widget.py +618 -276
- pyTEMlib/kinematic_scattering.py +77 -512
- pyTEMlib/peak_dialog.py +162 -288
- pyTEMlib/version.py +2 -2
- pyTEMlib/xrpa_x_sections.py +173 -97
- {pyTEMlib-0.2023.8.0.dist-info → pyTEMlib-0.2024.2.0.dist-info}/LICENSE +1 -1
- {pyTEMlib-0.2023.8.0.dist-info → pyTEMlib-0.2024.2.0.dist-info}/METADATA +2 -2
- pyTEMlib-0.2024.2.0.dist-info/RECORD +35 -0
- {pyTEMlib-0.2023.8.0.dist-info → pyTEMlib-0.2024.2.0.dist-info}/WHEEL +1 -1
- pyTEMlib/eels_dlg.py +0 -252
- pyTEMlib/info_dialog.py +0 -665
- pyTEMlib/info_dlg.py +0 -239
- pyTEMlib/interactive_eels.py +0 -35
- pyTEMlib/viz.py +0 -481
- pyTEMlib-0.2023.8.0.dist-info/RECORD +0 -40
- {pyTEMlib-0.2023.8.0.dist-info → pyTEMlib-0.2024.2.0.dist-info}/entry_points.txt +0 -0
- {pyTEMlib-0.2023.8.0.dist-info → pyTEMlib-0.2024.2.0.dist-info}/top_level.txt +0 -0
pyTEMlib/info_dlg.py
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"""
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Gui for info_dialog
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Author: Gerd Duscher
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"""
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# -*- coding: utf-8 -*-
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# Form implementation generated from reading ui file 'untitled.ui'
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#
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# Created by: PyQt5 UI code generator 5.12.3
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#
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# WARNING! All changes made in this file will be lost!
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from pyTEMlib.microscope import microscope
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Qt_available = True
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try:
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from PyQt5 import QtCore, QtGui, QtWidgets
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except:
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Qt_available = False
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# print('Qt dialogs are not available')
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if Qt_available:
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class UiDialog(object):
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def __init__(self, dialog):
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dialog.setObjectName('Spectrum Info')
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dialog.resize(371, 184)
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valid_float = QtGui.QDoubleValidator()
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valid_int = QtGui.QIntValidator()
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self.TEM = []
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self.TEM = microscope.get_available_microscope_names()
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self.layout = QtWidgets.QGridLayout()
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self.layout.setVerticalSpacing(2)
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self.separator1 = QtWidgets.QLabel(dialog)
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self.separator1.setAutoFillBackground(True)
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palette = self.separator1.palette()
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palette.setColor(self.separator1.backgroundRole(), QtCore.Qt.blue)
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palette.setColor(self.separator1.foregroundRole(), QtCore.Qt.white)
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self.separator1.setAlignment(QtCore.Qt.AlignCenter)
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self.separator1.setMaximumHeight(50)
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self.separator1.setPalette(palette)
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######################################################################
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self.separator1.setText("Energy Scale")
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row = 0
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self.layout.addWidget(self.separator1, row, 0, 1, 4)
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######################################################################
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row += 1
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self.offsetLabel = QtWidgets.QLabel("Offset")
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self.offsetEdit = QtWidgets.QLineEdit(" 1.00")
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self.offsetEdit.setValidator(valid_float)
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self.offsetUnit = QtWidgets.QLabel("eV")
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self.layout.addWidget(self.offsetLabel, row, 0)
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self.layout.addWidget(self.offsetEdit, row, 1)
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self.layout.addWidget(self.offsetUnit, row, 2)
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row += 1
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self.dispersionLabel = QtWidgets.QLabel("Dispersion")
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self.dispersionEdit = QtWidgets.QLineEdit(" 1.00")
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self.dispersionEdit.setValidator(valid_float)
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self.dispersionUnit = QtWidgets.QLabel("eV/channel")
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self.layout.addWidget(self.dispersionLabel, row, 0)
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self.layout.addWidget(self.dispersionEdit, row, 1)
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self.layout.addWidget(self.dispersionUnit, row, 2)
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row += 1
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self.energy_button = QtWidgets.QPushButton('Set Energy Scale', dialog)
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self.energy_button.setCheckable(True)
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self.layout.addWidget(self.energy_button, row, 1)
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row += 1
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self.timeLabel = QtWidgets.QLabel("Exp. Time")
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self.timeEdit = QtWidgets.QLineEdit(" 100.0")
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self.timeEdit.setValidator(valid_float)
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self.timeUnit = QtWidgets.QLabel("s")
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self.layout.addWidget(self.timeLabel, row, 0)
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self.layout.addWidget(self.timeEdit, row, 1)
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self.layout.addWidget(self.timeUnit, row, 2)
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self.separator2 = QtWidgets.QLabel(dialog)
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self.separator2.setAutoFillBackground(True)
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self.separator2.setAlignment(QtCore.Qt.AlignCenter)
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self.separator2.setMaximumHeight(50)
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self.separator2.setPalette(palette)
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row += 1
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######################################################################
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self.separator2.setText("Microscope")
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self.layout.addWidget(self.separator2, row, 0, 1, 4)
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######################################################################
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row += 1
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self.TEMList = QtWidgets.QComboBox()
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self.TEMList.setEditable(False)
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self.TEMList.addItems(self.TEM)
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self.layout.addWidget(self.TEMList, row, 1)
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row += 1
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self.convLabel = QtWidgets.QLabel("Conv. Angle")
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self.convEdit = QtWidgets.QLineEdit(" 100.0")
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self.convEdit.setValidator(valid_float)
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self.convUnit = QtWidgets.QLabel("mrad")
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self.layout.addWidget(self.convLabel, row, 0)
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self.layout.addWidget(self.convEdit, row, 1)
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self.layout.addWidget(self.convUnit, row, 2)
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row += 1
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self.collLabel = QtWidgets.QLabel("Coll. Angle")
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self.collEdit = QtWidgets.QLineEdit(" 10.0")
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self.collEdit.setValidator(valid_float)
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self.collUnit = QtWidgets.QLabel("mrad")
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self.layout.addWidget(self.collLabel, row, 0)
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self.layout.addWidget(self.collEdit, row, 1)
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self.layout.addWidget(self.collUnit, row, 2)
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row += 1
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self.E0Label = QtWidgets.QLabel("Acc. Voltage")
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self.E0Edit = QtWidgets.QLineEdit(" 100.0")
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self.E0Edit.setValidator(valid_float)
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self.E0Unit = QtWidgets.QLabel("kV")
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self.layout.addWidget(self.E0Label, row, 0)
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self.layout.addWidget(self.E0Edit, row, 1)
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self.layout.addWidget(self.E0Unit, row, 2)
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self.separator3 = QtWidgets.QLabel(dialog)
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self.separator3.setAutoFillBackground(True)
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self.separator3.setAlignment(QtCore.Qt.AlignCenter)
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self.separator3.setMaximumHeight(50)
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self.separator3.setPalette(palette)
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row += 1
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######################################################################
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self.separator3.setText("Quantification")
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self.layout.addWidget(self.separator3, row, 0, 1, 4)
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######################################################################
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row += 1
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self.binningLabel = QtWidgets.QLabel("Binning")
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self.binningEdit = QtWidgets.QLineEdit(" 1")
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self.binningEdit.setValidator(valid_int)
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self.layout.addWidget(self.binningLabel, row, 0)
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self.layout.addWidget(self.binningEdit, row, 1)
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row += 1
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self.check_probability = QtWidgets.QCheckBox("Probab.")
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self.check_probability.setObjectName('probability')
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self.probabilityLabel = QtWidgets.QLabel("Flux")
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self.get_flux_button = QtWidgets.QPushButton('', )
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self.flux_choice = ['None', 'Open File']
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self.select_flux = QtWidgets.QComboBox()
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self.select_flux.setEditable(False)
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self.select_flux.addItems(self.flux_choice)
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self.layout.addWidget(self.probabilityLabel, row, 0)
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self.layout.addWidget(self.select_flux, row, 1)
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self.layout.addWidget(self.check_probability, row, 2)
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self.select_flux.setObjectName('select_flux_list')
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self.conversionLabel = QtWidgets.QLabel("Conversion")
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self.conversionEdit = QtWidgets.QLineEdit(" 25.0")
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self.conversionEdit.setValidator(valid_float)
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self.conversionUnit = QtWidgets.QLabel("e<sup>-</sup>/counts")
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self.layout.addWidget(self.conversionLabel, row, 0)
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self.layout.addWidget(self.conversionEdit, row, 1)
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self.layout.addWidget(self.conversionUnit, row, 2)
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self.fluxLabel = QtWidgets.QLabel("Flux")
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self.fluxEdit = QtWidgets.QLineEdit(" 100.0")
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self.fluxEdit.setValidator(valid_float)
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self.fluxUnit = QtWidgets.QLabel("e<sup>-</sup>/s")
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self.layout.addWidget(self.fluxLabel, row, 0)
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self.layout.addWidget(self.fluxEdit, row, 1)
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self.layout.addWidget(self.fluxUnit, row, 2)
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self.VOALabel = QtWidgets.QLabel("Measurement")
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self.VOAEdit = QtWidgets.QLineEdit(" 10.0")
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self.VOAEdit.setValidator(valid_float)
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self.VOAUnit = QtWidgets.QLabel("pA")
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self.layout.addWidget(self.VOALabel, row, 0)
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self.layout.addWidget(self.VOAEdit, row, 1)
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self.layout.addWidget(self.VOAUnit, row, 2)
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self.separator4 = QtWidgets.QLabel(dialog)
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self.separator4.setPalette(palette)
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######################################################################
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self.separator4.setText("Spectrum Image")
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self.layout.addWidget(self.separator4, row, 0, 1, 4)
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self.binXLabel = QtWidgets.QLabel('Bin X:')
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self.layout.addWidget(self.binXLabel, row, 0)
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self.layout.addWidget(self.binXEdit, row, 1)
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self.layout.addWidget(self.binXUnit, row, 2)
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self.layout.addWidget(self.binYLabel, row, 0)
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self.layout.addWidget(self.binYEdit, row, 1)
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self.layout.addWidget(self.binYUnit, row, 2)
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self.statusBar = QtWidgets.QStatusBar()
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self.layout.addWidget(self.statusBar, row+1, 0, 1, 4)
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dialog.setLayout(self.layout)
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dialog.setWindowTitle("Spectrum Info")
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QtCore.QMetaObject.connectSlotsByName(dialog)
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pyTEMlib/interactive_eels.py
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""" Interactive routines for EELS analysis
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this file provides additional dialogs for EELS quantification
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Author: Gerd Duscher
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"""
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Qt_available = True
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Qt_available = False
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print('Qt dialogs are not available')
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from pyTEMlib import eels_dialog
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from pyTEMlib import info_dialog
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from pyTEMlib import peak_dialog
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if Qt_available:
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from pyTEMlib.eels_dialog_utilities import *
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CompositionDialog = eels_dialog.EELSDialog
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CurveVisualizer = eels_dialog.CurveVisualizer
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InfoDialog = info_dialog.InfoDialog
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PeakFitDialog = peak_dialog.PeakFitDialog
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CompositionDialog = eels_dialog.CompositionWidget
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InfoDialog = info_dialog.InfoWidget
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PeakFitDialog = peak_dialog.PeakFitWidget
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InfoWidget = info_dialog.InfoWidget
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CompositionWidget = eels_dialog.CompositionWidget
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PeakFitWidget = peak_dialog.PeakFitWidget
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