py2ls 0.1.10.12__py3-none-any.whl → 0.2.7.10__py3-none-any.whl
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- py2ls/.DS_Store +0 -0
- py2ls/.git/.DS_Store +0 -0
- py2ls/.git/index +0 -0
- py2ls/.git/logs/refs/remotes/origin/HEAD +1 -0
- py2ls/.git/objects/.DS_Store +0 -0
- py2ls/.git/refs/.DS_Store +0 -0
- py2ls/ImageLoader.py +621 -0
- py2ls/__init__.py +7 -5
- py2ls/apptainer2ls.py +3940 -0
- py2ls/batman.py +164 -42
- py2ls/bio.py +2595 -0
- py2ls/cell_image_clf.py +1632 -0
- py2ls/container2ls.py +4635 -0
- py2ls/corr.py +475 -0
- py2ls/data/.DS_Store +0 -0
- py2ls/data/email/email_html_template.html +88 -0
- py2ls/data/hyper_param_autogluon_zeroshot2024.json +2383 -0
- py2ls/data/hyper_param_tabrepo_2024.py +1753 -0
- py2ls/data/mygenes_fields_241022.txt +355 -0
- py2ls/data/re_common_pattern.json +173 -0
- py2ls/data/sns_info.json +74 -0
- py2ls/data/styles/.DS_Store +0 -0
- py2ls/data/styles/example/.DS_Store +0 -0
- py2ls/data/styles/stylelib/.DS_Store +0 -0
- py2ls/data/styles/stylelib/grid.mplstyle +15 -0
- py2ls/data/styles/stylelib/high-contrast.mplstyle +6 -0
- py2ls/data/styles/stylelib/high-vis.mplstyle +4 -0
- py2ls/data/styles/stylelib/ieee.mplstyle +15 -0
- py2ls/data/styles/stylelib/light.mplstyl +6 -0
- py2ls/data/styles/stylelib/muted.mplstyle +6 -0
- py2ls/data/styles/stylelib/nature-reviews-latex.mplstyle +616 -0
- py2ls/data/styles/stylelib/nature-reviews.mplstyle +616 -0
- py2ls/data/styles/stylelib/nature.mplstyle +31 -0
- py2ls/data/styles/stylelib/no-latex.mplstyle +10 -0
- py2ls/data/styles/stylelib/notebook.mplstyle +36 -0
- py2ls/data/styles/stylelib/paper.mplstyle +290 -0
- py2ls/data/styles/stylelib/paper2.mplstyle +305 -0
- py2ls/data/styles/stylelib/retro.mplstyle +4 -0
- py2ls/data/styles/stylelib/sans.mplstyle +10 -0
- py2ls/data/styles/stylelib/scatter.mplstyle +7 -0
- py2ls/data/styles/stylelib/science.mplstyle +48 -0
- py2ls/data/styles/stylelib/std-colors.mplstyle +4 -0
- py2ls/data/styles/stylelib/vibrant.mplstyle +6 -0
- py2ls/data/tiles.csv +146 -0
- py2ls/data/usages_pd.json +1417 -0
- py2ls/data/usages_sns.json +31 -0
- py2ls/docker2ls.py +5446 -0
- py2ls/ec2ls.py +61 -0
- py2ls/fetch_update.py +145 -0
- py2ls/ich2ls.py +1955 -296
- py2ls/im2.py +8242 -0
- py2ls/image_ml2ls.py +2100 -0
- py2ls/ips.py +33909 -3418
- py2ls/ml2ls.py +7700 -0
- py2ls/mol.py +289 -0
- py2ls/mount2ls.py +1307 -0
- py2ls/netfinder.py +873 -351
- py2ls/nl2ls.py +283 -0
- py2ls/ocr.py +1581 -458
- py2ls/plot.py +10394 -314
- py2ls/rna2ls.py +311 -0
- py2ls/ssh2ls.md +456 -0
- py2ls/ssh2ls.py +5933 -0
- py2ls/ssh2ls_v01.py +2204 -0
- py2ls/stats.py +66 -172
- py2ls/temp20251124.py +509 -0
- py2ls/translator.py +2 -0
- py2ls/utils/decorators.py +3564 -0
- py2ls/utils_bio.py +3453 -0
- {py2ls-0.1.10.12.dist-info → py2ls-0.2.7.10.dist-info}/METADATA +113 -224
- {py2ls-0.1.10.12.dist-info → py2ls-0.2.7.10.dist-info}/RECORD +72 -16
- {py2ls-0.1.10.12.dist-info → py2ls-0.2.7.10.dist-info}/WHEEL +0 -0
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svg.image_inline: true
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text.antialiased: true
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text.color: k
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text.hinting: force_autohint
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text.hinting_factor: 8
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text.kerning_factor: 0
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text.latex.preamble:
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text.parse_math: true
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text.usetex: false
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timezone: UTC
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tk.window_focus: false
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toolbar: toolbar2
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webagg.address: 127.0.0.1
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webagg.open_in_browser: true
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webagg.port: 8988
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webagg.port_retries: 50
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xaxis.labellocation: center
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xtick.alignment: center
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xtick.bottom: true
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xtick.color: k
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xtick.direction: out
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xtick.labelbottom: true
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xtick.labelcolor: inherit
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xtick.labelsize: 11.0
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xtick.labeltop: false
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xtick.major.bottom: true
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xtick.major.pad: 3.5
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xtick.major.size: 2.0
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xtick.major.top: true
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xtick.major.width: 0.8
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xtick.minor.bottom: true
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xtick.minor.ndivs: auto
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xtick.minor.pad: 3.4
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xtick.minor.size: 2.0
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xtick.minor.top: true
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xtick.minor.visible: false
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xtick.minor.width: 0.6
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xtick.top: false
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yaxis.labellocation: center
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ytick.alignment: center_baseline
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ytick.color: k
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ytick.direction: out
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ytick.labelcolor: inherit
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ytick.labelleft: true
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ytick.labelright: false
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ytick.labelsize: 11.0
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ytick.left: true
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ytick.major.left: true
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ytick.major.pad: 3.5
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ytick.major.right: true
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ytick.major.size: 3.5
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ytick.major.width: 0.8
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ytick.minor.left: true
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ytick.minor.ndivs: auto
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ytick.minor.pad: 3.4
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ytick.minor.right: true
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ytick.minor.size: 0.0
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ytick.minor.visible: false
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ytick.minor.width: 0.6
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ytick.right: false
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|
@@ -0,0 +1,10 @@
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1
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+
# Sans-serif
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2
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+
font.family : sans-serif
|
|
3
|
+
|
|
4
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+
# Latex with sans-serif fonts
|
|
5
|
+
mathtext.fontset : dejavusans
|
|
6
|
+
|
|
7
|
+
# In general, we need to be careful with the preamble. A common font for
|
|
8
|
+
# sans serif LaTeX is cmbright. However, it does not support bold fontweights
|
|
9
|
+
# so we use sfmath instead.
|
|
10
|
+
text.latex.preamble : \usepackage{amsmath} \usepackage{amssymb} \usepackage{sfmath}
|
|
@@ -0,0 +1,7 @@
|
|
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1
|
+
# Matplotlib style for scatter plots
|
|
2
|
+
|
|
3
|
+
# Set markers (style, color, no lines)
|
|
4
|
+
axes.prop_cycle : (cycler('marker', ['o', 's', '^', 'v', '<', '>', 'd']) + cycler('color', ['0C5DA5', '00B945', 'FF9500', 'FF2C00', '845B97', '474747', '9e9e9e']) + cycler('ls', [' ', ' ', ' ', ' ', ' ', ' ', ' ']))
|
|
5
|
+
|
|
6
|
+
# Set marker size
|
|
7
|
+
lines.markersize : 3
|
|
@@ -0,0 +1,48 @@
|
|
|
1
|
+
# Matplotlib style for scientific plotting
|
|
2
|
+
# This is the base style for "SciencePlots"
|
|
3
|
+
# see: https://github.com/garrettj403/SciencePlots
|
|
4
|
+
|
|
5
|
+
# Set color cycle: blue, green, yellow, red, violet, gray
|
|
6
|
+
axes.prop_cycle : cycler('color', ['0C5DA5', '00B945', 'FF9500', 'FF2C00', '845B97', '474747', '9e9e9e'])
|
|
7
|
+
|
|
8
|
+
# Set default figure size
|
|
9
|
+
figure.figsize : 3.5, 2.625
|
|
10
|
+
|
|
11
|
+
# Set x axis
|
|
12
|
+
xtick.direction : in
|
|
13
|
+
xtick.major.size : 3
|
|
14
|
+
xtick.major.width : 0.5
|
|
15
|
+
xtick.minor.size : 1.5
|
|
16
|
+
xtick.minor.width : 0.5
|
|
17
|
+
xtick.minor.visible : True
|
|
18
|
+
xtick.top : True
|
|
19
|
+
|
|
20
|
+
# Set y axis
|
|
21
|
+
ytick.direction : in
|
|
22
|
+
ytick.major.size : 3
|
|
23
|
+
ytick.major.width : 0.5
|
|
24
|
+
ytick.minor.size : 1.5
|
|
25
|
+
ytick.minor.width : 0.5
|
|
26
|
+
ytick.minor.visible : True
|
|
27
|
+
ytick.right : True
|
|
28
|
+
|
|
29
|
+
# Set line widths
|
|
30
|
+
axes.linewidth : 0.5
|
|
31
|
+
grid.linewidth : 0.5
|
|
32
|
+
lines.linewidth : 1.
|
|
33
|
+
|
|
34
|
+
# Remove legend frame
|
|
35
|
+
legend.frameon : False
|
|
36
|
+
|
|
37
|
+
# Always save as 'tight'
|
|
38
|
+
savefig.bbox : tight
|
|
39
|
+
savefig.pad_inches : 0.05
|
|
40
|
+
|
|
41
|
+
# Use serif fonts
|
|
42
|
+
# font.serif : Times
|
|
43
|
+
font.family : serif
|
|
44
|
+
mathtext.fontset : dejavuserif
|
|
45
|
+
|
|
46
|
+
# Use LaTeX for math formatting
|
|
47
|
+
text.usetex : True
|
|
48
|
+
text.latex.preamble : \usepackage{amsmath} \usepackage{amssymb}
|