niwrap-freesurfer 0.6.3__py3-none-any.whl → 0.7.0__py3-none-any.whl

niwrap_freesurfer/freesurfer/__init__.py

@@ -12,6 +12,8 @@ subcortical segmentation, cortical surface reconstruction, statistical analysis
 of group morphometry, diffusion MRI, PET analysis, and much more. It is also the
 structural MRI analysis software of choice for the Human Connectome Project.
 
+Author: FreeSurfer Developers
+
 URL: https://github.com/freesurfer/freesurfer
 """
 # This file was auto generated by Styx.
@@ -713,3 +715,715 @@ from .xhemi_tal import *
 from .xhemireg import *
 from .xsanatreg import *
 from .zero_lt_4dfp import *
+from styxdefs import Runner as _Runner
+
+
+def execute(
+    params: dict,
+    runner: _Runner | None = None,
+) -> None:
+    """
+    Run a command in this package dynamically from a params object.
+    
+    Args:
+        params: The parameters.
+        runner: Command runner.
+    """
+    return {
+        "freesurfer/3dvolreg.afni": v_3dvolreg_afni_execute,
+        "freesurfer/4dfptoanalyze": v_4dfptoanalyze_execute,
+        "freesurfer/AntsDenoiseImageFs": ants_denoise_image_fs_execute,
+        "freesurfer/AntsN4BiasFieldCorrectionFs": ants_n4_bias_field_correction_fs_execute,
+        "freesurfer/IsLTA": is_lta_execute,
+        "freesurfer/SegmentSubfieldsT1Longitudinal": segment_subfields_t1_longitudinal_execute,
+        "freesurfer/SegmentThalamicNuclei": segment_thalamic_nuclei_execute,
+        "freesurfer/Spline3_test": spline3_test_execute,
+        "freesurfer/UpdateNeeded": update_needed_execute,
+        "freesurfer/analyzeto4dfp": analyzeto4dfp_execute,
+        "freesurfer/anatomiCutsUtils": anatomi_cuts_utils_execute,
+        "freesurfer/annot2std": annot2std_execute,
+        "freesurfer/aparc2feat": aparc2feat_execute,
+        "freesurfer/aparc_stats_aseg": aparc_stats_aseg_execute,
+        "freesurfer/aparcstats2table": aparcstats2table_execute,
+        "freesurfer/aparcstatsdiff": aparcstatsdiff_execute,
+        "freesurfer/apas2aseg": apas2aseg_execute,
+        "freesurfer/applyMorph": apply_morph_execute,
+        "freesurfer/aseg2feat": aseg2feat_execute,
+        "freesurfer/asegstats2table": asegstats2table_execute,
+        "freesurfer/asegstatsdiff": asegstatsdiff_execute,
+        "freesurfer/avi2talxfm": avi2talxfm_execute,
+        "freesurfer/bblabel": bblabel_execute,
+        "freesurfer/bbmask": bbmask_execute,
+        "freesurfer/bbregister": bbregister_execute,
+        "freesurfer/bedpostx_mgh": bedpostx_mgh_execute,
+        "freesurfer/beta2sxa": beta2sxa_execute,
+        "freesurfer/biasfield": biasfield_execute,
+        "freesurfer/bmedits2surf": bmedits2surf_execute,
+        "freesurfer/brec": brec_execute,
+        "freesurfer/browse-minc-header.tcl": browse_minc_header_tcl_execute,
+        "freesurfer/bugr": bugr_execute,
+        "freesurfer/build_desikan_killiany_gcs.csh": build_desikan_killiany_gcs_csh_execute,
+        "freesurfer/cblumwmgyri": cblumwmgyri_execute,
+        "freesurfer/checkMCR.sh": check_mcr_sh_execute,
+        "freesurfer/check_recons.sh": check_recons_sh_execute,
+        "freesurfer/check_subject": check_subject_execute,
+        "freesurfer/compute_interrater_variability.csh": compute_interrater_variability_csh_execute,
+        "freesurfer/compute_label_volumes.csh": compute_label_volumes_csh_execute,
+        "freesurfer/compute_vox2vox": compute_vox2vox_execute,
+        "freesurfer/conf2hires": conf2hires_execute,
+        "freesurfer/connected_components": connected_components_execute,
+        "freesurfer/cor_to_minc": cor_to_minc_execute,
+        "freesurfer/cp-dicom": cp_dicom_execute,
+        "freesurfer/createMorph": create_morph_execute,
+        "freesurfer/csvprint": csvprint_execute,
+        "freesurfer/dcmdir-info-mgh": dcmdir_info_mgh_execute,
+        "freesurfer/dcmdjpeg.fs": dcmdjpeg_fs_execute,
+        "freesurfer/dcmdrle.fs": dcmdrle_fs_execute,
+        "freesurfer/dcmsplit": dcmsplit_execute,
+        "freesurfer/dcmunpack": dcmunpack_execute,
+        "freesurfer/deface_subject": deface_subject_execute,
+        "freesurfer/defect-seg": defect_seg_execute,
+        "freesurfer/defect2seg": defect2seg_execute,
+        "freesurfer/dicom-rename": dicom_rename_execute,
+        "freesurfer/diffusionUtils": diffusion_utils_execute,
+        "freesurfer/dmri_AnatomiCuts": dmri_anatomi_cuts_execute,
+        "freesurfer/dmri_ac.sh": dmri_ac_sh_execute,
+        "freesurfer/dmri_bset": dmri_bset_execute,
+        "freesurfer/dmri_coloredFA": dmri_colored_fa_execute,
+        "freesurfer/dmri_extractSurfaceMeasurements": dmri_extract_surface_measurements_execute,
+        "freesurfer/dmri_forrest": dmri_forrest_execute,
+        "freesurfer/dmri_group": dmri_group_execute,
+        "freesurfer/dmri_groupByEndpoints": dmri_group_by_endpoints_execute,
+        "freesurfer/dmri_match": dmri_match_execute,
+        "freesurfer/dmri_mergepaths": dmri_mergepaths_execute,
+        "freesurfer/dmri_motion": dmri_motion_execute,
+        "freesurfer/dmri_neighboringRegions": dmri_neighboring_regions_execute,
+        "freesurfer/dmri_paths": dmri_paths_execute,
+        "freesurfer/dmri_pathstats": dmri_pathstats_execute,
+        "freesurfer/dmri_projectEndPoints": dmri_project_end_points_execute,
+        "freesurfer/dmri_saveHistograms": dmri_save_histograms_execute,
+        "freesurfer/dmri_spline": dmri_spline_execute,
+        "freesurfer/dmri_stats_ac": dmri_stats_ac_execute,
+        "freesurfer/dmri_train": dmri_train_execute,
+        "freesurfer/dmri_trk2trk": dmri_trk2trk_execute,
+        "freesurfer/dmri_violinPlots": dmri_violin_plots_execute,
+        "freesurfer/dmri_vox2vox": dmri_vox2vox_execute,
+        "freesurfer/dt_recon": dt_recon_execute,
+        "freesurfer/exportGcam": export_gcam_execute,
+        "freesurfer/extract_seg_waveform": extract_seg_waveform_execute,
+        "freesurfer/exvivo-hemi-proc": exvivo_hemi_proc_execute,
+        "freesurfer/feat2segstats": feat2segstats_execute,
+        "freesurfer/feat2surf": feat2surf_execute,
+        "freesurfer/fiducials_calibration": fiducials_calibration_execute,
+        "freesurfer/fiducials_correction": fiducials_correction_execute,
+        "freesurfer/fix_subject-rh": fix_subject_rh_execute,
+        "freesurfer/fix_subject": fix_subject_execute,
+        "freesurfer/fix_subject_corrected-rh": fix_subject_corrected_rh_execute,
+        "freesurfer/fix_subject_corrected": fix_subject_corrected_execute,
+        "freesurfer/fixup_mni_paths": fixup_mni_paths_execute,
+        "freesurfer/flip_4dfp": flip_4dfp_execute,
+        "freesurfer/flirt.newdefault.20080811.sch": flirt_newdefault_20080811_sch_execute,
+        "freesurfer/fname2ext": fname2ext_execute,
+        "freesurfer/fname2stem": fname2stem_execute,
+        "freesurfer/freeview": freeview_execute,
+        "freesurfer/fs-check-version": fs_check_version_execute,
+        "freesurfer/fsPrintHelp": fs_print_help_execute,
+        "freesurfer/fs_install_mcr": fs_install_mcr_execute,
+        "freesurfer/fs_lib_check": fs_lib_check_execute,
+        "freesurfer/fs_run_from_mcr": fs_run_from_mcr_execute,
+        "freesurfer/fs_spmreg.glnxa64": fs_spmreg_glnxa64_execute,
+        "freesurfer/fs_temp_dir": fs_temp_dir_execute,
+        "freesurfer/fs_temp_file": fs_temp_file_execute,
+        "freesurfer/fs_time": fs_time_execute,
+        "freesurfer/fs_tutorial_data": fs_tutorial_data_execute,
+        "freesurfer/fs_update": fs_update_execute,
+        "freesurfer/fscalc": fscalc_execute,
+        "freesurfer/fsdcmdecompress": fsdcmdecompress_execute,
+        "freesurfer/fsl.5.0.2.xyztrans.sch": fsl_5_0_2_xyztrans_sch_execute,
+        "freesurfer/fsl_label2voxel": fsl_label2voxel_execute,
+        "freesurfer/fsl_rigid_register": fsl_rigid_register_execute,
+        "freesurfer/fsl_sub_mgh": fsl_sub_mgh_execute,
+        "freesurfer/fslregister": fslregister_execute,
+        "freesurfer/fspalm": fspalm_execute,
+        "freesurfer/fsr-coreg": fsr_coreg_execute,
+        "freesurfer/fsr-getxopts": fsr_getxopts_execute,
+        "freesurfer/fsr-import": fsr_import_execute,
+        "freesurfer/fsrealpath": fsrealpath_execute,
+        "freesurfer/fsvglrun": fsvglrun_execute,
+        "freesurfer/fvcompare": fvcompare_execute,
+        "freesurfer/gauss_4dfp": gauss_4dfp_execute,
+        "freesurfer/gca-apply": gca_apply_execute,
+        "freesurfer/gcainit": gcainit_execute,
+        "freesurfer/gcaprepone": gcaprepone_execute,
+        "freesurfer/gcatrain": gcatrain_execute,
+        "freesurfer/gcatrainskull": gcatrainskull_execute,
+        "freesurfer/gdcmconv.fs": gdcmconv_fs_execute,
+        "freesurfer/gems_compute_atlas_probs": gems_compute_atlas_probs_execute,
+        "freesurfer/get_label_thickness": get_label_thickness_execute,
+        "freesurfer/getfullpath": getfullpath_execute,
+        "freesurfer/grad_unwarp": grad_unwarp_execute,
+        "freesurfer/groupstats": groupstats_execute,
+        "freesurfer/groupstatsdiff": groupstatsdiff_execute,
+        "freesurfer/gtmseg": gtmseg_execute,
+        "freesurfer/hiam_make_surfaces": hiam_make_surfaces_execute,
+        "freesurfer/hiam_make_template": hiam_make_template_execute,
+        "freesurfer/hiam_register": hiam_register_execute,
+        "freesurfer/histo_compute_joint_density": histo_compute_joint_density_execute,
+        "freesurfer/histo_register_block": histo_register_block_execute,
+        "freesurfer/histo_synthesize": histo_synthesize_execute,
+        "freesurfer/ico_supersample": ico_supersample_execute,
+        "freesurfer/ifh2hdr": ifh2hdr_execute,
+        "freesurfer/imgreg_4dfp": imgreg_4dfp_execute,
+        "freesurfer/inflate_subject-lh": inflate_subject_lh_execute,
+        "freesurfer/inflate_subject-rh": inflate_subject_rh_execute,
+        "freesurfer/inflate_subject": inflate_subject_execute,
+        "freesurfer/inflate_subject3": inflate_subject3_execute,
+        "freesurfer/inflate_subject_new-lh": inflate_subject_new_lh_execute,
+        "freesurfer/inflate_subject_new-rh": inflate_subject_new_rh_execute,
+        "freesurfer/inflate_subject_new": inflate_subject_new_execute,
+        "freesurfer/inflate_subject_sc": inflate_subject_sc_execute,
+        "freesurfer/irepifitvol.glnx64": irepifitvol_glnx64_execute,
+        "freesurfer/irepifitvol": irepifitvol_execute,
+        "freesurfer/is-surface": is_surface_execute,
+        "freesurfer/isanalyze": isanalyze_execute,
+        "freesurfer/isnifti": isnifti_execute,
+        "freesurfer/isolate_labels.csh": isolate_labels_csh_execute,
+        "freesurfer/isolate_labels_keeporigval.csh": isolate_labels_keeporigval_csh_execute,
+        "freesurfer/jkgcatrain": jkgcatrain_execute,
+        "freesurfer/label2flat": label2flat_execute,
+        "freesurfer/label2patch": label2patch_execute,
+        "freesurfer/label_elderly_subject": label_elderly_subject_execute,
+        "freesurfer/label_subject": label_subject_execute,
+        "freesurfer/label_subject_flash": label_subject_flash_execute,
+        "freesurfer/label_subject_mixed": label_subject_mixed_execute,
+        "freesurfer/labels_disjoint": labels_disjoint_execute,
+        "freesurfer/labels_intersect": labels_intersect_execute,
+        "freesurfer/labels_union": labels_union_execute,
+        "freesurfer/list_otl_labels": list_otl_labels_execute,
+        "freesurfer/listsubj": listsubj_execute,
+        "freesurfer/long_create_base_sigma": long_create_base_sigma_execute,
+        "freesurfer/long_create_orig": long_create_orig_execute,
+        "freesurfer/long_mris_slopes": long_mris_slopes_execute,
+        "freesurfer/long_qdec_table": long_qdec_table_execute,
+        "freesurfer/long_stats_combine": long_stats_combine_execute,
+        "freesurfer/long_stats_slopes": long_stats_slopes_execute,
+        "freesurfer/long_stats_tps": long_stats_tps_execute,
+        "freesurfer/long_submit_jobs": long_submit_jobs_execute,
+        "freesurfer/long_submit_postproc": long_submit_postproc_execute,
+        "freesurfer/longmc": longmc_execute,
+        "freesurfer/lpcregister": lpcregister_execute,
+        "freesurfer/lta_convert": lta_convert_execute,
+        "freesurfer/lta_diff": lta_diff_execute,
+        "freesurfer/make-segvol-table": make_segvol_table_execute,
+        "freesurfer/make_average_subcort": make_average_subcort_execute,
+        "freesurfer/make_average_subject": make_average_subject_execute,
+        "freesurfer/make_average_surface": make_average_surface_execute,
+        "freesurfer/make_average_volume": make_average_volume_execute,
+        "freesurfer/make_cortex_label": make_cortex_label_execute,
+        "freesurfer/make_exvivo_filled": make_exvivo_filled_execute,
+        "freesurfer/make_folding_atlas": make_folding_atlas_execute,
+        "freesurfer/make_hemi_mask": make_hemi_mask_execute,
+        "freesurfer/make_symmetric": make_symmetric_execute,
+        "freesurfer/make_upright": make_upright_execute,
+        "freesurfer/makevol": makevol_execute,
+        "freesurfer/map_all_labels-lh": map_all_labels_lh_execute,
+        "freesurfer/map_all_labels": map_all_labels_execute,
+        "freesurfer/map_central_sulcus": map_central_sulcus_execute,
+        "freesurfer/map_to_base": map_to_base_execute,
+        "freesurfer/meanval": meanval_execute,
+        "freesurfer/merge_stats_tables": merge_stats_tables_execute,
+        "freesurfer/mergeseg": mergeseg_execute,
+        "freesurfer/mideface": mideface_execute,
+        "freesurfer/minc2seqinfo": minc2seqinfo_execute,
+        "freesurfer/mkheadsurf": mkheadsurf_execute,
+        "freesurfer/mkima_index.tcl": mkima_index_tcl_execute,
+        "freesurfer/mkmnc_index.tcl": mkmnc_index_tcl_execute,
+        "freesurfer/mksubjdirs": mksubjdirs_execute,
+        "freesurfer/mksurfatlas": mksurfatlas_execute,
+        "freesurfer/mkxsubjreg": mkxsubjreg_execute,
+        "freesurfer/mmppsp": mmppsp_execute,
+        "freesurfer/mni152reg": mni152reg_execute,
+        "freesurfer/morph_only_subject-lh": morph_only_subject_lh_execute,
+        "freesurfer/morph_only_subject-rh": morph_only_subject_rh_execute,
+        "freesurfer/morph_only_subject": morph_only_subject_execute,
+        "freesurfer/morph_rgb-lh": morph_rgb_lh_execute,
+        "freesurfer/morph_rgb-rh": morph_rgb_rh_execute,
+        "freesurfer/morph_subject-lh": morph_subject_lh_execute,
+        "freesurfer/morph_subject-rh": morph_subject_rh_execute,
+        "freesurfer/morph_subject": morph_subject_execute,
+        "freesurfer/morph_tables-lh": morph_tables_lh_execute,
+        "freesurfer/morph_tables-rh": morph_tables_rh_execute,
+        "freesurfer/mpr2mni305": mpr2mni305_execute,
+        "freesurfer/mri-func2sph": mri_func2sph_execute,
+        "freesurfer/mri-funcvits": mri_funcvits_execute,
+        "freesurfer/mri-sph2surf": mri_sph2surf_execute,
+        "freesurfer/mri_3d_photo_recon": mri_3d_photo_recon_execute,
+        "freesurfer/mri_add_new_tp": mri_add_new_tp_execute,
+        "freesurfer/mri_add_xform_to_header": mri_add_xform_to_header_execute,
+        "freesurfer/mri_align_long.csh": mri_align_long_csh_execute,
+        "freesurfer/mri_and": mri_and_execute,
+        "freesurfer/mri_annotation2label": mri_annotation2label_execute,
+        "freesurfer/mri_aparc2aseg": mri_aparc2aseg_execute,
+        "freesurfer/mri_aparc2wmseg": mri_aparc2wmseg_execute,
+        "freesurfer/mri_apply_bias": mri_apply_bias_execute,
+        "freesurfer/mri_average": mri_average_execute,
+        "freesurfer/mri_binarize": mri_binarize_execute,
+        "freesurfer/mri_brain_volume": mri_brain_volume_execute,
+        "freesurfer/mri_brainvol_stats": mri_brainvol_stats_execute,
+        "freesurfer/mri_ca_label": mri_ca_label_execute,
+        "freesurfer/mri_ca_normalize": mri_ca_normalize_execute,
+        "freesurfer/mri_ca_register": mri_ca_register_execute,
+        "freesurfer/mri_ca_tissue_parms": mri_ca_tissue_parms_execute,
+        "freesurfer/mri_ca_train": mri_ca_train_execute,
+        "freesurfer/mri_cal_renormalize_gca": mri_cal_renormalize_gca_execute,
+        "freesurfer/mri_cc": mri_cc_execute,
+        "freesurfer/mri_cnr": mri_cnr_execute,
+        "freesurfer/mri_compile_edits": mri_compile_edits_execute,
+        "freesurfer/mri_compute_bias": mri_compute_bias_execute,
+        "freesurfer/mri_compute_change_map": mri_compute_change_map_execute,
+        "freesurfer/mri_compute_distances": mri_compute_distances_execute,
+        "freesurfer/mri_compute_layer_fractions": mri_compute_layer_fractions_execute,
+        "freesurfer/mri_compute_overlap": mri_compute_overlap_execute,
+        "freesurfer/mri_compute_seg_overlap": mri_compute_seg_overlap_execute,
+        "freesurfer/mri_compute_volume_fractions": mri_compute_volume_fractions_execute,
+        "freesurfer/mri_compute_volume_intensities": mri_compute_volume_intensities_execute,
+        "freesurfer/mri_concat": mri_concat_execute,
+        "freesurfer/mri_concatenate_gcam": mri_concatenate_gcam_execute,
+        "freesurfer/mri_concatenate_lta": mri_concatenate_lta_execute,
+        "freesurfer/mri_convert": mri_convert_execute,
+        "freesurfer/mri_copy_params": mri_copy_params_execute,
+        "freesurfer/mri_copy_values": mri_copy_values_execute,
+        "freesurfer/mri_cor2label": mri_cor2label_execute,
+        "freesurfer/mri_coreg": mri_coreg_execute,
+        "freesurfer/mri_correct_segmentations": mri_correct_segmentations_execute,
+        "freesurfer/mri_create_t2combined": mri_create_t2combined_execute,
+        "freesurfer/mri_create_tests": mri_create_tests_execute,
+        "freesurfer/mri_cvs_check": mri_cvs_check_execute,
+        "freesurfer/mri_cvs_data_copy": mri_cvs_data_copy_execute,
+        "freesurfer/mri_cvs_register": mri_cvs_register_execute,
+        "freesurfer/mri_dct_align": mri_dct_align_execute,
+        "freesurfer/mri_dct_align_binary": mri_dct_align_binary_execute,
+        "freesurfer/mri_deface": mri_deface_execute,
+        "freesurfer/mri_defacer": mri_defacer_execute,
+        "freesurfer/mri_diff": mri_diff_execute,
+        "freesurfer/mri_dist_surf_label": mri_dist_surf_label_execute,
+        "freesurfer/mri_distance_transform": mri_distance_transform_execute,
+        "freesurfer/mri_easyreg": mri_easyreg_execute,
+        "freesurfer/mri_easywarp": mri_easywarp_execute,
+        "freesurfer/mri_edit_segmentation": mri_edit_segmentation_execute,
+        "freesurfer/mri_edit_segmentation_with_surfaces": mri_edit_segmentation_with_surfaces_execute,
+        "freesurfer/mri_edit_wm_with_aseg": mri_edit_wm_with_aseg_execute,
+        "freesurfer/mri_em_register": mri_em_register_execute,
+        "freesurfer/mri_entowm_seg": mri_entowm_seg_execute,
+        "freesurfer/mri_evaluate_morph": mri_evaluate_morph_execute,
+        "freesurfer/mri_extract": mri_extract_execute,
+        "freesurfer/mri_extract_fcd_features": mri_extract_fcd_features_execute,
+        "freesurfer/mri_extract_label": mri_extract_label_execute,
+        "freesurfer/mri_extract_largest_CC": mri_extract_largest_cc_execute,
+        "freesurfer/mri_exvivo_norm": mri_exvivo_norm_execute,
+        "freesurfer/mri_exvivo_strip": mri_exvivo_strip_execute,
+        "freesurfer/mri_fdr": mri_fdr_execute,
+        "freesurfer/mri_fieldsign": mri_fieldsign_execute,
+        "freesurfer/mri_fill": mri_fill_execute,
+        "freesurfer/mri_fit_bias": mri_fit_bias_execute,
+        "freesurfer/mri_fslmat_to_lta": mri_fslmat_to_lta_execute,
+        "freesurfer/mri_fuse_intensity_images": mri_fuse_intensity_images_execute,
+        "freesurfer/mri_fuse_segmentations": mri_fuse_segmentations_execute,
+        "freesurfer/mri_fwhm": mri_fwhm_execute,
+        "freesurfer/mri_gca_ambiguous": mri_gca_ambiguous_execute,
+        "freesurfer/mri_gcab_train": mri_gcab_train_execute,
+        "freesurfer/mri_gcut": mri_gcut_execute,
+        "freesurfer/mri_gdfglm": mri_gdfglm_execute,
+        "freesurfer/mri_glmfit-sim": mri_glmfit_sim_execute,
+        "freesurfer/mri_glmfit": mri_glmfit_execute,
+        "freesurfer/mri_gradient_info": mri_gradient_info_execute,
+        "freesurfer/mri_gradunwarp": mri_gradunwarp_execute,
+        "freesurfer/mri_gtmpvc": mri_gtmpvc_execute,
+        "freesurfer/mri_gtmseg": mri_gtmseg_execute,
+        "freesurfer/mri_hausdorff_dist": mri_hausdorff_dist_execute,
+        "freesurfer/mri_head": mri_head_execute,
+        "freesurfer/mri_hires_register": mri_hires_register_execute,
+        "freesurfer/mri_histo_eq": mri_histo_eq_execute,
+        "freesurfer/mri_info": mri_info_execute,
+        "freesurfer/mri_jacobian": mri_jacobian_execute,
+        "freesurfer/mri_joint_density": mri_joint_density_execute,
+        "freesurfer/mri_label2label": mri_label2label_execute,
+        "freesurfer/mri_label2vol": mri_label2vol_execute,
+        "freesurfer/mri_label_histo": mri_label_histo_execute,
+        "freesurfer/mri_label_vals": mri_label_vals_execute,
+        "freesurfer/mri_label_volume": mri_label_volume_execute,
+        "freesurfer/mri_linear_align": mri_linear_align_execute,
+        "freesurfer/mri_linear_align_binary": mri_linear_align_binary_execute,
+        "freesurfer/mri_linear_register": mri_linear_register_execute,
+        "freesurfer/mri_log_likelihood": mri_log_likelihood_execute,
+        "freesurfer/mri_long_normalize": mri_long_normalize_execute,
+        "freesurfer/mri_make_bem_surfaces": mri_make_bem_surfaces_execute,
+        "freesurfer/mri_make_uchar": mri_make_uchar_execute,
+        "freesurfer/mri_map_cpdat": mri_map_cpdat_execute,
+        "freesurfer/mri_maps2csd": mri_maps2csd_execute,
+        "freesurfer/mri_mark_temporal_lobe": mri_mark_temporal_lobe_execute,
+        "freesurfer/mri_mask": mri_mask_execute,
+        "freesurfer/mri_matrix_multiply": mri_matrix_multiply_execute,
+        "freesurfer/mri_mc": mri_mc_execute,
+        "freesurfer/mri_mcsim": mri_mcsim_execute,
+        "freesurfer/mri_mergelabels": mri_mergelabels_execute,
+        "freesurfer/mri_mi": mri_mi_execute,
+        "freesurfer/mri_modify": mri_modify_execute,
+        "freesurfer/mri_morphology": mri_morphology_execute,
+        "freesurfer/mri_motion_correct": mri_motion_correct_execute,
+        "freesurfer/mri_motion_correct2": mri_motion_correct2_execute,
+        "freesurfer/mri_ms_fitparms": mri_ms_fitparms_execute,
+        "freesurfer/mri_nl_align": mri_nl_align_execute,
+        "freesurfer/mri_nl_align_binary": mri_nl_align_binary_execute,
+        "freesurfer/mri_nlfilter": mri_nlfilter_execute,
+        "freesurfer/mri_normalize": mri_normalize_execute,
+        "freesurfer/mri_normalize_tp2": mri_normalize_tp2_execute,
+        "freesurfer/mri_nu_correct.mni": mri_nu_correct_mni_execute,
+        "freesurfer/mri_or": mri_or_execute,
+        "freesurfer/mri_paint": mri_paint_execute,
+        "freesurfer/mri_parse_sdcmdir": mri_parse_sdcmdir_execute,
+        "freesurfer/mri_path2label": mri_path2label_execute,
+        "freesurfer/mri_polv": mri_polv_execute,
+        "freesurfer/mri_pretess": mri_pretess_execute,
+        "freesurfer/mri_probe_ima": mri_probe_ima_execute,
+        "freesurfer/mri_probedicom": mri_probedicom_execute,
+        "freesurfer/mri_reduce": mri_reduce_execute,
+        "freesurfer/mri_refine_seg": mri_refine_seg_execute,
+        "freesurfer/mri_relabel_hypointensities": mri_relabel_hypointensities_execute,
+        "freesurfer/mri_relabel_nonwm_hypos": mri_relabel_nonwm_hypos_execute,
+        "freesurfer/mri_remove_neck": mri_remove_neck_execute,
+        "freesurfer/mri_reorient_LR.csh": mri_reorient_lr_csh_execute,
+        "freesurfer/mri_rf_label": mri_rf_label_execute,
+        "freesurfer/mri_rf_long_label": mri_rf_long_label_execute,
+        "freesurfer/mri_rf_long_train": mri_rf_long_train_execute,
+        "freesurfer/mri_rf_train": mri_rf_train_execute,
+        "freesurfer/mri_ribbon": mri_ribbon_execute,
+        "freesurfer/mri_rigid_register": mri_rigid_register_execute,
+        "freesurfer/mri_robust_register": mri_robust_register_execute,
+        "freesurfer/mri_robust_template": mri_robust_template_execute,
+        "freesurfer/mri_sbbr": mri_sbbr_execute,
+        "freesurfer/mri_sclimbic_seg": mri_sclimbic_seg_execute,
+        "freesurfer/mri_seg_diff": mri_seg_diff_execute,
+        "freesurfer/mri_seg_overlap": mri_seg_overlap_execute,
+        "freesurfer/mri_segcentroids": mri_segcentroids_execute,
+        "freesurfer/mri_seghead": mri_seghead_execute,
+        "freesurfer/mri_segment": mri_segment_execute,
+        "freesurfer/mri_segment_hypothalamic_subunits": mri_segment_hypothalamic_subunits_execute,
+        "freesurfer/mri_segment_thalamic_nuclei_dti_cnn": mri_segment_thalamic_nuclei_dti_cnn_execute,
+        "freesurfer/mri_segreg": mri_segreg_execute,
+        "freesurfer/mri_segstats": mri_segstats_execute,
+        "freesurfer/mri_stats2seg": mri_stats2seg_execute,
+        "freesurfer/mri_stopmask": mri_stopmask_execute,
+        "freesurfer/mri_strip_nonwhite": mri_strip_nonwhite_execute,
+        "freesurfer/mri_strip_subject_info": mri_strip_subject_info_execute,
+        "freesurfer/mri_surf2surf": mri_surf2surf_execute,
+        "freesurfer/mri_surf2vol": mri_surf2vol_execute,
+        "freesurfer/mri_surf2volseg": mri_surf2volseg_execute,
+        "freesurfer/mri_surfacemask": mri_surfacemask_execute,
+        "freesurfer/mri_surfcluster": mri_surfcluster_execute,
+        "freesurfer/mri_synthesize": mri_synthesize_execute,
+        "freesurfer/mri_synthmorph": mri_synthmorph_execute,
+        "freesurfer/mri_synthseg": mri_synthseg_execute,
+        "freesurfer/mri_synthsr": mri_synthsr_execute,
+        "freesurfer/mri_synthsr_hyperfine": mri_synthsr_hyperfine_execute,
+        "freesurfer/mri_synthstrip": mri_synthstrip_execute,
+        "freesurfer/mri_tessellate": mri_tessellate_execute,
+        "freesurfer/mri_threshold": mri_threshold_execute,
+        "freesurfer/mri_topologycorrection": mri_topologycorrection_execute,
+        "freesurfer/mri_train": mri_train_execute,
+        "freesurfer/mri_transform": mri_transform_execute,
+        "freesurfer/mri_twoclass": mri_twoclass_execute,
+        "freesurfer/mri_validate_skull_stripped": mri_validate_skull_stripped_execute,
+        "freesurfer/mri_vessel_segment": mri_vessel_segment_execute,
+        "freesurfer/mri_vol2label": mri_vol2label_execute,
+        "freesurfer/mri_vol2surf": mri_vol2surf_execute,
+        "freesurfer/mri_vol2vol": mri_vol2vol_execute,
+        "freesurfer/mri_volcluster": mri_volcluster_execute,
+        "freesurfer/mri_voldiff": mri_voldiff_execute,
+        "freesurfer/mri_volsynth": mri_volsynth_execute,
+        "freesurfer/mri_warp_convert": mri_warp_convert_execute,
+        "freesurfer/mri_watershed": mri_watershed_execute,
+        "freesurfer/mri_wbc": mri_wbc_execute,
+        "freesurfer/mri_xvolavg": mri_xvolavg_execute,
+        "freesurfer/mri_z2p": mri_z2p_execute,
+        "freesurfer/mris2rgb": mris2rgb_execute,
+        "freesurfer/mris_AA_shrinkwrap": mris_aa_shrinkwrap_execute,
+        "freesurfer/mris_BA_segment": mris_ba_segment_execute,
+        "freesurfer/mris_add_template": mris_add_template_execute,
+        "freesurfer/mris_anatomical_stats": mris_anatomical_stats_execute,
+        "freesurfer/mris_annot_diff": mris_annot_diff_execute,
+        "freesurfer/mris_annot_to_segmentation": mris_annot_to_segmentation_execute,
+        "freesurfer/mris_apply_reg": mris_apply_reg_execute,
+        "freesurfer/mris_autodet_gwstats": mris_autodet_gwstats_execute,
+        "freesurfer/mris_average_curvature": mris_average_curvature_execute,
+        "freesurfer/mris_ca_deform": mris_ca_deform_execute,
+        "freesurfer/mris_ca_label": mris_ca_label_execute,
+        "freesurfer/mris_ca_train": mris_ca_train_execute,
+        "freesurfer/mris_calc": mris_calc_execute,
+        "freesurfer/mris_compute_acorr": mris_compute_acorr_execute,
+        "freesurfer/mris_compute_layer_intensities": mris_compute_layer_intensities_execute,
+        "freesurfer/mris_compute_lgi": mris_compute_lgi_execute,
+        "freesurfer/mris_compute_overlap": mris_compute_overlap_execute,
+        "freesurfer/mris_compute_parc_overlap": mris_compute_parc_overlap_execute,
+        "freesurfer/mris_compute_volume_fractions": mris_compute_volume_fractions_execute,
+        "freesurfer/mris_congeal": mris_congeal_execute,
+        "freesurfer/mris_convert": mris_convert_execute,
+        "freesurfer/mris_copy_header": mris_copy_header_execute,
+        "freesurfer/mris_curvature": mris_curvature_execute,
+        "freesurfer/mris_curvature2image": mris_curvature2image_execute,
+        "freesurfer/mris_curvature_stats": mris_curvature_stats_execute,
+        "freesurfer/mris_defects_pointset": mris_defects_pointset_execute,
+        "freesurfer/mris_deform": mris_deform_execute,
+        "freesurfer/mris_diff": mris_diff_execute,
+        "freesurfer/mris_distance_map": mris_distance_map_execute,
+        "freesurfer/mris_distance_to_label": mris_distance_to_label_execute,
+        "freesurfer/mris_distance_transform": mris_distance_transform_execute,
+        "freesurfer/mris_divide_parcellation": mris_divide_parcellation_execute,
+        "freesurfer/mris_entropy": mris_entropy_execute,
+        "freesurfer/mris_errors": mris_errors_execute,
+        "freesurfer/mris_estimate_wm": mris_estimate_wm_execute,
+        "freesurfer/mris_euler_number": mris_euler_number_execute,
+        "freesurfer/mris_expand": mris_expand_execute,
+        "freesurfer/mris_extract_main_component": mris_extract_main_component_execute,
+        "freesurfer/mris_extract_patches": mris_extract_patches_execute,
+        "freesurfer/mris_extract_values": mris_extract_values_execute,
+        "freesurfer/mris_exvivo_surfaces": mris_exvivo_surfaces_execute,
+        "freesurfer/mris_fill": mris_fill_execute,
+        "freesurfer/mris_find_flat_regions": mris_find_flat_regions_execute,
+        "freesurfer/mris_fix_topology": mris_fix_topology_execute,
+        "freesurfer/mris_flatten": mris_flatten_execute,
+        "freesurfer/mris_fwhm": mris_fwhm_execute,
+        "freesurfer/mris_gradient": mris_gradient_execute,
+        "freesurfer/mris_hausdorff_dist": mris_hausdorff_dist_execute,
+        "freesurfer/mris_image2vtk": mris_image2vtk_execute,
+        "freesurfer/mris_inflate": mris_inflate_execute,
+        "freesurfer/mris_info": mris_info_execute,
+        "freesurfer/mris_init_global_tractography": mris_init_global_tractography_execute,
+        "freesurfer/mris_intensity_profile": mris_intensity_profile_execute,
+        "freesurfer/mris_interpolate_warp": mris_interpolate_warp_execute,
+        "freesurfer/mris_jacobian": mris_jacobian_execute,
+        "freesurfer/mris_label2annot": mris_label2annot_execute,
+        "freesurfer/mris_label_area": mris_label_area_execute,
+        "freesurfer/mris_label_calc": mris_label_calc_execute,
+        "freesurfer/mris_label_mode": mris_label_mode_execute,
+        "freesurfer/mris_left_right_register": mris_left_right_register_execute,
+        "freesurfer/mris_make_average_surface": mris_make_average_surface_execute,
+        "freesurfer/mris_make_face_parcellation": mris_make_face_parcellation_execute,
+        "freesurfer/mris_make_surfaces": mris_make_surfaces_execute,
+        "freesurfer/mris_make_template": mris_make_template_execute,
+        "freesurfer/mris_map_cuts": mris_map_cuts_execute,
+        "freesurfer/mris_mef_surfaces": mris_mef_surfaces_execute,
+        "freesurfer/mris_merge_parcellations": mris_merge_parcellations_execute,
+        "freesurfer/mris_mesh_subdivide": mris_mesh_subdivide_execute,
+        "freesurfer/mris_morph_stats": mris_morph_stats_execute,
+        "freesurfer/mris_ms_refine": mris_ms_refine_execute,
+        "freesurfer/mris_multimodal": mris_multimodal_execute,
+        "freesurfer/mris_multimodal_surface_placement": mris_multimodal_surface_placement_execute,
+        "freesurfer/mris_multiscale_stats": mris_multiscale_stats_execute,
+        "freesurfer/mris_niters2fwhm": mris_niters2fwhm_execute,
+        "freesurfer/mris_nudge": mris_nudge_execute,
+        "freesurfer/mris_parcellate_connectivity": mris_parcellate_connectivity_execute,
+        "freesurfer/mris_place_surface": mris_place_surface_execute,
+        "freesurfer/mris_pmake": mris_pmake_execute,
+        "freesurfer/mris_preproc": mris_preproc_execute,
+        "freesurfer/mris_profileClustering": mris_profile_clustering_execute,
+        "freesurfer/mris_refine_surfaces": mris_refine_surfaces_execute,
+        "freesurfer/mris_register": mris_register_execute,
+        "freesurfer/mris_register_label_map": mris_register_label_map_execute,
+        "freesurfer/mris_register_to_label": mris_register_to_label_execute,
+        "freesurfer/mris_register_to_volume": mris_register_to_volume_execute,
+        "freesurfer/mris_remesh": mris_remesh_execute,
+        "freesurfer/mris_remove_intersection": mris_remove_intersection_execute,
+        "freesurfer/mris_remove_negative_vertices": mris_remove_negative_vertices_execute,
+        "freesurfer/mris_remove_variance": mris_remove_variance_execute,
+        "freesurfer/mris_reposition_surface": mris_reposition_surface_execute,
+        "freesurfer/mris_resample": mris_resample_execute,
+        "freesurfer/mris_rescale": mris_rescale_execute,
+        "freesurfer/mris_reverse": mris_reverse_execute,
+        "freesurfer/mris_rf_label": mris_rf_label_execute,
+        "freesurfer/mris_rf_train": mris_rf_train_execute,
+        "freesurfer/mris_rotate": mris_rotate_execute,
+        "freesurfer/mris_sample_label": mris_sample_label_execute,
+        "freesurfer/mris_sample_parc": mris_sample_parc_execute,
+        "freesurfer/mris_seg2annot": mris_seg2annot_execute,
+        "freesurfer/mris_segment": mris_segment_execute,
+        "freesurfer/mris_segment_vals": mris_segment_vals_execute,
+        "freesurfer/mris_segmentation_stats": mris_segmentation_stats_execute,
+        "freesurfer/mris_shrinkwrap": mris_shrinkwrap_execute,
+        "freesurfer/mris_simulate_atrophy": mris_simulate_atrophy_execute,
+        "freesurfer/mris_skeletonize": mris_skeletonize_execute,
+        "freesurfer/mris_smooth": mris_smooth_execute,
+        "freesurfer/mris_smooth_intracortical": mris_smooth_intracortical_execute,
+        "freesurfer/mris_sphere": mris_sphere_execute,
+        "freesurfer/mris_spherical_average": mris_spherical_average_execute,
+        "freesurfer/mris_surf2vtk": mris_surf2vtk_execute,
+        "freesurfer/mris_surface_stats": mris_surface_stats_execute,
+        "freesurfer/mris_surface_to_vol_distances": mris_surface_to_vol_distances_execute,
+        "freesurfer/mris_talairach": mris_talairach_execute,
+        "freesurfer/mris_target_pos": mris_target_pos_execute,
+        "freesurfer/mris_thickness": mris_thickness_execute,
+        "freesurfer/mris_thickness_comparison": mris_thickness_comparison_execute,
+        "freesurfer/mris_thickness_diff": mris_thickness_diff_execute,
+        "freesurfer/mris_topo_fixer": mris_topo_fixer_execute,
+        "freesurfer/mris_transform": mris_transform_execute,
+        "freesurfer/mris_translate_annotation": mris_translate_annotation_execute,
+        "freesurfer/mris_transmantle_dysplasia_paths": mris_transmantle_dysplasia_paths_execute,
+        "freesurfer/mris_volmask": mris_volmask_execute,
+        "freesurfer/mris_volmask_novtk": mris_volmask_novtk_execute,
+        "freesurfer/mris_volmask_vtk": mris_volmask_vtk_execute,
+        "freesurfer/mris_volsmooth": mris_volsmooth_execute,
+        "freesurfer/mris_volume": mris_volume_execute,
+        "freesurfer/mris_warp": mris_warp_execute,
+        "freesurfer/mris_watershed": mris_watershed_execute,
+        "freesurfer/mris_wm_volume": mris_wm_volume_execute,
+        "freesurfer/mrisp_paint": mrisp_paint_execute,
+        "freesurfer/mrisp_write": mrisp_write_execute,
+        "freesurfer/ms_refine_subject": ms_refine_subject_execute,
+        "freesurfer/nmovie_qt": nmovie_qt_execute,
+        "freesurfer/oct_register_mosaic": oct_register_mosaic_execute,
+        "freesurfer/optseq2": optseq2_execute,
+        "freesurfer/orientLAS": orient_las_execute,
+        "freesurfer/parc_atlas_jackknife_test": parc_atlas_jackknife_test_execute,
+        "freesurfer/pctsurfcon": pctsurfcon_execute,
+        "freesurfer/plot_structure_stats.tcl": plot_structure_stats_tcl_execute,
+        "freesurfer/pointset2label": pointset2label_execute,
+        "freesurfer/polyorder": polyorder_execute,
+        "freesurfer/post-recon-all": post_recon_all_execute,
+        "freesurfer/predict_v1.sh": predict_v1_sh_execute,
+        "freesurfer/print_unique_labels.csh": print_unique_labels_csh_execute,
+        "freesurfer/qatools.py": qatools_py_execute,
+        "freesurfer/quantifyBrainstemStructures.sh": quantify_brainstem_structures_sh_execute,
+        "freesurfer/quantifyHAsubregions.sh": quantify_hasubregions_sh_execute,
+        "freesurfer/quantifyThalamicNuclei.sh": quantify_thalamic_nuclei_sh_execute,
+        "freesurfer/rbbr": rbbr_execute,
+        "freesurfer/rca-base-init": rca_base_init_execute,
+        "freesurfer/rca-config": rca_config_execute,
+        "freesurfer/rca-config2csh": rca_config2csh_execute,
+        "freesurfer/rca-fix-ento": rca_fix_ento_execute,
+        "freesurfer/rca-long-tp-init": rca_long_tp_init_execute,
+        "freesurfer/rcbf-prep": rcbf_prep_execute,
+        "freesurfer/recon-all-clinical.sh": recon_all_clinical_sh_execute,
+        "freesurfer/recon-all-exvivo": recon_all_exvivo_execute,
+        "freesurfer/recon-all": recon_all_execute,
+        "freesurfer/reconbatchjobs": reconbatchjobs_execute,
+        "freesurfer/reg-feat2anat": reg_feat2anat_execute,
+        "freesurfer/reg-mni305.2mm": reg_mni305_2mm_execute,
+        "freesurfer/reg2subject": reg2subject_execute,
+        "freesurfer/regdat2xfm": regdat2xfm_execute,
+        "freesurfer/register.csh": register_csh_execute,
+        "freesurfer/register_child": register_child_execute,
+        "freesurfer/register_elderly_subject": register_elderly_subject_execute,
+        "freesurfer/register_subject": register_subject_execute,
+        "freesurfer/register_subject_flash": register_subject_flash_execute,
+        "freesurfer/reinflate_subject-lh": reinflate_subject_lh_execute,
+        "freesurfer/reinflate_subject-rh": reinflate_subject_rh_execute,
+        "freesurfer/reinflate_subject": reinflate_subject_execute,
+        "freesurfer/remove_talairach": remove_talairach_execute,
+        "freesurfer/renormalize_T1_subject": renormalize_t1_subject_execute,
+        "freesurfer/renormalize_subject_keep_editting": renormalize_subject_keep_editting_execute,
+        "freesurfer/reregister_subject_mixed": reregister_subject_mixed_execute,
+        "freesurfer/rtview": rtview_execute,
+        "freesurfer/run-qdec-glm": run_qdec_glm_execute,
+        "freesurfer/run_SegmentSubfieldsT1Longitudinal.sh": run_segment_subfields_t1_longitudinal_sh_execute,
+        "freesurfer/run_SegmentSubject.sh": run_segment_subject_sh_execute,
+        "freesurfer/run_SegmentThalamicNuclei.sh": run_segment_thalamic_nuclei_sh_execute,
+        "freesurfer/run_mris_preproc": run_mris_preproc_execute,
+        "freesurfer/run_samseg": run_samseg_execute,
+        "freesurfer/run_samseg_long": run_samseg_long_execute,
+        "freesurfer/run_segmentSubjectT1T2_autoEstimateAlveusML.sh": run_segment_subject_t1_t2_auto_estimate_alveus_ml_sh_execute,
+        "freesurfer/run_segmentSubjectT1_autoEstimateAlveusML.sh": run_segment_subject_t1_auto_estimate_alveus_ml_sh_execute,
+        "freesurfer/run_segmentSubjectT2_autoEstimateAlveusML.sh": run_segment_subject_t2_auto_estimate_alveus_ml_sh_execute,
+        "freesurfer/samseg-long": samseg_long_execute,
+        "freesurfer/samseg": samseg_execute,
+        "freesurfer/samseg2recon": samseg2recon_execute,
+        "freesurfer/samsegmesh2surf": samsegmesh2surf_execute,
+        "freesurfer/sbtiv": sbtiv_execute,
+        "freesurfer/seg2filled": seg2filled_execute,
+        "freesurfer/seg2recon": seg2recon_execute,
+        "freesurfer/segmentBS.sh": segment_bs_sh_execute,
+        "freesurfer/segmentHA_T1.sh": segment_ha_t1_sh_execute,
+        "freesurfer/segmentHA_T1_long.sh": segment_ha_t1_long_sh_execute,
+        "freesurfer/segmentHA_T2.sh": segment_ha_t2_sh_execute,
+        "freesurfer/segmentSubjectT1T2_autoEstimateAlveusML": segment_subject_t1_t2_auto_estimate_alveus_ml_execute,
+        "freesurfer/segmentSubjectT1_autoEstimateAlveusML": segment_subject_t1_auto_estimate_alveus_ml_execute,
+        "freesurfer/segmentSubjectT2_autoEstimateAlveusML": segment_subject_t2_auto_estimate_alveus_ml_execute,
+        "freesurfer/segmentThalamicNuclei.sh": segment_thalamic_nuclei_sh_execute,
+        "freesurfer/segment_monkey": segment_monkey_execute,
+        "freesurfer/segment_subject": segment_subject_execute,
+        "freesurfer/segment_subject_notal": segment_subject_notal_execute,
+        "freesurfer/segment_subject_notal2": segment_subject_notal2_execute,
+        "freesurfer/segment_subject_old_skull_strip": segment_subject_old_skull_strip_execute,
+        "freesurfer/segment_subject_sc": segment_subject_sc_execute,
+        "freesurfer/segment_subregions": segment_subregions_execute,
+        "freesurfer/segpons": segpons_execute,
+        "freesurfer/setlabelstat": setlabelstat_execute,
+        "freesurfer/sfa2fieldsign": sfa2fieldsign_execute,
+        "freesurfer/slicedelay": slicedelay_execute,
+        "freesurfer/sphere_subject-lh": sphere_subject_lh_execute,
+        "freesurfer/sphere_subject-rh": sphere_subject_rh_execute,
+        "freesurfer/sphere_subject": sphere_subject_execute,
+        "freesurfer/spm_t_to_b": spm_t_to_b_execute,
+        "freesurfer/spmregister": spmregister_execute,
+        "freesurfer/sratio": sratio_execute,
+        "freesurfer/stat_normalize": stat_normalize_execute,
+        "freesurfer/stattablediff": stattablediff_execute,
+        "freesurfer/stem2fname": stem2fname_execute,
+        "freesurfer/surf2vol": surf2vol_execute,
+        "freesurfer/surfreg": surfreg_execute,
+        "freesurfer/swi_preprocess": swi_preprocess_execute,
+        "freesurfer/swi_process": swi_process_execute,
+        "freesurfer/t4img_4dfp": t4img_4dfp_execute,
+        "freesurfer/t4imgs_4dfp": t4imgs_4dfp_execute,
+        "freesurfer/table2map": table2map_execute,
+        "freesurfer/tal_QC_AZS": tal_qc_azs_execute,
+        "freesurfer/tal_compare": tal_compare_execute,
+        "freesurfer/talairach": talairach_execute,
+        "freesurfer/talairach2": talairach2_execute,
+        "freesurfer/talairach_afd": talairach_afd_execute,
+        "freesurfer/talairach_avi": talairach_avi_execute,
+        "freesurfer/talairach_mgh": talairach_mgh_execute,
+        "freesurfer/talsegprob": talsegprob_execute,
+        "freesurfer/testOrientationPlanesFromParcellation": test_orientation_planes_from_parcellation_execute,
+        "freesurfer/test_recon-all.csh": test_recon_all_csh_execute,
+        "freesurfer/test_tutorials.sh": test_tutorials_sh_execute,
+        "freesurfer/thickdiffmap": thickdiffmap_execute,
+        "freesurfer/tkmedit": tkmedit_execute,
+        "freesurfer/tkmeditfv": tkmeditfv_execute,
+        "freesurfer/tkregister2": tkregister2_execute,
+        "freesurfer/tkregister2_cmdl": tkregister2_cmdl_execute,
+        "freesurfer/tkregisterfv": tkregisterfv_execute,
+        "freesurfer/tksurfer": tksurfer_execute,
+        "freesurfer/tksurferfv": tksurferfv_execute,
+        "freesurfer/trac-all": trac_all_execute,
+        "freesurfer/trac-paths": trac_paths_execute,
+        "freesurfer/trac-preproc": trac_preproc_execute,
+        "freesurfer/tractstats2table": tractstats2table_execute,
+        "freesurfer/train-gcs-atlas": train_gcs_atlas_execute,
+        "freesurfer/tridec": tridec_execute,
+        "freesurfer/trk_tools": trk_tools_execute,
+        "freesurfer/unpack_ima.tcl": unpack_ima_tcl_execute,
+        "freesurfer/unpack_ima1.tcl": unpack_ima1_tcl_execute,
+        "freesurfer/unpack_mnc.tcl": unpack_mnc_tcl_execute,
+        "freesurfer/unpackimadir": unpackimadir_execute,
+        "freesurfer/unpackimadir2": unpackimadir2_execute,
+        "freesurfer/unpackmincdir": unpackmincdir_execute,
+        "freesurfer/unpacksdcmdir": unpacksdcmdir_execute,
+        "freesurfer/ventfix": ventfix_execute,
+        "freesurfer/vertexvol": vertexvol_execute,
+        "freesurfer/vno_match_check": vno_match_check_execute,
+        "freesurfer/vol2segavg": vol2segavg_execute,
+        "freesurfer/vol2subfield": vol2subfield_execute,
+        "freesurfer/vol2symsurf": vol2symsurf_execute,
+        "freesurfer/vsm-smooth": vsm_smooth_execute,
+        "freesurfer/wfilemask": wfilemask_execute,
+        "freesurfer/wm-anat-snr": wm_anat_snr_execute,
+        "freesurfer/wmedits2surf": wmedits2surf_execute,
+        "freesurfer/wmsaseg": wmsaseg_execute,
+        "freesurfer/xcerebralseg": xcerebralseg_execute,
+        "freesurfer/xcorr": xcorr_execute,
+        "freesurfer/xfmrot": xfmrot_execute,
+        "freesurfer/xhemi-tal": xhemi_tal_execute,
+        "freesurfer/xhemireg": xhemireg_execute,
+        "freesurfer/xsanatreg": xsanatreg_execute,
+        "freesurfer/zero_lt_4dfp": zero_lt_4dfp_execute,
+    }[params["@type"]](params, runner)