niwrap-afni 0.5.0__py3-none-any.whl → 0.5.2__py3-none-any.whl

niwrap_afni/afni/v_3d_afnito_niml.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 V_3D_AFNITO_NIML_METADATA = Metadata(
-    id="98f63f2e946d67b9373a37700e5abbc719dca8ea.boutiques",
+    id="ce21f3bbaff6b810f369fc126dbb776c6ff48469.boutiques",
     name="3dAFNItoNIML",
     package="afni",
     container_image_tag="afni/afni_make_build:AFNI_24.2.06",
@@ -16,6 +16,9 @@ V_3D_AFNITO_NIML_METADATA = Metadata(
 V3dAfnitoNimlParameters = typing.TypedDict('V3dAfnitoNimlParameters', {
     "__STYX_TYPE__": typing.Literal["3dAFNItoNIML"],
     "dset": InputPathType,
+    "data": bool,
+    "ascii": bool,
+    "tcp": typing.NotRequired[str | None],
 })
 
 
@@ -60,19 +63,30 @@ class V3dAfnitoNimlOutputs(typing.NamedTuple):
 
 def v_3d_afnito_niml_params(
     dset: InputPathType,
+    data: bool = False,
+    ascii_: bool = False,
+    tcp: str | None = None,
 ) -> V3dAfnitoNimlParameters:
     """
     Build parameters.
     
     Args:
         dset: AFNI dataset.
+        data: Also put the data into the output (will be huge).
+        ascii_: Format in ASCII, not binary (even huger).
+        tcp: Instead of stdout, send the dataset to a socket. Implies '-data'\
+            as well.
     Returns:
         Parameter dictionary
     """
     params = {
         "__STYXTYPE__": "3dAFNItoNIML",
         "dset": dset,
+        "data": data,
+        "ascii": ascii_,
     }
+    if tcp is not None:
+        params["tcp"] = tcp
     return params
 
 
@@ -91,8 +105,16 @@ def v_3d_afnito_niml_cargs(
     """
     cargs = []
     cargs.append("3dAFNItoNIML")
-    cargs.append("[OPTIONS]")
     cargs.append(execution.input_file(params.get("dset")))
+    if params.get("data"):
+        cargs.append("-data")
+    if params.get("ascii"):
+        cargs.append("-ascii")
+    if params.get("tcp") is not None:
+        cargs.extend([
+            "-tcp",
+            params.get("tcp")
+        ])
     return cargs
 
 
@@ -142,6 +164,9 @@ def v_3d_afnito_niml_execute(
 
 def v_3d_afnito_niml(
     dset: InputPathType,
+    data: bool = False,
+    ascii_: bool = False,
+    tcp: str | None = None,
     runner: Runner | None = None,
 ) -> V3dAfnitoNimlOutputs:
     """
@@ -154,6 +179,10 @@ def v_3d_afnito_niml(
     
     Args:
         dset: AFNI dataset.
+        data: Also put the data into the output (will be huge).
+        ascii_: Format in ASCII, not binary (even huger).
+        tcp: Instead of stdout, send the dataset to a socket. Implies '-data'\
+            as well.
         runner: Command runner.
     Returns:
         NamedTuple of outputs (described in `V3dAfnitoNimlOutputs`).
@@ -162,6 +191,9 @@ def v_3d_afnito_niml(
     execution = runner.start_execution(V_3D_AFNITO_NIML_METADATA)
     params = v_3d_afnito_niml_params(
         dset=dset,
+        data=data,
+        ascii_=ascii_,
+        tcp=tcp,
     )
     return v_3d_afnito_niml_execute(params, execution)
 

niwrap_afni/afni/v_3d_amp_to_rsfc.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 V_3D_AMP_TO_RSFC_METADATA = Metadata(
-    id="27e3a8435ad8a4458d62e5fc746c88a2665d19fa.boutiques",
+    id="942616944d84c853b47e970f882430a015aec06f.boutiques",
     name="3dAmpToRSFC",
     package="afni",
     container_image_tag="afni/afni_make_build:AFNI_24.2.06",
@@ -20,6 +20,7 @@ V3dAmpToRsfcParameters = typing.TypedDict('V3dAmpToRsfcParameters', {
     "prefix": str,
     "band": list[float],
     "mask": typing.NotRequired[InputPathType | None],
+    "nifti": bool,
 })
 
 
@@ -83,6 +84,7 @@ def v_3d_amp_to_rsfc_params(
     in_amp: InputPathType | None = None,
     in_pow: InputPathType | None = None,
     mask: InputPathType | None = None,
+    nifti: bool = False,
 ) -> V3dAmpToRsfcParameters:
     """
     Build parameters.
@@ -97,6 +99,7 @@ def v_3d_amp_to_rsfc_params(
         in_pow: Input file of a one-sided power spectrum, such as output by\
             3dLombScargle.
         mask: Volume mask of voxels to include for calculations.
+        nifti: Output files as *.nii.gz (default is BRIK/HEAD).
     Returns:
         Parameter dictionary
     """
@@ -104,6 +107,7 @@ def v_3d_amp_to_rsfc_params(
         "__STYXTYPE__": "3dAmpToRSFC",
         "prefix": prefix,
         "band": band,
+        "nifti": nifti,
     }
     if in_amp is not None:
         params["in_amp"] = in_amp
@@ -129,19 +133,16 @@ def v_3d_amp_to_rsfc_cargs(
     """
     cargs = []
     cargs.append("3dAmpToRSFC")
-    cargs.append("{")
     if params.get("in_amp") is not None:
         cargs.extend([
             "-in_amp",
             execution.input_file(params.get("in_amp"))
         ])
-    cargs.append("|")
     if params.get("in_pow") is not None:
         cargs.extend([
             "-in_pow",
             execution.input_file(params.get("in_pow"))
         ])
-    cargs.append("}")
     cargs.extend([
         "-prefix",
         params.get("prefix")
@@ -150,16 +151,13 @@ def v_3d_amp_to_rsfc_cargs(
         "-band",
         *map(str, params.get("band"))
     ])
-    cargs.append("{")
     if params.get("mask") is not None:
         cargs.extend([
             "-mask",
             execution.input_file(params.get("mask"))
         ])
-    cargs.append("}")
-    cargs.append("{")
-    cargs.append("-nifti")
-    cargs.append("}")
+    if params.get("nifti"):
+        cargs.append("-nifti")
     return cargs
 
 
@@ -218,6 +216,7 @@ def v_3d_amp_to_rsfc(
     in_amp: InputPathType | None = None,
     in_pow: InputPathType | None = None,
     mask: InputPathType | None = None,
+    nifti: bool = False,
     runner: Runner | None = None,
 ) -> V3dAmpToRsfcOutputs:
     """
@@ -237,6 +236,7 @@ def v_3d_amp_to_rsfc(
         in_pow: Input file of a one-sided power spectrum, such as output by\
             3dLombScargle.
         mask: Volume mask of voxels to include for calculations.
+        nifti: Output files as *.nii.gz (default is BRIK/HEAD).
         runner: Command runner.
     Returns:
         NamedTuple of outputs (described in `V3dAmpToRsfcOutputs`).
@@ -249,6 +249,7 @@ def v_3d_amp_to_rsfc(
         prefix=prefix,
         band=band,
         mask=mask,
+        nifti=nifti,
     )
     return v_3d_amp_to_rsfc_execute(params, execution)
 

niwrap_afni/afni/v_3d_anova3.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 V_3D_ANOVA3_METADATA = Metadata(
-    id="fe7391c6cb7a9865c9618e3aa5f2eb36c7ee57f4.boutiques",
+    id="89d3a37a3aeb7f4c6c360f1bc16bdccd1f3a7f46.boutiques",
     name="3dANOVA3",
     package="afni",
     container_image_tag="afni/afni_make_build:AFNI_24.2.06",
@@ -23,6 +23,28 @@ V3dAnova3Parameters = typing.TypedDict('V3dAnova3Parameters', {
     "voxel_num": typing.NotRequired[int | None],
     "diskspace": bool,
     "mask": typing.NotRequired[InputPathType | None],
+    "outfile_fa": typing.NotRequired[str | None],
+    "outfile_fb": typing.NotRequired[str | None],
+    "outfile_fc": typing.NotRequired[str | None],
+    "outfile_fab": typing.NotRequired[str | None],
+    "outfile_fac": typing.NotRequired[str | None],
+    "outfile_fbc": typing.NotRequired[str | None],
+    "outfile_fabc": typing.NotRequired[str | None],
+    "outfile_amean": typing.NotRequired[str | None],
+    "outfile_bmean": typing.NotRequired[str | None],
+    "outfile_cmean": typing.NotRequired[str | None],
+    "outfile_xmean": typing.NotRequired[str | None],
+    "outfile_adiff": typing.NotRequired[str | None],
+    "outfile_bdiff": typing.NotRequired[str | None],
+    "outfile_cdiff": typing.NotRequired[str | None],
+    "outfile_xdiff": typing.NotRequired[str | None],
+    "outfile_acontr": typing.NotRequired[str | None],
+    "outfile_bcontr": typing.NotRequired[str | None],
+    "outfile_ccontr": typing.NotRequired[str | None],
+    "outfile_Abcontr": typing.NotRequired[str | None],
+    "outfile_Abdiff": typing.NotRequired[str | None],
+    "outfile_abmean": typing.NotRequired[str | None],
+    "outfile_bucket": typing.NotRequired[str | None],
     "anova_options": typing.NotRequired[list[str] | None],
 })
 
@@ -65,23 +87,23 @@ class V3dAnova3Outputs(typing.NamedTuple):
     """
     root: OutputPathType
     """Output root folder. This is the root folder for all outputs."""
-    outfile_fa: OutputPathType
+    outfile_fa: OutputPathType | None
     """Output file for the main ANOVA result."""
-    outfile_fb: OutputPathType
+    outfile_fb: OutputPathType | None
     """Output file for the main B ANOVA result."""
-    outfile_fc: OutputPathType
+    outfile_fc: OutputPathType | None
     """Output file for the main C ANOVA result."""
-    outfile_fab: OutputPathType
+    outfile_fab: OutputPathType | None
     """Output file for the interaction between A and B."""
-    outfile_fac: OutputPathType
+    outfile_fac: OutputPathType | None
     """Output file for the interaction between A and C."""
-    outfile_fbc: OutputPathType
+    outfile_fbc: OutputPathType | None
     """Output file for the interaction between B and C."""
-    outfile_fabc: OutputPathType
+    outfile_fabc: OutputPathType | None
     """Output file for the interaction between A, B, and C."""
-    outfile_amean: OutputPathType
+    outfile_amean: OutputPathType | None
     """Output file for the A mean results."""
-    outfile_bmean: OutputPathType
+    outfile_bmean: OutputPathType | None
     """Output file for the B mean results."""
 
 
@@ -94,6 +116,28 @@ def v_3d_anova3_params(
     voxel_num: int | None = None,
     diskspace: bool = False,
     mask: InputPathType | None = None,
+    outfile_fa: str | None = None,
+    outfile_fb: str | None = None,
+    outfile_fc: str | None = None,
+    outfile_fab: str | None = None,
+    outfile_fac: str | None = None,
+    outfile_fbc: str | None = None,
+    outfile_fabc: str | None = None,
+    outfile_amean: str | None = None,
+    outfile_bmean: str | None = None,
+    outfile_cmean: str | None = None,
+    outfile_xmean: str | None = None,
+    outfile_adiff: str | None = None,
+    outfile_bdiff: str | None = None,
+    outfile_cdiff: str | None = None,
+    outfile_xdiff: str | None = None,
+    outfile_acontr: str | None = None,
+    outfile_bcontr: str | None = None,
+    outfile_ccontr: str | None = None,
+    outfile_abcontr: str | None = None,
+    outfile_abdiff: str | None = None,
+    outfile_abmean: str | None = None,
+    outfile_bucket: str | None = None,
     anova_options: list[str] | None = None,
 ) -> V3dAnova3Parameters:
     """
@@ -110,6 +154,37 @@ def v_3d_anova3_params(
         voxel_num: Screen output for specified voxel number.
         diskspace: Print out disk space required for program execution.
         mask: Use sub-brick #0 of dataset to define which voxels to process.
+        outfile_fa: Specify the output file for the main ANOVA result.
+        outfile_fb: Specify the output file for the main B ANOVA result.
+        outfile_fc: Specify the output file for the main C ANOVA result.
+        outfile_fab: Specify the output file for the interaction between A and\
+            B.
+        outfile_fac: Specify the output file for the interaction between A and\
+            C.
+        outfile_fbc: Specify the output file for the interaction between B and\
+            C.
+        outfile_fabc: Specify the output file for the interaction between A, B,\
+            and C.
+        outfile_amean: Specify the output file for the A mean results.
+        outfile_bmean: Specify the output file for the B mean results.
+        outfile_cmean: Specify the output file for the C mean results.
+        outfile_xmean: Specify the output file for the overall mean results.
+        outfile_adiff: Specify the output file for the A difference results.
+        outfile_bdiff: Specify the output file for the B difference results.
+        outfile_cdiff: Specify the output file for the C difference results.
+        outfile_xdiff: Specify the output file for the overall difference\
+            results.
+        outfile_acontr: Specify the output file for the A contrast results.
+        outfile_bcontr: Specify the output file for the B contrast results.
+        outfile_ccontr: Specify the output file for the C contrast results.
+        outfile_abcontr: Specify the output file for the interaction contrast\
+            results between A and B (case-sensitive).
+        outfile_abdiff: Specify the output file for the interaction difference\
+            results between A and B (case-sensitive).
+        outfile_abmean: Specify the output file for the mean results of the\
+            interaction between A and B.
+        outfile_bucket: Specify the output file for the bucket (combined)\
+            results.
         anova_options: Modified ANOVA computation options. See:\
             https://afni.nimh.nih.gov/sscc/gangc/ANOVA_Mod.html.
     Returns:
@@ -128,6 +203,50 @@ def v_3d_anova3_params(
         params["voxel_num"] = voxel_num
     if mask is not None:
         params["mask"] = mask
+    if outfile_fa is not None:
+        params["outfile_fa"] = outfile_fa
+    if outfile_fb is not None:
+        params["outfile_fb"] = outfile_fb
+    if outfile_fc is not None:
+        params["outfile_fc"] = outfile_fc
+    if outfile_fab is not None:
+        params["outfile_fab"] = outfile_fab
+    if outfile_fac is not None:
+        params["outfile_fac"] = outfile_fac
+    if outfile_fbc is not None:
+        params["outfile_fbc"] = outfile_fbc
+    if outfile_fabc is not None:
+        params["outfile_fabc"] = outfile_fabc
+    if outfile_amean is not None:
+        params["outfile_amean"] = outfile_amean
+    if outfile_bmean is not None:
+        params["outfile_bmean"] = outfile_bmean
+    if outfile_cmean is not None:
+        params["outfile_cmean"] = outfile_cmean
+    if outfile_xmean is not None:
+        params["outfile_xmean"] = outfile_xmean
+    if outfile_adiff is not None:
+        params["outfile_adiff"] = outfile_adiff
+    if outfile_bdiff is not None:
+        params["outfile_bdiff"] = outfile_bdiff
+    if outfile_cdiff is not None:
+        params["outfile_cdiff"] = outfile_cdiff
+    if outfile_xdiff is not None:
+        params["outfile_xdiff"] = outfile_xdiff
+    if outfile_acontr is not None:
+        params["outfile_acontr"] = outfile_acontr
+    if outfile_bcontr is not None:
+        params["outfile_bcontr"] = outfile_bcontr
+    if outfile_ccontr is not None:
+        params["outfile_ccontr"] = outfile_ccontr
+    if outfile_abcontr is not None:
+        params["outfile_Abcontr"] = outfile_abcontr
+    if outfile_abdiff is not None:
+        params["outfile_Abdiff"] = outfile_abdiff
+    if outfile_abmean is not None:
+        params["outfile_abmean"] = outfile_abmean
+    if outfile_bucket is not None:
+        params["outfile_bucket"] = outfile_bucket
     if anova_options is not None:
         params["anova_options"] = anova_options
     return params
@@ -180,7 +299,116 @@ def v_3d_anova3_cargs(
             "-mask",
             execution.input_file(params.get("mask"))
         ])
-    cargs.append("[OUTFILES]")
+    if params.get("outfile_fa") is not None:
+        cargs.extend([
+            "-fa",
+            params.get("outfile_fa")
+        ])
+    if params.get("outfile_fb") is not None:
+        cargs.extend([
+            "-fb",
+            params.get("outfile_fb")
+        ])
+    if params.get("outfile_fc") is not None:
+        cargs.extend([
+            "-fc",
+            params.get("outfile_fc")
+        ])
+    if params.get("outfile_fab") is not None:
+        cargs.extend([
+            "-fab",
+            params.get("outfile_fab")
+        ])
+    if params.get("outfile_fac") is not None:
+        cargs.extend([
+            "-fac",
+            params.get("outfile_fac")
+        ])
+    if params.get("outfile_fbc") is not None:
+        cargs.extend([
+            "-fbc",
+            params.get("outfile_fbc")
+        ])
+    if params.get("outfile_fabc") is not None:
+        cargs.extend([
+            "-fabc",
+            params.get("outfile_fabc")
+        ])
+    if params.get("outfile_amean") is not None:
+        cargs.extend([
+            "-amean",
+            params.get("outfile_amean")
+        ])
+    if params.get("outfile_bmean") is not None:
+        cargs.extend([
+            "-bmean",
+            params.get("outfile_bmean")
+        ])
+    if params.get("outfile_cmean") is not None:
+        cargs.extend([
+            "-cmean",
+            params.get("outfile_cmean")
+        ])
+    if params.get("outfile_xmean") is not None:
+        cargs.extend([
+            "-xmean",
+            params.get("outfile_xmean")
+        ])
+    if params.get("outfile_adiff") is not None:
+        cargs.extend([
+            "-adiff",
+            params.get("outfile_adiff")
+        ])
+    if params.get("outfile_bdiff") is not None:
+        cargs.extend([
+            "-bdiff",
+            params.get("outfile_bdiff")
+        ])
+    if params.get("outfile_cdiff") is not None:
+        cargs.extend([
+            "-cdiff",
+            params.get("outfile_cdiff")
+        ])
+    if params.get("outfile_xdiff") is not None:
+        cargs.extend([
+            "-xdiff",
+            params.get("outfile_xdiff")
+        ])
+    if params.get("outfile_acontr") is not None:
+        cargs.extend([
+            "-acontr",
+            params.get("outfile_acontr")
+        ])
+    if params.get("outfile_bcontr") is not None:
+        cargs.extend([
+            "-bcontr",
+            params.get("outfile_bcontr")
+        ])
+    if params.get("outfile_ccontr") is not None:
+        cargs.extend([
+            "-ccontr",
+            params.get("outfile_ccontr")
+        ])
+    if params.get("outfile_Abcontr") is not None:
+        cargs.extend([
+            "-Abcontr",
+            params.get("outfile_Abcontr")
+        ])
+    if params.get("outfile_Abdiff") is not None:
+        cargs.extend([
+            "-Abdiff",
+            params.get("outfile_Abdiff")
+        ])
+    if params.get("outfile_abmean") is not None:
+        cargs.extend([
+            "-abmean",
+            params.get("outfile_abmean")
+        ])
+    if params.get("outfile_bucket") is not None:
+        cargs.extend([
+            "-bucket",
+            params.get("outfile_bucket")
+        ])
     if params.get("anova_options") is not None:
         cargs.extend([
             "-old_method -OK -assume_sph",
@@ -204,15 +432,15 @@ def v_3d_anova3_outputs(
     """
     ret = V3dAnova3Outputs(
         root=execution.output_file("."),
-        outfile_fa=execution.output_file("[OUTFILE_FA]"),
-        outfile_fb=execution.output_file("[OUTFILE_FB]"),
-        outfile_fc=execution.output_file("[OUTFILE_FC]"),
-        outfile_fab=execution.output_file("[OUTFILE_FAB]"),
-        outfile_fac=execution.output_file("[OUTFILE_FAC]"),
-        outfile_fbc=execution.output_file("[OUTFILE_FBC]"),
-        outfile_fabc=execution.output_file("[OUTFILE_FABC]"),
-        outfile_amean=execution.output_file("[OUTFILE_AMEAN]"),
-        outfile_bmean=execution.output_file("[OUTFILE_BMEAN]"),
+        outfile_fa=execution.output_file(params.get("outfile_fa")) if (params.get("outfile_fa") is not None) else None,
+        outfile_fb=execution.output_file(params.get("outfile_fb")) if (params.get("outfile_fb") is not None) else None,
+        outfile_fc=execution.output_file(params.get("outfile_fc")) if (params.get("outfile_fc") is not None) else None,
+        outfile_fab=execution.output_file(params.get("outfile_fab")) if (params.get("outfile_fab") is not None) else None,
+        outfile_fac=execution.output_file(params.get("outfile_fac")) if (params.get("outfile_fac") is not None) else None,
+        outfile_fbc=execution.output_file(params.get("outfile_fbc")) if (params.get("outfile_fbc") is not None) else None,
+        outfile_fabc=execution.output_file(params.get("outfile_fabc")) if (params.get("outfile_fabc") is not None) else None,
+        outfile_amean=execution.output_file(params.get("outfile_amean")) if (params.get("outfile_amean") is not None) else None,
+        outfile_bmean=execution.output_file(params.get("outfile_bmean")) if (params.get("outfile_bmean") is not None) else None,
     )
     return ret
 
@@ -250,6 +478,28 @@ def v_3d_anova3(
     voxel_num: int | None = None,
     diskspace: bool = False,
     mask: InputPathType | None = None,
+    outfile_fa: str | None = None,
+    outfile_fb: str | None = None,
+    outfile_fc: str | None = None,
+    outfile_fab: str | None = None,
+    outfile_fac: str | None = None,
+    outfile_fbc: str | None = None,
+    outfile_fabc: str | None = None,
+    outfile_amean: str | None = None,
+    outfile_bmean: str | None = None,
+    outfile_cmean: str | None = None,
+    outfile_xmean: str | None = None,
+    outfile_adiff: str | None = None,
+    outfile_bdiff: str | None = None,
+    outfile_cdiff: str | None = None,
+    outfile_xdiff: str | None = None,
+    outfile_acontr: str | None = None,
+    outfile_bcontr: str | None = None,
+    outfile_ccontr: str | None = None,
+    outfile_abcontr: str | None = None,
+    outfile_abdiff: str | None = None,
+    outfile_abmean: str | None = None,
+    outfile_bucket: str | None = None,
     anova_options: list[str] | None = None,
     runner: Runner | None = None,
 ) -> V3dAnova3Outputs:
@@ -271,6 +521,37 @@ def v_3d_anova3(
         voxel_num: Screen output for specified voxel number.
         diskspace: Print out disk space required for program execution.
         mask: Use sub-brick #0 of dataset to define which voxels to process.
+        outfile_fa: Specify the output file for the main ANOVA result.
+        outfile_fb: Specify the output file for the main B ANOVA result.
+        outfile_fc: Specify the output file for the main C ANOVA result.
+        outfile_fab: Specify the output file for the interaction between A and\
+            B.
+        outfile_fac: Specify the output file for the interaction between A and\
+            C.
+        outfile_fbc: Specify the output file for the interaction between B and\
+            C.
+        outfile_fabc: Specify the output file for the interaction between A, B,\
+            and C.
+        outfile_amean: Specify the output file for the A mean results.
+        outfile_bmean: Specify the output file for the B mean results.
+        outfile_cmean: Specify the output file for the C mean results.
+        outfile_xmean: Specify the output file for the overall mean results.
+        outfile_adiff: Specify the output file for the A difference results.
+        outfile_bdiff: Specify the output file for the B difference results.
+        outfile_cdiff: Specify the output file for the C difference results.
+        outfile_xdiff: Specify the output file for the overall difference\
+            results.
+        outfile_acontr: Specify the output file for the A contrast results.
+        outfile_bcontr: Specify the output file for the B contrast results.
+        outfile_ccontr: Specify the output file for the C contrast results.
+        outfile_abcontr: Specify the output file for the interaction contrast\
+            results between A and B (case-sensitive).
+        outfile_abdiff: Specify the output file for the interaction difference\
+            results between A and B (case-sensitive).
+        outfile_abmean: Specify the output file for the mean results of the\
+            interaction between A and B.
+        outfile_bucket: Specify the output file for the bucket (combined)\
+            results.
         anova_options: Modified ANOVA computation options. See:\
             https://afni.nimh.nih.gov/sscc/gangc/ANOVA_Mod.html.
         runner: Command runner.
@@ -288,6 +569,28 @@ def v_3d_anova3(
         voxel_num=voxel_num,
         diskspace=diskspace,
         mask=mask,
+        outfile_fa=outfile_fa,
+        outfile_fb=outfile_fb,
+        outfile_fc=outfile_fc,
+        outfile_fab=outfile_fab,
+        outfile_fac=outfile_fac,
+        outfile_fbc=outfile_fbc,
+        outfile_fabc=outfile_fabc,
+        outfile_amean=outfile_amean,
+        outfile_bmean=outfile_bmean,
+        outfile_cmean=outfile_cmean,
+        outfile_xmean=outfile_xmean,
+        outfile_adiff=outfile_adiff,
+        outfile_bdiff=outfile_bdiff,
+        outfile_cdiff=outfile_cdiff,
+        outfile_xdiff=outfile_xdiff,
+        outfile_acontr=outfile_acontr,
+        outfile_bcontr=outfile_bcontr,
+        outfile_ccontr=outfile_ccontr,
+        outfile_abcontr=outfile_abcontr,
+        outfile_abdiff=outfile_abdiff,
+        outfile_abmean=outfile_abmean,
+        outfile_bucket=outfile_bucket,
         anova_options=anova_options,
     )
     return v_3d_anova3_execute(params, execution)