neuro-sam 0.1.0__py3-none-any.whl

sam2/modeling/sam/transformer.py

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+# Copyright (c) Meta Platforms, Inc. and affiliates.
+# All rights reserved.
+
+# This source code is licensed under the license found in the
+# LICENSE file in the root directory of this source tree.
+
+import math
+from functools import partial
+from typing import Tuple, Type
+
+import torch
+import torch.nn.functional as F
+from torch import nn, Tensor
+
+from sam2.modeling.position_encoding import apply_rotary_enc, compute_axial_cis
+from sam2.modeling.sam2_utils import MLP
+
+
+class TwoWayTransformer(nn.Module):
+    def __init__(
+        self,
+        depth: int,
+        embedding_dim: int,
+        num_heads: int,
+        mlp_dim: int,
+        activation: Type[nn.Module] = nn.ReLU,
+        attention_downsample_rate: int = 2,
+    ) -> None:
+        """
+        A transformer decoder that attends to an input image using
+        queries whose positional embedding is supplied.
+
+        Args:
+          depth (int): number of layers in the transformer
+          embedding_dim (int): the channel dimension for the input embeddings
+          num_heads (int): the number of heads for multihead attention. Must
+            divide embedding_dim
+          mlp_dim (int): the channel dimension internal to the MLP block
+          activation (nn.Module): the activation to use in the MLP block
+        """
+        super().__init__()
+        self.depth = depth
+        self.embedding_dim = embedding_dim
+        self.num_heads = num_heads
+        self.mlp_dim = mlp_dim
+        self.layers = nn.ModuleList()
+
+        for i in range(depth):
+            self.layers.append(
+                TwoWayAttentionBlock(
+                    embedding_dim=embedding_dim,
+                    num_heads=num_heads,
+                    mlp_dim=mlp_dim,
+                    activation=activation,
+                    attention_downsample_rate=attention_downsample_rate,
+                    skip_first_layer_pe=(i == 0),
+                )
+            )
+
+        self.final_attn_token_to_image = Attention(
+            embedding_dim, num_heads, downsample_rate=attention_downsample_rate
+        )
+        self.norm_final_attn = nn.LayerNorm(embedding_dim)
+
+    def forward(
+        self,
+        image_embedding: Tensor,
+        image_pe: Tensor,
+        point_embedding: Tensor,
+    ) -> Tuple[Tensor, Tensor]:
+        """
+        Args:
+          image_embedding (torch.Tensor): image to attend to. Should be shape
+            B x embedding_dim x h x w for any h and w.
+          image_pe (torch.Tensor): the positional encoding to add to the image. Must
+            have the same shape as image_embedding.
+          point_embedding (torch.Tensor): the embedding to add to the query points.
+            Must have shape B x N_points x embedding_dim for any N_points.
+
+        Returns:
+          torch.Tensor: the processed point_embedding
+          torch.Tensor: the processed image_embedding
+        """
+        # BxCxHxW -> BxHWxC == B x N_image_tokens x C
+        bs, c, h, w = image_embedding.shape
+        image_embedding = image_embedding.flatten(2).permute(0, 2, 1)
+        image_pe = image_pe.flatten(2).permute(0, 2, 1)
+
+        # Prepare queries
+        queries = point_embedding
+        keys = image_embedding
+
+        # Apply transformer blocks and final layernorm
+        for layer in self.layers:
+            queries, keys = layer(
+                queries=queries,
+                keys=keys,
+                query_pe=point_embedding,
+                key_pe=image_pe,
+            )
+
+        # Apply the final attention layer from the points to the image
+        q = queries + point_embedding
+        k = keys + image_pe
+        attn_out = self.final_attn_token_to_image(q=q, k=k, v=keys)
+        queries = queries + attn_out
+        queries = self.norm_final_attn(queries)
+
+        return queries, keys
+
+
+class TwoWayAttentionBlock(nn.Module):
+    def __init__(
+        self,
+        embedding_dim: int,
+        num_heads: int,
+        mlp_dim: int = 2048,
+        activation: Type[nn.Module] = nn.ReLU,
+        attention_downsample_rate: int = 2,
+        skip_first_layer_pe: bool = False,
+    ) -> None:
+        """
+        A transformer block with four layers: (1) self-attention of sparse
+        inputs, (2) cross attention of sparse inputs to dense inputs, (3) mlp
+        block on sparse inputs, and (4) cross attention of dense inputs to sparse
+        inputs.
+
+        Arguments:
+          embedding_dim (int): the channel dimension of the embeddings
+          num_heads (int): the number of heads in the attention layers
+          mlp_dim (int): the hidden dimension of the mlp block
+          activation (nn.Module): the activation of the mlp block
+          skip_first_layer_pe (bool): skip the PE on the first layer
+        """
+        super().__init__()
+        self.self_attn = Attention(embedding_dim, num_heads)
+        self.norm1 = nn.LayerNorm(embedding_dim)
+
+        self.cross_attn_token_to_image = Attention(
+            embedding_dim, num_heads, downsample_rate=attention_downsample_rate
+        )
+        self.norm2 = nn.LayerNorm(embedding_dim)
+
+        self.mlp = MLP(
+            embedding_dim, mlp_dim, embedding_dim, num_layers=2, activation=activation
+        )
+        self.norm3 = nn.LayerNorm(embedding_dim)
+
+        self.norm4 = nn.LayerNorm(embedding_dim)
+        self.cross_attn_image_to_token = Attention(
+            embedding_dim, num_heads, downsample_rate=attention_downsample_rate
+        )
+
+        self.skip_first_layer_pe = skip_first_layer_pe
+
+    def forward(
+        self, queries: Tensor, keys: Tensor, query_pe: Tensor, key_pe: Tensor
+    ) -> Tuple[Tensor, Tensor]:
+        # Self attention block
+        if self.skip_first_layer_pe:
+            queries = self.self_attn(q=queries, k=queries, v=queries)
+        else:
+            q = queries + query_pe
+            attn_out = self.self_attn(q=q, k=q, v=queries)
+            queries = queries + attn_out
+        queries = self.norm1(queries)
+
+        # Cross attention block, tokens attending to image embedding
+        q = queries + query_pe
+        k = keys + key_pe
+        attn_out = self.cross_attn_token_to_image(q=q, k=k, v=keys)
+        queries = queries + attn_out
+        queries = self.norm2(queries)
+
+        # MLP block
+        mlp_out = self.mlp(queries)
+        queries = queries + mlp_out
+        queries = self.norm3(queries)
+
+        # Cross attention block, image embedding attending to tokens
+        q = queries + query_pe
+        k = keys + key_pe
+        attn_out = self.cross_attn_image_to_token(q=k, k=q, v=queries)
+        keys = keys + attn_out
+        keys = self.norm4(keys)
+
+        return queries, keys
+
+
+class Attention(nn.Module):
+    """
+    An attention layer that allows for downscaling the size of the embedding
+    after projection to queries, keys, and values.
+    """
+
+    def __init__(
+        self,
+        embedding_dim: int,
+        num_heads: int,
+        downsample_rate: int = 1,
+        dropout: float = 0.0,
+        kv_in_dim: int = None,
+    ) -> None:
+        super().__init__()
+        self.embedding_dim = embedding_dim
+        self.kv_in_dim = kv_in_dim if kv_in_dim is not None else embedding_dim
+        self.internal_dim = embedding_dim // downsample_rate
+        self.num_heads = num_heads
+        assert (
+            self.internal_dim % num_heads == 0
+        ), "num_heads must divide embedding_dim."
+
+        self.q_proj = nn.Linear(embedding_dim, self.internal_dim)
+        self.k_proj = nn.Linear(self.kv_in_dim, self.internal_dim)
+        self.v_proj = nn.Linear(self.kv_in_dim, self.internal_dim)
+        self.out_proj = nn.Linear(self.internal_dim, embedding_dim)
+
+        self.dropout_p = dropout
+
+    def _separate_heads(self, x: Tensor, num_heads: int) -> Tensor:
+        b, n, c = x.shape
+        x = x.reshape(b, n, num_heads, c // num_heads)
+        return x.transpose(1, 2)  # B x N_heads x N_tokens x C_per_head
+
+    def _recombine_heads(self, x: Tensor) -> Tensor:
+        b, n_heads, n_tokens, c_per_head = x.shape
+        x = x.transpose(1, 2)
+        return x.reshape(b, n_tokens, n_heads * c_per_head)  # B x N_tokens x C
+
+    def forward(self, q: Tensor, k: Tensor, v: Tensor) -> Tensor:
+        # Input projections
+        q = self.q_proj(q)
+        k = self.k_proj(k)
+        v = self.v_proj(v)
+
+        # Separate into heads
+        q = self._separate_heads(q, self.num_heads)
+        k = self._separate_heads(k, self.num_heads)
+        v = self._separate_heads(v, self.num_heads)
+
+        dropout_p = self.dropout_p if self.training else 0.0
+        # Attention
+        out = F.scaled_dot_product_attention(q, k, v, dropout_p=dropout_p)
+
+        out = self._recombine_heads(out)
+        out = self.out_proj(out)
+
+        return out
+
+
+class RoPEAttention(Attention):
+    """Attention with rotary position encoding."""
+
+    def __init__(
+        self,
+        *args,
+        rope_theta=10000.0,
+        # whether to repeat q rope to match k length
+        # this is needed for cross-attention to memories
+        rope_k_repeat=False,
+        feat_sizes=(64, 64),  # [w, h] for stride 16 feats at 1024 resolution
+        **kwargs,
+    ):
+        super().__init__(*args, **kwargs)
+
+        self.compute_cis = partial(
+            compute_axial_cis, dim=self.internal_dim // self.num_heads, theta=rope_theta
+        )
+        freqs_cis = self.compute_cis(end_x=feat_sizes[0], end_y=feat_sizes[1])
+        self.freqs_cis = (
+            freqs_cis.to("cuda") if torch.cuda.is_available() else freqs_cis
+        )
+        self.rope_k_repeat = rope_k_repeat
+
+    def forward(
+        self, q: Tensor, k: Tensor, v: Tensor, num_k_exclude_rope: int = 0
+    ) -> Tensor:
+        # Input projections
+        q = self.q_proj(q)
+        k = self.k_proj(k)
+        v = self.v_proj(v)
+
+        # Separate into heads
+        q = self._separate_heads(q, self.num_heads)
+        k = self._separate_heads(k, self.num_heads)
+        v = self._separate_heads(v, self.num_heads)
+
+        # Apply rotary position encoding
+        w = h = math.sqrt(q.shape[-2])
+        self.freqs_cis = self.freqs_cis.to(q.device)
+        if self.freqs_cis.shape[0] != q.shape[-2]:
+            self.freqs_cis = self.compute_cis(end_x=w, end_y=h).to(q.device)
+        if q.shape[-2] != k.shape[-2]:
+            assert self.rope_k_repeat
+
+        num_k_rope = k.size(-2) - num_k_exclude_rope
+        q, k[:, :, :num_k_rope] = apply_rotary_enc(
+            q,
+            k[:, :, :num_k_rope],
+            freqs_cis=self.freqs_cis,
+            repeat_freqs_k=self.rope_k_repeat,
+        )
+
+        dropout_p = self.dropout_p if self.training else 0.0
+        # Attention
+        out = F.scaled_dot_product_attention(q, k, v, dropout_p=dropout_p)
+
+        out = self._recombine_heads(out)
+        out = self.out_proj(out)
+
+        return out