ncbi-datasets-pyclient 18.14.0__py3-none-any.whl → 18.16.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (24) hide show
  1. ncbi/datasets/openapi/__init__.py +23 -1
  2. ncbi/datasets/openapi/api/organelle_api.py +24 -24
  3. ncbi/datasets/openapi/api/virus_api.py +132 -132
  4. ncbi/datasets/openapi/api_client.py +1 -1
  5. ncbi/datasets/openapi/configuration.py +1 -1
  6. ncbi/datasets/openapi/models/__init__.py +11 -0
  7. ncbi/datasets/openapi/models/ncbigsupgcolv2_assembly_accessions_reply.py +87 -0
  8. ncbi/datasets/openapi/models/ncbigsupgcolv2_assembly_check_m_histogram_request.py +87 -0
  9. ncbi/datasets/openapi/models/ncbigsupgcolv2_assembly_data_report_draft_request.py +89 -0
  10. ncbi/datasets/openapi/models/ncbigsupgcolv2_assembly_data_reports_request.py +87 -0
  11. ncbi/datasets/openapi/models/ncbigsupgcolv2_chromosome_location.py +54 -0
  12. ncbi/datasets/openapi/models/ncbigsupgcolv2_chromosome_type.py +42 -0
  13. ncbi/datasets/openapi/models/ncbigsupgcolv2_sequence_accession_request.py +87 -0
  14. ncbi/datasets/openapi/models/ncbiprotddv2_parsed_abstract.py +107 -0
  15. ncbi/datasets/openapi/models/ncbiprotddv2_parsed_abstract_author.py +89 -0
  16. ncbi/datasets/openapi/models/ncbiprotddv2_parsed_abstract_epub.py +93 -0
  17. ncbi/datasets/openapi/models/ncbiprotddv2_pubmed_abstract_request.py +87 -0
  18. ncbi/datasets/openapi/models/ncbiprotddv2_redundancy_level.py +1 -0
  19. ncbi/datasets/openapi/models/ncbiprotddv2_similar_structure_request.py +2 -2
  20. {ncbi_datasets_pyclient-18.14.0.dist-info → ncbi_datasets_pyclient-18.16.0.dist-info}/METADATA +14 -3
  21. {ncbi_datasets_pyclient-18.14.0.dist-info → ncbi_datasets_pyclient-18.16.0.dist-info}/RECORD +24 -13
  22. {ncbi_datasets_pyclient-18.14.0.dist-info → ncbi_datasets_pyclient-18.16.0.dist-info}/WHEEL +1 -1
  23. {ncbi_datasets_pyclient-18.14.0.dist-info → ncbi_datasets_pyclient-18.16.0.dist-info}/licenses/LICENSE +0 -0
  24. {ncbi_datasets_pyclient-18.14.0.dist-info → ncbi_datasets_pyclient-18.16.0.dist-info}/top_level.txt +0 -0
ncbi/datasets/openapi/api/virus_api.py CHANGED
@@ -60,8 +60,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -93,9 +93,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -175,8 +175,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -208,9 +208,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -290,8 +290,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -323,9 +323,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -839,8 +839,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -871,9 +871,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -950,8 +950,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -982,9 +982,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -1061,8 +1061,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -1093,9 +1093,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -1584,8 +1584,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -1616,9 +1616,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -1695,8 +1695,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -1727,9 +1727,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -1806,8 +1806,8 @@ class VirusApi:
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  proteins: Annotated[List[StrictStr], Field(description="One or more SARS-CoV-2 protein names")],
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  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
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  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
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- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ released_since: Optional[datetime] = None,
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+ updated_since: Optional[datetime] = None,
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  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes with the specified Pango lineage.")] = None,
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  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -1838,9 +1838,9 @@ class VirusApi:
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  :type refseq_only: bool
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  :param annotated_only: If true, limit results to annotated genomes.
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  :type annotated_only: bool
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- :param released_since: Limit to genomes released on or after the specified date.
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+ :param released_since:
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  :type released_since: datetime
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- :param updated_since: Limit to genomes updated on or after the specified date.
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+ :param updated_since:
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  :type updated_since: datetime
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  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type host: str
@@ -2591,8 +2591,8 @@ class VirusApi:
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  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
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  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
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  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
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- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ filter_released_since: Optional[datetime] = None,
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+ filter_updated_since: Optional[datetime] = None,
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  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
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  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -2624,9 +2624,9 @@ class VirusApi:
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  :type filter_refseq_only: bool
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  :param filter_annotated_only: If true, limit to annotated genomes.
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  :type filter_annotated_only: bool
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- :param filter_released_since: Limit to genomes released on or after the specified date.
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+ :param filter_released_since:
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  :type filter_released_since: datetime
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- :param filter_updated_since: Limit to genomes updated on or after the specified date.
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+ :param filter_updated_since:
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  :type filter_updated_since: datetime
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  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type filter_host: str
@@ -2706,8 +2706,8 @@ class VirusApi:
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  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
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  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
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  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
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- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
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- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
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+ filter_released_since: Optional[datetime] = None,
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+ filter_updated_since: Optional[datetime] = None,
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  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
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  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
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  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -2739,9 +2739,9 @@ class VirusApi:
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  :type filter_refseq_only: bool
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  :param filter_annotated_only: If true, limit to annotated genomes.
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  :type filter_annotated_only: bool
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- :param filter_released_since: Limit to genomes released on or after the specified date.
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+ :param filter_released_since:
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  :type filter_released_since: datetime
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- :param filter_updated_since: Limit to genomes updated on or after the specified date.
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+ :param filter_updated_since:
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  :type filter_updated_since: datetime
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  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
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  :type filter_host: str
@@ -2821,8 +2821,8 @@ class VirusApi:
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  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
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  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
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  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
2824
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
2825
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
2824
+ filter_released_since: Optional[datetime] = None,
2825
+ filter_updated_since: Optional[datetime] = None,
2826
2826
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
2827
2827
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
2828
2828
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -2854,9 +2854,9 @@ class VirusApi:
2854
2854
  :type filter_refseq_only: bool
2855
2855
  :param filter_annotated_only: If true, limit to annotated genomes.
2856
2856
  :type filter_annotated_only: bool
2857
- :param filter_released_since: Limit to genomes released on or after the specified date.
2857
+ :param filter_released_since:
2858
2858
  :type filter_released_since: datetime
2859
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
2859
+ :param filter_updated_since:
2860
2860
  :type filter_updated_since: datetime
2861
2861
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
2862
2862
  :type filter_host: str
@@ -3356,8 +3356,8 @@ class VirusApi:
3356
3356
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
3357
3357
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
3358
3358
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
3359
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
3360
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
3359
+ filter_released_since: Optional[datetime] = None,
3360
+ filter_updated_since: Optional[datetime] = None,
3361
3361
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
3362
3362
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
3363
3363
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -3389,9 +3389,9 @@ class VirusApi:
3389
3389
  :type filter_refseq_only: bool
3390
3390
  :param filter_annotated_only: If true, limit to annotated genomes.
3391
3391
  :type filter_annotated_only: bool
3392
- :param filter_released_since: Limit to genomes released on or after the specified date.
3392
+ :param filter_released_since:
3393
3393
  :type filter_released_since: datetime
3394
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
3394
+ :param filter_updated_since:
3395
3395
  :type filter_updated_since: datetime
3396
3396
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
3397
3397
  :type filter_host: str
@@ -3471,8 +3471,8 @@ class VirusApi:
3471
3471
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
3472
3472
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
3473
3473
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
3474
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
3475
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
3474
+ filter_released_since: Optional[datetime] = None,
3475
+ filter_updated_since: Optional[datetime] = None,
3476
3476
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
3477
3477
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
3478
3478
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -3504,9 +3504,9 @@ class VirusApi:
3504
3504
  :type filter_refseq_only: bool
3505
3505
  :param filter_annotated_only: If true, limit to annotated genomes.
3506
3506
  :type filter_annotated_only: bool
3507
- :param filter_released_since: Limit to genomes released on or after the specified date.
3507
+ :param filter_released_since:
3508
3508
  :type filter_released_since: datetime
3509
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
3509
+ :param filter_updated_since:
3510
3510
  :type filter_updated_since: datetime
3511
3511
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
3512
3512
  :type filter_host: str
@@ -3586,8 +3586,8 @@ class VirusApi:
3586
3586
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
3587
3587
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit to RefSeq genomes.")] = None,
3588
3588
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit to annotated genomes.")] = None,
3589
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
3590
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
3589
+ filter_released_since: Optional[datetime] = None,
3590
+ filter_updated_since: Optional[datetime] = None,
3591
3591
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
3592
3592
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
3593
3593
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specififed geographic location.")] = None,
@@ -3619,9 +3619,9 @@ class VirusApi:
3619
3619
  :type filter_refseq_only: bool
3620
3620
  :param filter_annotated_only: If true, limit to annotated genomes.
3621
3621
  :type filter_annotated_only: bool
3622
- :param filter_released_since: Limit to genomes released on or after the specified date.
3622
+ :param filter_released_since:
3623
3623
  :type filter_released_since: datetime
3624
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
3624
+ :param filter_updated_since:
3625
3625
  :type filter_updated_since: datetime
3626
3626
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
3627
3627
  :type filter_host: str
@@ -3843,8 +3843,8 @@ class VirusApi:
3843
3843
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
3844
3844
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
3845
3845
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
3846
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
3847
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
3846
+ released_since: Optional[datetime] = None,
3847
+ updated_since: Optional[datetime] = None,
3848
3848
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
3849
3849
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
3850
3850
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -3877,9 +3877,9 @@ class VirusApi:
3877
3877
  :type refseq_only: bool
3878
3878
  :param annotated_only: If true, limit results to annotated genomes.
3879
3879
  :type annotated_only: bool
3880
- :param released_since: Limit to genomes released on or after the specified date.
3880
+ :param released_since:
3881
3881
  :type released_since: datetime
3882
- :param updated_since: Limit to genomes updated on or after the specified date.
3882
+ :param updated_since:
3883
3883
  :type updated_since: datetime
3884
3884
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
3885
3885
  :type host: str
@@ -3962,8 +3962,8 @@ class VirusApi:
3962
3962
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
3963
3963
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
3964
3964
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
3965
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
3966
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
3965
+ released_since: Optional[datetime] = None,
3966
+ updated_since: Optional[datetime] = None,
3967
3967
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
3968
3968
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
3969
3969
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -3996,9 +3996,9 @@ class VirusApi:
3996
3996
  :type refseq_only: bool
3997
3997
  :param annotated_only: If true, limit results to annotated genomes.
3998
3998
  :type annotated_only: bool
3999
- :param released_since: Limit to genomes released on or after the specified date.
3999
+ :param released_since:
4000
4000
  :type released_since: datetime
4001
- :param updated_since: Limit to genomes updated on or after the specified date.
4001
+ :param updated_since:
4002
4002
  :type updated_since: datetime
4003
4003
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
4004
4004
  :type host: str
@@ -4081,8 +4081,8 @@ class VirusApi:
4081
4081
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
4082
4082
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
4083
4083
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
4084
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
4085
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
4084
+ released_since: Optional[datetime] = None,
4085
+ updated_since: Optional[datetime] = None,
4086
4086
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
4087
4087
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
4088
4088
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -4115,9 +4115,9 @@ class VirusApi:
4115
4115
  :type refseq_only: bool
4116
4116
  :param annotated_only: If true, limit results to annotated genomes.
4117
4117
  :type annotated_only: bool
4118
- :param released_since: Limit to genomes released on or after the specified date.
4118
+ :param released_since:
4119
4119
  :type released_since: datetime
4120
- :param updated_since: Limit to genomes updated on or after the specified date.
4120
+ :param updated_since:
4121
4121
  :type updated_since: datetime
4122
4122
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
4123
4123
  :type host: str
@@ -4347,8 +4347,8 @@ class VirusApi:
4347
4347
  taxons: Annotated[Optional[List[StrictStr]], Field(description="NCBI Taxonomy IDs or names (common or scientific) at any taxonomic rank")] = None,
4348
4348
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
4349
4349
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
4350
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
4351
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
4350
+ released_since: Optional[datetime] = None,
4351
+ updated_since: Optional[datetime] = None,
4352
4352
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
4353
4353
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
4354
4354
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -4383,9 +4383,9 @@ class VirusApi:
4383
4383
  :type refseq_only: bool
4384
4384
  :param annotated_only: If true, limit results to annotated genomes.
4385
4385
  :type annotated_only: bool
4386
- :param released_since: Limit to genomes released on or after the specified date.
4386
+ :param released_since:
4387
4387
  :type released_since: datetime
4388
- :param updated_since: Limit to genomes updated on or after the specified date.
4388
+ :param updated_since:
4389
4389
  :type updated_since: datetime
4390
4390
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
4391
4391
  :type host: str
@@ -4470,8 +4470,8 @@ class VirusApi:
4470
4470
  taxons: Annotated[Optional[List[StrictStr]], Field(description="NCBI Taxonomy IDs or names (common or scientific) at any taxonomic rank")] = None,
4471
4471
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
4472
4472
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
4473
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
4474
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
4473
+ released_since: Optional[datetime] = None,
4474
+ updated_since: Optional[datetime] = None,
4475
4475
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
4476
4476
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
4477
4477
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -4506,9 +4506,9 @@ class VirusApi:
4506
4506
  :type refseq_only: bool
4507
4507
  :param annotated_only: If true, limit results to annotated genomes.
4508
4508
  :type annotated_only: bool
4509
- :param released_since: Limit to genomes released on or after the specified date.
4509
+ :param released_since:
4510
4510
  :type released_since: datetime
4511
- :param updated_since: Limit to genomes updated on or after the specified date.
4511
+ :param updated_since:
4512
4512
  :type updated_since: datetime
4513
4513
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
4514
4514
  :type host: str
@@ -4593,8 +4593,8 @@ class VirusApi:
4593
4593
  taxons: Annotated[Optional[List[StrictStr]], Field(description="NCBI Taxonomy IDs or names (common or scientific) at any taxonomic rank")] = None,
4594
4594
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
4595
4595
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
4596
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
4597
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
4596
+ released_since: Optional[datetime] = None,
4597
+ updated_since: Optional[datetime] = None,
4598
4598
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
4599
4599
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
4600
4600
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -4629,9 +4629,9 @@ class VirusApi:
4629
4629
  :type refseq_only: bool
4630
4630
  :param annotated_only: If true, limit results to annotated genomes.
4631
4631
  :type annotated_only: bool
4632
- :param released_since: Limit to genomes released on or after the specified date.
4632
+ :param released_since:
4633
4633
  :type released_since: datetime
4634
- :param updated_since: Limit to genomes updated on or after the specified date.
4634
+ :param updated_since:
4635
4635
  :type updated_since: datetime
4636
4636
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
4637
4637
  :type host: str
@@ -5161,8 +5161,8 @@ class VirusApi:
5161
5161
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
5162
5162
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
5163
5163
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
5164
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
5165
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
5164
+ released_since: Optional[datetime] = None,
5165
+ updated_since: Optional[datetime] = None,
5166
5166
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
5167
5167
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
5168
5168
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -5195,9 +5195,9 @@ class VirusApi:
5195
5195
  :type refseq_only: bool
5196
5196
  :param annotated_only: If true, limit results to annotated genomes.
5197
5197
  :type annotated_only: bool
5198
- :param released_since: Limit to genomes released on or after the specified date.
5198
+ :param released_since:
5199
5199
  :type released_since: datetime
5200
- :param updated_since: Limit to genomes updated on or after the specified date.
5200
+ :param updated_since:
5201
5201
  :type updated_since: datetime
5202
5202
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
5203
5203
  :type host: str
@@ -5276,8 +5276,8 @@ class VirusApi:
5276
5276
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
5277
5277
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
5278
5278
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
5279
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
5280
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
5279
+ released_since: Optional[datetime] = None,
5280
+ updated_since: Optional[datetime] = None,
5281
5281
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
5282
5282
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
5283
5283
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -5310,9 +5310,9 @@ class VirusApi:
5310
5310
  :type refseq_only: bool
5311
5311
  :param annotated_only: If true, limit results to annotated genomes.
5312
5312
  :type annotated_only: bool
5313
- :param released_since: Limit to genomes released on or after the specified date.
5313
+ :param released_since:
5314
5314
  :type released_since: datetime
5315
- :param updated_since: Limit to genomes updated on or after the specified date.
5315
+ :param updated_since:
5316
5316
  :type updated_since: datetime
5317
5317
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
5318
5318
  :type host: str
@@ -5391,8 +5391,8 @@ class VirusApi:
5391
5391
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
5392
5392
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
5393
5393
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
5394
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
5395
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
5394
+ released_since: Optional[datetime] = None,
5395
+ updated_since: Optional[datetime] = None,
5396
5396
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
5397
5397
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
5398
5398
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -5425,9 +5425,9 @@ class VirusApi:
5425
5425
  :type refseq_only: bool
5426
5426
  :param annotated_only: If true, limit results to annotated genomes.
5427
5427
  :type annotated_only: bool
5428
- :param released_since: Limit to genomes released on or after the specified date.
5428
+ :param released_since:
5429
5429
  :type released_since: datetime
5430
- :param updated_since: Limit to genomes updated on or after the specified date.
5430
+ :param updated_since:
5431
5431
  :type updated_since: datetime
5432
5432
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
5433
5433
  :type host: str
@@ -5923,8 +5923,8 @@ class VirusApi:
5923
5923
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
5924
5924
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
5925
5925
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
5926
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
5927
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
5926
+ released_since: Optional[datetime] = None,
5927
+ updated_since: Optional[datetime] = None,
5928
5928
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
5929
5929
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
5930
5930
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -5959,9 +5959,9 @@ class VirusApi:
5959
5959
  :type refseq_only: bool
5960
5960
  :param annotated_only: If true, limit results to annotated genomes.
5961
5961
  :type annotated_only: bool
5962
- :param released_since: Limit to genomes released on or after the specified date.
5962
+ :param released_since:
5963
5963
  :type released_since: datetime
5964
- :param updated_since: Limit to genomes updated on or after the specified date.
5964
+ :param updated_since:
5965
5965
  :type updated_since: datetime
5966
5966
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
5967
5967
  :type host: str
@@ -6046,8 +6046,8 @@ class VirusApi:
6046
6046
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
6047
6047
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
6048
6048
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
6049
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
6050
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
6049
+ released_since: Optional[datetime] = None,
6050
+ updated_since: Optional[datetime] = None,
6051
6051
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
6052
6052
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
6053
6053
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -6082,9 +6082,9 @@ class VirusApi:
6082
6082
  :type refseq_only: bool
6083
6083
  :param annotated_only: If true, limit results to annotated genomes.
6084
6084
  :type annotated_only: bool
6085
- :param released_since: Limit to genomes released on or after the specified date.
6085
+ :param released_since:
6086
6086
  :type released_since: datetime
6087
- :param updated_since: Limit to genomes updated on or after the specified date.
6087
+ :param updated_since:
6088
6088
  :type updated_since: datetime
6089
6089
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
6090
6090
  :type host: str
@@ -6169,8 +6169,8 @@ class VirusApi:
6169
6169
  accessions: Annotated[Optional[List[StrictStr]], Field(description="One or more nucleotide sequence accessions")] = None,
6170
6170
  refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
6171
6171
  annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
6172
- released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
6173
- updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
6172
+ released_since: Optional[datetime] = None,
6173
+ updated_since: Optional[datetime] = None,
6174
6174
  host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
6175
6175
  pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
6176
6176
  geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -6205,9 +6205,9 @@ class VirusApi:
6205
6205
  :type refseq_only: bool
6206
6206
  :param annotated_only: If true, limit results to annotated genomes.
6207
6207
  :type annotated_only: bool
6208
- :param released_since: Limit to genomes released on or after the specified date.
6208
+ :param released_since:
6209
6209
  :type released_since: datetime
6210
- :param updated_since: Limit to genomes updated on or after the specified date.
6210
+ :param updated_since:
6211
6211
  :type updated_since: datetime
6212
6212
  :param host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
6213
6213
  :type host: str
@@ -6444,8 +6444,8 @@ class VirusApi:
6444
6444
  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
6445
6445
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
6446
6446
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
6447
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
6448
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
6447
+ filter_released_since: Optional[datetime] = None,
6448
+ filter_updated_since: Optional[datetime] = None,
6449
6449
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
6450
6450
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
6451
6451
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -6478,9 +6478,9 @@ class VirusApi:
6478
6478
  :type filter_refseq_only: bool
6479
6479
  :param filter_annotated_only: If true, limit results to annotated genomes.
6480
6480
  :type filter_annotated_only: bool
6481
- :param filter_released_since: Limit to genomes released on or after the specified date.
6481
+ :param filter_released_since:
6482
6482
  :type filter_released_since: datetime
6483
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
6483
+ :param filter_updated_since:
6484
6484
  :type filter_updated_since: datetime
6485
6485
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
6486
6486
  :type filter_host: str
@@ -6563,8 +6563,8 @@ class VirusApi:
6563
6563
  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
6564
6564
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
6565
6565
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
6566
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
6567
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
6566
+ filter_released_since: Optional[datetime] = None,
6567
+ filter_updated_since: Optional[datetime] = None,
6568
6568
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
6569
6569
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
6570
6570
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -6597,9 +6597,9 @@ class VirusApi:
6597
6597
  :type filter_refseq_only: bool
6598
6598
  :param filter_annotated_only: If true, limit results to annotated genomes.
6599
6599
  :type filter_annotated_only: bool
6600
- :param filter_released_since: Limit to genomes released on or after the specified date.
6600
+ :param filter_released_since:
6601
6601
  :type filter_released_since: datetime
6602
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
6602
+ :param filter_updated_since:
6603
6603
  :type filter_updated_since: datetime
6604
6604
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
6605
6605
  :type filter_host: str
@@ -6682,8 +6682,8 @@ class VirusApi:
6682
6682
  accessions: Annotated[List[StrictStr], Field(description="One or more nucleotide sequence accessions")],
6683
6683
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
6684
6684
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
6685
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
6686
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
6685
+ filter_released_since: Optional[datetime] = None,
6686
+ filter_updated_since: Optional[datetime] = None,
6687
6687
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
6688
6688
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
6689
6689
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -6716,9 +6716,9 @@ class VirusApi:
6716
6716
  :type filter_refseq_only: bool
6717
6717
  :param filter_annotated_only: If true, limit results to annotated genomes.
6718
6718
  :type filter_annotated_only: bool
6719
- :param filter_released_since: Limit to genomes released on or after the specified date.
6719
+ :param filter_released_since:
6720
6720
  :type filter_released_since: datetime
6721
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
6721
+ :param filter_updated_since:
6722
6722
  :type filter_updated_since: datetime
6723
6723
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
6724
6724
  :type filter_host: str
@@ -7226,8 +7226,8 @@ class VirusApi:
7226
7226
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
7227
7227
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
7228
7228
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
7229
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
7230
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
7229
+ filter_released_since: Optional[datetime] = None,
7230
+ filter_updated_since: Optional[datetime] = None,
7231
7231
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
7232
7232
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
7233
7233
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -7260,9 +7260,9 @@ class VirusApi:
7260
7260
  :type filter_refseq_only: bool
7261
7261
  :param filter_annotated_only: If true, limit results to annotated genomes.
7262
7262
  :type filter_annotated_only: bool
7263
- :param filter_released_since: Limit to genomes released on or after the specified date.
7263
+ :param filter_released_since:
7264
7264
  :type filter_released_since: datetime
7265
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
7265
+ :param filter_updated_since:
7266
7266
  :type filter_updated_since: datetime
7267
7267
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
7268
7268
  :type filter_host: str
@@ -7345,8 +7345,8 @@ class VirusApi:
7345
7345
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
7346
7346
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
7347
7347
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
7348
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
7349
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
7348
+ filter_released_since: Optional[datetime] = None,
7349
+ filter_updated_since: Optional[datetime] = None,
7350
7350
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
7351
7351
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
7352
7352
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -7379,9 +7379,9 @@ class VirusApi:
7379
7379
  :type filter_refseq_only: bool
7380
7380
  :param filter_annotated_only: If true, limit results to annotated genomes.
7381
7381
  :type filter_annotated_only: bool
7382
- :param filter_released_since: Limit to genomes released on or after the specified date.
7382
+ :param filter_released_since:
7383
7383
  :type filter_released_since: datetime
7384
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
7384
+ :param filter_updated_since:
7385
7385
  :type filter_updated_since: datetime
7386
7386
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
7387
7387
  :type filter_host: str
@@ -7464,8 +7464,8 @@ class VirusApi:
7464
7464
  taxon: Annotated[StrictStr, Field(description="NCBI Taxonomy ID or name (common or scientific) at any taxonomic rank")],
7465
7465
  filter_refseq_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to RefSeq genomes.")] = None,
7466
7466
  filter_annotated_only: Annotated[Optional[StrictBool], Field(description="If true, limit results to annotated genomes.")] = None,
7467
- filter_released_since: Annotated[Optional[datetime], Field(description="Limit to genomes released on or after the specified date.")] = None,
7468
- filter_updated_since: Annotated[Optional[datetime], Field(description="Limit to genomes updated on or after the specified date.")] = None,
7467
+ filter_released_since: Optional[datetime] = None,
7468
+ filter_updated_since: Optional[datetime] = None,
7469
7469
  filter_host: Annotated[Optional[StrictStr], Field(description="Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).")] = None,
7470
7470
  filter_pangolin_classification: Annotated[Optional[StrictStr], Field(description="Limit to SARS-CoV-2 genomes from the specified Pango lineage.")] = None,
7471
7471
  filter_geo_location: Annotated[Optional[StrictStr], Field(description="Limit to genomes collected from the specified geographic location.")] = None,
@@ -7498,9 +7498,9 @@ class VirusApi:
7498
7498
  :type filter_refseq_only: bool
7499
7499
  :param filter_annotated_only: If true, limit results to annotated genomes.
7500
7500
  :type filter_annotated_only: bool
7501
- :param filter_released_since: Limit to genomes released on or after the specified date.
7501
+ :param filter_released_since:
7502
7502
  :type filter_released_since: datetime
7503
- :param filter_updated_since: Limit to genomes updated on or after the specified date.
7503
+ :param filter_updated_since:
7504
7504
  :type filter_updated_since: datetime
7505
7505
  :param filter_host: Limit to genomes isolated from the specified host species (NCBI Taxonomy ID, common or scientific name).
7506
7506
  :type filter_host: str