napari-tmidas 0.2.1__py3-none-any.whl → 0.2.4__py3-none-any.whl

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Files changed (56) hide show
  1. napari_tmidas/__init__.py +35 -5
  2. napari_tmidas/_crop_anything.py +1458 -499
  3. napari_tmidas/_env_manager.py +76 -0
  4. napari_tmidas/_file_conversion.py +1646 -1131
  5. napari_tmidas/_file_selector.py +1464 -223
  6. napari_tmidas/_label_inspection.py +83 -8
  7. napari_tmidas/_processing_worker.py +309 -0
  8. napari_tmidas/_reader.py +6 -10
  9. napari_tmidas/_registry.py +15 -14
  10. napari_tmidas/_roi_colocalization.py +1221 -84
  11. napari_tmidas/_tests/test_crop_anything.py +123 -0
  12. napari_tmidas/_tests/test_env_manager.py +89 -0
  13. napari_tmidas/_tests/test_file_selector.py +90 -0
  14. napari_tmidas/_tests/test_grid_view_overlay.py +193 -0
  15. napari_tmidas/_tests/test_init.py +98 -0
  16. napari_tmidas/_tests/test_intensity_label_filter.py +222 -0
  17. napari_tmidas/_tests/test_label_inspection.py +86 -0
  18. napari_tmidas/_tests/test_processing_basic.py +500 -0
  19. napari_tmidas/_tests/test_processing_worker.py +142 -0
  20. napari_tmidas/_tests/test_regionprops_analysis.py +547 -0
  21. napari_tmidas/_tests/test_registry.py +135 -0
  22. napari_tmidas/_tests/test_scipy_filters.py +168 -0
  23. napari_tmidas/_tests/test_skimage_filters.py +259 -0
  24. napari_tmidas/_tests/test_split_channels.py +217 -0
  25. napari_tmidas/_tests/test_spotiflow.py +87 -0
  26. napari_tmidas/_tests/test_tyx_display_fix.py +142 -0
  27. napari_tmidas/_tests/test_ui_utils.py +68 -0
  28. napari_tmidas/_tests/test_widget.py +30 -0
  29. napari_tmidas/_tests/test_windows_basic.py +66 -0
  30. napari_tmidas/_ui_utils.py +57 -0
  31. napari_tmidas/_version.py +16 -3
  32. napari_tmidas/_widget.py +41 -4
  33. napari_tmidas/processing_functions/basic.py +557 -20
  34. napari_tmidas/processing_functions/careamics_env_manager.py +72 -99
  35. napari_tmidas/processing_functions/cellpose_env_manager.py +415 -112
  36. napari_tmidas/processing_functions/cellpose_segmentation.py +132 -191
  37. napari_tmidas/processing_functions/colocalization.py +513 -56
  38. napari_tmidas/processing_functions/grid_view_overlay.py +703 -0
  39. napari_tmidas/processing_functions/intensity_label_filter.py +422 -0
  40. napari_tmidas/processing_functions/regionprops_analysis.py +1280 -0
  41. napari_tmidas/processing_functions/sam2_env_manager.py +53 -69
  42. napari_tmidas/processing_functions/sam2_mp4.py +274 -195
  43. napari_tmidas/processing_functions/scipy_filters.py +403 -8
  44. napari_tmidas/processing_functions/skimage_filters.py +424 -212
  45. napari_tmidas/processing_functions/spotiflow_detection.py +949 -0
  46. napari_tmidas/processing_functions/spotiflow_env_manager.py +591 -0
  47. napari_tmidas/processing_functions/timepoint_merger.py +334 -86
  48. napari_tmidas/processing_functions/trackastra_tracking.py +24 -5
  49. {napari_tmidas-0.2.1.dist-info → napari_tmidas-0.2.4.dist-info}/METADATA +92 -39
  50. napari_tmidas-0.2.4.dist-info/RECORD +63 -0
  51. napari_tmidas/_tests/__init__.py +0 -0
  52. napari_tmidas-0.2.1.dist-info/RECORD +0 -38
  53. {napari_tmidas-0.2.1.dist-info → napari_tmidas-0.2.4.dist-info}/WHEEL +0 -0
  54. {napari_tmidas-0.2.1.dist-info → napari_tmidas-0.2.4.dist-info}/entry_points.txt +0 -0
  55. {napari_tmidas-0.2.1.dist-info → napari_tmidas-0.2.4.dist-info}/licenses/LICENSE +0 -0
  56. {napari_tmidas-0.2.1.dist-info → napari_tmidas-0.2.4.dist-info}/top_level.txt +0 -0
napari_tmidas/__init__.py CHANGED
@@ -3,12 +3,42 @@ try:
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  except ImportError:
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  __version__ = "unknown"
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+ # Conditional imports - these might fail on Windows without dependencies
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+ try:
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+ from ._file_selector import file_selector
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+ except ImportError:
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+ file_selector = None
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+
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+ try:
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+ from ._reader import napari_get_reader
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+ except ImportError:
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+ napari_get_reader = None
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- from ._label_inspection import label_inspector_widget
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- from ._reader import napari_get_reader
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- from ._roi_colocalization import roi_colocalization_analyzer
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- from ._sample_data import make_sample_data
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- from ._writer import write_multiple, write_single_image
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+ try:
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+ from ._sample_data import make_sample_data
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+ except ImportError:
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+ make_sample_data = None
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+
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+ try:
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+ from ._writer import write_multiple, write_single_image
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+ except ImportError:
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+ write_multiple = None
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+ write_single_image = None
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+
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+ try:
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+ from ._label_inspection import label_inspector_widget
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+ except ImportError:
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+ label_inspector_widget = None
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+
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+ try:
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+ from ._roi_colocalization import roi_colocalization_analyzer
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+ except ImportError:
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+ roi_colocalization_analyzer = None
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+
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+ try:
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+ from ._crop_anything import batch_crop_anything_widget
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+ except ImportError:
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+ batch_crop_anything_widget = None
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  __all__ = (
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  "napari_get_reader",