multipers 2.3.3b6__cp312-cp312-manylinux_2_39_x86_64.whl
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- multipers/__init__.py +33 -0
- multipers/_signed_measure_meta.py +453 -0
- multipers/_slicer_meta.py +211 -0
- multipers/array_api/__init__.py +45 -0
- multipers/array_api/numpy.py +41 -0
- multipers/array_api/torch.py +58 -0
- multipers/data/MOL2.py +458 -0
- multipers/data/UCR.py +18 -0
- multipers/data/__init__.py +1 -0
- multipers/data/graphs.py +466 -0
- multipers/data/immuno_regions.py +27 -0
- multipers/data/minimal_presentation_to_st_bf.py +0 -0
- multipers/data/pytorch2simplextree.py +91 -0
- multipers/data/shape3d.py +101 -0
- multipers/data/synthetic.py +113 -0
- multipers/distances.py +202 -0
- multipers/filtration_conversions.pxd +229 -0
- multipers/filtration_conversions.pxd.tp +84 -0
- multipers/filtrations/__init__.py +18 -0
- multipers/filtrations/density.py +574 -0
- multipers/filtrations/filtrations.py +361 -0
- multipers/filtrations.pxd +224 -0
- multipers/function_rips.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/function_rips.pyx +105 -0
- multipers/grids.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/grids.pyx +433 -0
- multipers/gudhi/Persistence_slices_interface.h +132 -0
- multipers/gudhi/Simplex_tree_interface.h +239 -0
- multipers/gudhi/Simplex_tree_multi_interface.h +551 -0
- multipers/gudhi/cubical_to_boundary.h +59 -0
- multipers/gudhi/gudhi/Bitmap_cubical_complex.h +450 -0
- multipers/gudhi/gudhi/Bitmap_cubical_complex_base.h +1070 -0
- multipers/gudhi/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h +579 -0
- multipers/gudhi/gudhi/Debug_utils.h +45 -0
- multipers/gudhi/gudhi/Fields/Multi_field.h +484 -0
- multipers/gudhi/gudhi/Fields/Multi_field_operators.h +455 -0
- multipers/gudhi/gudhi/Fields/Multi_field_shared.h +450 -0
- multipers/gudhi/gudhi/Fields/Multi_field_small.h +531 -0
- multipers/gudhi/gudhi/Fields/Multi_field_small_operators.h +507 -0
- multipers/gudhi/gudhi/Fields/Multi_field_small_shared.h +531 -0
- multipers/gudhi/gudhi/Fields/Z2_field.h +355 -0
- multipers/gudhi/gudhi/Fields/Z2_field_operators.h +376 -0
- multipers/gudhi/gudhi/Fields/Zp_field.h +420 -0
- multipers/gudhi/gudhi/Fields/Zp_field_operators.h +400 -0
- multipers/gudhi/gudhi/Fields/Zp_field_shared.h +418 -0
- multipers/gudhi/gudhi/Flag_complex_edge_collapser.h +337 -0
- multipers/gudhi/gudhi/Matrix.h +2107 -0
- multipers/gudhi/gudhi/Multi_critical_filtration.h +1038 -0
- multipers/gudhi/gudhi/Multi_persistence/Box.h +174 -0
- multipers/gudhi/gudhi/Multi_persistence/Line.h +282 -0
- multipers/gudhi/gudhi/Off_reader.h +173 -0
- multipers/gudhi/gudhi/One_critical_filtration.h +1441 -0
- multipers/gudhi/gudhi/Persistence_matrix/Base_matrix.h +769 -0
- multipers/gudhi/gudhi/Persistence_matrix/Base_matrix_with_column_compression.h +686 -0
- multipers/gudhi/gudhi/Persistence_matrix/Boundary_matrix.h +842 -0
- multipers/gudhi/gudhi/Persistence_matrix/Chain_matrix.h +1350 -0
- multipers/gudhi/gudhi/Persistence_matrix/Id_to_index_overlay.h +1105 -0
- multipers/gudhi/gudhi/Persistence_matrix/Position_to_index_overlay.h +859 -0
- multipers/gudhi/gudhi/Persistence_matrix/RU_matrix.h +910 -0
- multipers/gudhi/gudhi/Persistence_matrix/allocators/entry_constructors.h +139 -0
- multipers/gudhi/gudhi/Persistence_matrix/base_pairing.h +230 -0
- multipers/gudhi/gudhi/Persistence_matrix/base_swap.h +211 -0
- multipers/gudhi/gudhi/Persistence_matrix/boundary_cell_position_to_id_mapper.h +60 -0
- multipers/gudhi/gudhi/Persistence_matrix/boundary_face_position_to_id_mapper.h +60 -0
- multipers/gudhi/gudhi/Persistence_matrix/chain_pairing.h +136 -0
- multipers/gudhi/gudhi/Persistence_matrix/chain_rep_cycles.h +190 -0
- multipers/gudhi/gudhi/Persistence_matrix/chain_vine_swap.h +616 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/chain_column_extra_properties.h +150 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/column_dimension_holder.h +106 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/column_utilities.h +219 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/entry_types.h +327 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/heap_column.h +1140 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_list_column.h +934 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_set_column.h +934 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/list_column.h +980 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/naive_vector_column.h +1092 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/row_access.h +192 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/set_column.h +921 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/small_vector_column.h +1093 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/unordered_set_column.h +1012 -0
- multipers/gudhi/gudhi/Persistence_matrix/columns/vector_column.h +1244 -0
- multipers/gudhi/gudhi/Persistence_matrix/matrix_dimension_holders.h +186 -0
- multipers/gudhi/gudhi/Persistence_matrix/matrix_row_access.h +164 -0
- multipers/gudhi/gudhi/Persistence_matrix/ru_pairing.h +156 -0
- multipers/gudhi/gudhi/Persistence_matrix/ru_rep_cycles.h +376 -0
- multipers/gudhi/gudhi/Persistence_matrix/ru_vine_swap.h +540 -0
- multipers/gudhi/gudhi/Persistent_cohomology/Field_Zp.h +118 -0
- multipers/gudhi/gudhi/Persistent_cohomology/Multi_field.h +173 -0
- multipers/gudhi/gudhi/Persistent_cohomology/Persistent_cohomology_column.h +128 -0
- multipers/gudhi/gudhi/Persistent_cohomology.h +745 -0
- multipers/gudhi/gudhi/Points_off_io.h +171 -0
- multipers/gudhi/gudhi/Simple_object_pool.h +69 -0
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_iterators.h +463 -0
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h +83 -0
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_siblings.h +106 -0
- multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_star_simplex_iterators.h +277 -0
- multipers/gudhi/gudhi/Simplex_tree/hooks_simplex_base.h +62 -0
- multipers/gudhi/gudhi/Simplex_tree/indexing_tag.h +27 -0
- multipers/gudhi/gudhi/Simplex_tree/serialization_utils.h +62 -0
- multipers/gudhi/gudhi/Simplex_tree/simplex_tree_options.h +157 -0
- multipers/gudhi/gudhi/Simplex_tree.h +2794 -0
- multipers/gudhi/gudhi/Simplex_tree_multi.h +152 -0
- multipers/gudhi/gudhi/distance_functions.h +62 -0
- multipers/gudhi/gudhi/graph_simplicial_complex.h +104 -0
- multipers/gudhi/gudhi/persistence_interval.h +253 -0
- multipers/gudhi/gudhi/persistence_matrix_options.h +170 -0
- multipers/gudhi/gudhi/reader_utils.h +367 -0
- multipers/gudhi/mma_interface_coh.h +256 -0
- multipers/gudhi/mma_interface_h0.h +223 -0
- multipers/gudhi/mma_interface_matrix.h +293 -0
- multipers/gudhi/naive_merge_tree.h +536 -0
- multipers/gudhi/scc_io.h +310 -0
- multipers/gudhi/truc.h +1403 -0
- multipers/io.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/io.pyx +644 -0
- multipers/ml/__init__.py +0 -0
- multipers/ml/accuracies.py +90 -0
- multipers/ml/invariants_with_persistable.py +79 -0
- multipers/ml/kernels.py +176 -0
- multipers/ml/mma.py +713 -0
- multipers/ml/one.py +472 -0
- multipers/ml/point_clouds.py +352 -0
- multipers/ml/signed_measures.py +1589 -0
- multipers/ml/sliced_wasserstein.py +461 -0
- multipers/ml/tools.py +113 -0
- multipers/mma_structures.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/mma_structures.pxd +128 -0
- multipers/mma_structures.pyx +2786 -0
- multipers/mma_structures.pyx.tp +1094 -0
- multipers/multi_parameter_rank_invariant/diff_helpers.h +84 -0
- multipers/multi_parameter_rank_invariant/euler_characteristic.h +97 -0
- multipers/multi_parameter_rank_invariant/function_rips.h +322 -0
- multipers/multi_parameter_rank_invariant/hilbert_function.h +769 -0
- multipers/multi_parameter_rank_invariant/persistence_slices.h +148 -0
- multipers/multi_parameter_rank_invariant/rank_invariant.h +369 -0
- multipers/multiparameter_edge_collapse.py +41 -0
- multipers/multiparameter_module_approximation/approximation.h +2330 -0
- multipers/multiparameter_module_approximation/combinatory.h +129 -0
- multipers/multiparameter_module_approximation/debug.h +107 -0
- multipers/multiparameter_module_approximation/euler_curves.h +0 -0
- multipers/multiparameter_module_approximation/format_python-cpp.h +286 -0
- multipers/multiparameter_module_approximation/heap_column.h +238 -0
- multipers/multiparameter_module_approximation/images.h +79 -0
- multipers/multiparameter_module_approximation/list_column.h +174 -0
- multipers/multiparameter_module_approximation/list_column_2.h +232 -0
- multipers/multiparameter_module_approximation/ru_matrix.h +347 -0
- multipers/multiparameter_module_approximation/set_column.h +135 -0
- multipers/multiparameter_module_approximation/structure_higher_dim_barcode.h +36 -0
- multipers/multiparameter_module_approximation/unordered_set_column.h +166 -0
- multipers/multiparameter_module_approximation/utilities.h +403 -0
- multipers/multiparameter_module_approximation/vector_column.h +223 -0
- multipers/multiparameter_module_approximation/vector_matrix.h +331 -0
- multipers/multiparameter_module_approximation/vineyards.h +464 -0
- multipers/multiparameter_module_approximation/vineyards_trajectories.h +649 -0
- multipers/multiparameter_module_approximation.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/multiparameter_module_approximation.pyx +235 -0
- multipers/pickle.py +90 -0
- multipers/plots.py +456 -0
- multipers/point_measure.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/point_measure.pyx +395 -0
- multipers/simplex_tree_multi.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/simplex_tree_multi.pxd +134 -0
- multipers/simplex_tree_multi.pyx +10840 -0
- multipers/simplex_tree_multi.pyx.tp +2009 -0
- multipers/slicer.cpython-312-x86_64-linux-gnu.so +0 -0
- multipers/slicer.pxd +3034 -0
- multipers/slicer.pxd.tp +234 -0
- multipers/slicer.pyx +20481 -0
- multipers/slicer.pyx.tp +1088 -0
- multipers/tensor/tensor.h +672 -0
- multipers/tensor.pxd +13 -0
- multipers/test.pyx +44 -0
- multipers/tests/__init__.py +62 -0
- multipers/torch/__init__.py +1 -0
- multipers/torch/diff_grids.py +240 -0
- multipers/torch/rips_density.py +310 -0
- multipers-2.3.3b6.dist-info/METADATA +128 -0
- multipers-2.3.3b6.dist-info/RECORD +182 -0
- multipers-2.3.3b6.dist-info/WHEEL +5 -0
- multipers-2.3.3b6.dist-info/licenses/LICENSE +21 -0
- multipers-2.3.3b6.dist-info/top_level.txt +1 -0
- multipers.libs/libtbb-ca48af5c.so.12.16 +0 -0
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/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
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* See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
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* Author(s): Hannah Schreiber
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*
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* Copyright (C) 2024 Inria
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*
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* Modification(s):
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* - YYYY/MM Author: Description of the modification
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*/
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/**
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* @file Zp_field_operators.h
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* @author Hannah Schreiber
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* @brief Contains the @ref Gudhi::persistence_fields::Zp_field_operators class.
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*/
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#ifndef MATRIX_FIELD_ZP_OPERATOR_H_
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#define MATRIX_FIELD_ZP_OPERATOR_H_
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#include <stdexcept>
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#include <utility>
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#include <vector>
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#include <limits.h>
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namespace Gudhi {
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/// Field namespace
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namespace persistence_fields {
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/**
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* @class Zp_field_operators Zp_field_operators.h gudhi/Fields/Zp_field_operators.h
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* @ingroup persistence_fields
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*
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* @brief Class defining operators for the \f$ \mathbb{F}_p \f$ field for any prime number \f$ p \f$.
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*
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* @tparam Unsigned_integer_type A native unsigned integer type: unsigned int, long unsigned int, etc.
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* Will be used as the field element type.
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*/
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template <typename Unsigned_integer_type = unsigned int,
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class = std::enable_if_t<std::is_unsigned_v<Unsigned_integer_type> > >
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class Zp_field_operators
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{
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public:
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using Element = Unsigned_integer_type; /**< Type for the elements in the field. */
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using Characteristic = Element; /**< Type for the field characteristic. */
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template <class T>
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using isSignedInteger = std::enable_if_t<std::is_signed_v<T> >;
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/**
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* @brief Default constructor. If a non-zero characteristic is given, initializes the field with it.
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* The characteristic can later be changed again or initialized with @ref set_characteristic.
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*
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* @param characteristic Prime number corresponding to the desired characteristic of the field.
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*/
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Zp_field_operators(Characteristic characteristic = 0) : characteristic_(0) {
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if (characteristic != 0) set_characteristic(characteristic);
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}
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/**
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* @brief Copy constructor.
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*
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* @param toCopy Operators to copy.
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*/
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Zp_field_operators(const Zp_field_operators& toCopy)
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: characteristic_(toCopy.characteristic_), inverse_(toCopy.inverse_) {}
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/**
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* @brief Move constructor.
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*
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* @param toMove Operators to move.
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*/
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Zp_field_operators(Zp_field_operators&& toMove) noexcept
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: characteristic_(std::exchange(toMove.characteristic_, 0)), inverse_(std::move(toMove.inverse_)) {}
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/**
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* @brief Sets the characteristic of the field.
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*
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* @param characteristic Prime number corresponding to the desired characteristic of the field.
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*/
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void set_characteristic(Characteristic characteristic) {
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if (characteristic <= 1)
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throw std::invalid_argument("Characteristic must be strictly positive and a prime number.");
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inverse_.resize(characteristic);
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inverse_[0] = 0;
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for (unsigned int i = 1; i < characteristic; ++i) {
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unsigned int inv = 1;
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unsigned int mult = inv * i;
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while ((mult % characteristic) != 1) {
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++inv;
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if (mult == characteristic) throw std::invalid_argument("Characteristic must be a prime number.");
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mult = inv * i;
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}
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inverse_[i] = inv;
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}
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characteristic_ = characteristic;
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}
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/**
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* @brief Returns the current characteristic.
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*
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* @return The value of the current characteristic.
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*/
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const Characteristic& get_characteristic() const { return characteristic_; }
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/**
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* @brief Returns the value of an integer in the field.
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* That is the positive value of the integer modulo the current characteristic.
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*
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* @param e Unsigned integer to return the value from.
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* @return @p e modulo the current characteristic, such that the result is positive.
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*/
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Element get_value(Element e) const { return e < characteristic_ ? e : e % characteristic_; }
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/**
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* @brief Returns the value of an integer in the field.
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* That is the positive value of the integer modulo the current characteristic.
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*
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* @tparam Signed_integer_type A native signed integer type: int, long int, etc.
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* @param e Integer to return the value from.
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* @return @p e modulo the current characteristic, such that the result is positive.
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*/
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template <typename Signed_integer_type, class = isSignedInteger<Signed_integer_type> >
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Element get_value(Signed_integer_type e) const {
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if (e < -static_cast<Signed_integer_type>(characteristic_)) e = e % characteristic_;
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if (e < 0) return e += characteristic_;
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return e < static_cast<Signed_integer_type>(characteristic_) ? e : e % characteristic_;
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}
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/**
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* @brief Returns the sum of two elements in the field.
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*
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* @param e1 First element.
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* @param e2 Second element.
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* @return `(e1 + e2) % characteristic`, such that the result is positive.
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*/
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Element add(Element e1, Element e2) const {
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return _add(get_value(e1), get_value(e2), characteristic_);
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}
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/**
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* @brief Stores in the first element the sum of two given elements in the field, that is
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+
* `(e1 + e2) % characteristic`, such that the result is positive.
|
|
140
|
+
*
|
|
141
|
+
* @param e1 First element.
|
|
142
|
+
* @param e2 Second element.
|
|
143
|
+
*/
|
|
144
|
+
void add_inplace(Element& e1, Element e2) const {
|
|
145
|
+
e1 = _add(get_value(e1), get_value(e2), characteristic_);
|
|
146
|
+
}
|
|
147
|
+
|
|
148
|
+
/**
|
|
149
|
+
* @brief Returns the subtraction in the field of the first element by the second element.
|
|
150
|
+
*
|
|
151
|
+
* @param e1 First element.
|
|
152
|
+
* @param e2 Second element.
|
|
153
|
+
* @return `(e1 - e2) % characteristic`, such that the result is positive.
|
|
154
|
+
*/
|
|
155
|
+
Element subtract(Element e1, Element e2) const {
|
|
156
|
+
return _subtract(get_value(e1), get_value(e2), characteristic_);
|
|
157
|
+
}
|
|
158
|
+
|
|
159
|
+
/**
|
|
160
|
+
* @brief Stores in the first element the subtraction in the field of the first element by the second element,
|
|
161
|
+
* that is `(e1 - e2) % 2`, such that the result is positive.
|
|
162
|
+
*
|
|
163
|
+
* @param e1 First element.
|
|
164
|
+
* @param e2 Second element.
|
|
165
|
+
*/
|
|
166
|
+
void subtract_inplace_front(Element& e1, Element e2) const {
|
|
167
|
+
e1 = _subtract(get_value(e1), get_value(e2), characteristic_);
|
|
168
|
+
}
|
|
169
|
+
/**
|
|
170
|
+
* @brief Stores in the second element the subtraction in the field of the first element by the second element,
|
|
171
|
+
* that is `(e1 - e2) % 2`, such that the result is positive.
|
|
172
|
+
*
|
|
173
|
+
* @param e1 First element.
|
|
174
|
+
* @param e2 Second element.
|
|
175
|
+
*/
|
|
176
|
+
void subtract_inplace_back(Element e1, Element& e2) const {
|
|
177
|
+
e2 = _subtract(get_value(e1), get_value(e2), characteristic_);
|
|
178
|
+
}
|
|
179
|
+
|
|
180
|
+
/**
|
|
181
|
+
* @brief Returns the multiplication of two elements in the field.
|
|
182
|
+
*
|
|
183
|
+
* @param e1 First element.
|
|
184
|
+
* @param e2 Second element.
|
|
185
|
+
* @return `(e1 * e2) % characteristic`, such that the result is positive.
|
|
186
|
+
*/
|
|
187
|
+
Element multiply(Element e1, Element e2) const {
|
|
188
|
+
return _multiply(get_value(e1), get_value(e2), characteristic_);
|
|
189
|
+
}
|
|
190
|
+
|
|
191
|
+
/**
|
|
192
|
+
* @brief Stores in the first element the multiplication of two given elements in the field,
|
|
193
|
+
* that is `(e1 * e2) % characteristic`, such that the result is positive.
|
|
194
|
+
*
|
|
195
|
+
* @param e1 First element.
|
|
196
|
+
* @param e2 Second element.
|
|
197
|
+
*/
|
|
198
|
+
void multiply_inplace(Element& e1, Element e2) const {
|
|
199
|
+
e1 = _multiply(get_value(e1), get_value(e2), characteristic_);
|
|
200
|
+
}
|
|
201
|
+
|
|
202
|
+
/**
|
|
203
|
+
* @brief Multiplies the first element with the second one and adds the third one. Returns the result in the field.
|
|
204
|
+
*
|
|
205
|
+
* @warning Not overflow safe.
|
|
206
|
+
*
|
|
207
|
+
* @param e First element.
|
|
208
|
+
* @param m Second element.
|
|
209
|
+
* @param a Third element.
|
|
210
|
+
* @return `(e * m + a) % characteristic`, such that the result is positive.
|
|
211
|
+
*/
|
|
212
|
+
Element multiply_and_add(Element e, Element m, Element a) const { return get_value(e * m + a); }
|
|
213
|
+
|
|
214
|
+
/**
|
|
215
|
+
* @brief Multiplies the first element with the second one and adds the third one, that is
|
|
216
|
+
* `(e * m + a) % characteristic`, such that the result is positive. Stores the result in the first element.
|
|
217
|
+
*
|
|
218
|
+
* @warning Not overflow safe.
|
|
219
|
+
*
|
|
220
|
+
* @param e First element.
|
|
221
|
+
* @param m Second element.
|
|
222
|
+
* @param a Third element.
|
|
223
|
+
*/
|
|
224
|
+
void multiply_and_add_inplace_front(Element& e, Element m, Element a) const {
|
|
225
|
+
e = get_value(e * m + a);
|
|
226
|
+
}
|
|
227
|
+
/**
|
|
228
|
+
* @brief Multiplies the first element with the second one and adds the third one, that is
|
|
229
|
+
* `(e * m + a) % characteristic`, such that the result is positive. Stores the result in the third element.
|
|
230
|
+
*
|
|
231
|
+
* @warning Not overflow safe.
|
|
232
|
+
*
|
|
233
|
+
* @param e First element.
|
|
234
|
+
* @param m Second element.
|
|
235
|
+
* @param a Third element.
|
|
236
|
+
*/
|
|
237
|
+
void multiply_and_add_inplace_back(Element e, Element m, Element& a) const {
|
|
238
|
+
a = get_value(e * m + a);
|
|
239
|
+
}
|
|
240
|
+
|
|
241
|
+
/**
|
|
242
|
+
* @brief Adds the first element to the second one and multiplies the third one with it.
|
|
243
|
+
* Returns the result in the field.
|
|
244
|
+
*
|
|
245
|
+
* @warning Not overflow safe.
|
|
246
|
+
*
|
|
247
|
+
* @param e First element.
|
|
248
|
+
* @param a Second element.
|
|
249
|
+
* @param m Third element.
|
|
250
|
+
* @return `((e + a) * m) % characteristic`, such that the result is positive.
|
|
251
|
+
*/
|
|
252
|
+
Element add_and_multiply(Element e, Element a, Element m) const { return get_value((e + a) * m); }
|
|
253
|
+
|
|
254
|
+
/**
|
|
255
|
+
* @brief Adds the first element to the second one and multiplies the third one with it, that is
|
|
256
|
+
* `((e + a) * m) % characteristic`, such that the result is positive. Stores the result in the first element.
|
|
257
|
+
*
|
|
258
|
+
* @warning Not overflow safe.
|
|
259
|
+
*
|
|
260
|
+
* @param e First element.
|
|
261
|
+
* @param a Second element.
|
|
262
|
+
* @param m Third element.
|
|
263
|
+
*/
|
|
264
|
+
void add_and_multiply_inplace_front(Element& e, Element a, Element m) const {
|
|
265
|
+
e = get_value((e + a) * m);
|
|
266
|
+
}
|
|
267
|
+
/**
|
|
268
|
+
* @brief Adds the first element to the second one and multiplies the third one with it, that is
|
|
269
|
+
* `((e + a) * m) % characteristic`, such that the result is positive. Stores the result in the third element.
|
|
270
|
+
*
|
|
271
|
+
* @warning Not overflow safe.
|
|
272
|
+
*
|
|
273
|
+
* @param e First element.
|
|
274
|
+
* @param a Second element.
|
|
275
|
+
* @param m Third element.
|
|
276
|
+
*/
|
|
277
|
+
void add_and_multiply_inplace_back(Element e, Element a, Element& m) const {
|
|
278
|
+
m = get_value((e + a) * m);
|
|
279
|
+
}
|
|
280
|
+
|
|
281
|
+
/**
|
|
282
|
+
* @brief Returns true if the two given elements are equal in the field, false otherwise.
|
|
283
|
+
*
|
|
284
|
+
* @param e1 First element to compare.
|
|
285
|
+
* @param e2 Second element to compare.
|
|
286
|
+
* @return true If `e1 % characteristic == e2 % characteristic`.
|
|
287
|
+
* @return false Otherwise.
|
|
288
|
+
*/
|
|
289
|
+
bool are_equal(Element e1, Element e2) const { return get_value(e1) == get_value(e2); }
|
|
290
|
+
|
|
291
|
+
/**
|
|
292
|
+
* @brief Returns the inverse of the given element in the field.
|
|
293
|
+
*
|
|
294
|
+
* @param e Element to get the inverse from.
|
|
295
|
+
* @return Inverse in the current field of `e % characteristic`.
|
|
296
|
+
*/
|
|
297
|
+
Element get_inverse(Element e) const { return inverse_[get_value(e)]; }
|
|
298
|
+
/**
|
|
299
|
+
* @brief For interface purposes with multi-fields. Returns the inverse together with the second argument.
|
|
300
|
+
*
|
|
301
|
+
* @param e Element to get the inverse from.
|
|
302
|
+
* @param productOfCharacteristics Some value.
|
|
303
|
+
* @return Pair whose first element is the inverse of @p e and the second element is @p productOfCharacteristics.
|
|
304
|
+
*/
|
|
305
|
+
std::pair<Element, Characteristic> get_partial_inverse(Element e,
|
|
306
|
+
Characteristic productOfCharacteristics) const {
|
|
307
|
+
return {get_inverse(e), productOfCharacteristics};
|
|
308
|
+
}
|
|
309
|
+
|
|
310
|
+
/**
|
|
311
|
+
* @brief Returns the additive identity of the field.
|
|
312
|
+
*
|
|
313
|
+
* @return 0.
|
|
314
|
+
*/
|
|
315
|
+
static constexpr Element get_additive_identity() { return 0; }
|
|
316
|
+
/**
|
|
317
|
+
* @brief Returns the multiplicative identity of the field.
|
|
318
|
+
*
|
|
319
|
+
* @return 1.
|
|
320
|
+
*/
|
|
321
|
+
static constexpr Element get_multiplicative_identity() { return 1; }
|
|
322
|
+
/**
|
|
323
|
+
* @brief For interface purposes with multi-fields. Returns the multiplicative identity of the field.
|
|
324
|
+
*
|
|
325
|
+
* @param productOfCharacteristics Some value.
|
|
326
|
+
* @return 1.
|
|
327
|
+
*/
|
|
328
|
+
static constexpr Element get_partial_multiplicative_identity(
|
|
329
|
+
[[maybe_unused]] Characteristic productOfCharacteristics) {
|
|
330
|
+
return 1;
|
|
331
|
+
}
|
|
332
|
+
|
|
333
|
+
// static constexpr bool handles_only_z2() { return false; }
|
|
334
|
+
|
|
335
|
+
/**
|
|
336
|
+
* @brief Assign operator.
|
|
337
|
+
*/
|
|
338
|
+
Zp_field_operators& operator=(Zp_field_operators other) {
|
|
339
|
+
std::swap(characteristic_, other.characteristic_);
|
|
340
|
+
inverse_.swap(other.inverse_);
|
|
341
|
+
return *this;
|
|
342
|
+
}
|
|
343
|
+
/**
|
|
344
|
+
* @brief Swap operator.
|
|
345
|
+
*/
|
|
346
|
+
friend void swap(Zp_field_operators& f1, Zp_field_operators& f2) {
|
|
347
|
+
std::swap(f1.characteristic_, f2.characteristic_);
|
|
348
|
+
f1.inverse_.swap(f2.inverse_);
|
|
349
|
+
}
|
|
350
|
+
|
|
351
|
+
private:
|
|
352
|
+
Characteristic characteristic_; /**< Current characteristic of the field. */
|
|
353
|
+
std::vector<Element> inverse_; /**< All inverse elements. */
|
|
354
|
+
|
|
355
|
+
static Element _add(Element e1, Element e2, Characteristic characteristic) {
|
|
356
|
+
if (UINT_MAX - e1 < e2) {
|
|
357
|
+
// automatic unsigned integer overflow behaviour will make it work
|
|
358
|
+
e1 += e2;
|
|
359
|
+
e1 -= characteristic;
|
|
360
|
+
return e1;
|
|
361
|
+
}
|
|
362
|
+
|
|
363
|
+
e1 += e2;
|
|
364
|
+
if (e1 >= characteristic) e1 -= characteristic;
|
|
365
|
+
|
|
366
|
+
return e1;
|
|
367
|
+
}
|
|
368
|
+
static Element _subtract(Element e1, Element e2, Characteristic characteristic) {
|
|
369
|
+
if (e1 < e2) {
|
|
370
|
+
e1 += characteristic;
|
|
371
|
+
}
|
|
372
|
+
e1 -= e2;
|
|
373
|
+
|
|
374
|
+
return e1;
|
|
375
|
+
}
|
|
376
|
+
static Element _multiply(Element e1, Element e2, Characteristic characteristic) {
|
|
377
|
+
unsigned int a = e1;
|
|
378
|
+
e1 = 0;
|
|
379
|
+
unsigned int temp_b;
|
|
380
|
+
|
|
381
|
+
while (a != 0) {
|
|
382
|
+
if (a & 1) {
|
|
383
|
+
if (e2 >= characteristic - e1) e1 -= characteristic;
|
|
384
|
+
e1 += e2;
|
|
385
|
+
}
|
|
386
|
+
a >>= 1;
|
|
387
|
+
|
|
388
|
+
temp_b = e2;
|
|
389
|
+
if (e2 >= characteristic - e2) temp_b -= characteristic;
|
|
390
|
+
e2 += temp_b;
|
|
391
|
+
}
|
|
392
|
+
|
|
393
|
+
return e1;
|
|
394
|
+
}
|
|
395
|
+
};
|
|
396
|
+
|
|
397
|
+
} // namespace persistence_fields
|
|
398
|
+
} // namespace Gudhi
|
|
399
|
+
|
|
400
|
+
#endif // MATRIX_FIELD_ZP_OPERATOR_H_
|