multipers 2.2.3__cp310-cp310-win_amd64.whl

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  1. multipers/__init__.py +31 -0
  2. multipers/_signed_measure_meta.py +430 -0
  3. multipers/_slicer_meta.py +212 -0
  4. multipers/data/MOL2.py +458 -0
  5. multipers/data/UCR.py +18 -0
  6. multipers/data/__init__.py +1 -0
  7. multipers/data/graphs.py +466 -0
  8. multipers/data/immuno_regions.py +27 -0
  9. multipers/data/minimal_presentation_to_st_bf.py +0 -0
  10. multipers/data/pytorch2simplextree.py +91 -0
  11. multipers/data/shape3d.py +101 -0
  12. multipers/data/synthetic.py +111 -0
  13. multipers/distances.py +198 -0
  14. multipers/filtration_conversions.pxd +229 -0
  15. multipers/filtration_conversions.pxd.tp +84 -0
  16. multipers/filtrations.pxd +224 -0
  17. multipers/function_rips.cp310-win_amd64.pyd +0 -0
  18. multipers/function_rips.pyx +105 -0
  19. multipers/grids.cp310-win_amd64.pyd +0 -0
  20. multipers/grids.pyx +350 -0
  21. multipers/gudhi/Persistence_slices_interface.h +132 -0
  22. multipers/gudhi/Simplex_tree_interface.h +245 -0
  23. multipers/gudhi/Simplex_tree_multi_interface.h +561 -0
  24. multipers/gudhi/cubical_to_boundary.h +59 -0
  25. multipers/gudhi/gudhi/Bitmap_cubical_complex.h +450 -0
  26. multipers/gudhi/gudhi/Bitmap_cubical_complex_base.h +1070 -0
  27. multipers/gudhi/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h +579 -0
  28. multipers/gudhi/gudhi/Debug_utils.h +45 -0
  29. multipers/gudhi/gudhi/Fields/Multi_field.h +484 -0
  30. multipers/gudhi/gudhi/Fields/Multi_field_operators.h +455 -0
  31. multipers/gudhi/gudhi/Fields/Multi_field_shared.h +450 -0
  32. multipers/gudhi/gudhi/Fields/Multi_field_small.h +531 -0
  33. multipers/gudhi/gudhi/Fields/Multi_field_small_operators.h +507 -0
  34. multipers/gudhi/gudhi/Fields/Multi_field_small_shared.h +531 -0
  35. multipers/gudhi/gudhi/Fields/Z2_field.h +355 -0
  36. multipers/gudhi/gudhi/Fields/Z2_field_operators.h +376 -0
  37. multipers/gudhi/gudhi/Fields/Zp_field.h +420 -0
  38. multipers/gudhi/gudhi/Fields/Zp_field_operators.h +400 -0
  39. multipers/gudhi/gudhi/Fields/Zp_field_shared.h +418 -0
  40. multipers/gudhi/gudhi/Flag_complex_edge_collapser.h +337 -0
  41. multipers/gudhi/gudhi/Matrix.h +2107 -0
  42. multipers/gudhi/gudhi/Multi_critical_filtration.h +1038 -0
  43. multipers/gudhi/gudhi/Multi_persistence/Box.h +171 -0
  44. multipers/gudhi/gudhi/Multi_persistence/Line.h +282 -0
  45. multipers/gudhi/gudhi/Off_reader.h +173 -0
  46. multipers/gudhi/gudhi/One_critical_filtration.h +1431 -0
  47. multipers/gudhi/gudhi/Persistence_matrix/Base_matrix.h +769 -0
  48. multipers/gudhi/gudhi/Persistence_matrix/Base_matrix_with_column_compression.h +686 -0
  49. multipers/gudhi/gudhi/Persistence_matrix/Boundary_matrix.h +842 -0
  50. multipers/gudhi/gudhi/Persistence_matrix/Chain_matrix.h +1350 -0
  51. multipers/gudhi/gudhi/Persistence_matrix/Id_to_index_overlay.h +1105 -0
  52. multipers/gudhi/gudhi/Persistence_matrix/Position_to_index_overlay.h +859 -0
  53. multipers/gudhi/gudhi/Persistence_matrix/RU_matrix.h +910 -0
  54. multipers/gudhi/gudhi/Persistence_matrix/allocators/entry_constructors.h +139 -0
  55. multipers/gudhi/gudhi/Persistence_matrix/base_pairing.h +230 -0
  56. multipers/gudhi/gudhi/Persistence_matrix/base_swap.h +211 -0
  57. multipers/gudhi/gudhi/Persistence_matrix/boundary_cell_position_to_id_mapper.h +60 -0
  58. multipers/gudhi/gudhi/Persistence_matrix/boundary_face_position_to_id_mapper.h +60 -0
  59. multipers/gudhi/gudhi/Persistence_matrix/chain_pairing.h +136 -0
  60. multipers/gudhi/gudhi/Persistence_matrix/chain_rep_cycles.h +190 -0
  61. multipers/gudhi/gudhi/Persistence_matrix/chain_vine_swap.h +616 -0
  62. multipers/gudhi/gudhi/Persistence_matrix/columns/chain_column_extra_properties.h +150 -0
  63. multipers/gudhi/gudhi/Persistence_matrix/columns/column_dimension_holder.h +106 -0
  64. multipers/gudhi/gudhi/Persistence_matrix/columns/column_utilities.h +219 -0
  65. multipers/gudhi/gudhi/Persistence_matrix/columns/entry_types.h +327 -0
  66. multipers/gudhi/gudhi/Persistence_matrix/columns/heap_column.h +1140 -0
  67. multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_list_column.h +934 -0
  68. multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_set_column.h +934 -0
  69. multipers/gudhi/gudhi/Persistence_matrix/columns/list_column.h +980 -0
  70. multipers/gudhi/gudhi/Persistence_matrix/columns/naive_vector_column.h +1092 -0
  71. multipers/gudhi/gudhi/Persistence_matrix/columns/row_access.h +192 -0
  72. multipers/gudhi/gudhi/Persistence_matrix/columns/set_column.h +921 -0
  73. multipers/gudhi/gudhi/Persistence_matrix/columns/small_vector_column.h +1093 -0
  74. multipers/gudhi/gudhi/Persistence_matrix/columns/unordered_set_column.h +1012 -0
  75. multipers/gudhi/gudhi/Persistence_matrix/columns/vector_column.h +1244 -0
  76. multipers/gudhi/gudhi/Persistence_matrix/matrix_dimension_holders.h +186 -0
  77. multipers/gudhi/gudhi/Persistence_matrix/matrix_row_access.h +164 -0
  78. multipers/gudhi/gudhi/Persistence_matrix/ru_pairing.h +156 -0
  79. multipers/gudhi/gudhi/Persistence_matrix/ru_rep_cycles.h +376 -0
  80. multipers/gudhi/gudhi/Persistence_matrix/ru_vine_swap.h +540 -0
  81. multipers/gudhi/gudhi/Persistent_cohomology/Field_Zp.h +118 -0
  82. multipers/gudhi/gudhi/Persistent_cohomology/Multi_field.h +173 -0
  83. multipers/gudhi/gudhi/Persistent_cohomology/Persistent_cohomology_column.h +128 -0
  84. multipers/gudhi/gudhi/Persistent_cohomology.h +745 -0
  85. multipers/gudhi/gudhi/Points_off_io.h +171 -0
  86. multipers/gudhi/gudhi/Simple_object_pool.h +69 -0
  87. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_iterators.h +463 -0
  88. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h +83 -0
  89. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_siblings.h +106 -0
  90. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_star_simplex_iterators.h +277 -0
  91. multipers/gudhi/gudhi/Simplex_tree/hooks_simplex_base.h +62 -0
  92. multipers/gudhi/gudhi/Simplex_tree/indexing_tag.h +27 -0
  93. multipers/gudhi/gudhi/Simplex_tree/serialization_utils.h +62 -0
  94. multipers/gudhi/gudhi/Simplex_tree/simplex_tree_options.h +157 -0
  95. multipers/gudhi/gudhi/Simplex_tree.h +2794 -0
  96. multipers/gudhi/gudhi/Simplex_tree_multi.h +163 -0
  97. multipers/gudhi/gudhi/distance_functions.h +62 -0
  98. multipers/gudhi/gudhi/graph_simplicial_complex.h +104 -0
  99. multipers/gudhi/gudhi/persistence_interval.h +253 -0
  100. multipers/gudhi/gudhi/persistence_matrix_options.h +170 -0
  101. multipers/gudhi/gudhi/reader_utils.h +367 -0
  102. multipers/gudhi/mma_interface_coh.h +255 -0
  103. multipers/gudhi/mma_interface_h0.h +231 -0
  104. multipers/gudhi/mma_interface_matrix.h +282 -0
  105. multipers/gudhi/naive_merge_tree.h +575 -0
  106. multipers/gudhi/scc_io.h +289 -0
  107. multipers/gudhi/truc.h +888 -0
  108. multipers/io.cp310-win_amd64.pyd +0 -0
  109. multipers/io.pyx +711 -0
  110. multipers/ml/__init__.py +0 -0
  111. multipers/ml/accuracies.py +90 -0
  112. multipers/ml/convolutions.py +520 -0
  113. multipers/ml/invariants_with_persistable.py +79 -0
  114. multipers/ml/kernels.py +176 -0
  115. multipers/ml/mma.py +714 -0
  116. multipers/ml/one.py +472 -0
  117. multipers/ml/point_clouds.py +346 -0
  118. multipers/ml/signed_measures.py +1589 -0
  119. multipers/ml/sliced_wasserstein.py +461 -0
  120. multipers/ml/tools.py +113 -0
  121. multipers/mma_structures.cp310-win_amd64.pyd +0 -0
  122. multipers/mma_structures.pxd +127 -0
  123. multipers/mma_structures.pyx +2746 -0
  124. multipers/mma_structures.pyx.tp +1085 -0
  125. multipers/multi_parameter_rank_invariant/diff_helpers.h +93 -0
  126. multipers/multi_parameter_rank_invariant/euler_characteristic.h +97 -0
  127. multipers/multi_parameter_rank_invariant/function_rips.h +322 -0
  128. multipers/multi_parameter_rank_invariant/hilbert_function.h +769 -0
  129. multipers/multi_parameter_rank_invariant/persistence_slices.h +148 -0
  130. multipers/multi_parameter_rank_invariant/rank_invariant.h +369 -0
  131. multipers/multiparameter_edge_collapse.py +41 -0
  132. multipers/multiparameter_module_approximation/approximation.h +2295 -0
  133. multipers/multiparameter_module_approximation/combinatory.h +129 -0
  134. multipers/multiparameter_module_approximation/debug.h +107 -0
  135. multipers/multiparameter_module_approximation/euler_curves.h +0 -0
  136. multipers/multiparameter_module_approximation/format_python-cpp.h +286 -0
  137. multipers/multiparameter_module_approximation/heap_column.h +238 -0
  138. multipers/multiparameter_module_approximation/images.h +79 -0
  139. multipers/multiparameter_module_approximation/list_column.h +174 -0
  140. multipers/multiparameter_module_approximation/list_column_2.h +232 -0
  141. multipers/multiparameter_module_approximation/ru_matrix.h +347 -0
  142. multipers/multiparameter_module_approximation/set_column.h +135 -0
  143. multipers/multiparameter_module_approximation/structure_higher_dim_barcode.h +36 -0
  144. multipers/multiparameter_module_approximation/unordered_set_column.h +166 -0
  145. multipers/multiparameter_module_approximation/utilities.h +419 -0
  146. multipers/multiparameter_module_approximation/vector_column.h +223 -0
  147. multipers/multiparameter_module_approximation/vector_matrix.h +331 -0
  148. multipers/multiparameter_module_approximation/vineyards.h +464 -0
  149. multipers/multiparameter_module_approximation/vineyards_trajectories.h +649 -0
  150. multipers/multiparameter_module_approximation.cp310-win_amd64.pyd +0 -0
  151. multipers/multiparameter_module_approximation.pyx +217 -0
  152. multipers/pickle.py +53 -0
  153. multipers/plots.py +334 -0
  154. multipers/point_measure.cp310-win_amd64.pyd +0 -0
  155. multipers/point_measure.pyx +320 -0
  156. multipers/simplex_tree_multi.cp310-win_amd64.pyd +0 -0
  157. multipers/simplex_tree_multi.pxd +133 -0
  158. multipers/simplex_tree_multi.pyx +10335 -0
  159. multipers/simplex_tree_multi.pyx.tp +1935 -0
  160. multipers/slicer.cp310-win_amd64.pyd +0 -0
  161. multipers/slicer.pxd +2371 -0
  162. multipers/slicer.pxd.tp +214 -0
  163. multipers/slicer.pyx +15467 -0
  164. multipers/slicer.pyx.tp +914 -0
  165. multipers/tbb12.dll +0 -0
  166. multipers/tbbbind_2_5.dll +0 -0
  167. multipers/tbbmalloc.dll +0 -0
  168. multipers/tbbmalloc_proxy.dll +0 -0
  169. multipers/tensor/tensor.h +672 -0
  170. multipers/tensor.pxd +13 -0
  171. multipers/test.pyx +44 -0
  172. multipers/tests/__init__.py +57 -0
  173. multipers/tests/test_diff_helper.py +73 -0
  174. multipers/tests/test_hilbert_function.py +82 -0
  175. multipers/tests/test_mma.py +83 -0
  176. multipers/tests/test_point_clouds.py +49 -0
  177. multipers/tests/test_python-cpp_conversion.py +82 -0
  178. multipers/tests/test_signed_betti.py +181 -0
  179. multipers/tests/test_signed_measure.py +89 -0
  180. multipers/tests/test_simplextreemulti.py +221 -0
  181. multipers/tests/test_slicer.py +221 -0
  182. multipers/torch/__init__.py +1 -0
  183. multipers/torch/diff_grids.py +217 -0
  184. multipers/torch/rips_density.py +304 -0
  185. multipers-2.2.3.dist-info/LICENSE +21 -0
  186. multipers-2.2.3.dist-info/METADATA +134 -0
  187. multipers-2.2.3.dist-info/RECORD +189 -0
  188. multipers-2.2.3.dist-info/WHEEL +5 -0
  189. multipers-2.2.3.dist-info/top_level.txt +1 -0
multipers/io.cp310-win_amd64.pyd ADDED
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