mrio-toolbox 1.1.1__py3-none-any.whl → 1.1.3__py3-none-any.whl

mrio_toolbox/mrio.py

@@ -1,899 +0,0 @@
-# -*- coding: utf-8 -*-
-"""
-This module provides the MRIO class.
-
-Created on Thu Mar 30 10:42:23 2023
-@author: beaufils
-"""
-
-import os
-import numpy as np
-import logging
-import xarray as xr
-import pandas as pd
-from mrio_toolbox._parts import Part
-from mrio_toolbox.utils import converters
-from mrio_toolbox.utils.loaders import make_loader
-from mrio_toolbox.utils.savers import save_mrio_to_folder,save_to_nc
-from mrio_toolbox.utils.formatting import formatter
-
-log = logging.getLogger(__name__)
-
-class MRIO:
-    """
-    Representation of an MRIO table
-
-    An MRIO table holds a collection of Parts, each representing a different aspect 
-    of the table (e.g., inter-industry matrix, final demand, satellite accounts, etc).
-    The MRIO instance allows performing basic operations on the table, such as
-    loading parts, setting groupings, filtering, aggregating, and saving data.
-
-    Instance variables
-    ------------------
-    metadata : dict
-        Dictionary storing the metadata of the MRIO table.
-    labels : dict
-        Labels of the table parts, including:
-            - List of countries
-            - List of sectors
-    groupings : dict
-        Groupings of the MRIO table. Groupings are used to group labels into 
-        larger categories (e.g., countries into zones, sectors into aggregate 
-        sectors). These groupings are primarily used for visualization or 
-        aggregation purposes.
-    c : int
-        Number of countries in the table.
-    s : int
-        Number of sectors in the table.
-    parts : dict of Part objects
-        Dictionary containing the different parts of the MRIO table.
-
-    Methods
-    -------
-    __init__(**kwargs):
-        Initialize an MRIO instance from a file or explicit parameters.
-    load_part(update_part=True, standalone=False, **kwargs):
-        Load a Part object into the MRIO table.
-    set_groupings(groupings=None):
-        Set the groupings of the MRIO table.
-    filter(threshold, fill_value=0):
-        Filter the MRIO table by removing values below a specified threshold.
-    add_part(part, name=None, update_part=True):
-        Add a Part object to the MRIO table.
-    new_part(data=None, name="part", dimensions=None, fill_value=0.0, **kwargs):
-        Create a new Part object from data or dimensions.
-    add_dimensions(dimensions):
-        Add new dimensions to the MRIO table.
-    add_labels(new_indices, dimension, fill_value=0.0):
-        Add items to a label of the MRIO instance.
-    replace_labels(name, new_labels):
-        Replace labels for one or more dimensions in all MRIO parts.
-    rename_dimensions(old_names, new_names):
-        Rename the names of the dimensions in the MRIO table.
-    aggregate(on="sectors"):
-        Aggregate the MRIO table on a given dimension.
-    has_neg(parts=None):
-        Check whether some parts of the MRIO table have negative values.
-    copy():
-        Create a copy of the MRIO object.
-    save(file, name=None, extension="npy", overwrite=False, **kwargs):
-        Save the current MRIO instance to a file or folder.
-    to_xarray():
-        Convert the MRIO instance to an xarray Dataset.
-
-    Notes
-    -----
-    This class provides a comprehensive interface for working with MRIO tables,
-    including loading, modifying, and saving data, as well as performing 
-    operations like filtering and aggregation.
-    """
-    
-    def __init__(self,**kwargs):
-        """
-        Initialize an MRIO instance.
-
-        There are multiple ways to initialize an MRIO instance:
-            - From a `.nc` file: Provide the "file" parameter with the path to the file.
-            - From explicit parameters: Provide the data, labels, and metadata explicitly.
-            - From a `.yaml` file: Provide the "file" parameter with the path to a `.yaml` file 
-              containing loading instructions.
-
-        If no arguments are provided, an empty MRIO instance is created.
-
-        Parameters
-        ----------
-        file : str, optional
-            Path to the file to load the MRIO table from. If a `.yaml` file is provided, 
-            it is interpreted as loading instructions.
-        data : dict, xarray.DataArray, xarray.Dataset, or pandas.DataFrame, optional
-            Data to initialize the MRIO instance. If provided, the instance is created 
-            from this data.
-        kwargs : dict
-            Additional parameters for initializing the MRIO instance.
-
-        Raises
-        ------
-        ValueError
-            If the provided data type is not supported for initializing the MRIO instance.
-            
-        Notes
-        -----
-        The "data" parameter is reserved for setting an MRIO instance from a dictionary.
-        It is intended for internal use only.
-        """
-        
-        if not kwargs:
-            #Create an empty MRIO instance
-            kwargs = {
-                "data" : dict()
-            }
-        if "data" in kwargs:
-            data = kwargs.pop("data")
-            if isinstance(data,dict):
-                log.info("Create MRIO from dict")
-                self.parts,self.labels,self.metadata,self.groupings = dict(),dict(),dict(),dict()
-                self.__dict__.update(data)
-                
-                for part in self.parts:
-                    self._update_labels(
-                        self.parts[part],
-                        update_part=False
-                        )
-                self.metadata.update(kwargs)
-                self.loader = make_loader()
-                return
-            if isinstance(data,(xr.DataArray,xr.Dataset)):
-                if isinstance(data,xr.DataArray):
-                    data = data.to_dataset()
-                mrio_data,to_load = converters.xarray.make_mrio(data,**kwargs)
-                self.__init__(data=mrio_data)
-                for part in to_load:
-                    self.add_part(data[part])
-                return
-            if isinstance(data,pd.DataFrame):
-                self.__init__(data=kwargs)
-                self.add_part(data)
-                return
-            raise ValueError(f"Cannot create an MRIO instance from type: {type(data)}")
-            
-        
-        file = kwargs.pop("file",None)
-        #Initialize the loader
-        self.loader = make_loader(file=file,**kwargs)
-
-        #Load basic MRIO data
-        self.metadata = self.loader.metadata
-        self.labels = self.loader.labels
-        self.groupings = self.loader.groupings
-
-        #Initialize the parts
-        self.parts = dict()
-        available_parts = self.loader.available_parts(
-                extension = kwargs.get("extension",None)
-            )
-        
-        to_load = {part:part for part in available_parts}
-        if "part_settings" in self.loader.__dict__ and bool(self.loader.part_settings):
-            to_load = dict()
-            for part in self.loader.part_settings.keys():
-                to_load[part] = self.loader.part_settings[part].get("file_name",part)
-
-        for part in to_load.keys():
-            if to_load[part] not in available_parts:
-                log.warning(f"Part {part} not found in available parts")
-                continue
-            kwargs["name"] = part
-            kwargs["file_name"] = to_load[part]
-            self.load_part(**kwargs)
-        
-        if "countries" in self.labels:
-            self.c = len(self.labels["countries"])
-        if "sectors" in self.labels:
-            self.s = len(self.labels["sectors"])
-
-    def load_part(self,
-                  update_part = True,
-                  standalone=False,
-                  **kwargs):
-        """
-        Load a Part object into the MRIO table
-
-        By default, the Part is loaded using the current loader.
-
-        Parameters
-        ----------
-        update_part : bool, optional
-            The groupings and labels of the Part are updated based on the MRIO attributes.
-        standalone : bool, optional
-            Whether to load the Part as a standalone object.
-            The default is False.
-        kwargs : dict
-            Additional arguments to pass to the Part loader.
-        """
-        name = kwargs.get("name","new_part")
-        try:
-            log.debug(f"Try loading part {name} from the current loader")
-            part = self.loader.load_part(**kwargs)
-        except FileNotFoundError:
-            log.info(f"Part {name} not found with the current loader")
-            log.debug(f"Try resetting the loader")
-            loader = make_loader(**kwargs)
-            part = loader.load_part()
-        part = Part(**part)
-        if standalone:
-            return part
-        log.info(f"Add part {part.name} to MRIO table")
-        self.add_part(part,update_part=update_part)
-        
-    def _update_labels(self,part,update_part=True):
-        """
-        Update the labels of the MRIO table with the labels of a Part object
-
-        If all the labels of the Part are already in the MRIO labels,
-        the method does nothing.
-        This method is run after adding a new Part to the MRIO table.
-
-        Parameters
-        ----------
-        part : Part object
-            Part object to use for the update.
-        update_part : bool, optional
-            If True and the Part labels are not properly set,
-            tries to update the Part labels based on the MRIO labels.
-        """
-        part_labels = part.get_labels()
-        log.debug(f"Update labels of MRIO table with {part.name}")  
-        for labels in part_labels:
-            for label in labels.keys():
-                if isinstance(label,int):
-                    log.debug(f"Skip numerical label in {part.name}")
-                    if update_part:
-                        log.debug(f"Try to update labels of {part.name}")
-                        labels[label] = self._get_labels(
-                            len(labels[label])
-                            )
-                    continue #Skip unkwnown labels
-                if label not in self.labels.keys():
-                    self.labels[label] = labels[label]
-                    log.info(f"Add label {label} to MRIO table")
-        if update_part:
-            part.set_labels(part_labels)
-
-    def _get_labels(self,l):
-        """
-        Find the labels fitting an axis with a given shape
-        
-        Available labels:
-        
-            - countries and sectors
-            - countries
-            - zones and sectors
-            - zones
-            - sectors
-            
-        If no fitting label is found, data are labelled numerically
-
-        Parameters
-        ----------
-        l : int
-            Length of the data dimension.
-
-        Returns
-        -------
-        dict of str:list of str
-            Labels of the axis.
-
-        """
-        if l==1:
-            return (["all"])
-        log.debug("Try to infer label from axis of length "+str(l))
-        for label in self.labels:
-            #Look whether a basic label fits the axis
-            if l == len(self.labels[label]):
-                log.debug(f"Label {label} fits axis of length {l}")
-                return {label:self.labels[label]}
-        for grouping in self.groupings:
-            #Look whether a grouped label fits the axis
-            if l == len(self.groupings[grouping]):
-                log.debug(f"Label {label} fits axis of length {l}")
-                return {grouping:list(self.groupings[grouping]).keys()}
-        log.warning("No label found for axis of length "+str(l))
-        return {0:[i for i in range(l)]}
-
-    
-    def set_groupings(self,groupings=None):
-        """Set the groupings of the MRIO table
-        
-        Groupings are used to group labels into larger categories 
-        (e.g countries into zones, sectors in aggregate sectors).
-        Groupings have in principle no impact on the resolution of the table
-        but can be used for visualization or aggregation purposes.
-
-        Groupings should be disjoint, but this is not enforced.
-        Nested groupings are not supported.
-
-        Unspecified groupings are set to the identity.
-        Calling the method without arguments resets the groupings to the identity.
-
-        Parameters
-        ----------
-        groupings : dict of dict, optional
-            Groupings of the MRIO table.
-            The default is None.
-            If None, the groupings are set to the identity.
-            Groupings should be provided as a dict of dict::
-            
-                {dimension : {group : [items]}}
-                
-            where dimension is the name of the label to group,
-            group is the name of the group,
-            and items is a list of items to group.
-        """
-        if groupings is None:
-            groupings = {label:dict() for label in self.labels.keys()}
-            self.set_groupings(groupings)
-        for key in groupings.keys():
-            labels = self.labels[key]
-            covered = []
-            for group in list(groupings[key]):
-                for item in list(groupings[key][group]):
-                    if item not in labels:
-                        log.warning(
-                            f"Item {item} not found in {key} labels"
-                            )
-                        groupings[key][group].remove(item)
-                    else:
-                        covered.append(item)
-                if len(groupings[key][group]) == 0:
-                    log.warning(f"Group {group} is empty")
-                    groupings[key].pop(group)
-            for item in labels:
-                if item not in covered:
-                    groupings[key][item] = [item]
-            self.groupings[key] = groupings[key]
-        self._update_groupings()
-        self.loader.set_groupings(self.groupings)
-    
-    def _update_groupings(self):
-        """
-        Update the groupings of all Parts of the MRIO instance
-        """
-        for part in self.parts.keys():
-            self.parts[part].update_groupings(self.groupings)
-        self.groups = {
-            groups : list(self.groupings[groups].keys()) for groups in self.groupings
-            } #Save name of groups for each dimension
-    
-    def filter(self,threshold,fill_value=0):
-        """
-        Filter the MRIO table by removing values below a threshold
-        
-        Parameters
-        ----------
-        threshold : float
-            Value below which the values are set to 0.
-        fill_value : float, optional
-            Value to use to fill the table if only dimensions are given.
-        
-        Returns
-        -------
-        None.
-        """
-        for part in self.parts.keys():
-            self.parts[part] = self.parts[part].filter(threshold,fill_value)
-    
-    def add_part(self,
-                 part,
-                 name=None,
-                 update_part=True):
-        """
-        Add a Part object to the MRIO table
-        
-        Parameters
-        ----------
-        part : Part object
-            Part object to add to the MRIO table.
-        update_part : bool, optional
-            Whether to update the labels of the Part object.
-            The default is True.
-        """
-        if not isinstance(part,Part):
-            #Cast the data into a Part object
-            part=Part(part)
-        if name is None:
-            name = part.name
-        log.info(f"Add part {name} to MRIO table")
-        self._update_labels(part,update_part)
-        if update_part:
-            part.update_groupings(self.groupings)
-            for metadata in self.metadata:
-                if metadata not in part.metadata:
-                    part.metadata[metadata] = self.metadata[metadata]
-        self.parts[name] = part
-                
-    def new_part(self,
-                 data=None,
-                 name="part",
-                 dimensions=None,
-                 fill_value=0.0,
-                 **kwargs):
-        """Cast part data into the corresponding Part Object
-        
-        Parameters
-        ----------
-        data : np.ndarray, optional
-            Data to load in the Part. The default is None.
-            If None, the dimensions argument is used to create an empty Part.
-        name : str, optional
-            Name of the Part. The default is "part".
-        dimensions or labels : list of str, list of ints, str, list of dicts, optional
-            Labels of the Part. 
-            Either of these formats are accepted:
-            
-                - Dictionary of explicit labels for each axis
-                - List of explicit labels for each axis
-                - List of existing dimension names
-                
-            If None, the labels are inferred from the data shape.
-        multiplier : str, optional
-            multiplier of the data. The default is None.
-        unit : float, optional
-            Unit of the data. The default is 1.
-        fill_value : float, optional
-            Value to use to fill the table if only dimensions are given.
-
-        Returns
-        -------
-        Part instance
-        """
-        def unpack_dimensions(self,dimensions):
-            """Unpack the dimensions argument"""
-            if isinstance(dimensions,dict):
-                return dimensions
-            if isinstance(dimensions,str):
-                #Try to get the dimensions from the current labels or groupings
-                if dimensions in self.labels.keys():
-                    return {dimensions:self.labels[dimensions]}
-                if dimensions in self.groupings.keys():
-                    return {dimensions:list(self.groupings[dimensions])}
-                log.warning(f"Dimension {dimensions} not found in labels or groupings\n"+\
-                            " Available dimensions are "+str(self.labels.keys()))
-                raise ValueError(f"Invalid dimension {dimensions}")
-            if isinstance(dimensions,int):
-                #Try to infer the dimension from the length of the data
-                return self._get_labels(dimensions)
-            if isinstance(dimensions,(list,tuple)):
-                try:
-                    #Try to unpack nested dimensions
-                    output = dict()
-                    for dim in dimensions:
-                        output.update(unpack_dimensions(self,dim))
-                    return output
-                except ValueError:
-                    #Otherwise assume the labels were given as a list
-                    return {0:dimensions}
-            raise TypeError(f"Invalid type for dimensions {type(dimensions)}")
-        
-        dimensions = kwargs.get("dimensions",dimensions)
-        if dimensions is None:
-            dimensions = kwargs.get("labels",None)
-        if data is None:
-            #Create a Part from the dimensions only
-            if dimensions is None:
-                raise ValueError("No data nor dimensions provided")
-            
-            if isinstance(dimensions,(int,str)):
-                #Ensure dimensions are iterable
-                dimensions = [dimensions]
-            labels = []
-            for dim in dimensions:
-                labels.append(unpack_dimensions(self,dim))
-            dims = len(labels)
-            shape = []
-            for dim in range(dims):
-                #Recursively compute the shape of the table
-                length = 1
-                for label in labels[dim]:
-                    length *= len(labels[dim][label])
-                shape.append(length)
-            data = np.full(shape,fill_value=fill_value)
-
-        elif dimensions is None:
-            #Infer the dimensions from the data shape
-            labels = []
-            for dimension in range(data.ndim):
-                labels.append(
-                    self._get_labels(data.shape[dimension])
-                    )
-
-        else:
-            #Reformat the dimensions
-            labels = []
-            if isinstance(dimensions,(int,str)):
-                #Ensure dimensions are iterable
-                dimensions = [dimensions]
-            for dim in dimensions:
-                labels.append(unpack_dimensions(self,dim))
-
-        return Part(data=data,
-                    name=name,
-                    groupings = self.groupings,
-                    labels = labels,
-                    **kwargs)
-
-    def add_dimensions(self,dimensions):
-        """
-        Add dimensions to the MRIO table
-
-        Parameters
-        ----------
-        dimensions : dict
-            Description of the dimension to add.
-        """
-        for dimension in dimensions.keys():
-            log.info("Add dimension "+dimension+" to MRIO table")
-            # check whether the dimension is already in the labels
-            if dimension in self.labels.keys():
-                log.info(f"Dimension {dimension} already exists in MRIO labels")
-                if dimensions[dimension] != self.labels[dimension]:
-                    log.warning(f"There already exist different or differently ordered labels for dimension '{dimension}' in the MRIO labels. "+ 
-                                "You are now overwriting them which leads to inconsistent labels in the parts of your MRIO table!")
-            
-            if isinstance(dimensions[dimension],str):
-                #For single item dimensions, convert to list
-                dimensions[dimension] = [dimensions[dimension]]
-            self.labels[dimension] = dimensions[dimension]
-
-    def check_label_consistency(self):
-        """
-        Check whether the labels of of all parts of the MRIO table are consistent.
-        """
-        
-        for part in self.parts.keys():
-            for key, labels in self.parts[part].labels.items():
-                if key in self.labels.keys():
-                    if labels != self.labels[key]: 
-                        log.warning(f"Labels for dimension'{key}' in part '{part}' are inconsistent with MRIO labels")
-                        return False
-                else: 
-                    log.warning(f"Label {key} not found in MRIO labels")
-                    return False
-        return True
-    
-    def add_labels(self,new_indices,dimension,
-                   fill_value=0.0):
-        """
-        Add items to a label of the MRIO instance
-
-        All Parts are updated automatically with the given fill_value
-
-        Parameters
-        ----------
-        new_indices : list of str
-            items to add to the label
-        dimension : str
-            name of the labels to which the new indices should be added
-        fill_value : float, optional
-            Value to use to fill the newly created label fields in the tables.
-        """
-        log.info(f"Add labels {str(new_indices)} to dimension "+dimension)
-        for part in self.parts.keys():
-            self.parts[part] = self.parts[part].add_labels(
-                new_indices,dimension=dimension,
-                fill_value=fill_value
-            )
-        self.labels[dimension] += new_indices
-        if dimension == "countries":
-            self.c = len(self.labels[dimension])
-        if dimension == "sectors":
-            self.s = len(self.labels[dimension])
-        if "x" in self.parts.keys():
-            x = self.x.data
-            x[x==0] = 1
-        self.loader.set_labels(self.labels)
-
-    def replace_labels(self,name,new_labels):
-        """
-        Replace labels for one or more dimensions in all MRIO parts. 
-
-        Parameters
-        ----------
-        name : str or list of str
-            Name of the dimension for which the labels should be replaced 
-        new_labels : list of str or dict of list of str
-            New labels for given dimension in the labels dictionary.
-        """
-        log.info(f"Replace labels for {name}")
-        if isinstance(name,str):
-            self._replace_individual_labels(name = name, new_labels = new_labels)
-        elif isinstance(name,list):
-            for dimension in name:
-                if isinstance(new_labels,list):
-                    raise ValueError("You provided multiple dimensions but only one set of new labels.")
-                elif isinstance(new_labels,dict):
-                    new_labels = new_labels[dimension]
-                else: 
-                    raise TypeError(f"Invalid type for new labels: {type(new_labels)}")
-                self._replace_individual_labels(dimension,new_labels)
-         
-    def _replace_individual_labels(self,name, new_labels): # check for usages and update them
-        """
-        Replace labels for one dimension in all MRIO parts. 
-
-        Parameters
-        ----------
-        name : str
-            Name of the labels to replace. Usually this is 'countries', 'sectors', 'va_labs' or 'y_labs'
-        new_labels : list of str
-            New labels for given name in the label dictionary.
-        """
-        log.info(f"Replace labels for {name}")
-        if name not in self.labels.keys():
-            log.warning(f"Label {name} is not in MRIO labels and cannot be replaced.")
-            return
-        for part in self.parts.keys():
-            self.parts[part].replace_labels(name, new_labels)
-        self.loader.set_labels(self.labels)
-        self.labels[name] = new_labels
-        
-        if name in self.groupings.keys():
-            log.warning("Groupings for all dimensions are reset to identity, because the labels have changed.\n \
-                        Please update the groupings manually if needed.")
-            self.set_groupings(groupings=None)
-
-    def rename_dimensions(self,old_names,new_names):
-        """
-        Rename the names of the dimensions.
-        
-        The keys of the label dicts for the MRIO instance are renamed.
-        The content of the labels and the groupings is conserved. 
-
-        Parameters
-        ----------
-        old_names : str or list of str
-            Labels to rename.
-        new_names : str or list of str
-            New names for the labels.
-        """
-        if isinstance(old_names,str):
-            old_names = [old_names]
-        if isinstance(new_names,str):
-            new_names = [new_names]
-        for old,new in zip(old_names,new_names):
-            log.info(f"Rename label {old} to {new}")
-            
-            if old in self.labels.keys():
-                self.labels = {new if key == old else key : value for key, value in self.labels.items()}
-            else:
-                log.warning(f"Label {old} is not in MRIO labels and cannot be renamed.")
-                continue
-            if old in self.groupings.keys():
-                self.groupings = {new if key == old else key : value for key, value in self.groupings.items()}
-            for part in self.parts.keys():
-                self.parts[part].rename_labels(old,new)
-                
-    def reorder_data(self, new_labels):
-        """
-        Reorder the data of the MRIO instance based on new labels.
-
-        This method is used to reorder the data of the MRIO instance based on the new labels.
-        The new labels should be a dictionary with the same keys and items as the old mrio labels
-        but the keys and items can be in a different order. The data of the part is then reordered
-        to fit the new labels.
-
-        Parameters
-        ----------
-        new_labels : dict
-            New labels to use for reordering.
-        """
-        log.info("Reorder MRIO data with new labels")
-        old_labels = self.labels
-        if not isinstance(new_labels,dict):
-            raise TypeError(f"Invalid type for new labels: {type(new_labels)}. Expected a dict.")
-        if not set(new_labels.keys()).issubset(set(old_labels.keys())):
-            raise ValueError("You are trying to reorder data for dimensions that are not present in your MRIO instance")
-        
-        for part in self.parts.keys():
-            new_part_labels = {}
-            for key, labels in new_labels.items():
-                if key in self.parts[part].labels.keys():
-                    new_part_labels[key] = labels
-            self.parts[part].reorder_data(new_part_labels)
-                    
-        for key in new_labels.keys():
-            self.replace_labels(key, new_labels[key])
-
-
-
-    def aggregate(self,on="sectors"):
-        """Aggregate the MRIO table on a given dimension
-        
-        The aggregation is performed by summing the values of the table
-        for the items that are grouped together.
-
-        Parameters
-        ----------
-        on : str, optional
-            Name of the dimension to aggregate on. 
-            The default is "sectors".
-
-        Returns
-        -------
-        None.
-
-        """
-        if on == "all":
-            on = list(self.groupings.keys())
-        if isinstance(on,list):
-            for item in on:
-                self.aggregate(item)
-            return
-        log.info(f"Aggregate MRIO on {on}")
-        if on not in self.labels.keys():
-            raise ValueError(f"Invalid dimension {on}")
-        if on not in self.groupings.keys():
-            raise ValueError(f"No groupings defined for dimensions {on}")
-        
-        new_groupings = {
-            item : [item] for item in self.groupings[on]
-        }
-        new_labels = [item for item in self.groupings[on]]
-
-        for part in self.parts.keys():
-            self.parts[part] = self.parts[part].aggregate(on)
-
-        self.groupings[on] = new_groupings
-        self.labels[on] = new_labels
-        
-        if on == "countries":
-            self.c = len(self.labels[on])
-        if on == "sectors":
-            self.s = len(self.labels[on])
-
-        self.loader.set_groupings(self.groupings)
-        self.loader.set_labels(self.labels)
-    
-    def __getattr__(self,name):
-        selset = [
-            self.parts,
-            self.labels,
-            self.metadata
-            ]
-        for sel in selset:
-            try:
-                return sel[name]
-            except:
-                pass
-        raise AttributeError(f"Attribute {name} not found")
-    
-    def __setattr__(self,name,value):
-        if isinstance(value,Part):
-            self.add_part(value,name=name)
-        elif isinstance(value,np.ndarray):
-            self.add_part(self.new_part(value,name))
-        else:
-            super().__setattr__(name,value)
-    
-    def __str__(self):
-        s = ["MRIO object: "+ ' '.join(self.metadata.values())]
-        s.append("")
-        s.append("Parts currently loaded:")
-        s.append("   " + ", ".join(self.parts.keys()))
-        return "\n".join(s)
-    
-    def has_neg(self,parts=None):
-        """Check whether some Parts have negative values
-
-        Parameters
-        ----------
-        parts : str, list of str or None, optional
-            List of parts to inspect. 
-            If left empty, all parts are inspected.
-
-        Returns
-        -------
-        bool
-        """
-        if isinstance(parts,str):
-            parts = [parts]
-        elif parts is None:
-            parts = self.parts.keys()
-        for part in parts:
-            if self.parts[part].hasneg():
-                return True
-        return False
-    
-    def copy(self):
-        """Create a copy of the MRIO object"""
-        return MRIO(data=self.__dict__)
-    
-    def save(self,
-             file=None,
-             name=None,
-             extension = ".nc",
-             overwrite=False,
-             **kwargs):
-        """
-        Save the current MRIO instance
-
-        If the path points to a folder, the MRIO parts can be saved as:
-            - .npy
-            - .csv
-            - .txt
-            - .xlsx
-            
-        Labels are saved as .txt files and metadata as a .yaml file.
-
-        Otherwise the MRIO instance is saved as a .nc file.
-
-        Parameters
-        ----------
-        file : str
-            Full path to the file or folder to save the MRIO instance into.
-            If a file is provided, the extension is used to determine the format.
-        extension : str, optional
-            Extension of the file to save the MRIO instance into.
-            This is only used if the file is a folder.
-        overwrite : bool, optional
-            Whether to overwrite the existing file. The default is False.
-            If False, the version name is iterated until a non-existing
-            file name is found.
-        kwargs : dict
-            Additional arguments to pass to the saver.
-        """
-        if file is None:
-            if file is None:
-                name = self.metadata.get("name","mrio")
-            file = name
-        file_extension = os.path.splitext(file)[1]
-        if file_extension == "" and extension == ".nc":
-            file = os.path.join(file+".nc")
-            file_extension = ".nc"
-        if file_extension == "":
-            #If the file is a folder, save in folder
-            save_mrio_to_folder(
-                self,
-                file,
-                name=name,
-                extension=extension,
-                overwrite=overwrite,
-                **kwargs
-                )
-        elif file_extension == ".nc":
-            #If the file is a .nc, save the tables
-            save_to_nc(self,file,overwrite,**kwargs)
-        else:
-            raise NotImplementedError(f"Cannot save MRIO in {file_extension} format")
-    
-    def to_xarray(self):
-        """
-        Convert the MRIO instance to an xarray Dataset
-        """
-        return converters.xarray.to_DataSet(self)
-    
-    def reallocate_negatives(self,**kwargs):
-        formatter.reallocate_negatives(self,**kwargs)
-
-    def adjust_intermediates(self,**kwargs):
-        formatter.adjust_intermediates(self,**kwargs)
-
-    def fill_empty_rows(self,**kwargs):
-        formatter.fill_empty_rows(self,**kwargs)
-
-    def balance_va(self,**kwargs):
-        formatter.balance_va(self,**kwargs)
-
-    def compute_technical_coefficients(self,**kwargs):
-        formatter.compute_technical_coefficients(self,**kwargs)
-
-    def compute_leontief(self,**kwargs):
-        formatter.compute_leontief(self,**kwargs)
-
-    def preprocess(self,**kwargs):
-        formatter.preprocess(self,**kwargs)
-
-    def rename_part(self,old_name,new_name):
-        formatter.rename_part(self,old_name,new_name)
-
-    def rename_parts(self,renaming_dict):
-        formatter.rename_parts(self,renaming_dict)