monai-weekly 1.5.dev2509__py3-none-any.whl → 1.5.dev2511__py3-none-any.whl

tests/networks/nets/test_swin_unetr.py

@@ -128,7 +128,7 @@ class TestSWINUNETR(unittest.TestCase):
                     data_spec["url"], weight_path, hash_val=data_spec["hash_val"], hash_type=data_spec["hash_type"]
                 )
 
-                ssl_weight = torch.load(weight_path)["model"]
+                ssl_weight = torch.load(weight_path, weights_only=True)["model"]
                 net = SwinUNETR(**input_param)
                 dst_dict, loaded, not_loaded = copy_model_state(net, ssl_weight, filter_func=filter_swinunetr)
                 assert_allclose(dst_dict[key][:8], value, atol=1e-4, rtol=1e-4, type_test=False)

tests/networks/nets/test_transformer.py

@@ -101,7 +101,7 @@ class TestDecoderOnlyTransformer(unittest.TestCase):
             weight_path = os.path.join(tmpdir, filename)
             download_url(url=url, filepath=weight_path, hash_val=hash_val, hash_type=hash_type)
 
-            net.load_old_state_dict(torch.load(weight_path), verbose=False)
+            net.load_old_state_dict(torch.load(weight_path, weights_only=True), verbose=False)
 
 
 if __name__ == "__main__":

tests/networks/schedulers/test_scheduler_rflow.py

@@ -0,0 +1,105 @@
+# Copyright (c) MONAI Consortium
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#     http://www.apache.org/licenses/LICENSE-2.0
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from __future__ import annotations
+
+import unittest
+
+import torch
+from parameterized import parameterized
+
+from monai.networks.schedulers import RFlowScheduler
+from tests.test_utils import assert_allclose
+
+TEST_2D_CASE = []
+for sample_method in ["uniform", "logit-normal"]:
+    TEST_2D_CASE.append(
+        [{"sample_method": sample_method, "use_timestep_transform": False}, (2, 6, 16, 16), (2, 6, 16, 16)]
+    )
+
+for sample_method in ["uniform", "logit-normal"]:
+    TEST_2D_CASE.append(
+        [
+            {"sample_method": sample_method, "use_timestep_transform": True, "spatial_dim": 2},
+            (2, 6, 16, 16),
+            (2, 6, 16, 16),
+        ]
+    )
+
+
+TEST_3D_CASE = []
+for sample_method in ["uniform", "logit-normal"]:
+    TEST_3D_CASE.append(
+        [{"sample_method": sample_method, "use_timestep_transform": False}, (2, 6, 16, 16, 16), (2, 6, 16, 16, 16)]
+    )
+
+for sample_method in ["uniform", "logit-normal"]:
+    TEST_3D_CASE.append(
+        [
+            {"sample_method": sample_method, "use_timestep_transform": True, "spatial_dim": 3},
+            (2, 6, 16, 16, 16),
+            (2, 6, 16, 16, 16),
+        ]
+    )
+
+TEST_CASES = TEST_2D_CASE + TEST_3D_CASE
+
+TEST_FULl_LOOP = [
+    [{"sample_method": "uniform"}, (1, 1, 2, 2), torch.Tensor([[[[-0.786166, -0.057519], [2.442662, -0.407664]]]])]
+]
+
+
+class TestRFlowScheduler(unittest.TestCase):
+    @parameterized.expand(TEST_CASES)
+    def test_add_noise(self, input_param, input_shape, expected_shape):
+        scheduler = RFlowScheduler(**input_param)
+        original_sample = torch.zeros(input_shape)
+        timesteps = scheduler.sample_timesteps(original_sample)
+        noise = torch.randn_like(original_sample)
+        timesteps = torch.randint(0, scheduler.num_train_timesteps, (original_sample.shape[0],)).long()
+        noisy = scheduler.add_noise(original_samples=original_sample, noise=noise, timesteps=timesteps)
+        self.assertEqual(noisy.shape, expected_shape)
+
+    @parameterized.expand(TEST_CASES)
+    def test_step_shape(self, input_param, input_shape, expected_shape):
+        scheduler = RFlowScheduler(**input_param)
+        model_output = torch.randn(input_shape)
+        sample = torch.randn(input_shape)
+        scheduler.set_timesteps(num_inference_steps=100, input_img_size_numel=torch.numel(sample[0, 0, ...]))
+        output_step = scheduler.step(model_output=model_output, timestep=500, sample=sample)
+        self.assertEqual(output_step[0].shape, expected_shape)
+        self.assertEqual(output_step[1].shape, expected_shape)
+
+    @parameterized.expand(TEST_FULl_LOOP)
+    def test_full_timestep_loop(self, input_param, input_shape, expected_output):
+        scheduler = RFlowScheduler(**input_param)
+        torch.manual_seed(42)
+        model_output = torch.randn(input_shape)
+        sample = torch.randn(input_shape)
+        scheduler.set_timesteps(50, input_img_size_numel=torch.numel(sample[0, 0, ...]))
+        for t in range(50):
+            sample, _ = scheduler.step(model_output=model_output, timestep=t, sample=sample)
+        assert_allclose(sample, expected_output, rtol=1e-3, atol=1e-3)
+
+    def test_set_timesteps(self):
+        scheduler = RFlowScheduler(num_train_timesteps=1000)
+        scheduler.set_timesteps(num_inference_steps=100, input_img_size_numel=16 * 16 * 16)
+        self.assertEqual(scheduler.num_inference_steps, 100)
+        self.assertEqual(len(scheduler.timesteps), 100)
+
+    def test_set_timesteps_with_num_inference_steps_bigger_than_num_train_timesteps(self):
+        scheduler = RFlowScheduler(num_train_timesteps=1000)
+        with self.assertRaises(ValueError):
+            scheduler.set_timesteps(num_inference_steps=2000, input_img_size_numel=16 * 16 * 16)
+
+
+if __name__ == "__main__":
+    unittest.main()

tests/networks/test_save_state.py

@@ -64,7 +64,7 @@ class TestSaveState(unittest.TestCase):
             if kwargs is None:
                 kwargs = {}
             save_state(src=src, path=path, create_dir=create_dir, atomic=atomic, func=func, **kwargs)
-            ckpt = dict(torch.load(path))
+            ckpt = dict(torch.load(path, weights_only=True))
             for k in ckpt.keys():
                 self.assertIn(k, expected_keys)