metaflow 2.12.0__py2.py3-none-any.whl → 2.12.2__py2.py3-none-any.whl

metaflow/cli.py

@@ -1,4 +1,5 @@
 import inspect
+import os
 import sys
 import traceback
 from datetime import datetime
@@ -9,11 +10,11 @@ from metaflow._vendor import click
 
 from . import decorators, lint, metaflow_version, namespace, parameters, plugins
 from .cli_args import cli_args
-from .client.core import get_metadata
 from .datastore import FlowDataStore, TaskDataStore, TaskDataStoreSet
 from .exception import CommandException, MetaflowException
 from .graph import FlowGraph
 from .metaflow_config import (
+    DECOSPECS,
     DEFAULT_DATASTORE,
     DEFAULT_ENVIRONMENT,
     DEFAULT_EVENT_LOGGER,
@@ -118,6 +119,26 @@ def logger(body="", system_msg=False, head="", bad=False, timestamp=True, nl=Tru
     click.secho(body, bold=system_msg, fg=LOGGER_BAD_COLOR if bad else None, nl=nl)
 
 
+def config_merge_cb(ctx, param, value):
+    # Callback to:
+    #  - read  the Click auto_envvar variable from both the
+    #    environment AND the configuration
+    #  - merge that value with the value passed in the command line (value)
+    #  - return the value as a tuple
+    # Note that this function gets called even if there is no option passed on the
+    # command line.
+    # NOTE: Assumes that ctx.auto_envvar_prefix is set to METAFLOW (same as in
+    # from_conf)
+
+    # Special case where DECOSPECS and value are the same. This happens
+    # when there is no --with option at the TL and DECOSPECS is read from
+    # the env var. In this case, click also passes it as value
+    splits = DECOSPECS.split()
+    if len(splits) == len(value) and all([a == b for (a, b) in zip(splits, value)]):
+        return value
+    return tuple(list(value) + DECOSPECS.split())
+
+
 @click.group()
 def cli(ctx):
     pass
@@ -618,7 +639,7 @@ def resume(
     resume_identifier=None,
     runner_attribute_file=None,
 ):
-    before_run(obj, tags, decospecs + obj.environment.decospecs())
+    before_run(obj, tags, decospecs)
 
     if origin_run_id is None:
         origin_run_id = get_latest_run_id(obj.echo, obj.flow.name)
@@ -678,7 +699,12 @@ def resume(
     runtime.persist_constants()
     write_file(
         runner_attribute_file,
-        "%s:%s" % (get_metadata(), "/".join((obj.flow.name, runtime.run_id))),
+        "%s@%s:%s"
+        % (
+            obj.metadata.__class__.TYPE,
+            obj.metadata.__class__.INFO,
+            "/".join((obj.flow.name, runtime.run_id)),
+        ),
     )
     if clone_only:
         runtime.clone_original_run()
@@ -716,7 +742,7 @@ def run(
 ):
     if user_namespace is not None:
         namespace(user_namespace or None)
-    before_run(obj, tags, decospecs + obj.environment.decospecs())
+    before_run(obj, tags, decospecs)
 
     runtime = NativeRuntime(
         obj.flow,
@@ -741,7 +767,12 @@ def run(
     runtime.persist_constants()
     write_file(
         runner_attribute_file,
-        "%s:%s" % (get_metadata(), "/".join((obj.flow.name, runtime.run_id))),
+        "%s@%s:%s"
+        % (
+            obj.metadata.__class__.TYPE,
+            obj.metadata.__class__.INFO,
+            "/".join((obj.flow.name, runtime.run_id)),
+        ),
     )
     runtime.execute()
 
@@ -764,9 +795,20 @@ def before_run(obj, tags, decospecs):
     # A downside is that we need to have the following decorators handling
     # in two places in this module and make sure _init_step_decorators
     # doesn't get called twice.
-    if decospecs:
-        decorators._attach_decorators(obj.flow, decospecs)
+
+    # We want the order to be the following:
+    # - run level decospecs
+    # - top level decospecs
+    # - environment decospecs
+    all_decospecs = (
+        list(decospecs or [])
+        + obj.tl_decospecs
+        + list(obj.environment.decospecs() or [])
+    )
+    if all_decospecs:
+        decorators._attach_decorators(obj.flow, all_decospecs)
         obj.graph = FlowGraph(obj.flow.__class__)
+
     obj.check(obj.graph, obj.flow, obj.environment, pylint=obj.pylint)
     # obj.environment.init_environment(obj.logger)
 
@@ -837,6 +879,7 @@ def version(obj):
     multiple=True,
     help="Add a decorator to all steps. You can specify this option "
     "multiple times to attach multiple decorators in steps.",
+    callback=config_merge_cb,
 )
 @click.option(
     "--pylint/--no-pylint",
@@ -955,8 +998,11 @@ def start(
         deco_options,
     )
 
-    if decospecs:
-        decorators._attach_decorators(ctx.obj.flow, decospecs)
+    # In the case of run/resume, we will want to apply the TL decospecs
+    # *after* the run decospecs so that they don't take precedence. In other
+    # words, for the same decorator, we want `myflow.py run --with foo` to
+    # take precedence over any other `foo` decospec
+    ctx.obj.tl_decospecs = list(decospecs or [])
 
     # initialize current and parameter context for deploy-time parameters
     current._set_env(flow=ctx.obj.flow, is_running=False)
@@ -967,7 +1013,14 @@ def start(
     if ctx.invoked_subcommand not in ("run", "resume"):
         # run/resume are special cases because they can add more decorators with --with,
         # so they have to take care of themselves.
-        decorators._attach_decorators(ctx.obj.flow, ctx.obj.environment.decospecs())
+        all_decospecs = ctx.obj.tl_decospecs + list(
+            ctx.obj.environment.decospecs() or []
+        )
+        if all_decospecs:
+            decorators._attach_decorators(ctx.obj.flow, all_decospecs)
+            # Regenerate graph if we attached more decorators
+            ctx.obj.graph = FlowGraph(ctx.obj.flow.__class__)
+
         decorators._init_step_decorators(
             ctx.obj.flow,
             ctx.obj.graph,
@@ -975,6 +1028,7 @@ def start(
             ctx.obj.flow_datastore,
             ctx.obj.logger,
         )
+
         # TODO (savin): Enable lazy instantiation of package
         ctx.obj.package = None
     if ctx.invoked_subcommand is None:

metaflow/decorators.py

@@ -158,13 +158,14 @@ class Decorator(object):
                     attr_list.append("%s=%s" % (k, str(v)))
                 else:
                     attr_list.append("%s=%s" % (k, json.dumps(v).replace('"', '\\"')))
+
             attrstr = ",".join(attr_list)
             return "%s:%s" % (self.name, attrstr)
         else:
             return self.name
 
     def __str__(self):
-        mode = "decorated" if self.statically_defined else "cli"
+        mode = "static" if self.statically_defined else "dynamic"
         attrs = " ".join("%s=%s" % x for x in self.attributes.items())
         if attrs:
             attrs = " " + attrs
@@ -450,6 +451,18 @@ def _base_step_decorator(decotype, *args, **kwargs):
         return wrap
 
 
+_all_step_decos = None
+
+
+def _get_all_step_decos():
+    global _all_step_decos
+    if _all_step_decos is None:
+        from .plugins import STEP_DECORATORS
+
+        _all_step_decos = {decotype.name: decotype for decotype in STEP_DECORATORS}
+    return _all_step_decos
+
+
 def _attach_decorators(flow, decospecs):
     """
     Attach decorators to all steps during runtime. This has the same
@@ -462,6 +475,7 @@ def _attach_decorators(flow, decospecs):
     #
     # Note that each step gets its own instance of the decorator class,
     # so decorator can maintain step-specific state.
+
     for step in flow:
         _attach_decorators_to_step(step, decospecs)
 
@@ -472,9 +486,8 @@ def _attach_decorators_to_step(step, decospecs):
     effect as if you defined the decorators statically in the source for
     the step.
     """
-    from .plugins import STEP_DECORATORS
 
-    decos = {decotype.name: decotype for decotype in STEP_DECORATORS}
+    decos = _get_all_step_decos()
 
     for decospec in decospecs:
         splits = decospec.split(":", 1)

metaflow/metaflow_config.py

@@ -249,6 +249,14 @@ CONTACT_INFO = from_conf(
     },
 )
 
+
+###
+# Decorators
+###
+# Format is a space separated string of decospecs (what is passed
+# using --with)
+DECOSPECS = from_conf("DECOSPECS", "")
+
 ###
 # AWS Batch configuration
 ###
@@ -496,6 +504,8 @@ def get_pinned_conda_libs(python_version, datastore_type):
 try:
     from metaflow.extension_support import get_modules
 
+    _TOGGLE_DECOSPECS = []
+
     ext_modules = get_modules("config")
     for m in ext_modules:
         # We load into globals whatever we have in extension_module
@@ -519,8 +529,18 @@ try:
                     return d1
 
                 globals()[n] = _new_get_pinned_conda_libs
+            elif n == "TOGGLE_DECOSPECS":
+                if any([x.startswith("-") for x in o]):
+                    raise ValueError("Removing decospecs is not currently supported")
+                if any(" " in x for x in o):
+                    raise ValueError("Decospecs cannot contain spaces")
+                _TOGGLE_DECOSPECS.extend(o)
             elif not n.startswith("__") and not isinstance(o, types.ModuleType):
                 globals()[n] = o
+    # If DECOSPECS is set, use that, else extrapolate from extensions
+    if not DECOSPECS:
+        DECOSPECS = " ".join(_TOGGLE_DECOSPECS)
+
 finally:
     # Erase all temporary names to avoid leaking things
     for _n in [
@@ -537,6 +557,7 @@ finally:
         "v",
         "f1",
         "f2",
+        "_TOGGLE_DECOSPECS",
     ]:
         try:
             del globals()[_n]

metaflow/plugins/argo/argo_workflows.py

@@ -184,6 +184,12 @@ class ArgoWorkflows(object):
         # allowed by Metaflow - guaranteeing uniqueness.
         return name.replace("_", "-")
 
+    @staticmethod
+    def _sensor_name(name):
+        # Unfortunately, Argo Events Sensor names don't allow for
+        # dots (sensors run into an error) which rules out self.name :(
+        return name.replace(".", "-")
+
     @staticmethod
     def list_templates(flow_name, all=False):
         client = ArgoClient(namespace=KUBERNETES_NAMESPACE)
@@ -216,7 +222,7 @@ class ArgoWorkflows(object):
 
         # The workflow might have sensors attached to it, which consume actual resources.
         # Try to delete these as well.
-        sensor_deleted = client.delete_sensor(name)
+        sensor_deleted = client.delete_sensor(ArgoWorkflows._sensor_name(name))
 
         # After cleaning up related resources, delete the workflow in question.
         # Failure in deleting is treated as critical and will be made visible to the user
@@ -333,10 +339,9 @@ class ArgoWorkflows(object):
             argo_client.schedule_workflow_template(
                 self.name, self._schedule, self._timezone
             )
-            # Register sensor. Unfortunately, Argo Events Sensor names don't allow for
-            # dots (sensors run into an error) which rules out self.name :(
+            # Register sensor.
             # Metaflow will overwrite any existing sensor.
-            sensor_name = self.name.replace(".", "-")
+            sensor_name = ArgoWorkflows._sensor_name(self.name)
             if self._sensor:
                 argo_client.register_sensor(sensor_name, self._sensor.to_json())
             else:
@@ -2039,7 +2044,7 @@ class ArgoWorkflows(object):
             .metadata(
                 # Sensor metadata.
                 ObjectMeta()
-                .name(self.name.replace(".", "-"))
+                .name(ArgoWorkflows._sensor_name(self.name))
                 .namespace(KUBERNETES_NAMESPACE)
                 .label("app.kubernetes.io/name", "metaflow-sensor")
                 .label("app.kubernetes.io/part-of", "metaflow")

metaflow/version.py

@@ -1 +1 @@
-metaflow_version = "2.12.0"
+metaflow_version = "2.12.2"

{metaflow-2.12.0.dist-info → metaflow-2.12.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: metaflow
-Version: 2.12.0
+Version: 2.12.2
 Summary: Metaflow: More Data Science, Less Engineering
 Author: Metaflow Developers
 Author-email: help@metaflow.org
@@ -26,7 +26,7 @@ License-File: LICENSE
 Requires-Dist: requests
 Requires-Dist: boto3
 Provides-Extra: stubs
-Requires-Dist: metaflow-stubs ==2.12.0 ; extra == 'stubs'
+Requires-Dist: metaflow-stubs ==2.12.2 ; extra == 'stubs'
 
 ![Metaflow_Logo_Horizontal_FullColor_Ribbon_Dark_RGB](https://user-images.githubusercontent.com/763451/89453116-96a57e00-d713-11ea-9fa6-82b29d4d6eff.png)
 

{metaflow-2.12.0.dist-info → metaflow-2.12.2.dist-info}/RECORD

@@ -1,12 +1,12 @@
 metaflow/R.py,sha256=bNcXXpGOe5wquzTRGyU0KS9gJMz7HceKjXxammYPUE0,3841
 metaflow/__init__.py,sha256=3GEqivYycw6mvjn-ndEFGuCdYnGztciQgEWX87vjf6M,5885
 metaflow/cards.py,sha256=tP1_RrtmqdFh741pqE4t98S7SA0MtGRlGvRICRZF1Mg,426
-metaflow/cli.py,sha256=3OhQDuXbgJjg-KrsAcXCObWOcXpd9Qedbv_RDLO682g,31935
+metaflow/cli.py,sha256=4NTGG4_UCd53HhscDVMQGl4VcV8O6C33iFKfTc-n2tg,33736
 metaflow/cli_args.py,sha256=lcgBGNTvfaiPxiUnejAe60Upt9swG6lRy1_3OqbU6MY,2616
 metaflow/clone_util.py,sha256=XfUX0vssu_hPlyZfhFl1AOnKkLqvt33Qp8xNrmdocGg,2057
 metaflow/cmd_with_io.py,sha256=kl53HkAIyv0ecpItv08wZYczv7u3msD1VCcciqigqf0,588
 metaflow/debug.py,sha256=HEmt_16tJtqHXQXsqD9pqOFe3CWR5GZ7VwpaYQgnRdU,1466
-metaflow/decorators.py,sha256=n91bvWA4JJWHwZnI02-rFGBZsWWMtaABYlWYcOvHuRw,21391
+metaflow/decorators.py,sha256=vmM1uavxAaLhS8fC54h2y4UL_NJr2jQ5pHxaxJLCWuc,21587
 metaflow/event_logger.py,sha256=joTVRqZPL87nvah4ZOwtqWX8NeraM_CXKXXGVpKGD8o,780
 metaflow/events.py,sha256=ahjzkSbSnRCK9RZ-9vTfUviz_6gMvSO9DGkJ86X80-k,5300
 metaflow/exception.py,sha256=KC1LHJQzzYkWib0DeQ4l_A2r8VaudywsSqIQuq1RDZU,4954
@@ -15,7 +15,7 @@ metaflow/graph.py,sha256=ZPxyG8uwVMk5YYgX4pQEQaPZtZM5Wy-G4NtJK73IEuA,11818
 metaflow/includefile.py,sha256=yHczcZ_U0SrasxSNhZb3DIBzx8UZnrJCl3FzvpEQLOA,19753
 metaflow/integrations.py,sha256=LlsaoePRg03DjENnmLxZDYto3NwWc9z_PtU6nJxLldg,1480
 metaflow/lint.py,sha256=_kYAbAtsP7IG1Rd0FqNbo8I8Zs66_0WXbaZJFARO3dE,10394
-metaflow/metaflow_config.py,sha256=WdLyxSwQy1XZUoJWrCMujz6OuzRqFSZZ31OP9b9mihc,21618
+metaflow/metaflow_config.py,sha256=hso-EOFxKJxGUiotTdG2logrZHPpKDaY7hm7p4q8hJc,22305
 metaflow/metaflow_config_funcs.py,sha256=pCaiQ2ez9wXixJI3ehmf3QiW9lUqFrZnBZx1my_0wIg,4874
 metaflow/metaflow_current.py,sha256=sCENPBiji3LcPbwgOG0ukGd_yEc5tST8EowES8DzRtA,7430
 metaflow/metaflow_environment.py,sha256=HJfhI3GrU-YbY7Etu9M-1q7EbwtEGFzCBhrUs45OLXY,7403
@@ -35,7 +35,7 @@ metaflow/tuple_util.py,sha256=_G5YIEhuugwJ_f6rrZoelMFak3DqAR2tt_5CapS1XTY,830
 metaflow/unbounded_foreach.py,sha256=p184WMbrMJ3xKYHwewj27ZhRUsSj_kw1jlye5gA9xJk,387
 metaflow/util.py,sha256=m5womQ7y-jXehuMyHPfByDbZ4HwTJxzs869cPOlMR8s,13057
 metaflow/vendor.py,sha256=FchtA9tH22JM-eEtJ2c9FpUdMn8sSb1VHuQS56EcdZk,5139
-metaflow/version.py,sha256=pqIxgkkbL8fwxLZUUfdCZLx-eMGZTjLRM1r2oZdtsRY,28
+metaflow/version.py,sha256=sdavZlXn6yAn7ZbaZSr5MI3visWVVwTt1jCnVgTOkcM,28
 metaflow/_vendor/__init__.py,sha256=y_CiwUD3l4eAKvTVDZeqgVujMy31cAM1qjAB-HfI-9s,353
 metaflow/_vendor/typing_extensions.py,sha256=0nUs5p1A_UrZigrAVBoOEM6TxU37zzPDUtiij1ZwpNc,110417
 metaflow/_vendor/zipp.py,sha256=ajztOH-9I7KA_4wqDYygtHa6xUBVZgFpmZ8FE74HHHI,8425
@@ -174,7 +174,7 @@ metaflow/plugins/airflow/sensors/s3_sensor.py,sha256=JUKoGNoTCtrO9MNEneEC7ldRNwg
 metaflow/plugins/argo/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 metaflow/plugins/argo/argo_client.py,sha256=MKKhMCbWOPzf6z5zQQiyDRHHkAXcO7ipboDZDqAAvOk,15849
 metaflow/plugins/argo/argo_events.py,sha256=_C1KWztVqgi3zuH57pInaE9OzABc2NnncC-zdwOMZ-w,5909
-metaflow/plugins/argo/argo_workflows.py,sha256=6px2phfm19G9pz4zcaC4xYsdoxNC8SxdzZr1uyoMaV4,130187
+metaflow/plugins/argo/argo_workflows.py,sha256=cyoWiEMgV2jZpE2cvMDJPOqEfRuhYoG4m1rqgqm0Gzc,130326
 metaflow/plugins/argo/argo_workflows_cli.py,sha256=sZTpgfmc50eT3e0qIxpVqUgWhTcYlO1HM4gU6Oaya8g,33259
 metaflow/plugins/argo/argo_workflows_decorator.py,sha256=K5t4uIk2IXPdK7v7DEjj3buSB8ikLjLycKjbZUYeiaw,6781
 metaflow/plugins/argo/generate_input_paths.py,sha256=loYsI6RFX9LlFsHb7Fe-mzlTTtRdySoOu7sYDy-uXK0,881
@@ -332,9 +332,9 @@ metaflow/tutorials/07-worldview/README.md,sha256=5vQTrFqulJ7rWN6r20dhot9lI2sVj9W
 metaflow/tutorials/07-worldview/worldview.ipynb,sha256=ztPZPI9BXxvW1QdS2Tfe7LBuVzvFvv0AToDnsDJhLdE,2237
 metaflow/tutorials/08-autopilot/README.md,sha256=GnePFp_q76jPs991lMUqfIIh5zSorIeWznyiUxzeUVE,1039
 metaflow/tutorials/08-autopilot/autopilot.ipynb,sha256=DQoJlILV7Mq9vfPBGW-QV_kNhWPjS5n6SJLqePjFYLY,3191
-metaflow-2.12.0.dist-info/LICENSE,sha256=nl_Lt5v9VvJ-5lWJDT4ddKAG-VZ-2IaLmbzpgYDz2hU,11343
-metaflow-2.12.0.dist-info/METADATA,sha256=5c5f8MYqP0w7J8tjxmXywb8k_NRusFNfCCdPRVp3yxw,5906
-metaflow-2.12.0.dist-info/WHEEL,sha256=DZajD4pwLWue70CAfc7YaxT1wLUciNBvN_TTcvXpltE,110
-metaflow-2.12.0.dist-info/entry_points.txt,sha256=IKwTN1T3I5eJL3uo_vnkyxVffcgnRdFbKwlghZfn27k,57
-metaflow-2.12.0.dist-info/top_level.txt,sha256=v1pDHoWaSaKeuc5fKTRSfsXCKSdW1zvNVmvA-i0if3o,9
-metaflow-2.12.0.dist-info/RECORD,,
+metaflow-2.12.2.dist-info/LICENSE,sha256=nl_Lt5v9VvJ-5lWJDT4ddKAG-VZ-2IaLmbzpgYDz2hU,11343
+metaflow-2.12.2.dist-info/METADATA,sha256=uPb9tJHUxC2bXau5g1PPXM92VbR1OwRuiMAW68JEsX8,5906
+metaflow-2.12.2.dist-info/WHEEL,sha256=DZajD4pwLWue70CAfc7YaxT1wLUciNBvN_TTcvXpltE,110
+metaflow-2.12.2.dist-info/entry_points.txt,sha256=IKwTN1T3I5eJL3uo_vnkyxVffcgnRdFbKwlghZfn27k,57
+metaflow-2.12.2.dist-info/top_level.txt,sha256=v1pDHoWaSaKeuc5fKTRSfsXCKSdW1zvNVmvA-i0if3o,9
+metaflow-2.12.2.dist-info/RECORD,,