meta-edc 1.1.13__py3-none-any.whl → 1.1.15__py3-none-any.whl

meta_reports/models/dbviews/imp_substitutions/unmanaged_model.py

@@ -8,7 +8,6 @@ from .view_definition import get_view_definition
 
 
 class ImpSubstitutions(QaReportModelMixin, DBView):
-
     original_id = models.UUIDField(null=True)
 
     sid = models.IntegerField(verbose_name="Original SID", null=True)

meta_reports/models/dbviews/on_study_missing_lab_values/unmanged_model.py

@@ -9,7 +9,6 @@ from .view_definition import get_view_definition
 
 
 class OnStudyMissingLabValues(OnStudyMissingValuesModelMixin, QaReportModelMixin, DBView):
-
     view_definition = get_view_definition()
 
     class Meta:

meta_reports/models/dbviews/on_study_missing_values/unmanged_model.py

@@ -9,7 +9,6 @@ from .view_definition import get_view_definition
 
 
 class OnStudyMissingValues(OnStudyMissingValuesModelMixin, QaReportModelMixin, DBView):
-
     view_definition = get_view_definition()
 
     class Meta:

meta_reports/models/dbviews/patient_history_missing_baseline_cd4/unmanaged_model.py

@@ -6,7 +6,6 @@ from .view_definition import get_view_definition
 
 
 class PatientHistoryMissingBaselineCd4(QaReportModelMixin, DBView):
-
     visit_code = models.CharField(max_length=25)
 
     visit_code_sequence = models.IntegerField()

meta_reports/models/dbviews/unattended_three_in_row/unmanaged_model.py

@@ -6,7 +6,6 @@ from .view_definition import get_view_definition
 
 
 class UnattendedThreeInRow(QaReportModelMixin, DBView):
-
     appt_datetime = models.DateTimeField()
 
     first_value = models.CharField(verbose_name="First", max_length=25)

meta_reports/models/dbviews/unattended_three_in_row2/unmanaged_model.py

@@ -6,7 +6,6 @@ from .view_definition import get_view_definition
 
 
 class UnattendedThreeInRow2(QaReportModelMixin, DBView):
-
     first_value = models.CharField(verbose_name="First", max_length=25)
 
     second_value = models.CharField(verbose_name="Second", max_length=25)

meta_reports/models/dbviews/unattended_two_in_row/unmanaged_model.py

@@ -6,7 +6,6 @@ from .view_definition import get_view_definition
 
 
 class UnattendedTwoInRow(QaReportModelMixin, DBView):
-
     appt_datetime = models.DateTimeField()
 
     first_value = models.CharField(verbose_name="First", max_length=25)

meta_screening/admin/fieldsets.py

@@ -1,4 +1,3 @@
-
 from django.utils.safestring import mark_safe
 
 from ..forms import (

meta_screening/admin/screening_part_one_admin.py

@@ -1,4 +1,3 @@
-
 from django.contrib import admin
 from django_audit_fields.admin import audit_fieldset_tuple
 from edc_sites.admin import SiteModelAdminMixin

meta_screening/forms/field_lists.py

@@ -1,4 +1,3 @@
-
 part_one_fields: tuple[str, ...] = (
     "report_datetime",
     "screening_consent",

meta_subject/admin/birth_outcome_admin.py

@@ -66,7 +66,7 @@ class BirthOutcomesAdmin(
         return tuple(set(fields + custom_fields))
 
     @admin.display
-    def delivery_report(self, obj=None, label=None):
+    def delivery_report(self, obj=None, label=None):  # noqa: ARG002
         url = reverse("meta_subject_admin:meta_subject_delivery_changelist")
         url = f"{url}?q={obj.subject_identifier}"
         context = dict(title="Delivery", url=url, label="Delivery")
@@ -90,5 +90,7 @@ class BirthOutcomesAdmin(
                 if callable(super().view_on_site):
                     url = super().view_on_site(obj)
                 else:
-                    raise NoReverseMatch(f"{e}. See subject_dashboard_url_name for {self!r}.")
+                    raise NoReverseMatch(
+                        f"{e}. See subject_dashboard_url_name for {self!r}."
+                    ) from e
         return url

meta_subject/admin/fields.py

@@ -1,12 +1,12 @@
-def get_blood_pressure_fields():
-    return [
+def get_blood_pressure_fields() -> tuple[str, ...]:
+    return (
         "sys_blood_pressure_one",
         "dia_blood_pressure_one",
         "sys_blood_pressure_two",
         "dia_blood_pressure_two",
         "severe_htn",
-    ]
+    )
 
 
-def get_respiratory_o2_fields():
-    return ["respiratory_rate"]
+def get_respiratory_o2_fields() -> tuple[str, ...]:
+    return ("respiratory_rate",)

meta_subject/admin/fieldsets.py

@@ -1,5 +1,5 @@
 def get_htn_fieldset(part=None):
-    fields = [
+    fields = (
         "htn_diagnosis",
         "on_htn_treatment",
         "htn_treatment",
@@ -9,11 +9,11 @@ def get_htn_fieldset(part=None):
         "dyslipidaemia_rx",
         "concomitant_conditions",
         "concomitant_medications",
-    ]
+    )
 
     return (
         f"Part {part}: Hypertension",
-        {"fields": tuple(fields)},
+        {"fields": fields},
     )
 
 
@@ -22,7 +22,7 @@ def get_hiv_fieldset(part=None):
     if part:
         title = f"Part {part}: {title}"
     # TODO: previous_arv_regimen_start_date is PHASE 3 only
-    fields = [
+    fields = (
         "hiv_diagnosis_date",
         "arv_initiation_date",
         "viral_load",
@@ -39,7 +39,7 @@ def get_hiv_fieldset(part=None):
         "on_oi_prophylaxis",
         "oi_prophylaxis",
         "other_oi_prophylaxis",
-    ]
+    )
     return (
         title,
         {"fields": fields},

meta_subject/admin/glucose_admin.py

@@ -84,13 +84,11 @@ class GlucoseAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
         list_display = list(list_display)
         list_display.insert(3, "ogtt_value")
         list_display.insert(3, "fbg_value")
-        list_display = tuple(list_display)
-        return list_display
+        return tuple(list_display)
 
     def get_list_filter(self, request) -> tuple[str | type[SimpleListFilter], ...]:
         list_filter = super().get_list_filter(request)
         list_filter = list(list_filter)
         list_filter.insert(2, OgttListFilter)
         list_filter.insert(2, FbgListFilter)
-        list_filter = tuple(list_filter)
-        return list_filter
+        return tuple(list_filter)

meta_subject/admin/glucose_fbg_admin.py

@@ -17,7 +17,7 @@ from .modeladmin import CrfModelAdminMixin
 class GlucoseFbgAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
     form = GlucoseFbgForm
 
-    fieldsets = [
+    fieldsets = (
         (None, {"fields": ("subject_visit", "report_datetime")}),
         (
             "Fasting",
@@ -52,9 +52,9 @@ class GlucoseFbgAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
         ),
         crf_status_fieldset,
         audit_fieldset_tuple,
-    ]
+    )
 
-    radio_fields = {
+    radio_fields = {  # noqa: RUF012
         "fasting": admin.VERTICAL,
         "fbg_units": admin.VERTICAL,
         "fbg_performed": admin.VERTICAL,
@@ -69,12 +69,10 @@ class GlucoseFbgAdmin(CrfModelAdminMixin, SimpleHistoryAdmin):
         list_display = list(list_display)
         # list_display.insert(3, "ogtt")
         list_display.insert(3, "fbg")
-        list_display = tuple(list_display)
-        return list_display
+        return tuple(list_display)
 
     def get_list_filter(self, request) -> tuple[str | type[SimpleListFilter], ...]:
         list_filter = super().get_list_filter(request)
         list_filter = list(list_filter)
         list_filter.insert(2, GlucoseListFilter)
-        list_filter = tuple(list_filter)
-        return list_filter
+        return tuple(list_filter)

meta_subject/admin/list_filters.py

@@ -13,14 +13,14 @@ class GlucoseListFilter(SimpleListFilter):
     parameter_name = "glucose_value"
     model_cls = GlucoseFbg
 
-    def lookups(self, request, model_admin):
+    def lookups(self, request, model_admin):  # noqa: ARG002
         return (
             (NORMAL, "Normal"),
             (HIGH, "High"),
             (VERY_HIGH, "Very high"),
         )
 
-    def queryset(self, request, queryset):
+    def queryset(self, request, queryset):  # noqa: ARG002
         qs = None
         if self.value():
             if self.value() == NORMAL:
@@ -52,7 +52,7 @@ class OgttListFilter(SimpleListFilter):
             (HIGH, "High"),
         )
 
-    def queryset(self, request, queryset):
+    def queryset(self, request, queryset):  # noqa: ARG002
         qs = None
         if self.value():
             if self.value() == NORMAL:

meta_subject/admin/next_appointment_admin.py

@@ -16,5 +16,4 @@ __all__ = ["NextAppointmentAdmin"]
 class NextAppointmentAdmin(
     CrfModelAdminMixin, NextAppointmentCrfModelAdminMixin, SimpleHistoryAdmin
 ):
-
     form = NextAppointmentForm

meta_subject/form_validators/glucose_form_validator.py

@@ -70,11 +70,13 @@ class GlucoseFormValidator(FbgOgttFormValidatorMixin, CrfFormValidator):
 
     def is_endpoint(self):
         value = NO
-        if (self.cleaned_data.get("fbg_value") >= Decimal("7.0") and self.cleaned_data.get(
-            "ogtt_value"
-        ) >= Decimal("11.1")) or (self.cleaned_data.get("fbg_value") < Decimal("7.0") and self.cleaned_data.get(
-            "ogtt_value"
-        ) >= Decimal("11.1")):
+        if (
+            self.cleaned_data.get("fbg_value") >= Decimal("7.0")
+            and self.cleaned_data.get("ogtt_value") >= Decimal("11.1")
+        ) or (
+            self.cleaned_data.get("fbg_value") < Decimal("7.0")
+            and self.cleaned_data.get("ogtt_value") >= Decimal("11.1")
+        ):
             value = YES
         elif self.cleaned_data.get("fbg_value") >= Decimal("7.0") and self.cleaned_data.get(
             "ogtt_value"

meta_subject/forms/blood_results/blood_results_hba1c_form.py

@@ -9,7 +9,7 @@ from ...models import BloodResultsHba1c
 
 
 class BloodResultsHba1cFormValidator(BloodResultsFormValidatorMixin, CrfFormValidator):
-    panels = [hba1c_poc_panel, hba1c_panel]
+    panels = (hba1c_poc_panel, hba1c_panel)
 
 
 class BloodResultsHba1cForm(ActionItemCrfFormMixin, CrfModelFormMixin, forms.ModelForm):

meta_subject/forms/subject_requisition_form.py

@@ -20,7 +20,7 @@ class SubjectRequisitionForm(RequisitionModelFormMixin, forms.ModelForm):
         cleaned_data = super().clean()
         if cleaned_data.get("reason_not_drawn") == NOT_REQUIRED:
             raise forms.ValidationError(
-                {"reason_not_drawn": "Invalid choice. Not expected " "for this panel"}
+                {"reason_not_drawn": "Invalid choice. Not expected for this panel"}
             )
         return cleaned_data
 

meta_subject/models/blood_results/__init__.py

@@ -15,4 +15,3 @@ __all__ = [
     "BloodResultsLipids",
     "BloodResultsRft",
 ]
-

meta_subject/models/next_appointment.py

@@ -9,7 +9,6 @@ __all__ = ["NextAppointment"]
 
 
 class NextAppointment(NextAppointmentCrfModelMixin, CrfModelMixin, BaseUuidModel):
-
     class Meta(CrfModelMixin.Meta, BaseUuidModel.Meta):
         verbose_name = "Next Appointment"
         verbose_name_plural = "Next Appointments"