meta-edc 1.1.13__py3-none-any.whl → 1.1.15__py3-none-any.whl

meta_prn/models/end_of_study.py

@@ -6,6 +6,7 @@ from edc_constants.constants import (
     DELIVERY,
     DIABETES,
     NOT_APPLICABLE,
+    NULL_STRING,
     OTHER,
     PREGNANCY,
     TOXICITY,
@@ -73,7 +74,7 @@ class EndOfStudy(ActionModelMixin, SiteModelMixin, OffstudyModelMixin, BaseUuidM
         verbose_name="If OTHER, please specify",
         max_length=500,
         blank=True,
-        null=True,
+        default=NULL_STRING,
     )
 
     # TODO: 6m off drug and duration ?? See SOP
@@ -118,8 +119,7 @@ class EndOfStudy(ActionModelMixin, SiteModelMixin, OffstudyModelMixin, BaseUuidM
 
     clinical_withdrawal_reason = models.CharField(
         verbose_name=(
-            "If the patient was withdrawn on CLINICAL grounds, "
-            "please specify PRIMARY reason"
+            "If the patient was withdrawn on CLINICAL grounds, please specify PRIMARY reason"
         ),
         max_length=25,
         choices=CLINICAL_WITHDRAWAL_REASONS,
@@ -130,14 +130,14 @@ class EndOfStudy(ActionModelMixin, SiteModelMixin, OffstudyModelMixin, BaseUuidM
         verbose_name="If withdrawn for 'other' condition, please explain",
         max_length=500,
         blank=True,
-        null=True,
+        default=NULL_STRING,
     )
 
     clinical_withdrawal_investigator_decision = models.TextField(
         verbose_name="If withdrawl was an 'investigator decision', please explain ...",
         max_length=500,
         blank=True,
-        null=True,
+        default=NULL_STRING,
     )
 
     toxicity_withdrawal_reason = models.CharField(
@@ -151,7 +151,7 @@ class EndOfStudy(ActionModelMixin, SiteModelMixin, OffstudyModelMixin, BaseUuidM
         verbose_name="If 'other toxicity', please specify ...",
         max_length=500,
         blank=True,
-        null=True,
+        default=NULL_STRING,
     )
 
     transfer_date = models.DateField(
@@ -173,7 +173,7 @@ class EndOfStudy(ActionModelMixin, SiteModelMixin, OffstudyModelMixin, BaseUuidM
         verbose_name="Please provide further details if possible",
         max_length=500,
         blank=True,
-        null=True,
+        default=NULL_STRING,
     )
 
     class Meta(OffstudyModelMixin.Meta):

meta_prn/models/loss_to_followup.py

@@ -1,7 +1,7 @@
 from django.db import models
 from edc_action_item.models.action_model_mixin import ActionModelMixin
 from edc_constants.choices import YES_NO
-from edc_constants.constants import OTHER
+from edc_constants.constants import NULL_STRING, OTHER
 from edc_identifier.model_mixins import UniqueSubjectIdentifierFieldMixin
 from edc_ltfu.constants import LTFU_ACTION
 from edc_model.models import BaseUuidModel, OtherCharField
@@ -48,7 +48,7 @@ class LossToFollowup(
 
     home_visit_detail = models.TextField(
         verbose_name="If YES, provide any further details of the home visit",
-        null=True,
+        default=NULL_STRING,
         blank=False,
     )
 
@@ -64,13 +64,13 @@ class LossToFollowup(
         verbose_name=(
             "Please give details of the circumstances that have led to this decision."
         ),
-        null=True,
+        default=NULL_STRING,
         blank=False,
     )
 
     class Meta(BaseUuidModel.Meta):
         verbose_name = "Loss to Follow Up"
         verbose_name_plural = "Loss to Follow Up"
-        indexes = [
-            models.Index(fields=["subject_identifier", "action_identifier", "site", "id"])
-        ]
+        indexes = (
+            models.Index(fields=("subject_identifier", "action_identifier", "site", "id")),
+        )

meta_prn/models/off_study_medication.py

@@ -1,5 +1,6 @@
 from django.db import models
 from edc_action_item.models import ActionModelMixin
+from edc_constants.constants import NULL_STRING
 from edc_identifier.model_mixins import UniqueSubjectIdentifierFieldMixin
 from edc_model.models import BaseUuidModel
 from edc_pharmacy.models import Medication
@@ -46,13 +47,13 @@ class OffStudyMedication(
 
     reason_other = models.TextField(
         verbose_name="If other, please specify ...",
-        null=True,
+        default=NULL_STRING,
         blank=True,
     )
 
     comment = models.TextField(
         verbose_name="Any additional comments",
-        null=True,
+        default=NULL_STRING,
         blank=True,
     )
 

meta_prn/models/pregnancy_notification.py

@@ -1,7 +1,7 @@
 from django.db import models
 from edc_action_item.models import ActionModelMixin
 from edc_constants.choices import YES_NO, YES_NO_UNSURE
-from edc_constants.constants import YES
+from edc_constants.constants import NULL_STRING, YES
 from edc_identifier.model_mixins import NonUniqueSubjectIdentifierFieldMixin
 from edc_model.models import BaseUuidModel
 from edc_sites.model_mixins import SiteModelMixin
@@ -44,7 +44,7 @@ class PregnancyNotification(
 
     unconfirmed_details = models.TextField(
         verbose_name="If no, please provide details",
-        null=True,
+        default=NULL_STRING,
         blank=True,
     )
 
@@ -97,4 +97,4 @@ class PregnancyNotification(
     class Meta(BaseUuidModel.Meta):
         verbose_name = "Pregnancy Notification"
         verbose_name_plural = "Pregnancy Notifications"
-        unique_together = ["subject_identifier", "edd"]
+        unique_together = ("subject_identifier", "edd")

meta_prn/models/protocol_incident.py

@@ -1,5 +1,6 @@
 from django.db import models
 from edc_action_item.models import ActionItem, ActionModelMixin
+from edc_constants.constants import NULL_STRING
 from edc_identifier.model_mixins import NonUniqueSubjectIdentifierFieldMixin
 from edc_model.models import BaseUuidModel
 from edc_protocol_incident.constants import PROTOCOL_INCIDENT_ACTION
@@ -26,7 +27,9 @@ class ProtocolIncident(
         related_name="meta_prn_action_item",
     )
 
-    action_required_old = models.CharField(max_length=45, choices=ACTION_REQUIRED, null=True)
+    action_required_old = models.CharField(
+        max_length=45, choices=ACTION_REQUIRED, default=NULL_STRING
+    )
 
     def natural_key(self):
         return (self.action_identifier,)

meta_prn/models/signals.py

@@ -24,7 +24,7 @@ from .pregnancy_notification import PregnancyNotification
     sender=PregnancyNotification,
     dispatch_uid="update_schedule_on_pregnancy_notification_post_save",
 )
-def update_schedule_on_pregnancy_notification_post_save(sender, instance, raw, **kwargs):
+def update_schedule_on_pregnancy_notification_post_save(sender, instance, raw, **kwargs):  # noqa: ARG001
     if not raw:
         try:
             OffSchedule.objects.get(subject_identifier=instance.subject_identifier)
@@ -58,18 +58,20 @@ def update_schedule_on_pregnancy_notification_post_save(sender, instance, raw, *
     dispatch_uid="update_urine_pregnancy_on_pregnancy_notification_on_post_save",
 )
 def update_urine_pregnancy_on_pregnancy_notification_on_post_save(
-    sender, instance, raw, **kwargs
+    sender,  # noqa: ARG001
+    instance,
+    raw,
+    **kwargs,  # noqa: ARG001
 ):
-    if not raw:
-        if instance.bhcg_confirmed == YES:
-            UrinePregnancy.objects.filter(
-                subject_visit__subject_identifier=instance.subject_identifier,
-                notified=False,
-                assay_date__lte=instance.report_datetime.date(),
-            ).update(
-                notified_datetime=instance.report_datetime,
-                notified=True,
-            )
+    if not raw and instance.bhcg_confirmed == YES:
+        UrinePregnancy.objects.filter(
+            subject_visit__subject_identifier=instance.subject_identifier,
+            notified=False,
+            assay_date__lte=instance.report_datetime.date(),
+        ).update(
+            notified_datetime=instance.report_datetime,
+            notified=True,
+        )
 
 
 @receiver(
@@ -78,7 +80,7 @@ def update_urine_pregnancy_on_pregnancy_notification_on_post_save(
     sender=DmReferral,
     dispatch_uid="update_schedule_on_dm_referral_post_save",
 )
-def update_schedule_on_dm_referral_post_save(sender, instance, raw, **kwargs):
+def update_schedule_on_dm_referral_post_save(sender, instance, raw, **kwargs):  # noqa: ARG001
     if not raw:
         try:
             OffScheduleDmReferral.objects.get(subject_identifier=instance.subject_identifier)

meta_prn/models/subject_transfer.py

@@ -8,7 +8,6 @@ class SubjectTransfer(
     SubjectTransferModelMixin,
     BaseUuidModel,
 ):
-
     transfer_reason = models.ManyToManyField(
         f"{settings.LIST_MODEL_APP_LABEL}.transferreasons",
         verbose_name="Reason for transfer",

meta_rando/randomizers.py

@@ -30,7 +30,7 @@ class RandomizerPhaseThree(Randomizer):
     model = "meta_rando.randomizationlist"
     filename = "randomization_list_phase_three.csv"
     importer_cls = RandomizationListImporterPhaseThree
-    extra_csv_fieldnames = ["gender"]
+    extra_csv_fieldnames = ("gender",)
 
     def __init__(self, gender=None, **kwargs):
         self.gender = gender

meta_reports/admin/dbviews/imp_substitutions_admin.py

@@ -49,7 +49,7 @@ class ImpSubstitutionsAdmin(
         "allocated_datetime",
     )
 
-    search_fields = ["subject_identifier", "sid", "dispensed_sid"]
+    search_fields = ("subject_identifier", "sid", "dispensed_sid")
 
     def dashboard(self, obj=None, label=None) -> str:
         kwargs = self.get_subject_dashboard_url_kwargs(obj)

meta_reports/admin/dbviews/on_study_missing_values_admin/unmanaged_model_admin.py

@@ -7,7 +7,6 @@ from ....models import OnStudyMissingValues
 
 @admin.register(OnStudyMissingValues, site=meta_reports_admin)
 class OnStudyMissingValuesAdmin(OnStudyMissingValuesModelAdminMixin, admin.ModelAdmin):
-
     include_note_column: bool = True
     project_reports_admin: str = "meta_reports_admin"
     project_subject_admin: str = "meta_subject_admin"

meta_reports/admin/endpoints_all_admin.py

@@ -8,6 +8,5 @@ from .modeladmin_mixins import EndpointsModelAdminMixin
 
 @admin.register(EndpointsProxy, site=meta_reports_admin)
 class EndpointsAllAdmin(EndpointsModelAdminMixin, admin.ModelAdmin):
-
     def rendered_change_list_note(self):
         return render_to_string("meta_reports/endpoints_all_change_list_note.html")

meta_reports/admin/modeladmin_mixins.py

@@ -14,7 +14,7 @@ from edc_visit_schedule.admin import ScheduleStatusListFilter
 from ..tasks import update_endpoints_table
 
 
-def update_endpoints_table_action(modeladmin, request, queryset):
+def update_endpoints_table_action(modeladmin, request, queryset):  # noqa: ARG001
     subject_identifiers = []
     if queryset.count() != modeladmin.model.objects.count():
         subject_identifiers = [o.subject_identifier for o in queryset]