meta-edc 0.3.7__py3-none-any.whl → 0.3.15__py3-none-any.whl

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Files changed (129) hide show
  1. meta_auth/auth_objects.py +10 -3
  2. meta_consent/baker_recipes.py +4 -4
  3. meta_consent/consents.py +1 -1
  4. meta_consent/migrations/0025_alter_historicalsubjectconsent_first_name_and_more.py +151 -0
  5. meta_consent/models/signals.py +16 -13
  6. meta_consent/models/subject_consent_v1.py +1 -3
  7. meta_consent/tests/tests/test_form_validators.py +1 -1
  8. meta_dashboard/templates/meta_dashboard/bootstrap3/screening/listboard.html +4 -4
  9. meta_dashboard/templates/meta_dashboard/bootstrap3/subject/listboard.html +1 -2
  10. meta_edc/settings/debug.py +9 -9
  11. meta_edc/settings/defaults.py +25 -18
  12. meta_edc/settings/live.py +1 -9
  13. meta_edc/settings/uat.py +1 -14
  14. meta_edc/templates/meta_edc/bootstrap3/home.html +8 -5
  15. meta_edc/tests/test_settings.py +176 -0
  16. meta_edc/tests/tests/test_endpoints.py +20 -19
  17. meta_edc/urls.py +1 -1
  18. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/METADATA +5 -4
  19. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/RECORD +128 -74
  20. meta_prn/action_items.py +44 -2
  21. meta_prn/admin/__init__.py +3 -0
  22. meta_prn/admin/dm_referral_admin.py +49 -0
  23. meta_prn/admin/offschedule_dm_referral_admin.py +47 -0
  24. meta_prn/admin/onschedule_dm_referral_admin.py +39 -0
  25. meta_prn/baker_recipes.py +8 -1
  26. meta_prn/choices.py +2 -1
  27. meta_prn/constants.py +4 -1
  28. meta_prn/forms/__init__.py +2 -0
  29. meta_prn/forms/dm_referral_form.py +40 -0
  30. meta_prn/forms/offschedule_dm_referral_form.py +35 -0
  31. meta_prn/forms/offschedule_form.py +6 -0
  32. meta_prn/migrations/0057_historicalonscheduledmreferral_and_more.py +1156 -0
  33. meta_prn/migrations/0058_dmreferral_referral_note_and_more.py +29 -0
  34. meta_prn/migrations/0059_alter_historicaloffstudymedication_reason_and_more.py +53 -0
  35. meta_prn/models/__init__.py +13 -2
  36. meta_prn/models/dm_referral.py +39 -0
  37. meta_prn/models/offschedule.py +15 -1
  38. meta_prn/models/onschedule.py +6 -0
  39. meta_prn/models/signals.py +41 -1
  40. meta_prn/tests/tests/test_dm_referral.py +206 -0
  41. meta_screening/form_validators/screening_part_two.py +1 -1
  42. meta_screening/migrations/0062_remove_icpreferral_site_and_more.py +27 -0
  43. meta_screening/migrations/0063_alter_historicalscreeningpartone_fasting_duration_str_and_more.py +184 -0
  44. meta_screening/migrations/0064_remove_historicalscreeningpartone_fasting_duration_minutes_and_more.py +126 -0
  45. meta_screening/migrations/0065_auto_20240516_0352.py +31 -0
  46. meta_screening/migrations/0066_alter_historicalscreeningpartone_fasting_duration_delta_and_more.py +103 -0
  47. meta_screening/models/__init__.py +1 -1
  48. meta_screening/tests/meta_test_case_mixin.py +2 -2
  49. meta_screening/tests/options.py +3 -3
  50. meta_sites/__init__.py +0 -1
  51. meta_sites/sites.py +8 -7
  52. meta_subject/action_items.py +23 -0
  53. meta_subject/admin/__init__.py +1 -1
  54. meta_subject/admin/birth_outcome_admin.py +2 -3
  55. meta_subject/admin/delivery_admin.py +0 -1
  56. meta_subject/admin/diabetes/__init__.py +2 -0
  57. meta_subject/admin/diabetes/dm_diagnosis_admin.py +89 -0
  58. meta_subject/admin/{dm_referral_followup_admin.py → diabetes/dm_followup_admin.py} +15 -8
  59. meta_subject/admin/glucose_admin.py +1 -1
  60. meta_subject/admin/glucose_fbg_admin.py +34 -8
  61. meta_subject/admin/subject_visit_admin.py +4 -1
  62. meta_subject/baker_recipes.py +6 -0
  63. meta_subject/choices.py +8 -0
  64. meta_subject/constants.py +2 -1
  65. meta_subject/form_validators/__init__.py +2 -1
  66. meta_subject/form_validators/dm_diagnosis_form_validator.py +38 -0
  67. meta_subject/form_validators/dm_dx_result_form_validator.py +7 -0
  68. meta_subject/form_validators/{dm_referral_followup_form_validator.py → dm_followup_form_validator.py} +41 -2
  69. meta_subject/forms/__init__.py +1 -0
  70. meta_subject/forms/diabetes/__init__.py +3 -0
  71. meta_subject/forms/diabetes/dm_diagnosis_form.py +13 -0
  72. meta_subject/forms/diabetes/dm_dx_result_form.py +11 -0
  73. meta_subject/forms/diabetes/dm_followup_form.py +25 -0
  74. meta_subject/forms/glucose_fbg_form.py +38 -16
  75. meta_subject/forms/subject_visit_form.py +16 -0
  76. meta_subject/metadata_rules/metadata_rules.py +14 -0
  77. meta_subject/metadata_rules/predicates.py +22 -0
  78. meta_subject/migrations/0181_dmreferralfollowup_action_identifier_and_more.py +143 -0
  79. meta_subject/migrations/0182_rename_dmreferralfollowup_dmfollowup_and_more.py +54 -0
  80. meta_subject/migrations/0183_alter_dmfollowup_on_dm_medications_and_more.py +31 -0
  81. meta_subject/migrations/0184_alter_glucose_options_and_more.py +31 -0
  82. meta_subject/migrations/0185_alter_bloodresultsins_fasting_duration_str_and_more.py +82 -0
  83. meta_subject/migrations/0186_healtheconomicsupdate_singleton_field_and_more.py +55 -0
  84. meta_subject/migrations/0187_dmdiagnosis_historicaldmdiagnosis_dmdxresult_and_more.py +451 -0
  85. meta_subject/migrations/0188_historicaldmdxresult_dmdxresult.py +403 -0
  86. meta_subject/migrations/0189_alter_dmdxresult_options_and_more.py +116 -0
  87. meta_subject/migrations/0190_dmdiagnosis_dx_no_tmg_reason_and_more.py +65 -0
  88. meta_subject/migrations/0191_alter_dmdiagnosis_dx_no_tmg_reason_and_more.py +70 -0
  89. meta_subject/migrations/0192_rename_glucose_quantifier_glucosefbg_fbg_quantifier_and_more.py +44 -0
  90. meta_subject/migrations/0193_alter_glucosefbg_fbg_value_and_more.py +44 -0
  91. meta_subject/migrations/0194_remove_glucosefbg_assay_datetime_and_more.py +166 -0
  92. meta_subject/migrations/0195_alter_glucosefbg_fbg_datetime_and_more.py +27 -0
  93. meta_subject/migrations/0196_glucosefbg_fbg_not_performed_reason_and_more.py +49 -0
  94. meta_subject/migrations/0197_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
  95. meta_subject/migrations/0198_alter_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
  96. meta_subject/migrations/0199_auto_20240516_0247.py +18 -0
  97. meta_subject/migrations/0200_rename_fasting_duration_minutes_bloodresultsins_fasting_duration_delta_and_more.py +43 -0
  98. meta_subject/migrations/0201_alter_bloodresultsins_fasting_duration_delta_and_more.py +58 -0
  99. meta_subject/migrations/0202_auto_20240516_0315.py +32 -0
  100. meta_subject/migrations/0203_alter_bloodresultsins_fasting_duration_delta_and_more.py +67 -0
  101. meta_subject/migrations/0204_glucosefbg_repeat_fbg_date_and_more.py +27 -0
  102. meta_subject/migrations/0205_historicalsubjectrequisition_crf_status_and_more.py +80 -0
  103. meta_subject/migrations/0206_bloodresultsfbc_crf_status_and_more.py +62 -0
  104. meta_subject/models/__init__.py +1 -1
  105. meta_subject/models/blood_results/blood_results_fbc.py +3 -2
  106. meta_subject/models/blood_results/blood_results_hba1c.py +2 -0
  107. meta_subject/models/blood_results/blood_results_ins.py +2 -0
  108. meta_subject/models/blood_results/blood_results_lft.py +2 -0
  109. meta_subject/models/blood_results/blood_results_lipid.py +2 -0
  110. meta_subject/models/blood_results/blood_results_rft.py +2 -0
  111. meta_subject/models/diabetes/__init__.py +3 -0
  112. meta_subject/models/diabetes/dm_diagnosis.py +50 -0
  113. meta_subject/models/diabetes/dm_dx_result.py +70 -0
  114. meta_subject/models/{dm_referral_followup.py → diabetes/dm_followup.py} +18 -6
  115. meta_subject/models/glucose.py +5 -15
  116. meta_subject/models/glucose_fbg.py +40 -51
  117. meta_subject/models/health_economics/health_economics_update.py +2 -0
  118. meta_subject/models/subject_requisition.py +3 -4
  119. meta_subject/tests/tests/test_egfr.py +6 -5
  120. meta_subject/tests/tests/test_metadata_rules.py +32 -2
  121. meta_visit_schedule/constants.py +3 -1
  122. meta_visit_schedule/visit_schedules/phase_three/crfs.py +12 -1
  123. meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +60 -0
  124. meta_visit_schedule/visit_schedules/phase_three/visit_schedule.py +2 -0
  125. meta_subject/forms/dm_referral_followup.py +0 -18
  126. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/AUTHORS +0 -0
  127. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/LICENSE +0 -0
  128. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/WHEEL +0 -0
  129. {meta_edc-0.3.7.dist-info → meta_edc-0.3.15.dist-info}/top_level.txt +0 -0
@@ -0,0 +1,29 @@
1
+ # Generated by Django 4.2.11 on 2024-04-04 16:47
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ("meta_prn", "0057_historicalonscheduledmreferral_and_more"),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AddField(
14
+ model_name="dmreferral",
15
+ name="referral_note",
16
+ field=models.TextField(
17
+ null=True,
18
+ verbose_name="Please provide a brief history of the diabetes diagnosis that lead to this referral",
19
+ ),
20
+ ),
21
+ migrations.AddField(
22
+ model_name="historicaldmreferral",
23
+ name="referral_note",
24
+ field=models.TextField(
25
+ null=True,
26
+ verbose_name="Please provide a brief history of the diabetes diagnosis that lead to this referral",
27
+ ),
28
+ ),
29
+ ]
@@ -0,0 +1,53 @@
1
+ # Generated by Django 5.0.4 on 2024-04-18 23:46
2
+
3
+ from django.db import migrations, models
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ("meta_prn", "0058_dmreferral_referral_note_and_more"),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.AlterField(
14
+ model_name="historicaloffstudymedication",
15
+ name="reason",
16
+ field=models.CharField(
17
+ choices=[
18
+ ("pregnancy", "Pregnancy"),
19
+ ("sae", "Participant is experiencing a serious adverse event"),
20
+ (
21
+ "clinician",
22
+ "Other condition that justifies discontinuation of treatment in the clinician's opinion (specify below)",
23
+ ),
24
+ ("investigator", " Investigator decision"),
25
+ ("referral", "Referral to Diabetes clinic"),
26
+ ("patient", "Patient decision"),
27
+ ("OTHER", "Other reason (specify below)"),
28
+ ],
29
+ max_length=25,
30
+ verbose_name="Reason for stopping study medication",
31
+ ),
32
+ ),
33
+ migrations.AlterField(
34
+ model_name="offstudymedication",
35
+ name="reason",
36
+ field=models.CharField(
37
+ choices=[
38
+ ("pregnancy", "Pregnancy"),
39
+ ("sae", "Participant is experiencing a serious adverse event"),
40
+ (
41
+ "clinician",
42
+ "Other condition that justifies discontinuation of treatment in the clinician's opinion (specify below)",
43
+ ),
44
+ ("investigator", " Investigator decision"),
45
+ ("referral", "Referral to Diabetes clinic"),
46
+ ("patient", "Patient decision"),
47
+ ("OTHER", "Other reason (specify below)"),
48
+ ],
49
+ max_length=25,
50
+ verbose_name="Reason for stopping study medication",
51
+ ),
52
+ ),
53
+ ]
@@ -1,8 +1,19 @@
1
+ from .dm_referral import DmReferral
1
2
  from .end_of_study import EndOfStudy
2
3
  from .loss_to_followup import LossToFollowup
3
4
  from .off_study_medication import OffStudyMedication
4
- from .offschedule import OffSchedule, OffSchedulePostnatal, OffSchedulePregnancy
5
- from .onschedule import OnSchedule, OnSchedulePostnatal, OnSchedulePregnancy
5
+ from .offschedule import (
6
+ OffSchedule,
7
+ OffScheduleDmReferral,
8
+ OffSchedulePostnatal,
9
+ OffSchedulePregnancy,
10
+ )
11
+ from .onschedule import (
12
+ OnSchedule,
13
+ OnScheduleDmReferral,
14
+ OnSchedulePostnatal,
15
+ OnSchedulePregnancy,
16
+ )
6
17
  from .pregnancy_notification import PregnancyNotification
7
18
  from .protocol_incident import ProtocolIncident
8
19
  from .signals import (
@@ -0,0 +1,39 @@
1
+ from django.db import models
2
+ from edc_action_item.models import ActionModelMixin
3
+ from edc_identifier.model_mixins import UniqueSubjectIdentifierFieldMixin
4
+ from edc_model.models import BaseUuidModel
5
+ from edc_sites.model_mixins import SiteModelMixin
6
+ from edc_utils.date import get_utcnow
7
+
8
+ from ..constants import DM_REFFERAL_ACTION
9
+
10
+
11
+ class DmReferral(
12
+ SiteModelMixin,
13
+ ActionModelMixin,
14
+ UniqueSubjectIdentifierFieldMixin,
15
+ BaseUuidModel,
16
+ ):
17
+
18
+ action_name = DM_REFFERAL_ACTION
19
+
20
+ report_datetime = models.DateTimeField(
21
+ verbose_name="Report date and time", default=get_utcnow
22
+ )
23
+
24
+ referral_date = models.DateField(
25
+ verbose_name="Date of referral to diabetes clinic",
26
+ )
27
+
28
+ referral_note = models.TextField(
29
+ verbose_name=(
30
+ "Please provide a brief history of the "
31
+ "diabetes diagnosis that lead to this referral"
32
+ ),
33
+ null=True,
34
+ blank=False,
35
+ )
36
+
37
+ class Meta(ActionModelMixin.Meta, BaseUuidModel.Meta):
38
+ verbose_name = "Diabetes referral"
39
+ verbose_name_plural = "Diabetes referral"
@@ -4,7 +4,11 @@ from edc_sites.model_mixins import SiteModelMixin
4
4
  from edc_visit_schedule.constants import OFFSCHEDULE_ACTION
5
5
  from edc_visit_schedule.model_mixins import OffScheduleModelMixin
6
6
 
7
- from ..constants import OFFSCHEDULE_POSTNATAL_ACTION, OFFSCHEDULE_PREGNANCY_ACTION
7
+ from ..constants import (
8
+ OFFSCHEDULE_DM_REFERRAL_ACTION,
9
+ OFFSCHEDULE_POSTNATAL_ACTION,
10
+ OFFSCHEDULE_PREGNANCY_ACTION,
11
+ )
8
12
 
9
13
 
10
14
  class OffSchedule(SiteModelMixin, ActionModelMixin, OffScheduleModelMixin, BaseUuidModel):
@@ -34,3 +38,13 @@ class OffSchedulePostnatal(
34
38
  class Meta(OffScheduleModelMixin.Meta, BaseUuidModel.Meta):
35
39
  verbose_name = "Off-schedule: post-natal"
36
40
  verbose_name_plural = "Off-schedule: post-natal"
41
+
42
+
43
+ class OffScheduleDmReferral(
44
+ SiteModelMixin, ActionModelMixin, OffScheduleModelMixin, BaseUuidModel
45
+ ):
46
+ action_name = OFFSCHEDULE_DM_REFERRAL_ACTION
47
+
48
+ class Meta(OffScheduleModelMixin.Meta, BaseUuidModel.Meta):
49
+ verbose_name = "Off-schedule: DM Referral"
50
+ verbose_name_plural = "Off-schedule: DM Referral"
@@ -18,3 +18,9 @@ class OnSchedulePregnancy(OnScheduleModelMixin, SiteModelMixin, BaseUuidModel):
18
18
  class OnSchedulePostnatal(OnScheduleModelMixin, SiteModelMixin, BaseUuidModel):
19
19
  class Meta(OnScheduleModelMixin.Meta):
20
20
  pass
21
+
22
+
23
+ class OnScheduleDmReferral(OnScheduleModelMixin, SiteModelMixin, BaseUuidModel):
24
+ class Meta(OnScheduleModelMixin.Meta, BaseUuidModel.Meta):
25
+ verbose_name = "On-schedule: DM Referral"
26
+ verbose_name_plural = "On-schedule: DM Referral"
@@ -5,8 +5,15 @@ from edc_constants.constants import YES
5
5
  from edc_visit_schedule.site_visit_schedules import site_visit_schedules
6
6
 
7
7
  from meta_subject.models import SubjectVisit, UrinePregnancy
8
- from meta_visit_schedule.constants import SCHEDULE, SCHEDULE_PREGNANCY, VISIT_SCHEDULE
8
+ from meta_visit_schedule.constants import (
9
+ SCHEDULE,
10
+ SCHEDULE_DM_REFERRAL,
11
+ SCHEDULE_PREGNANCY,
12
+ VISIT_SCHEDULE,
13
+ )
9
14
 
15
+ from . import OffScheduleDmReferral
16
+ from .dm_referral import DmReferral
10
17
  from .offschedule import OffSchedule
11
18
  from .pregnancy_notification import PregnancyNotification
12
19
 
@@ -63,3 +70,36 @@ def update_urine_pregnancy_on_pregnancy_notification_on_post_save(
63
70
  notified_datetime=instance.report_datetime,
64
71
  notified=True,
65
72
  )
73
+
74
+
75
+ @receiver(
76
+ post_save,
77
+ weak=False,
78
+ sender=DmReferral,
79
+ dispatch_uid="update_schedule_on_dm_referral_post_save",
80
+ )
81
+ def update_schedule_on_dm_referral_post_save(sender, instance, raw, **kwargs):
82
+ if not raw:
83
+ try:
84
+ OffScheduleDmReferral.objects.get(subject_identifier=instance.subject_identifier)
85
+ except ObjectDoesNotExist:
86
+ last_subject_visit = (
87
+ SubjectVisit.objects.filter(
88
+ subject_identifier=instance.subject_identifier,
89
+ schedule_name=SCHEDULE,
90
+ )
91
+ .order_by("report_datetime")
92
+ .last()
93
+ )
94
+ visit_schedule = site_visit_schedules.get_visit_schedule(
95
+ visit_schedule_name=VISIT_SCHEDULE
96
+ )
97
+ schedule = visit_schedule.schedules.get(SCHEDULE)
98
+ schedule.take_off_schedule(
99
+ instance.subject_identifier, last_subject_visit.report_datetime
100
+ )
101
+ schedule = visit_schedule.schedules.get(SCHEDULE_DM_REFERRAL)
102
+ schedule.put_on_schedule(
103
+ onschedule_datetime=last_subject_visit.report_datetime,
104
+ subject_identifier=instance.subject_identifier,
105
+ )
@@ -0,0 +1,206 @@
1
+ from dateutil.relativedelta import relativedelta
2
+ from django.core.exceptions import ObjectDoesNotExist
3
+ from django.test import TestCase, tag
4
+ from edc_action_item.models import ActionItem
5
+ from edc_appointment.constants import COMPLETE_APPT
6
+ from edc_appointment.models import Appointment
7
+ from edc_constants.constants import CLOSED, FEMALE, NEW, NO, PATIENT, YES
8
+ from edc_pharmacy.constants import IN_PROGRESS_APPT
9
+ from edc_utils import get_utcnow
10
+ from edc_visit_schedule.constants import MONTH1, OFFSCHEDULE_ACTION
11
+ from edc_visit_tracking.constants import SCHEDULED
12
+
13
+ from meta_lists.models import MissedReferralReasons
14
+ from meta_prn.constants import (
15
+ OFFSCHEDULE_DM_REFERRAL_ACTION,
16
+ OFFSTUDY_MEDICATION_ACTION,
17
+ )
18
+ from meta_prn.models import DmReferral, OnScheduleDmReferral
19
+ from meta_screening.tests.meta_test_case_mixin import MetaTestCaseMixin
20
+ from meta_subject.constants import DM_FOLLOWUP_ACTION
21
+ from meta_subject.models import DmDiagnosis, DmFollowup, SubjectVisit
22
+ from meta_visit_schedule.constants import DM_BASELINE, DM_FOLLOWUP, SCHEDULE_DM_REFERRAL
23
+
24
+
25
+ @tag("1")
26
+ class TestDmReferral(MetaTestCaseMixin, TestCase):
27
+ def setUp(self):
28
+ super().setUp()
29
+ self.subject_visit = self.get_subject_visit(gender=FEMALE)
30
+
31
+ def test_dm_referral_puts_subject_on_dm_followup_schedule(self):
32
+ subject_visit = self.get_next_subject_visit(self.subject_visit)
33
+ subject_visit = self.get_next_subject_visit(subject_visit)
34
+ self.assertEqual(subject_visit.visit_code, MONTH1)
35
+ dm_referral = DmReferral.objects.create(
36
+ subject_identifier=subject_visit.subject_identifier,
37
+ report_datetime=get_utcnow(),
38
+ referral_date=get_utcnow(),
39
+ )
40
+ self.assertIsNotNone(dm_referral.report_datetime)
41
+ self.assertIsNotNone(dm_referral.referral_date)
42
+ self.assertIsNotNone(dm_referral.action_identifier)
43
+
44
+ # verify subject is on DM Followup schedule
45
+ try:
46
+ OnScheduleDmReferral.objects.get(
47
+ subject_identifier=subject_visit.subject_identifier
48
+ )
49
+ except ObjectDoesNotExist:
50
+ self.fail("OnScheduleDmReferral unexpectedly does not exist")
51
+
52
+ @tag("1")
53
+ def test_dm_referral_action_creates_offschedule_action(self):
54
+ subject_visit = self.get_next_subject_visit(self.subject_visit)
55
+ subject_visit = self.get_next_subject_visit(subject_visit)
56
+ self.assertEqual(subject_visit.visit_code, MONTH1)
57
+ dm_referral = DmReferral.objects.create(
58
+ subject_identifier=subject_visit.subject_identifier,
59
+ report_datetime=get_utcnow(),
60
+ referral_date=get_utcnow(),
61
+ )
62
+ self.assertIsNotNone(dm_referral.report_datetime)
63
+ self.assertIsNotNone(dm_referral.referral_date)
64
+ self.assertIsNotNone(dm_referral.action_identifier)
65
+
66
+ try:
67
+ ActionItem.objects.get(
68
+ subject_identifier=subject_visit.subject_identifier,
69
+ action_type__name=OFFSCHEDULE_ACTION,
70
+ status=CLOSED,
71
+ )
72
+ except ObjectDoesNotExist:
73
+ self.fail(f"{OFFSCHEDULE_ACTION} Action item unexpectedly does not exist")
74
+
75
+ def test_dm_referral_creates_offstudy_med_action(self):
76
+ subject_visit = self.get_next_subject_visit(self.subject_visit)
77
+ subject_visit = self.get_next_subject_visit(subject_visit)
78
+ self.assertEqual(subject_visit.visit_code, MONTH1)
79
+ dm_referral = DmReferral.objects.create(
80
+ subject_identifier=subject_visit.subject_identifier,
81
+ report_datetime=get_utcnow(),
82
+ referral_date=get_utcnow(),
83
+ )
84
+ self.assertIsNotNone(dm_referral.report_datetime)
85
+ self.assertIsNotNone(dm_referral.referral_date)
86
+ self.assertIsNotNone(dm_referral.action_identifier)
87
+
88
+ # verify action items are created
89
+ try:
90
+ ActionItem.objects.get(
91
+ subject_identifier=subject_visit.subject_identifier,
92
+ action_type__name=OFFSTUDY_MEDICATION_ACTION,
93
+ status=NEW,
94
+ )
95
+ except ObjectDoesNotExist:
96
+ self.fail(f"{OFFSTUDY_MEDICATION_ACTION} Action item unexpectedly does not exist")
97
+
98
+ def test_dm_referral_creates_dm_followup_action(self):
99
+ subject_visit = self.get_next_subject_visit(self.subject_visit)
100
+ subject_visit = self.get_next_subject_visit(subject_visit)
101
+ self.assertEqual(subject_visit.visit_code, MONTH1)
102
+ dm_referral = DmReferral.objects.create(
103
+ subject_identifier=subject_visit.subject_identifier,
104
+ report_datetime=get_utcnow(),
105
+ referral_date=get_utcnow(),
106
+ )
107
+ self.assertIsNotNone(dm_referral.report_datetime)
108
+ self.assertIsNotNone(dm_referral.referral_date)
109
+ self.assertIsNotNone(dm_referral.action_identifier)
110
+
111
+ try:
112
+ ActionItem.objects.get(
113
+ subject_identifier=subject_visit.subject_identifier,
114
+ action_type__name=DM_FOLLOWUP_ACTION,
115
+ status=NEW,
116
+ )
117
+ except ObjectDoesNotExist:
118
+ self.fail(f"{DM_FOLLOWUP_ACTION} Action item unexpectedly does not exist")
119
+
120
+ @tag("1")
121
+ def test_dm_referral2(self):
122
+ subject_visit = self.get_next_subject_visit(self.subject_visit)
123
+ subject_visit = self.get_next_subject_visit(subject_visit)
124
+ self.assertEqual(subject_visit.visit_code, MONTH1)
125
+ referral_datetime = subject_visit.report_datetime
126
+ DmReferral.objects.create(
127
+ subject_identifier=subject_visit.subject_identifier,
128
+ report_datetime=referral_datetime,
129
+ referral_date=referral_datetime.date(),
130
+ )
131
+
132
+ # Add DM Baseline
133
+ appointment = Appointment.objects.get(
134
+ subject_identifier=subject_visit.subject_identifier,
135
+ schedule_name=SCHEDULE_DM_REFERRAL,
136
+ visit_code=DM_BASELINE,
137
+ )
138
+ appointment.appt_status = IN_PROGRESS_APPT
139
+ appointment.save()
140
+
141
+ subject_visit = SubjectVisit.objects.create(
142
+ appointment=appointment,
143
+ subject_identifier=subject_visit.subject_identifier,
144
+ report_datetime=appointment.appt_datetime,
145
+ reason=SCHEDULED,
146
+ info_source=PATIENT,
147
+ )
148
+
149
+ DmDiagnosis.objects.create(
150
+ subject_visit=subject_visit,
151
+ report_datetime=get_utcnow(),
152
+ dx_date=referral_datetime.date(),
153
+ dx_initiated_by="fbg_confirmed",
154
+ dx_tmg=YES,
155
+ dx_tmg_date=referral_datetime.date(),
156
+ )
157
+
158
+ # Add DM Followup
159
+ followup_datetime = referral_datetime + relativedelta(months=6)
160
+ appointment = Appointment.objects.get(
161
+ subject_identifier=subject_visit.subject_identifier,
162
+ schedule_name=SCHEDULE_DM_REFERRAL,
163
+ visit_code=DM_FOLLOWUP,
164
+ )
165
+ appointment.appt_status = IN_PROGRESS_APPT
166
+ appointment.save()
167
+
168
+ subject_visit = SubjectVisit.objects.create(
169
+ appointment=appointment,
170
+ subject_identifier=subject_visit.subject_identifier,
171
+ report_datetime=appointment.appt_datetime,
172
+ reason=SCHEDULED,
173
+ info_source=PATIENT,
174
+ )
175
+
176
+ dm_followup = DmFollowup.objects.create(
177
+ subject_visit=subject_visit,
178
+ report_datetime=followup_datetime,
179
+ referral_date=referral_datetime.date(),
180
+ attended=NO,
181
+ on_dm_medications=NO,
182
+ )
183
+ dm_followup.missed_referral_reasons.set([MissedReferralReasons.objects.all()[0]])
184
+
185
+ appointment.appt_status = COMPLETE_APPT
186
+ appointment.save()
187
+
188
+ try:
189
+ ActionItem.objects.get(
190
+ subject_identifier=subject_visit.subject_identifier,
191
+ action_type__name=DM_FOLLOWUP_ACTION,
192
+ status=CLOSED,
193
+ )
194
+ except ObjectDoesNotExist:
195
+ self.fail(f"{DM_FOLLOWUP_ACTION} Action item unexpectedly does not exist")
196
+
197
+ try:
198
+ ActionItem.objects.get(
199
+ subject_identifier=subject_visit.subject_identifier,
200
+ action_type__name=OFFSCHEDULE_DM_REFERRAL_ACTION,
201
+ status=NEW,
202
+ )
203
+ except ObjectDoesNotExist:
204
+ self.fail(
205
+ f"{OFFSCHEDULE_DM_REFERRAL_ACTION} Action item unexpectedly does not exist"
206
+ )
@@ -80,7 +80,7 @@ class ScreeningPartTwoFormValidator(PrnFormValidatorMixin, FormValidator):
80
80
  {
81
81
  self.report_datetime_field_attr: (
82
82
  "Cannot be before `Part One` report datetime. "
83
- f"Expected date after {dte}."
83
+ f"Expected date after {dte}. Got {self.report_datetime}"
84
84
  )
85
85
  },
86
86
  INVALID_ERROR,
@@ -0,0 +1,27 @@
1
+ # Generated by Django 4.2.11 on 2024-03-27 19:41
2
+
3
+ from django.db import migrations
4
+
5
+
6
+ class Migration(migrations.Migration):
7
+
8
+ dependencies = [
9
+ ("meta_screening", "0061_alter_historicalicpreferral_site_and_more"),
10
+ ]
11
+
12
+ operations = [
13
+ migrations.RemoveField(
14
+ model_name="icpreferral",
15
+ name="site",
16
+ ),
17
+ migrations.RemoveField(
18
+ model_name="icpreferral",
19
+ name="subject_screening",
20
+ ),
21
+ migrations.DeleteModel(
22
+ name="HistoricalIcpReferral",
23
+ ),
24
+ migrations.DeleteModel(
25
+ name="IcpReferral",
26
+ ),
27
+ ]
@@ -0,0 +1,184 @@
1
+ # Generated by Django 5.0.4 on 2024-04-18 23:46
2
+
3
+ import django.core.validators
4
+ from django.db import migrations, models
5
+
6
+
7
+ class Migration(migrations.Migration):
8
+
9
+ dependencies = [
10
+ ("meta_screening", "0062_remove_icpreferral_site_and_more"),
11
+ ]
12
+
13
+ operations = [
14
+ migrations.AlterField(
15
+ model_name="historicalscreeningpartone",
16
+ name="fasting_duration_str",
17
+ field=models.CharField(
18
+ blank=True,
19
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
20
+ max_length=8,
21
+ null=True,
22
+ validators=[
23
+ django.core.validators.RegexValidator(
24
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
25
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
26
+ )
27
+ ],
28
+ verbose_name="How long have they fasted in hours and/or minutes?",
29
+ ),
30
+ ),
31
+ migrations.AlterField(
32
+ model_name="historicalscreeningpartone",
33
+ name="repeat_fasting_duration_str",
34
+ field=models.CharField(
35
+ blank=True,
36
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
37
+ max_length=8,
38
+ null=True,
39
+ validators=[
40
+ django.core.validators.RegexValidator(
41
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
42
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
43
+ )
44
+ ],
45
+ verbose_name="How long have they fasted in hours and/or minutes?",
46
+ ),
47
+ ),
48
+ migrations.AlterField(
49
+ model_name="historicalscreeningpartthree",
50
+ name="fasting_duration_str",
51
+ field=models.CharField(
52
+ blank=True,
53
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
54
+ max_length=8,
55
+ null=True,
56
+ validators=[
57
+ django.core.validators.RegexValidator(
58
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
59
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
60
+ )
61
+ ],
62
+ verbose_name="How long have they fasted in hours and/or minutes?",
63
+ ),
64
+ ),
65
+ migrations.AlterField(
66
+ model_name="historicalscreeningpartthree",
67
+ name="repeat_fasting_duration_str",
68
+ field=models.CharField(
69
+ blank=True,
70
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
71
+ max_length=8,
72
+ null=True,
73
+ validators=[
74
+ django.core.validators.RegexValidator(
75
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
76
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
77
+ )
78
+ ],
79
+ verbose_name="How long have they fasted in hours and/or minutes?",
80
+ ),
81
+ ),
82
+ migrations.AlterField(
83
+ model_name="historicalscreeningparttwo",
84
+ name="fasting_duration_str",
85
+ field=models.CharField(
86
+ blank=True,
87
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
88
+ max_length=8,
89
+ null=True,
90
+ validators=[
91
+ django.core.validators.RegexValidator(
92
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
93
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
94
+ )
95
+ ],
96
+ verbose_name="How long have they fasted in hours and/or minutes?",
97
+ ),
98
+ ),
99
+ migrations.AlterField(
100
+ model_name="historicalscreeningparttwo",
101
+ name="repeat_fasting_duration_str",
102
+ field=models.CharField(
103
+ blank=True,
104
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
105
+ max_length=8,
106
+ null=True,
107
+ validators=[
108
+ django.core.validators.RegexValidator(
109
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
110
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
111
+ )
112
+ ],
113
+ verbose_name="How long have they fasted in hours and/or minutes?",
114
+ ),
115
+ ),
116
+ migrations.AlterField(
117
+ model_name="historicalsubjectscreening",
118
+ name="fasting_duration_str",
119
+ field=models.CharField(
120
+ blank=True,
121
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
122
+ max_length=8,
123
+ null=True,
124
+ validators=[
125
+ django.core.validators.RegexValidator(
126
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
127
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
128
+ )
129
+ ],
130
+ verbose_name="How long have they fasted in hours and/or minutes?",
131
+ ),
132
+ ),
133
+ migrations.AlterField(
134
+ model_name="historicalsubjectscreening",
135
+ name="repeat_fasting_duration_str",
136
+ field=models.CharField(
137
+ blank=True,
138
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
139
+ max_length=8,
140
+ null=True,
141
+ validators=[
142
+ django.core.validators.RegexValidator(
143
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
144
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
145
+ )
146
+ ],
147
+ verbose_name="How long have they fasted in hours and/or minutes?",
148
+ ),
149
+ ),
150
+ migrations.AlterField(
151
+ model_name="subjectscreening",
152
+ name="fasting_duration_str",
153
+ field=models.CharField(
154
+ blank=True,
155
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
156
+ max_length=8,
157
+ null=True,
158
+ validators=[
159
+ django.core.validators.RegexValidator(
160
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
161
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
162
+ )
163
+ ],
164
+ verbose_name="How long have they fasted in hours and/or minutes?",
165
+ ),
166
+ ),
167
+ migrations.AlterField(
168
+ model_name="subjectscreening",
169
+ name="repeat_fasting_duration_str",
170
+ field=models.CharField(
171
+ blank=True,
172
+ help_text="As reported by patient. Duration of fast. Format is `HHhMMm`. For example 1h23m, 12h7m, etc",
173
+ max_length=8,
174
+ null=True,
175
+ validators=[
176
+ django.core.validators.RegexValidator(
177
+ "^([0-9]{1,3}h([0-5]?[0-9]m)?)$",
178
+ message="Invalid format. Expected something like 1h20m, 11h5m, etc. No spaces allowed.",
179
+ )
180
+ ],
181
+ verbose_name="How long have they fasted in hours and/or minutes?",
182
+ ),
183
+ ),
184
+ ]