megadetector 5.0.10__py3-none-any.whl → 5.0.12__py3-none-any.whl

{detection → megadetector/detection}/run_inference_with_yolov5_val.py

@@ -55,11 +55,11 @@ import json
 
 from tqdm import tqdm
 
-from md_utils import path_utils
-from md_utils import process_utils
-from md_utils import string_utils
-from data_management import yolo_output_to_md_output
-from detection.run_detector import try_download_known_detector
+from megadetector.utils import path_utils
+from megadetector.utils import process_utils
+from megadetector.utils import string_utils
+from megadetector.data_management import yolo_output_to_md_output
+from megadetector.detection.run_detector import try_download_known_detector
 
 default_image_size_with_augmentation = int(1280 * 1.3)
 default_image_size_with_no_augmentation = 1280
@@ -548,7 +548,7 @@ def run_inference_with_yolo_val(options):
 #%% Command-line driver
 
 import argparse
-from md_utils.ct_utils import args_to_object
+from megadetector.utils.ct_utils import args_to_object
 
 def main():
     
@@ -811,8 +811,8 @@ if False:
     postprocessing_output_folder = os.path.join(output_folder,'yolo-val-preview')
     md_json_file = options.output_file
     
-    from api.batch_processing.postprocessing.postprocess_batch_results import (
-        PostProcessingOptions, process_batch_results)
+    from megadetector.postprocessing.postprocess_batch_results import \
+        PostProcessingOptions, process_batch_results
     
     with open(md_json_file,'r') as f:
         d = json.load(f)
@@ -839,7 +839,7 @@ if False:
     os.makedirs(output_base, exist_ok=True)
     print('Processing to {}'.format(output_base))
     
-    pp_options.api_output_file = md_json_file
+    pp_options.md_results_file = md_json_file
     pp_options.output_dir = output_base
     ppresults = process_batch_results(pp_options)
     html_output_file = ppresults.output_html_file
@@ -853,8 +853,8 @@ if False:
     
     import itertools
     
-    from api.batch_processing.postprocessing.compare_batch_results import (
-        BatchComparisonOptions,PairwiseBatchComparisonOptions,compare_batch_results)
+    from megadetector.postprocessing.compare_batch_results import \
+        BatchComparisonOptions,PairwiseBatchComparisonOptions,compare_batch_results
     
     options = BatchComparisonOptions()
     
@@ -913,5 +913,5 @@ if False:
     
     results = compare_batch_results(options)
     
-    from md_utils.path_utils import open_file
+    from megadetector.utils.path_utils import open_file
     open_file(results.html_output_file)

{detection → megadetector/detection}/run_tiled_inference.py

@@ -29,15 +29,14 @@ import json
 
 from tqdm import tqdm
 
-from detection.run_inference_with_yolov5_val import YoloInferenceOptions,run_inference_with_yolo_val
-from detection.run_detector_batch import load_and_run_detector_batch,write_results_to_file
-from detection.run_detector import try_download_known_detector
-
 import torch
 from torchvision import ops
 
-from md_utils import path_utils
-from md_visualization import visualization_utils as vis_utils
+from megadetector.detection.run_inference_with_yolov5_val import YoloInferenceOptions,run_inference_with_yolo_val
+from megadetector.detection.run_detector_batch import load_and_run_detector_batch,write_results_to_file
+from megadetector.detection.run_detector import try_download_known_detector
+from megadetector.utils import path_utils
+from megadetector.visualization import visualization_utils as vis_utils
 
 default_patch_overlap = 0.5
 patch_jpeg_quality = 95
@@ -821,8 +820,8 @@ if False:
     
     #%% Preview tiled inference
     
-    from api.batch_processing.postprocessing.postprocess_batch_results import (
-        PostProcessingOptions, process_batch_results)
+    from megadetector.postprocessing.postprocess_batch_results import \
+        PostProcessingOptions, process_batch_results
 
     options = PostProcessingOptions()
     options.image_base_dir = image_folder
@@ -843,7 +842,7 @@ if False:
 
     print('Processing post-RDE to {}'.format(preview_base))
 
-    options.api_output_file = output_file
+    options.md_results_file = output_file
     options.output_dir = preview_base
     ppresults = process_batch_results(options)
     html_output_file = ppresults.output_html_file

{detection → megadetector/detection}/tf_detector.py

@@ -10,8 +10,9 @@ Module containing the class TFDetector, for loading and running a TensorFlow det
 
 import numpy as np
 
-from detection.run_detector import CONF_DIGITS, COORD_DIGITS, FAILURE_INFER
-from md_utils.ct_utils import truncate_float
+from megadetector.detection.run_detector import \
+    CONF_DIGITS, COORD_DIGITS, FAILURE_INFER
+from megadetector.utils.ct_utils import truncate_float
 
 import tensorflow.compat.v1 as tf
 

{detection → megadetector/detection}/video_utils.py

@@ -19,8 +19,8 @@ from multiprocessing.pool import Pool
 from tqdm import tqdm
 from functools import partial
 
-from md_utils import path_utils    
-from md_visualization import visualization_utils as vis_utils
+from megadetector.utils import path_utils    
+from megadetector.visualization import visualization_utils as vis_utils
 
 default_fourcc = 'h264'
 

{api/batch_processing → megadetector}/postprocessing/add_max_conf.py

@@ -15,7 +15,7 @@ to add it back to an existing .json file.
 
 import os
 import json
-from md_utils import ct_utils
+from megadetector.utils import ct_utils
 
 
 #%% Main function

{api/batch_processing → megadetector}/postprocessing/categorize_detections_by_size.py

@@ -116,7 +116,7 @@ def categorize_detections_by_size(input_file,output_file=None,options=None):
                (d['category'] not in options.categories_to_separate):
                 continue
                
-            # https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing#detector-outputs
+            # https://github.com/agentmorris/MegaDetector/tree/main/megadetector/api/batch_processing#detector-outputs
             w = d['bbox'][2]
             h = d['bbox'][3]
             detection_size = w*h

{api/batch_processing → megadetector}/postprocessing/combine_api_outputs.py

@@ -11,7 +11,7 @@ writing the results to another .json file.
 
 File format:
 
-https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing#batch-processing-api-output-format
+https://github.com/agentmorris/MegaDetector/tree/main/megadetector/api/batch_processing#batch-processing-api-output-format
 
 Command-line use:
 

{api/batch_processing → megadetector}/postprocessing/compare_batch_results.py

@@ -30,9 +30,9 @@ from functools import partial
 from multiprocessing.pool import ThreadPool
 from multiprocessing.pool import Pool
 
-from md_visualization import visualization_utils
-from md_utils.write_html_image_list import write_html_image_list
-from md_utils import path_utils
+from megadetector.visualization import visualization_utils
+from megadetector.utils.write_html_image_list import write_html_image_list
+from megadetector.utils import path_utils
 
 
 #%% Constants and support classes
@@ -833,7 +833,7 @@ if False:
     
     results = n_way_comparison(filenames,options,detection_thresholds,rendering_thresholds=rendering_thresholds)
     
-    from md_utils.path_utils import open_file
+    from megadetector.utils.path_utils import open_file
     open_file(results.html_output_file)
 
     
@@ -859,7 +859,7 @@ if False:
 
     results = n_way_comparison(filenames,options,detection_thresholds,rendering_thresholds=None)
     
-    from md_utils.path_utils import open_file
+    from megadetector.utils.path_utils import open_file
     open_file(results.html_output_file)
 
 

{api/batch_processing → megadetector}/postprocessing/convert_output_format.py

@@ -21,10 +21,9 @@ import os
 
 from tqdm import tqdm
 
-from api.batch_processing.postprocessing.load_api_results import load_api_results_csv
-from data_management.annotations import annotation_constants
-
-from md_utils import ct_utils
+from megadetector.postprocessing.load_api_results import load_api_results_csv
+from megadetector.data_management.annotations import annotation_constants
+from megadetector.utils import ct_utils
 
 CONF_DIGITS = 3
 
@@ -242,7 +241,7 @@ def convert_csv_to_json(input_path,output_path=None,overwrite=True):
             
     # Format spec:
     #
-    # https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing
+    # https://github.com/agentmorris/MegaDetector/tree/main/megadetector/api/batch_processing
     
     print('Loading csv results...')
     df = load_api_results_csv(input_path)

{api/batch_processing → megadetector}/postprocessing/load_api_results.py

@@ -22,7 +22,7 @@ from typing import Dict, Mapping, Optional, Tuple
 
 import pandas as pd
 
-from md_utils import ct_utils
+from megadetector.utils import ct_utils
 
 
 #%% Functions for loading .json results into a Pandas DataFrame, and writing back to .json

{api/batch_processing → megadetector}/postprocessing/md_to_coco.py

@@ -17,7 +17,7 @@ import uuid
 
 from tqdm import tqdm
 
-from md_visualization import visualization_utils as vis_utils
+from megadetector.visualization import visualization_utils as vis_utils
 
 default_confidence_threshold = 0.15
 
@@ -231,7 +231,7 @@ if False:
     
     #%% Preview the resulting file
     
-    from md_visualization import visualize_db
+    from megadetector.visualization import visualize_db
     options = visualize_db.DbVizOptions()
     options.parallelize_rendering = True
     options.viz_size = (900, -1)
@@ -241,7 +241,7 @@ if False:
                                               os.path.expanduser('~/tmp/md_to_coco_preview'),
                                               image_folder,options)    
 
-    from md_utils import path_utils # noqa
+    from megadetector.utils import path_utils # noqa
     path_utils.open_file(html_file)
     
     

{api/batch_processing → megadetector}/postprocessing/md_to_labelme.py

@@ -24,9 +24,9 @@ from multiprocessing.pool import Pool
 from multiprocessing.pool import ThreadPool
 from functools import partial
 
-from md_visualization.visualization_utils import open_image
-from md_utils.ct_utils import truncate_float
-from detection.run_detector import DEFAULT_DETECTOR_LABEL_MAP
+from megadetector.visualization.visualization_utils import open_image
+from megadetector.utils.ct_utils import truncate_float
+from megadetector.detection.run_detector import DEFAULT_DETECTOR_LABEL_MAP
 
 output_precision = 3
 default_confidence_threshold = 0.15

{api/batch_processing → megadetector}/postprocessing/merge_detections.py

@@ -22,7 +22,7 @@ import os
 
 from tqdm import tqdm
 
-from md_utils.ct_utils import get_iou
+from megadetector.utils.ct_utils import get_iou
 
 
 #%% Structs

{api/batch_processing → megadetector}/postprocessing/postprocess_batch_results.py

@@ -13,7 +13,7 @@ Given a .json or .csv file containing MD results, do one or more of the followin
 
 Ground truth, if available, must be in COCO Camera Traps format:
     
-https://github.com/agentmorris/MegaDetector/blob/main/data_management/README.md#coco-camera-traps-format
+https://github.com/agentmorris/MegaDetector/blob/main/megadetector/data_management/README.md#coco-camera-traps-format
 
 """
 
@@ -44,16 +44,14 @@ import pandas as pd
 from sklearn.metrics import precision_recall_curve, confusion_matrix, average_precision_score
 from tqdm import tqdm
 
-import md_visualization.visualization_utils as vis_utils
-import md_visualization.plot_utils as plot_utils
-
-from md_utils.write_html_image_list import write_html_image_list
-from md_utils import path_utils
-from data_management.cct_json_utils import (CameraTrapJsonUtils, IndexedJsonDb)
-from api.batch_processing.postprocessing.load_api_results import load_api_results
-from md_utils.ct_utils import args_to_object, sets_overlap
-
-from detection.run_detector import get_typical_confidence_threshold_from_results
+from megadetector.visualization import visualization_utils as vis_utils
+from megadetector.visualization import plot_utils
+from megadetector.utils.write_html_image_list import write_html_image_list
+from megadetector.utils import path_utils
+from megadetector.utils.ct_utils import args_to_object, sets_overlap
+from megadetector.data_management.cct_json_utils import (CameraTrapJsonUtils, IndexedJsonDb)
+from megadetector.postprocessing.load_api_results import load_api_results
+from megadetector.detection.run_detector import get_typical_confidence_threshold_from_results
 
 warnings.filterwarnings('ignore', '(Possibly )?corrupt EXIF data', UserWarning)
 
@@ -394,7 +392,7 @@ def _render_bounding_boxes(
     Renders detection bounding boxes on a single image.
     
     This is an internal function; if you want tools for rendering boxes on images, see 
-    md_visualization.visualization_utils.
+    visualization.visualization_utils.
 
     The source image is:
 
@@ -896,7 +894,7 @@ def process_batch_results(options):
 
     Ground truth, if available, must be in COCO Camera Traps format:
         
-    https://github.com/agentmorris/MegaDetector/blob/main/data_management/README.md#coco-camera-traps-format
+    https://github.com/agentmorris/MegaDetector/blob/main/megadetector/data_management/README.md#coco-camera-traps-format
 
     Args:
         options (PostProcessingOptions): everything we need to render a preview/analysis for
@@ -951,7 +949,7 @@ def process_batch_results(options):
     # If the caller hasn't supplied results, load them
     if options.api_detection_results is None:
         detections_df, other_fields = load_api_results(
-            options.api_output_file, force_forward_slashes=True,
+            options.md_results_file, force_forward_slashes=True,
             filename_replacements=options.api_output_filename_replacements)
         ppresults.api_detection_results = detections_df
         ppresults.api_other_fields = other_fields        
@@ -1026,11 +1024,11 @@ def process_batch_results(options):
         job_name_string = options.job_name_string
     else:
         # This is rare; it only happens during debugging when the caller
-        # is supplying already-loaded API results.
-        if options.api_output_file is None:
+        # is supplying already-loaded MD results.
+        if options.md_results_file is None:
             job_name_string = 'unknown'
         else:
-            job_name_string = os.path.basename(options.api_output_file)
+            job_name_string = os.path.basename(options.md_results_file)
     
     if options.model_version_string is not None:
         model_version_string = options.model_version_string
@@ -1800,13 +1798,13 @@ if False:
     options = PostProcessingOptions()
     options.image_base_dir = base_dir
     options.output_dir = os.path.join(base_dir, 'preview')
-    options.api_output_file = os.path.join(base_dir, 'results.json')
+    options.md_results_file = os.path.join(base_dir, 'results.json')
     options.confidence_threshold = {'person':0.5,'animal':0.5,'vehicle':0.01}
     options.include_almost_detections = True
     options.almost_detection_confidence_threshold = 0.001
 
     ppresults = process_batch_results(options)
-    # from md_utils.path_utils import open_file; open_file(ppresults.output_html_file)
+    # from megadetector.utils.path_utils import open_file; open_file(ppresults.output_html_file)
 
 
 #%% Command-line driver
@@ -1817,8 +1815,8 @@ def main():
 
     parser = argparse.ArgumentParser()
     parser.add_argument(
-        'api_output_file',
-        help='path to .json file produced by the batch inference API')
+        'md_results_file',
+        help='path to .json file containing MegaDetector results')
     parser.add_argument(
         'output_dir',
         help='base directory for output')

{api/batch_processing → megadetector}/postprocessing/remap_detection_categories.py

@@ -16,7 +16,7 @@ import os
 
 from tqdm import tqdm
 
-from md_utils.ct_utils import invert_dictionary
+from megadetector.utils.ct_utils import invert_dictionary
 
 
 #%% Main function

{api/batch_processing → megadetector}/postprocessing/render_detection_confusion_matrix.py

@@ -20,12 +20,11 @@ from tqdm import tqdm
 from collections import defaultdict
 from functools import partial
 
-from md_utils.path_utils import find_images
-from md_utils.path_utils import flatten_path
-from md_visualization import visualization_utils as vis_utils
-from md_utils.write_html_image_list import write_html_image_list
-
-import md_visualization.plot_utils as plot_utils
+from megadetector.utils.path_utils import find_images
+from megadetector.utils.path_utils import flatten_path
+from megadetector.utils.write_html_image_list import write_html_image_list
+from megadetector.visualization import visualization_utils as vis_utils
+from megadetector.visualization import plot_utils
 
 from multiprocessing.pool import ThreadPool
 from multiprocessing.pool import Pool

{api/batch_processing → megadetector}/postprocessing/repeat_detection_elimination/find_repeat_detections.py

@@ -4,7 +4,7 @@ find_repeat_detections.py
 
 If you want to use this script, we recommend that you read the RDE user's guide:
 
-https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing/postprocessing/repeat_detection_elimination
+https://github.com/agentmorris/MegaDetector/tree/main/megadetector/postprocessing/repeat_detection_elimination
 
 Really, don't try to run this script without reading the user's guide, you'll think 
 it's more magical than it is. 
@@ -28,8 +28,8 @@ import argparse
 import os
 import sys
 
-from md_utils import ct_utils
-from api.batch_processing.postprocessing.repeat_detection_elimination import repeat_detections_core
+from megadetector.utils import ct_utils
+from megadetector.postprocessing.repeat_detection_elimination import repeat_detections_core
 
 
 #%% Interactive driver

{api/batch_processing → megadetector}/postprocessing/repeat_detection_elimination/remove_repeat_detections.py

@@ -7,7 +7,7 @@ to create a final filtered output file.
 
 If you want to use this script, we recommend that you read the RDE user's guide:
 
-https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing/postprocessing/repeat_detection_elimination
+https://github.com/agentmorris/MegaDetector/tree/main/megadetector/postprocessing/repeat_detection_elimination
 
 """
 
@@ -15,7 +15,8 @@ https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing/pos
 
 import argparse
 import os
-from api.batch_processing.postprocessing.repeat_detection_elimination import repeat_detections_core
+
+from megadetector.postprocessing.repeat_detection_elimination import repeat_detections_core
 
 
 #%% Main function

{api/batch_processing → megadetector}/postprocessing/repeat_detection_elimination/repeat_detections_core.py

@@ -7,7 +7,7 @@ Core utilities shared by find_repeat_detections and remove_repeat_detections.
 Nothing in this file (in fact nothing in this subpackage) will make sense until you read
 the RDE user's guide:
     
-https://github.com/agentmorris/MegaDetector/tree/master/api/batch_processing/postprocessing/repeat_detection_elimination
+https://github.com/agentmorris/MegaDetector/tree/main/megadetector/postprocessing/repeat_detection_elimination
 
 """
 
@@ -35,16 +35,16 @@ from multiprocessing.pool import ThreadPool
 from multiprocessing.pool import Pool
 from functools import partial
 
-from md_utils import path_utils
-from md_utils import ct_utils
-from api.batch_processing.postprocessing.load_api_results import load_api_results, write_api_results
-from api.batch_processing.postprocessing.postprocess_batch_results import is_sas_url
-from api.batch_processing.postprocessing.postprocess_batch_results import relative_sas_url
-from md_visualization.visualization_utils import open_image, render_detection_bounding_boxes
-from md_visualization import render_images_with_thumbnails
-from md_visualization import visualization_utils as vis_utils
-from md_utils.path_utils import flatten_path
-from md_utils.ct_utils import invert_dictionary
+from megadetector.utils import path_utils
+from megadetector.utils import ct_utils
+from megadetector.postprocessing.load_api_results import load_api_results, write_api_results
+from megadetector.postprocessing.postprocess_batch_results import is_sas_url
+from megadetector.postprocessing.postprocess_batch_results import relative_sas_url
+from megadetector.visualization.visualization_utils import open_image, render_detection_bounding_boxes
+from megadetector.visualization import render_images_with_thumbnails
+from megadetector.visualization import visualization_utils as vis_utils
+from megadetector.utils.path_utils import flatten_path
+from megadetector.utils.ct_utils import invert_dictionary
 
 # "PIL cannot read EXIF metainfo for the images"
 warnings.filterwarnings('ignore', '(Possibly )?corrupt EXIF data', UserWarning)

{api/batch_processing → megadetector}/postprocessing/separate_detections_into_folders.py

@@ -85,10 +85,9 @@ from multiprocessing.pool import ThreadPool
 from functools import partial
 from tqdm import tqdm
 
-from md_utils.ct_utils import args_to_object, is_float
-from detection.run_detector import get_typical_confidence_threshold_from_results
-
-import md_visualization.visualization_utils as vis_utils
+from megadetector.utils.ct_utils import args_to_object, is_float
+from megadetector.detection.run_detector import get_typical_confidence_threshold_from_results
+from megadetector.visualization import visualization_utils as vis_utils
 
 friendly_folder_names = {'animal':'animals','person':'people','vehicle':'vehicles'}
 

{api/batch_processing → megadetector}/postprocessing/subset_json_detector_output.py

@@ -62,8 +62,8 @@ import re
 
 from tqdm import tqdm
 
-from md_utils.ct_utils import args_to_object, get_max_conf, invert_dictionary
-from md_utils.path_utils import top_level_folder
+from megadetector.utils.ct_utils import args_to_object, get_max_conf, invert_dictionary
+from megadetector.utils.path_utils import top_level_folder
 
 
 #%% Helper classes

{api/batch_processing → megadetector}/postprocessing/top_folders_to_bottom.py

@@ -35,7 +35,7 @@ from tqdm import tqdm
 from functools import partial
 from multiprocessing.pool import ThreadPool
 
-from md_utils.path_utils import path_is_abs
+from megadetector.utils.path_utils import path_is_abs
 
 
 #%% Classes

{taxonomy_mapping → megadetector/taxonomy_mapping}/map_lila_taxonomy_to_wi_taxonomy.py

@@ -15,8 +15,8 @@ import os
 
 from tqdm import tqdm
 
-from data_management.lila.lila_common import read_lila_taxonomy_mapping, \
-    read_wildlife_insights_taxonomy_mapping
+from megadetector.data_management.lila.lila_common import \
+    read_lila_taxonomy_mapping, read_wildlife_insights_taxonomy_mapping
 
 
 #%% Prevent execution during infrastructural imports

{taxonomy_mapping → megadetector/taxonomy_mapping}/map_new_lila_datasets.py

@@ -24,12 +24,8 @@ datasets_to_map = [
 
 #%% Initialize taxonomic lookup
 
-from taxonomy_mapping.species_lookup import (
-    initialize_taxonomy_lookup,
-    get_preferred_taxonomic_match)
-
-# from taxonomy_mapping.species_lookup import (
-#    get_taxonomic_info, print_taxonomy_matche)
+from megadetector.taxonomy_mapping.species_lookup import \
+    initialize_taxonomy_lookup, get_preferred_taxonomic_match
 
 initialize_taxonomy_lookup(force_init=False)
 

{taxonomy_mapping → megadetector/taxonomy_mapping}/preview_lila_taxonomy.py

@@ -63,9 +63,8 @@ df = pd.read_csv(lila_taxonomy_file)
 
 #%% Prepare taxonomy lookup
 
-from taxonomy_mapping.species_lookup import (
-    initialize_taxonomy_lookup,
-    get_preferred_taxonomic_match)
+from megadetector.taxonomy_mapping.species_lookup import \
+    initialize_taxonomy_lookup, get_preferred_taxonomic_match
 
 # from taxonomy_mapping.species_lookup import (
 #    get_taxonomic_info, print_taxonomy_matche)
@@ -390,7 +389,7 @@ remapped_queries = {'papio':'papio+baboon',
                     'mirafra':'genus+mirafra'}
 
 import os
-from taxonomy_mapping import retrieve_sample_image
+from megadetector.taxonomy_mapping import retrieve_sample_image
 
 scientific_name_to_paths = {}
 image_base = os.path.join(preview_base,'images')
@@ -442,7 +441,7 @@ for i_row,row in df.iterrows():
 
 #%% Rename .jpeg to .jpg
 
-from md_utils import path_utils
+from megadetector.utils import path_utils
 all_images = path_utils.recursive_file_list(image_base,False)
 
 for fn in tqdm(all_images):
@@ -506,7 +505,7 @@ for images in scientific_name_to_preferred_images.values():
 print('Using a total of {} images'.format(len(used_images)))
 used_images_set = set(used_images)
 
-from md_utils import path_utils
+from megadetector.utils import path_utils
 all_images = path_utils.recursive_file_list(image_base,False)
 
 unused_images = []
@@ -587,5 +586,5 @@ with open(html_output_file, 'w', encoding='utf-8') as f:
 
 #%% Open HTML preview
 
-from md_utils.path_utils import open_file
+from megadetector.utils.path_utils import open_file
 open_file(html_output_file)

{taxonomy_mapping → megadetector/taxonomy_mapping}/retrieve_sample_image.py

@@ -22,7 +22,7 @@ method = 'simple_image_download' # 'google_images_download'
 
 if method == 'simple_image_download':
     
-    from taxonomy_mapping import simple_image_download
+    from megadetector.taxonomy_mapping import simple_image_download
     google_image_downloader = simple_image_download.Downloader()
     google_image_downloader.directory = output_folder
  

{taxonomy_mapping → megadetector/taxonomy_mapping}/simple_image_download.py

@@ -16,9 +16,10 @@ import os
 import urllib
 import requests
 import magic
-from urllib.parse import quote
 import random
 
+from urllib.parse import quote
+
 
 #%% Constants
 

{taxonomy_mapping → megadetector/taxonomy_mapping}/species_lookup.py

@@ -26,7 +26,7 @@ from typing import Any, Dict, List, Mapping, Sequence, Set
 import pandas as pd
 import numpy as np
 
-from md_utils import url_utils
+from megadetector.utils import url_utils
 
 taxonomy_download_dir = os.path.expanduser('~/taxonomy')
 

{taxonomy_mapping → megadetector/taxonomy_mapping}/taxonomy_csv_checker.py

@@ -27,7 +27,7 @@ import pandas as pd
 
 from typing import Optional
 
-from taxonomy_mapping.taxonomy_graph import TaxonNode, dag_to_tree
+from megadetector.taxonomy_mapping.taxonomy_graph import TaxonNode, dag_to_tree
 
 
 #%% Taxonomy checking

{taxonomy_mapping → megadetector/taxonomy_mapping}/validate_lila_category_mappings.py

@@ -11,7 +11,7 @@ Confirm that all category names on LILA have mappings in the taxonomy file.
 import json
 import os
 
-from data_management.lila.lila_common import read_lila_taxonomy_mapping
+from megadetector.data_management.lila.lila_common import read_lila_taxonomy_mapping
 
 
 #%% Prevent execution during infrastructural imports