mat3ra-esse 2024.12.19.post0__py3-none-any.whl → 2025.1.27.post0__py3-none-any.whl
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- mat3ra/esse/data/examples.py +1 -1
- mat3ra/esse/data/properties.py +2 -2
- mat3ra/esse/data/schemas.py +1 -1
- mat3ra/esse/models/core/reference/__init__.py +1 -1
- mat3ra/esse/models/core/reference/modeling/__init__.py +1 -1
- mat3ra/esse/models/core/reference/modeling/exabyte.py +1 -1
- mat3ra/esse/models/element.py +4 -4
- mat3ra/esse/models/in_memory_entity/base.py +1 -34
- mat3ra/esse/models/in_memory_entity/defaultable.py +1 -34
- mat3ra/esse/models/in_memory_entity/has_consistency_check_has_metadata_named_defaultable.py +61 -0
- mat3ra/esse/models/in_memory_entity/named.py +1 -34
- mat3ra/esse/models/in_memory_entity/named_defaultable.py +1 -34
- mat3ra/esse/models/in_memory_entity/named_defaultable_has_metadata.py +1 -34
- mat3ra/esse/models/in_memory_entity/named_defaultable_runtime_items.py +0 -33
- mat3ra/esse/models/job/__init__.py +3 -617
- mat3ra/esse/models/job/base.py +1 -33
- mat3ra/esse/models/material/__init__.py +14 -14
- mat3ra/esse/models/material/consistency_check.py +40 -0
- mat3ra/esse/models/project.py +0 -33
- mat3ra/esse/models/properties_directory/derived_properties.py +6 -6
- mat3ra/esse/models/properties_directory/non_scalar/total_energy_contributions.py +26 -26
- mat3ra/esse/models/properties_directory/structural/molecular_pattern.py +4 -4
- mat3ra/esse/models/property/base/__init__.py +0 -32
- mat3ra/esse/models/property/meta/__init__.py +0 -32
- mat3ra/esse/models/property/raw/__init__.py +0 -32
- mat3ra/esse/models/software/application.py +1 -34
- mat3ra/esse/models/software/executable.py +0 -33
- mat3ra/esse/models/software/flavor.py +0 -33
- mat3ra/esse/models/software/template.py +0 -33
- mat3ra/esse/models/software_directory/ml/unit/execution/__init__.py +3 -488
- mat3ra/esse/models/software_directory/ml/unit/execution/evaluate/cross_validate.py +0 -92
- mat3ra/esse/models/software_directory/ml/unit/execution/initialize.py +0 -92
- mat3ra/esse/models/software_directory/ml/unit/execution/score.py +0 -92
- mat3ra/esse/models/software_directory/ml/unit/execution/train.py +0 -92
- mat3ra/esse/models/software_directory/ml/unit/processing/__init__.py +0 -52
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/__init__.py +0 -32
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/manipulation.py +0 -32
- mat3ra/esse/models/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py +0 -32
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/__init__.py +0 -32
- mat3ra/esse/models/software_directory/ml/unit/processing/feature_selection/filter_based.py +0 -32
- mat3ra/esse/models/software_directory/modeling/deepmd.py +1 -33
- mat3ra/esse/models/software_directory/modeling/nwchem.py +1 -33
- mat3ra/esse/models/software_directory/modeling/unit/execution.py +0 -92
- mat3ra/esse/models/software_directory/modeling/vasp.py +1 -33
- mat3ra/esse/models/software_directory/scripting/jupyter_lab.py +1 -33
- mat3ra/esse/models/software_directory/scripting/python.py +0 -32
- mat3ra/esse/models/software_directory/scripting/shell.py +1 -33
- mat3ra/esse/models/software_directory/scripting/unit/execution.py +0 -92
- mat3ra/esse/models/system/_material.py +1 -1
- mat3ra/esse/models/system/_parent_job.py +1 -1
- mat3ra/esse/models/system/_project.py +1 -1
- mat3ra/esse/models/system/consistency_check.py +1 -7
- mat3ra/esse/models/system/creator.py +1 -1
- mat3ra/esse/models/system/creator_account.py +1 -1
- mat3ra/esse/models/system/description.py +1 -1
- mat3ra/esse/models/system/entity_reference.py +1 -1
- mat3ra/esse/models/system/has_consistency_check.py +39 -0
- mat3ra/esse/models/system/in_set.py +1 -1
- mat3ra/esse/models/system/job_extended.py +1 -1
- mat3ra/esse/models/system/owner.py +1 -1
- mat3ra/esse/models/workflow/__init__.py +2 -596
- mat3ra/esse/models/workflow/base.py +0 -33
- mat3ra/esse/models/workflow/subworkflow/__init__.py +1 -284
- mat3ra/esse/models/workflow/subworkflow/unit.py +0 -212
- mat3ra/esse/models/workflow/unit/__init__.py +0 -252
- mat3ra/esse/models/workflow/unit/assertion.py +0 -32
- mat3ra/esse/models/workflow/unit/assignment.py +0 -32
- mat3ra/esse/models/workflow/unit/base.py +0 -32
- mat3ra/esse/models/workflow/unit/condition.py +0 -32
- mat3ra/esse/models/workflow/unit/execution.py +0 -92
- mat3ra/esse/models/workflow/unit/io/__init__.py +0 -32
- mat3ra/esse/models/workflow/unit/map.py +0 -32
- mat3ra/esse/models/workflow/unit/processing.py +0 -32
- mat3ra/esse/models/workflow/unit/reduce.py +0 -32
- mat3ra/esse/models/workflow/unit/subworkflow.py +0 -32
- {mat3ra_esse-2024.12.19.post0.dist-info → mat3ra_esse-2025.1.27.post0.dist-info}/METADATA +9 -9
- {mat3ra_esse-2024.12.19.post0.dist-info → mat3ra_esse-2025.1.27.post0.dist-info}/RECORD +80 -77
- {mat3ra_esse-2024.12.19.post0.dist-info → mat3ra_esse-2025.1.27.post0.dist-info}/WHEEL +1 -1
- {mat3ra_esse-2024.12.19.post0.dist-info → mat3ra_esse-2025.1.27.post0.dist-info}/LICENSE.md +0 -0
- {mat3ra_esse-2024.12.19.post0.dist-info → mat3ra_esse-2025.1.27.post0.dist-info}/top_level.txt +0 -0
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-
name: Name
|
|
850
|
-
"""
|
|
851
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
852
|
-
"""
|
|
853
|
-
severity: Severity
|
|
854
|
-
"""
|
|
855
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
856
|
-
"""
|
|
857
|
-
message: str
|
|
858
|
-
"""
|
|
859
|
-
Message generated by the consistency check describing the problem.
|
|
860
|
-
"""
|
|
861
|
-
|
|
862
|
-
|
|
863
692
|
class ExecutionUnitSchemaBase(BaseModel):
|
|
864
693
|
model_config = ConfigDict(
|
|
865
694
|
extra="allow",
|
|
@@ -910,7 +739,6 @@ class ExecutionUnitSchemaBase(BaseModel):
|
|
|
910
739
|
entity slug
|
|
911
740
|
"""
|
|
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|
systemName: Optional[str] = None
|
|
913
|
-
consistencyChecks: Optional[List[ConsistencyCheck61]] = None
|
|
914
742
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
915
743
|
"""
|
|
916
744
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -946,25 +774,6 @@ class Type39(Enum):
|
|
|
946
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|
assignment = "assignment"
|
|
947
775
|
|
|
948
776
|
|
|
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|
-
class ConsistencyCheck62(BaseModel):
|
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|
-
key: str
|
|
951
|
-
"""
|
|
952
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
953
|
-
"""
|
|
954
|
-
name: Name
|
|
955
|
-
"""
|
|
956
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
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|
-
"""
|
|
958
|
-
severity: Severity
|
|
959
|
-
"""
|
|
960
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
961
|
-
"""
|
|
962
|
-
message: str
|
|
963
|
-
"""
|
|
964
|
-
Message generated by the consistency check describing the problem.
|
|
965
|
-
"""
|
|
966
|
-
|
|
967
|
-
|
|
968
777
|
class AssignmentUnitSchema(BaseModel):
|
|
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778
|
model_config = ConfigDict(
|
|
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|
extra="allow",
|
|
@@ -1020,7 +829,6 @@ class AssignmentUnitSchema(BaseModel):
|
|
|
1020
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|
entity slug
|
|
1021
830
|
"""
|
|
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|
systemName: Optional[str] = None
|
|
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|
-
consistencyChecks: Optional[List[ConsistencyCheck62]] = None
|
|
1024
832
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1025
833
|
"""
|
|
1026
834
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1057,25 +865,6 @@ class Type40(Enum):
|
|
|
1057
865
|
processing = "processing"
|
|
1058
866
|
|
|
1059
867
|
|
|
1060
|
-
class ConsistencyCheck63(BaseModel):
|
|
1061
|
-
key: str
|
|
1062
|
-
"""
|
|
1063
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1064
|
-
"""
|
|
1065
|
-
name: Name
|
|
1066
|
-
"""
|
|
1067
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1068
|
-
"""
|
|
1069
|
-
severity: Severity
|
|
1070
|
-
"""
|
|
1071
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1072
|
-
"""
|
|
1073
|
-
message: str
|
|
1074
|
-
"""
|
|
1075
|
-
Message generated by the consistency check describing the problem.
|
|
1076
|
-
"""
|
|
1077
|
-
|
|
1078
|
-
|
|
1079
868
|
class ProcessingUnitSchema(BaseModel):
|
|
1080
869
|
model_config = ConfigDict(
|
|
1081
870
|
extra="allow",
|
|
@@ -1131,7 +920,6 @@ class ProcessingUnitSchema(BaseModel):
|
|
|
1131
920
|
entity slug
|
|
1132
921
|
"""
|
|
1133
922
|
systemName: Optional[str] = None
|
|
1134
|
-
consistencyChecks: Optional[List[ConsistencyCheck63]] = None
|
|
1135
923
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1136
924
|
"""
|
|
1137
925
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1221,77 +1009,6 @@ class BaseModelModel(BaseModel):
|
|
|
1221
1009
|
method: BaseMethod = Field(..., title="base method")
|
|
1222
1010
|
|
|
1223
1011
|
|
|
1224
|
-
class ConsistencyCheck64(BaseModel):
|
|
1225
|
-
key: str
|
|
1226
|
-
"""
|
|
1227
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1228
|
-
"""
|
|
1229
|
-
name: Name
|
|
1230
|
-
"""
|
|
1231
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1232
|
-
"""
|
|
1233
|
-
severity: Severity
|
|
1234
|
-
"""
|
|
1235
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1236
|
-
"""
|
|
1237
|
-
message: str
|
|
1238
|
-
"""
|
|
1239
|
-
Message generated by the consistency check describing the problem.
|
|
1240
|
-
"""
|
|
1241
|
-
|
|
1242
|
-
|
|
1243
|
-
class ApplicationSchemaBase11(BaseModel):
|
|
1244
|
-
model_config = ConfigDict(
|
|
1245
|
-
extra="allow",
|
|
1246
|
-
)
|
|
1247
|
-
shortName: Optional[str] = None
|
|
1248
|
-
"""
|
|
1249
|
-
The short name of the application. e.g. qe
|
|
1250
|
-
"""
|
|
1251
|
-
summary: Optional[str] = None
|
|
1252
|
-
"""
|
|
1253
|
-
Application's short description.
|
|
1254
|
-
"""
|
|
1255
|
-
version: Optional[str] = None
|
|
1256
|
-
"""
|
|
1257
|
-
Application version. e.g. 5.3.5
|
|
1258
|
-
"""
|
|
1259
|
-
build: Optional[str] = None
|
|
1260
|
-
"""
|
|
1261
|
-
Application build. e.g. VTST
|
|
1262
|
-
"""
|
|
1263
|
-
hasAdvancedComputeOptions: Optional[bool] = None
|
|
1264
|
-
"""
|
|
1265
|
-
Whether advanced compute options are present
|
|
1266
|
-
"""
|
|
1267
|
-
isLicensed: Optional[bool] = None
|
|
1268
|
-
"""
|
|
1269
|
-
Whether licensing is present
|
|
1270
|
-
"""
|
|
1271
|
-
field_id: Optional[str] = Field(None, alias="_id")
|
|
1272
|
-
"""
|
|
1273
|
-
entity identity
|
|
1274
|
-
"""
|
|
1275
|
-
slug: Optional[str] = None
|
|
1276
|
-
"""
|
|
1277
|
-
entity slug
|
|
1278
|
-
"""
|
|
1279
|
-
systemName: Optional[str] = None
|
|
1280
|
-
consistencyChecks: Optional[List[ConsistencyCheck64]] = None
|
|
1281
|
-
schemaVersion: Optional[str] = "2022.8.16"
|
|
1282
|
-
"""
|
|
1283
|
-
entity's schema version. Used to distinct between different schemas.
|
|
1284
|
-
"""
|
|
1285
|
-
name: Optional[str] = None
|
|
1286
|
-
"""
|
|
1287
|
-
entity name
|
|
1288
|
-
"""
|
|
1289
|
-
isDefault: Optional[bool] = False
|
|
1290
|
-
"""
|
|
1291
|
-
Identifies that entity is defaultable
|
|
1292
|
-
"""
|
|
1293
|
-
|
|
1294
|
-
|
|
1295
1012
|
class Queue(Enum):
|
|
1296
1013
|
D = "D"
|
|
1297
1014
|
OR = "OR"
|
|
@@ -1449,7 +1166,7 @@ class Subworkflow(BaseModel):
|
|
|
1449
1166
|
Contains the Units of the subworkflow
|
|
1450
1167
|
"""
|
|
1451
1168
|
model: BaseModelModel = Field(..., title="base model")
|
|
1452
|
-
application:
|
|
1169
|
+
application: ApplicationSchemaBase = Field(..., title="application schema (base)")
|
|
1453
1170
|
isDraft: Optional[bool] = False
|
|
1454
1171
|
"""
|
|
1455
1172
|
Defines whether to store the results/properties extracted in this unit to properties collection
|
|
@@ -1523,25 +1240,6 @@ class ObjectStorageIoSchema2(BaseModel):
|
|
|
1523
1240
|
"""
|
|
1524
1241
|
|
|
1525
1242
|
|
|
1526
|
-
class ConsistencyCheck65(BaseModel):
|
|
1527
|
-
key: str
|
|
1528
|
-
"""
|
|
1529
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1530
|
-
"""
|
|
1531
|
-
name: Name
|
|
1532
|
-
"""
|
|
1533
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1534
|
-
"""
|
|
1535
|
-
severity: Severity
|
|
1536
|
-
"""
|
|
1537
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1538
|
-
"""
|
|
1539
|
-
message: str
|
|
1540
|
-
"""
|
|
1541
|
-
Message generated by the consistency check describing the problem.
|
|
1542
|
-
"""
|
|
1543
|
-
|
|
1544
|
-
|
|
1545
1243
|
class DataIOUnitSchema2(BaseModel):
|
|
1546
1244
|
model_config = ConfigDict(
|
|
1547
1245
|
extra="allow",
|
|
@@ -1594,7 +1292,6 @@ class DataIOUnitSchema2(BaseModel):
|
|
|
1594
1292
|
entity slug
|
|
1595
1293
|
"""
|
|
1596
1294
|
systemName: Optional[str] = None
|
|
1597
|
-
consistencyChecks: Optional[List[ConsistencyCheck65]] = None
|
|
1598
1295
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1599
1296
|
"""
|
|
1600
1297
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1630,25 +1327,6 @@ class Type42(Enum):
|
|
|
1630
1327
|
reduce = "reduce"
|
|
1631
1328
|
|
|
1632
1329
|
|
|
1633
|
-
class ConsistencyCheck66(BaseModel):
|
|
1634
|
-
key: str
|
|
1635
|
-
"""
|
|
1636
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1637
|
-
"""
|
|
1638
|
-
name: Name
|
|
1639
|
-
"""
|
|
1640
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1641
|
-
"""
|
|
1642
|
-
severity: Severity
|
|
1643
|
-
"""
|
|
1644
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1645
|
-
"""
|
|
1646
|
-
message: str
|
|
1647
|
-
"""
|
|
1648
|
-
Message generated by the consistency check describing the problem.
|
|
1649
|
-
"""
|
|
1650
|
-
|
|
1651
|
-
|
|
1652
1330
|
class ReduceUnitSchema1(BaseModel):
|
|
1653
1331
|
model_config = ConfigDict(
|
|
1654
1332
|
extra="allow",
|
|
@@ -1700,7 +1378,6 @@ class ReduceUnitSchema1(BaseModel):
|
|
|
1700
1378
|
entity slug
|
|
1701
1379
|
"""
|
|
1702
1380
|
systemName: Optional[str] = None
|
|
1703
|
-
consistencyChecks: Optional[List[ConsistencyCheck66]] = None
|
|
1704
1381
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1705
1382
|
"""
|
|
1706
1383
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1736,25 +1413,6 @@ class Type43(Enum):
|
|
|
1736
1413
|
condition = "condition"
|
|
1737
1414
|
|
|
1738
1415
|
|
|
1739
|
-
class ConsistencyCheck67(BaseModel):
|
|
1740
|
-
key: str
|
|
1741
|
-
"""
|
|
1742
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1743
|
-
"""
|
|
1744
|
-
name: Name
|
|
1745
|
-
"""
|
|
1746
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1747
|
-
"""
|
|
1748
|
-
severity: Severity
|
|
1749
|
-
"""
|
|
1750
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1751
|
-
"""
|
|
1752
|
-
message: str
|
|
1753
|
-
"""
|
|
1754
|
-
Message generated by the consistency check describing the problem.
|
|
1755
|
-
"""
|
|
1756
|
-
|
|
1757
|
-
|
|
1758
1416
|
class ConditionUnitSchema2(BaseModel):
|
|
1759
1417
|
model_config = ConfigDict(
|
|
1760
1418
|
extra="allow",
|
|
@@ -1822,7 +1480,6 @@ class ConditionUnitSchema2(BaseModel):
|
|
|
1822
1480
|
entity slug
|
|
1823
1481
|
"""
|
|
1824
1482
|
systemName: Optional[str] = None
|
|
1825
|
-
consistencyChecks: Optional[List[ConsistencyCheck67]] = None
|
|
1826
1483
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1827
1484
|
"""
|
|
1828
1485
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1858,25 +1515,6 @@ class Type44(Enum):
|
|
|
1858
1515
|
assertion = "assertion"
|
|
1859
1516
|
|
|
1860
1517
|
|
|
1861
|
-
class ConsistencyCheck68(BaseModel):
|
|
1862
|
-
key: str
|
|
1863
|
-
"""
|
|
1864
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1865
|
-
"""
|
|
1866
|
-
name: Name
|
|
1867
|
-
"""
|
|
1868
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1869
|
-
"""
|
|
1870
|
-
severity: Severity
|
|
1871
|
-
"""
|
|
1872
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1873
|
-
"""
|
|
1874
|
-
message: str
|
|
1875
|
-
"""
|
|
1876
|
-
Message generated by the consistency check describing the problem.
|
|
1877
|
-
"""
|
|
1878
|
-
|
|
1879
|
-
|
|
1880
1518
|
class AssertionUnitSchema2(BaseModel):
|
|
1881
1519
|
model_config = ConfigDict(
|
|
1882
1520
|
extra="allow",
|
|
@@ -1928,7 +1566,6 @@ class AssertionUnitSchema2(BaseModel):
|
|
|
1928
1566
|
entity slug
|
|
1929
1567
|
"""
|
|
1930
1568
|
systemName: Optional[str] = None
|
|
1931
|
-
consistencyChecks: Optional[List[ConsistencyCheck68]] = None
|
|
1932
1569
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
1933
1570
|
"""
|
|
1934
1571
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -1964,96 +1601,6 @@ class Type45(Enum):
|
|
|
1964
1601
|
execution = "execution"
|
|
1965
1602
|
|
|
1966
1603
|
|
|
1967
|
-
class ConsistencyCheck69(BaseModel):
|
|
1968
|
-
key: str
|
|
1969
|
-
"""
|
|
1970
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
1971
|
-
"""
|
|
1972
|
-
name: Name
|
|
1973
|
-
"""
|
|
1974
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
1975
|
-
"""
|
|
1976
|
-
severity: Severity
|
|
1977
|
-
"""
|
|
1978
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
1979
|
-
"""
|
|
1980
|
-
message: str
|
|
1981
|
-
"""
|
|
1982
|
-
Message generated by the consistency check describing the problem.
|
|
1983
|
-
"""
|
|
1984
|
-
|
|
1985
|
-
|
|
1986
|
-
class ApplicationSchemaBase12(BaseModel):
|
|
1987
|
-
model_config = ConfigDict(
|
|
1988
|
-
extra="allow",
|
|
1989
|
-
)
|
|
1990
|
-
shortName: Optional[str] = None
|
|
1991
|
-
"""
|
|
1992
|
-
The short name of the application. e.g. qe
|
|
1993
|
-
"""
|
|
1994
|
-
summary: Optional[str] = None
|
|
1995
|
-
"""
|
|
1996
|
-
Application's short description.
|
|
1997
|
-
"""
|
|
1998
|
-
version: Optional[str] = None
|
|
1999
|
-
"""
|
|
2000
|
-
Application version. e.g. 5.3.5
|
|
2001
|
-
"""
|
|
2002
|
-
build: Optional[str] = None
|
|
2003
|
-
"""
|
|
2004
|
-
Application build. e.g. VTST
|
|
2005
|
-
"""
|
|
2006
|
-
hasAdvancedComputeOptions: Optional[bool] = None
|
|
2007
|
-
"""
|
|
2008
|
-
Whether advanced compute options are present
|
|
2009
|
-
"""
|
|
2010
|
-
isLicensed: Optional[bool] = None
|
|
2011
|
-
"""
|
|
2012
|
-
Whether licensing is present
|
|
2013
|
-
"""
|
|
2014
|
-
field_id: Optional[str] = Field(None, alias="_id")
|
|
2015
|
-
"""
|
|
2016
|
-
entity identity
|
|
2017
|
-
"""
|
|
2018
|
-
slug: Optional[str] = None
|
|
2019
|
-
"""
|
|
2020
|
-
entity slug
|
|
2021
|
-
"""
|
|
2022
|
-
systemName: Optional[str] = None
|
|
2023
|
-
consistencyChecks: Optional[List[ConsistencyCheck69]] = None
|
|
2024
|
-
schemaVersion: Optional[str] = "2022.8.16"
|
|
2025
|
-
"""
|
|
2026
|
-
entity's schema version. Used to distinct between different schemas.
|
|
2027
|
-
"""
|
|
2028
|
-
name: Optional[str] = None
|
|
2029
|
-
"""
|
|
2030
|
-
entity name
|
|
2031
|
-
"""
|
|
2032
|
-
isDefault: Optional[bool] = False
|
|
2033
|
-
"""
|
|
2034
|
-
Identifies that entity is defaultable
|
|
2035
|
-
"""
|
|
2036
|
-
|
|
2037
|
-
|
|
2038
|
-
class ConsistencyCheck70(BaseModel):
|
|
2039
|
-
key: str
|
|
2040
|
-
"""
|
|
2041
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2042
|
-
"""
|
|
2043
|
-
name: Name
|
|
2044
|
-
"""
|
|
2045
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2046
|
-
"""
|
|
2047
|
-
severity: Severity
|
|
2048
|
-
"""
|
|
2049
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2050
|
-
"""
|
|
2051
|
-
message: str
|
|
2052
|
-
"""
|
|
2053
|
-
Message generated by the consistency check describing the problem.
|
|
2054
|
-
"""
|
|
2055
|
-
|
|
2056
|
-
|
|
2057
1604
|
class ExecutableSchema11(BaseModel):
|
|
2058
1605
|
name: str
|
|
2059
1606
|
"""
|
|
@@ -2076,7 +1623,6 @@ class ExecutableSchema11(BaseModel):
|
|
|
2076
1623
|
entity slug
|
|
2077
1624
|
"""
|
|
2078
1625
|
systemName: Optional[str] = None
|
|
2079
|
-
consistencyChecks: Optional[List[ConsistencyCheck70]] = None
|
|
2080
1626
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2081
1627
|
"""
|
|
2082
1628
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2103,25 +1649,6 @@ class ExecutableSchema11(BaseModel):
|
|
|
2103
1649
|
"""
|
|
2104
1650
|
|
|
2105
1651
|
|
|
2106
|
-
class ConsistencyCheck71(BaseModel):
|
|
2107
|
-
key: str
|
|
2108
|
-
"""
|
|
2109
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2110
|
-
"""
|
|
2111
|
-
name: Name
|
|
2112
|
-
"""
|
|
2113
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2114
|
-
"""
|
|
2115
|
-
severity: Severity
|
|
2116
|
-
"""
|
|
2117
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2118
|
-
"""
|
|
2119
|
-
message: str
|
|
2120
|
-
"""
|
|
2121
|
-
Message generated by the consistency check describing the problem.
|
|
2122
|
-
"""
|
|
2123
|
-
|
|
2124
|
-
|
|
2125
1652
|
class FlavorSchema11(BaseModel):
|
|
2126
1653
|
executableId: Optional[str] = None
|
|
2127
1654
|
"""
|
|
@@ -2147,7 +1674,6 @@ class FlavorSchema11(BaseModel):
|
|
|
2147
1674
|
entity slug
|
|
2148
1675
|
"""
|
|
2149
1676
|
systemName: Optional[str] = None
|
|
2150
|
-
consistencyChecks: Optional[List[ConsistencyCheck71]] = None
|
|
2151
1677
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2152
1678
|
"""
|
|
2153
1679
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2178,25 +1704,6 @@ class FlavorSchema11(BaseModel):
|
|
|
2178
1704
|
"""
|
|
2179
1705
|
|
|
2180
1706
|
|
|
2181
|
-
class ConsistencyCheck72(BaseModel):
|
|
2182
|
-
key: str
|
|
2183
|
-
"""
|
|
2184
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2185
|
-
"""
|
|
2186
|
-
name: Name
|
|
2187
|
-
"""
|
|
2188
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2189
|
-
"""
|
|
2190
|
-
severity: Severity
|
|
2191
|
-
"""
|
|
2192
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2193
|
-
"""
|
|
2194
|
-
message: str
|
|
2195
|
-
"""
|
|
2196
|
-
Message generated by the consistency check describing the problem.
|
|
2197
|
-
"""
|
|
2198
|
-
|
|
2199
|
-
|
|
2200
1707
|
class ExecutionUnitSchemaBase2(BaseModel):
|
|
2201
1708
|
model_config = ConfigDict(
|
|
2202
1709
|
extra="allow",
|
|
@@ -2205,7 +1712,7 @@ class ExecutionUnitSchemaBase2(BaseModel):
|
|
|
2205
1712
|
"""
|
|
2206
1713
|
type of the unit
|
|
2207
1714
|
"""
|
|
2208
|
-
application:
|
|
1715
|
+
application: ApplicationSchemaBase = Field(..., title="application schema (base)")
|
|
2209
1716
|
executable: Optional[ExecutableSchema11] = Field(None, title="executable schema")
|
|
2210
1717
|
flavor: Optional[FlavorSchema11] = Field(None, title="flavor schema")
|
|
2211
1718
|
input: Any
|
|
@@ -2247,7 +1754,6 @@ class ExecutionUnitSchemaBase2(BaseModel):
|
|
|
2247
1754
|
entity slug
|
|
2248
1755
|
"""
|
|
2249
1756
|
systemName: Optional[str] = None
|
|
2250
|
-
consistencyChecks: Optional[List[ConsistencyCheck72]] = None
|
|
2251
1757
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2252
1758
|
"""
|
|
2253
1759
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2283,25 +1789,6 @@ class Type46(Enum):
|
|
|
2283
1789
|
assignment = "assignment"
|
|
2284
1790
|
|
|
2285
1791
|
|
|
2286
|
-
class ConsistencyCheck73(BaseModel):
|
|
2287
|
-
key: str
|
|
2288
|
-
"""
|
|
2289
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2290
|
-
"""
|
|
2291
|
-
name: Name
|
|
2292
|
-
"""
|
|
2293
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2294
|
-
"""
|
|
2295
|
-
severity: Severity
|
|
2296
|
-
"""
|
|
2297
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2298
|
-
"""
|
|
2299
|
-
message: str
|
|
2300
|
-
"""
|
|
2301
|
-
Message generated by the consistency check describing the problem.
|
|
2302
|
-
"""
|
|
2303
|
-
|
|
2304
|
-
|
|
2305
1792
|
class AssignmentUnitSchema2(BaseModel):
|
|
2306
1793
|
model_config = ConfigDict(
|
|
2307
1794
|
extra="allow",
|
|
@@ -2357,7 +1844,6 @@ class AssignmentUnitSchema2(BaseModel):
|
|
|
2357
1844
|
entity slug
|
|
2358
1845
|
"""
|
|
2359
1846
|
systemName: Optional[str] = None
|
|
2360
|
-
consistencyChecks: Optional[List[ConsistencyCheck73]] = None
|
|
2361
1847
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2362
1848
|
"""
|
|
2363
1849
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2394,25 +1880,6 @@ class Type47(Enum):
|
|
|
2394
1880
|
processing = "processing"
|
|
2395
1881
|
|
|
2396
1882
|
|
|
2397
|
-
class ConsistencyCheck74(BaseModel):
|
|
2398
|
-
key: str
|
|
2399
|
-
"""
|
|
2400
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2401
|
-
"""
|
|
2402
|
-
name: Name
|
|
2403
|
-
"""
|
|
2404
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2405
|
-
"""
|
|
2406
|
-
severity: Severity
|
|
2407
|
-
"""
|
|
2408
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2409
|
-
"""
|
|
2410
|
-
message: str
|
|
2411
|
-
"""
|
|
2412
|
-
Message generated by the consistency check describing the problem.
|
|
2413
|
-
"""
|
|
2414
|
-
|
|
2415
|
-
|
|
2416
1883
|
class ProcessingUnitSchema1(BaseModel):
|
|
2417
1884
|
model_config = ConfigDict(
|
|
2418
1885
|
extra="allow",
|
|
@@ -2468,7 +1935,6 @@ class ProcessingUnitSchema1(BaseModel):
|
|
|
2468
1935
|
entity slug
|
|
2469
1936
|
"""
|
|
2470
1937
|
systemName: Optional[str] = None
|
|
2471
|
-
consistencyChecks: Optional[List[ConsistencyCheck74]] = None
|
|
2472
1938
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2473
1939
|
"""
|
|
2474
1940
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2524,25 +1990,6 @@ class Input(BaseModel):
|
|
|
2524
1990
|
useValues: Optional[bool] = None
|
|
2525
1991
|
|
|
2526
1992
|
|
|
2527
|
-
class ConsistencyCheck75(BaseModel):
|
|
2528
|
-
key: str
|
|
2529
|
-
"""
|
|
2530
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2531
|
-
"""
|
|
2532
|
-
name: Name
|
|
2533
|
-
"""
|
|
2534
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2535
|
-
"""
|
|
2536
|
-
severity: Severity
|
|
2537
|
-
"""
|
|
2538
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2539
|
-
"""
|
|
2540
|
-
message: str
|
|
2541
|
-
"""
|
|
2542
|
-
Message generated by the consistency check describing the problem.
|
|
2543
|
-
"""
|
|
2544
|
-
|
|
2545
|
-
|
|
2546
1993
|
class MapUnitSchema(BaseModel):
|
|
2547
1994
|
model_config = ConfigDict(
|
|
2548
1995
|
extra="allow",
|
|
@@ -2594,7 +2041,6 @@ class MapUnitSchema(BaseModel):
|
|
|
2594
2041
|
entity slug
|
|
2595
2042
|
"""
|
|
2596
2043
|
systemName: Optional[str] = None
|
|
2597
|
-
consistencyChecks: Optional[List[ConsistencyCheck75]] = None
|
|
2598
2044
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2599
2045
|
"""
|
|
2600
2046
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2630,25 +2076,6 @@ class Type49(Enum):
|
|
|
2630
2076
|
subworkflow = "subworkflow"
|
|
2631
2077
|
|
|
2632
2078
|
|
|
2633
|
-
class ConsistencyCheck76(BaseModel):
|
|
2634
|
-
key: str
|
|
2635
|
-
"""
|
|
2636
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2637
|
-
"""
|
|
2638
|
-
name: Name
|
|
2639
|
-
"""
|
|
2640
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2641
|
-
"""
|
|
2642
|
-
severity: Severity
|
|
2643
|
-
"""
|
|
2644
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2645
|
-
"""
|
|
2646
|
-
message: str
|
|
2647
|
-
"""
|
|
2648
|
-
Message generated by the consistency check describing the problem.
|
|
2649
|
-
"""
|
|
2650
|
-
|
|
2651
|
-
|
|
2652
2079
|
class SubworkflowUnitSchema(BaseModel):
|
|
2653
2080
|
model_config = ConfigDict(
|
|
2654
2081
|
extra="allow",
|
|
@@ -2692,7 +2119,6 @@ class SubworkflowUnitSchema(BaseModel):
|
|
|
2692
2119
|
entity slug
|
|
2693
2120
|
"""
|
|
2694
2121
|
systemName: Optional[str] = None
|
|
2695
|
-
consistencyChecks: Optional[List[ConsistencyCheck76]] = None
|
|
2696
2122
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2697
2123
|
"""
|
|
2698
2124
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2752,25 +2178,6 @@ class WorkflowUnitSchema(
|
|
|
2752
2178
|
] = Field(..., discriminator="type", title="workflow unit schema")
|
|
2753
2179
|
|
|
2754
2180
|
|
|
2755
|
-
class ConsistencyCheck77(BaseModel):
|
|
2756
|
-
key: str
|
|
2757
|
-
"""
|
|
2758
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2759
|
-
"""
|
|
2760
|
-
name: Name
|
|
2761
|
-
"""
|
|
2762
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2763
|
-
"""
|
|
2764
|
-
severity: Severity
|
|
2765
|
-
"""
|
|
2766
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2767
|
-
"""
|
|
2768
|
-
message: str
|
|
2769
|
-
"""
|
|
2770
|
-
Message generated by the consistency check describing the problem.
|
|
2771
|
-
"""
|
|
2772
|
-
|
|
2773
|
-
|
|
2774
2181
|
class WorkflowSchema(BaseModel):
|
|
2775
2182
|
subworkflows: List[Subworkflow]
|
|
2776
2183
|
"""
|
|
@@ -2801,7 +2208,6 @@ class WorkflowSchema(BaseModel):
|
|
|
2801
2208
|
entity slug
|
|
2802
2209
|
"""
|
|
2803
2210
|
systemName: Optional[str] = None
|
|
2804
|
-
consistencyChecks: Optional[List[ConsistencyCheck77]] = None
|
|
2805
2211
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2806
2212
|
"""
|
|
2807
2213
|
entity's schema version. Used to distinct between different schemas.
|
|
@@ -2905,7 +2311,7 @@ class ComputeArgumentsSchema4(BaseModel):
|
|
|
2905
2311
|
|
|
2906
2312
|
|
|
2907
2313
|
class EntityReferenceSchema(BaseModel):
|
|
2908
|
-
field_id:
|
|
2314
|
+
field_id: str = Field(..., alias="_id")
|
|
2909
2315
|
"""
|
|
2910
2316
|
entity identity
|
|
2911
2317
|
"""
|
|
@@ -2929,25 +2335,6 @@ class ScopeTrackItem(BaseModel):
|
|
|
2929
2335
|
scope: Optional[WorkflowScopeSchema] = Field(None, title="workflow scope schema")
|
|
2930
2336
|
|
|
2931
2337
|
|
|
2932
|
-
class ConsistencyCheck78(BaseModel):
|
|
2933
|
-
key: str
|
|
2934
|
-
"""
|
|
2935
|
-
Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
|
|
2936
|
-
"""
|
|
2937
|
-
name: Name
|
|
2938
|
-
"""
|
|
2939
|
-
Name of the consistency check that is performed, which is listed in an enum.
|
|
2940
|
-
"""
|
|
2941
|
-
severity: Severity
|
|
2942
|
-
"""
|
|
2943
|
-
Severity level of the problem, which is used in UI to differentiate.
|
|
2944
|
-
"""
|
|
2945
|
-
message: str
|
|
2946
|
-
"""
|
|
2947
|
-
Message generated by the consistency check describing the problem.
|
|
2948
|
-
"""
|
|
2949
|
-
|
|
2950
|
-
|
|
2951
2338
|
class JobSchema(BaseModel):
|
|
2952
2339
|
workflow: WorkflowSchema = Field(..., title="workflow schema")
|
|
2953
2340
|
rmsId: Optional[str] = None
|
|
@@ -2990,7 +2377,6 @@ class JobSchema(BaseModel):
|
|
|
2990
2377
|
entity slug
|
|
2991
2378
|
"""
|
|
2992
2379
|
systemName: Optional[str] = None
|
|
2993
|
-
consistencyChecks: Optional[List[ConsistencyCheck78]] = None
|
|
2994
2380
|
schemaVersion: Optional[str] = "2022.8.16"
|
|
2995
2381
|
"""
|
|
2996
2382
|
entity's schema version. Used to distinct between different schemas.
|