lavavu-osmesa 1.9.9__cp313-cp313-manylinux_2_28_x86_64.whl

lavavu/html/drawbox.js

@@ -0,0 +1,1039 @@
+//Bounding box only in WebGL
+//Urgent TODO: move shared code with draw.js into common file
+//maintaining two copies currently!
+//Re-init using previous callback data
+
+function initBox(el, cmd_callback, fixedsize) {
+  //console.log("INITBOX: " + el.id);
+  var canvas = document.createElement("canvas");
+  canvas.classList.add("resized");
+  if (!el) el = document.body.firstChild;
+  canvas.id = "canvas_" + el.id;
+  canvas.imgtarget = el
+  el.parentElement.appendChild(canvas);
+  canvas.style.cssText = "position: absolute; width: 100%; height: 100%; margin: 0px; padding: 0px; top: 0; left: 0; bottom: 0; right: 0; z-index: 11; border: none;"
+  var viewer = new BoxViewer(canvas);
+
+  //Canvas event handling
+  canvas.mouse = new Mouse(canvas, new MouseEventHandler(canvasBoxMouseClick, canvasBoxMouseWheel, canvasBoxMouseMove, canvasBoxMouseDown, null, null, canvasBoxMousePinch));
+  //Following two settings should probably be defaults?
+  canvas.mouse.moveUpdate = true; //Continual update of deltaX/Y
+  //canvas.mouse.setDefault();
+  canvas.mouse.wheelTimer = true; //Accumulate wheel scroll (prevents too many events backing up)
+  defaultMouse = document.mouse = canvas.mouse;
+
+  //Attach viewer object to canvas
+  canvas.viewer = viewer;
+
+  //Disable context menu and prevent bubbling
+  canvas.addEventListener('contextmenu', e => {e.preventDefault(); e.stopPropagation();});
+
+  //Command callback function
+  viewer.command = cmd_callback;
+
+  //Data dict and colourmap names stored in globals
+  viewer.dict = window.dictionary;
+  viewer.defaultcolourmaps = window.defaultcolourmaps;
+
+  //Enable to forward key presses to server directly
+  //(only used for full size viewers)
+  if (fixedsize == 1)
+    document.addEventListener('keyup', function(event) {keyPress(event, viewer);});
+
+  return viewer;
+}
+
+function keyModifiers(event) {
+  modifiers = '';
+  if (event.ctrlKey) modifiers += 'C';
+  if (event.shiftKey) modifiers += 'S';
+  if (event.altKey) modifiers += 'A';
+  if (event.metaKey) modifiers += 'M';
+  return modifiers;
+}
+
+function keyPress(event, viewer) {
+  // space and arrow keys, prevent scrolling
+  if ([' ', 'ArrowUp', 'ArrowDown', 'ArrowLeft', 'ArrowRight'].includes(event.key))
+    event.preventDefault();
+
+  if (event.target.tagName == 'INPUT') return;
+
+  //Special key codes
+  if (event.key == 'ArrowUp') key = 17;
+  else if (event.key == 'ArrowDown') key = 18;
+  else if (event.key == 'ArrowLeft') key = 20;
+  else if (event.key == 'ArrowRight') key = 19;
+  else if (event.key == 'PageUp') key = 24;
+  else if (event.key == 'PageDown') key = 25;
+  else if (event.key == 'PageUp') key = 24;
+  else if (event.key == 'Home') key = 22;
+  else if (event.key == 'End') key = 23;
+  else if (event.key == 'Backspace') key = 8;
+  else if (event.key == 'Tab') key = 9;
+  else if (event.key == 'Escape') key = 27;
+  else if (event.key == 'Enter') key = 13;
+  else if (event.key == 'Insert') key = 21;
+  else if (event.key == 'Delete') key = 127;
+  else if (event.key[0] == 'F' && event.key.length > 1)
+    key = 189 + parseInt(event.key.substr(1));
+  else if (event.key.length == 1) {
+    key = event.key.charCodeAt(0);
+    if (key > 127 && event.code.length == 4 && event.code.substr(0,3) == 'Key')
+      key = event.code.charCodeAt(3);
+  } else
+    return;
+
+  //console.log(event.key);
+  //console.log(event.code);
+  //console.log(key);
+
+  var modifiers = keyModifiers(event);
+
+  //Ignore CTRL+R, CTRL+SHIFT+R
+  if (key == 114 && modifiers == 'C' || key == 82 && modifiers == 'CS') return;
+
+  cmd = 'key key=' + key + ',modifiers=' + modifiers + ",x=" + defaultMouse.x + ",y=" + defaultMouse.y;
+  //console.log(cmd);
+  viewer.command(cmd);
+}
+
+function canvasBoxMouseClick(event, mouse) {
+  mouse.element.viewer.check_context(mouse);
+
+  if (mouse.element.viewer.rotating)
+    mouse.element.viewer.command('' + mouse.element.viewer.getRotationString());
+  else
+    mouse.element.viewer.command('' + mouse.element.viewer.getTranslationString());
+
+  if (mouse.element.viewer.rotating) {
+    mouse.element.viewer.rotating = false;
+    //mouse.element.viewer.reload = true;
+  }
+
+  //Clear the webgl box
+  mouse.element.viewer.clear();
+
+  return false;
+}
+
+function canvasBoxMouseDown(event, mouse) {
+  mouse.element.viewer.check_context(mouse);
+  //Just draw so the box appears
+  mouse.element.viewer.draw();
+  return false;
+}
+
+var hideBoxTimer;
+
+function canvasBoxMouseMove(event, mouse) {
+  //GUI elements to show on mouseover
+  if (mouse.element && mouse.element.viewer && Object.keys(mouse.element.viewer.vis).length) {
+    var gui = mouse.element.viewer.gui;
+    var rect = mouse.element.getBoundingClientRect();
+    x = event.clientX-rect.left;
+    y = event.clientY-rect.top;
+    if (x >= 0 && y >= 0 && x < rect.width && y < rect.height) {
+      if (!gui && mouse.element.imgtarget)
+        mouse.element.imgtarget.nextElementSibling.style.display = "block";
+
+      if (gui) {
+        if (mouse.element.imgtarget) mouse.element.imgtarget.nextElementSibling.style.display = "none";
+        gui.domElement.style.display = "block";
+      }
+
+      if (hideBoxTimer) 
+        clearTimeout(hideBoxTimer);
+
+      hideBoxTimer = setTimeout(function () { hideMenu(mouse.element, gui);}, 1000 );
+    }
+  }
+
+  if (!mouse.isdown || !mouse.element.viewer) return true;
+  mouse.element.viewer.rotating = false;
+
+  //Switch buttons for translate/rotate
+  var button = mouse.button;
+
+  if (mouse.element.viewer.mode == "Translate") {
+    //Swap rotate/translate buttons
+    if (button == 0)
+      button = 2
+    else if (button == 2)
+      button = 0;
+  } else if (button==0 && mouse.element.viewer.mode == "Zoom") {
+      button = 100;
+  }
+
+  //console.log(mouse.deltaX + "," + mouse.deltaY);
+  switch (button)
+  {
+    case 0:
+      mouse.element.viewer.rotateY(mouse.deltaX/5);
+      mouse.element.viewer.rotateX(mouse.deltaY/5);
+      mouse.element.viewer.rotating = true;
+      break;
+    case 1:
+      mouse.element.viewer.rotateZ(Math.sqrt(mouse.deltaX*mouse.deltaX + mouse.deltaY*mouse.deltaY)/5);
+      mouse.element.viewer.rotating = true;
+      break;
+    case 2:
+      var adjust = mouse.element.viewer.modelsize / 1000;   //1/1000th of size
+      mouse.element.viewer.translate[0] += mouse.deltaX * adjust;
+      mouse.element.viewer.translate[1] -= mouse.deltaY * adjust;
+      break;
+    case 100:
+      var adjust = mouse.element.viewer.modelsize / 1000;   //1/1000th of size
+      mouse.element.viewer.translate[2] += mouse.deltaX * adjust;
+      break;
+  }
+
+  mouse.element.viewer.draw();
+
+  //Instant updates
+  if (mouse.element.viewer.alwaysdraw) {
+    if (mouse.element.viewer.rotating)
+      mouse.element.viewer.command('' + mouse.element.viewer.getRotationString());
+    else
+      mouse.element.viewer.command('' + mouse.element.viewer.getTranslationString());
+  }
+
+  return false;
+}
+
+function canvasBoxMouseWheel(event, mouse) {
+  mouse.element.viewer.check_context(mouse);
+  var scroll = event.deltaY < 0 ? 0.01 : -0.01;
+  //console.log(event.shiftKey,event.deltaY * -0.01);
+  if (event.shiftKey) {
+    mouse.element.viewer.zoomClip(scroll);
+    //mouse.element.viewer.zoomClip(event.spin*0.01);
+  } else {
+    mouse.element.viewer.zoom(scroll);
+    //mouse.element.viewer.zoom(event.spin*0.01);
+  }
+  return false; //Prevent default
+}
+
+function canvasBoxMousePinch(event, mouse) {
+  mouse.element.viewer.check_context(mouse);
+  if (event.distance != 0) {
+    var factor = event.distance * 0.0001;
+    mouse.element.viewer.zoom(factor);
+    //Clear the box after a second
+    setTimeout(function() {mouse.element.viewer.clear();}, 1000);
+  }
+  return false; //Prevent default
+}
+
+//This object encapsulates a vertex buffer and shader set
+function BoxRenderer(gl, colour) {
+  this.gl = gl;
+  if (colour)
+    this.colour = colour;
+  else
+    this.colour = [0.5, 0.5, 0.5, 1.0];
+
+  //Line renderer
+  this.attribSizes = [3 * Float32Array.BYTES_PER_ELEMENT];
+
+  this.elements = 0;
+  this.elementSize = 0;
+  for (var i=0; i<this.attribSizes.length; i++)
+    this.elementSize += this.attribSizes[i];
+}
+
+var vs = "precision highp float; \n \
+attribute vec3 aVertexPosition; \n \
+attribute vec4 aVertexColour; \n \
+uniform mat4 uMVMatrix; \n \
+uniform mat4 uPMatrix; \n \
+uniform vec4 uColour; \n \
+varying vec4 vColour; \n \
+void main(void) \n \
+{ \n \
+  vec4 mvPosition = uMVMatrix * vec4(aVertexPosition, 1.0); \n \
+  gl_Position = uPMatrix * mvPosition; \n \
+  vColour = uColour; \n \
+}";
+
+var fs = "precision highp float; \n \
+varying vec4 vColour; \n \
+void main(void) \n \
+{ \n \
+  gl_FragColor = vColour; \n \
+}";
+
+BoxRenderer.prototype.init = function() {
+  //Compile the shaders
+  this.program = new WebGLProgram(this.gl, vs, fs);
+  if (this.program.errors) console.log(this.program.errors);
+  //Setup attribs/uniforms (flag set to skip enabling attribs)
+  this.program.setup(undefined, undefined, true);
+
+  return true;
+}
+
+BoxRenderer.prototype.updateBuffers = function(view) {
+  //Create buffer if not yet allocated
+  if (this.vertexBuffer == undefined) {
+    //Init shaders etc...
+    if (!this.init()) return;
+    this.vertexBuffer = this.gl.createBuffer();
+    this.indexBuffer = this.gl.createBuffer();
+  }
+
+  //Bind buffers
+  this.gl.bindBuffer(this.gl.ARRAY_BUFFER, this.vertexBuffer);
+  this.gl.bindBuffer(this.gl.ELEMENT_ARRAY_BUFFER, this.indexBuffer);
+
+  this.box(view.min, view.max);
+}
+
+BoxRenderer.prototype.box = function(min, max) {
+  var zero = [min[0]+0.5*(max[0] - min[0]), min[1]+0.5*(max[1] - min[1]), min[2]+0.5*(max[2] - min[2])];
+  var min10 = [min[0] + 0.45*(max[0] - min[0]), min[1]+0.45*(max[1] - min[1]), min[2]+0.45*(max[2] - min[2])];
+  var max10 = [min[0] + 0.55*(max[0] - min[0]), min[1]+0.55*(max[1] - min[1]), min[2]+0.55*(max[2] - min[2])];
+  var vertices = new Float32Array(
+        [
+          /* Bounding box */
+          min[0], min[1], max[2],
+          min[0], max[1], max[2],
+          max[0], max[1], max[2],
+          max[0], min[1], max[2],
+          min[0], min[1], min[2],
+          min[0], max[1], min[2],
+          max[0], max[1], min[2],
+          max[0], min[1], min[2],
+          /* 10% box */
+          min10[0], min10[1], max10[2],
+          min10[0], max10[1], max10[2],
+          max10[0], max10[1], max10[2],
+          max10[0], min10[1], max10[2],
+          min10[0], min10[1], min10[2],
+          min10[0], max10[1], min10[2],
+          max10[0], max10[1], min10[2],
+          max10[0], min10[1], min10[2],
+          /* Axis lines */
+          min[0], zero[1], zero[2],
+          max[0], zero[1], zero[2],
+          zero[0], min[1], zero[2],
+          zero[0], max[1], zero[2],
+          zero[0], zero[1], min[2],
+          zero[0], zero[1], max[2]
+        ]);
+
+  var indices = new Uint16Array(
+        [
+          /* Bounding box */
+          0, 1, 1, 2, 2, 3, 3, 0,
+          4, 5, 5, 6, 6, 7, 7, 4,
+          0, 4, 3, 7, 1, 5, 2, 6,
+          /* 10% box */
+          8, 9, 9, 10, 10, 11, 11, 8,
+          12, 13, 13, 14, 14, 15, 15, 12,
+          8, 12, 11, 15, 9, 13, 10, 14,
+          /* Axis lines */
+          16, 17,
+          18, 19,
+          20, 21
+        ]
+     );
+  this.gl.bufferData(this.gl.ARRAY_BUFFER, vertices, this.gl.STATIC_DRAW);
+  this.gl.bufferData(this.gl.ELEMENT_ARRAY_BUFFER, indices, this.gl.STATIC_DRAW);
+  this.elements = 24+24+6;
+}
+
+BoxRenderer.prototype.draw = function(webgl, nobox, noaxes) {
+  if (!this.elements) return;
+
+  if (this.program.attributes["aVertexPosition"] == undefined) return; //Require vertex buffer
+
+  webgl.use(this.program);
+  webgl.setMatrices();
+
+  //Bind buffers
+  this.gl.bindBuffer(this.gl.ARRAY_BUFFER, this.vertexBuffer);
+  this.gl.bindBuffer(this.gl.ELEMENT_ARRAY_BUFFER, this.indexBuffer);
+
+  //Enable attributes
+  for (var key in this.program.attributes)
+    this.gl.enableVertexAttribArray(this.program.attributes[key]);
+
+ 
+  //Line box render
+  this.gl.vertexAttribPointer(this.program.attributes["aVertexPosition"], 3, this.gl.FLOAT, false, 0, 0);
+  //Bounding box
+  if (!nobox) {
+    this.gl.uniform4f(this.program.uniforms["uColour"], this.colour[0], this.colour[1], this.colour[2], this.colour[3]);
+    this.gl.drawElements(this.gl.LINES, 24, this.gl.UNSIGNED_SHORT, 0);
+  }
+
+  //10% box (always draw)
+  this.gl.drawElements(this.gl.LINES, 24, this.gl.UNSIGNED_SHORT, 24 * 2);
+
+  //Axes (2 bytes per unsigned short)
+  if (!noaxes) {
+    this.gl.uniform4f(this.program.uniforms["uColour"], 1.0, 0.0, 0.0, 1.0);
+    this.gl.drawElements(this.gl.LINES, 2, this.gl.UNSIGNED_SHORT, (24+24) * 2);
+    this.gl.uniform4f(this.program.uniforms["uColour"], 0.0, 1.0, 0.0, 1.0);
+    this.gl.drawElements(this.gl.LINES, 2, this.gl.UNSIGNED_SHORT, (24+24+2) * 2);
+    this.gl.uniform4f(this.program.uniforms["uColour"], 0.0, 0.0, 1.0, 1.0);
+    this.gl.drawElements(this.gl.LINES, 2, this.gl.UNSIGNED_SHORT, (24+24+4) * 2);
+  }
+
+  //Disable attribs
+  for (var key in this.program.attributes)
+    this.gl.disableVertexAttribArray(this.program.attributes[key]);
+
+  this.gl.bindBuffer(this.gl.ARRAY_BUFFER, null);
+  this.gl.bindBuffer(this.gl.ELEMENT_ARRAY_BUFFER, null);
+  this.gl.useProgram(null);
+}
+
+//This object holds the viewer details and calls the renderers
+function BoxViewer(canvas) {
+  this.vis = {};
+  this.vis.objects = [];
+  this.vis.colourmaps = [];
+  this.canvas = canvas;
+  if (!canvas) {alert("Invalid Canvas"); return;}
+  try {
+    this.webgl = new WebGL(this.canvas, {antialias: true}); //, premultipliedAlpha: false});
+    this.gl = this.webgl.gl;
+    canvas.addEventListener("webglcontextlost", function(event) {
+      //event.preventDefault();
+      console.log("Context loss detected, clearing data/state and flagging defunct");
+      this.mouse.lostContext = true;
+    }, false);
+
+    canvas.addEventListener("webglcontextrestored", function(event) {
+      console.log("Context restored");
+    }, false);
+
+  } catch(e) {
+    //No WebGL
+    console.log("No WebGL: " + e);
+  }
+
+  this.rotating = false;
+  this.translate = [0,0,0];
+  this.rotate = quat4.create();
+  quat4.identity(this.rotate);
+  this.fov = 45;
+  this.focus = [0,0,0];
+  this.centre = [0,0,0];
+  this.near_clip = this.far_clip = 0.0;
+  this.modelsize = 1;
+  this.scale = [1, 1, 1];
+  this.orientation = 1.0; //1.0 for RH, -1.0 for LH
+
+  //Non-persistant settings
+  this.mode = 'Rotate';
+  this.alwaysdraw = false;
+  if (!this.gl) return;
+
+  //Create the renderers
+  this.border = new BoxRenderer(this.gl, [0.5,0.5,0.5,1]);
+
+  this.gl.enable(this.gl.DEPTH_TEST);
+  this.gl.depthFunc(this.gl.LEQUAL);
+  //this.gl.depthMask(this.gl.FALSE);
+  this.gl.enable(this.gl.BLEND);
+  //this.gl.blendFunc(this.gl.SRC_ALPHA, this.gl.ONE_MINUS_SRC_ALPHA);
+  //this.gl.blendFuncSeparate(this.gl.SRC_ALPHA, this.gl.ONE_MINUS_SRC_ALPHA, this.gl.ZERO, this.gl.ONE);
+  this.gl.blendFuncSeparate(this.gl.SRC_ALPHA, this.gl.ONE_MINUS_SRC_ALPHA, this.gl.ONE, this.gl.ONE_MINUS_SRC_ALPHA);
+}
+
+BoxViewer.prototype.check_context = function(mouse) {
+  if (mouse.lostContext) {
+    console.log("Recreating viewer after context loss");
+    //Reinit on timer? on click?
+    var box = initBox(this.canvas.imgtarget, this.command);
+    box.loadFile(JSON.stringify(this.vis));
+    //Delete the old canvas now
+    this.canvas.parentNode.removeChild(this.canvas);
+    this.vis = null;
+    mouse.lostContext = false;
+    this.deleted = true;
+  }
+}
+
+BoxViewer.prototype.reload = function() {
+  this.command('reload');
+}
+
+BoxViewer.prototype.checkPointMinMax = function(coord) {
+  for (var i=0; i<3; i++) {
+    this.view.min[i] = Math.min(coord[i], this.view.min[i]);
+    this.view.max[i] = Math.max(coord[i], this.view.max[i]);
+  }
+  //console.log(JSON.stringify(this.view.min) + " -- " + JSON.stringify(this.view.max));
+}
+
+function Merge(obj1, obj2) {
+  for (var p in obj2) {
+    try {
+      //console.log(p + " ==> " + obj2[p].constructor);
+      // Property in destination object set; update its value.
+      if (!obj2.hasOwnProperty(p)) continue;
+      if (obj2[p].constructor == Object || obj2[p].constructor == Array) {
+        obj1[p] = Merge(obj1[p], obj2[p]);
+      } else {
+        //Just copy
+        obj1[p] = obj2[p];
+      }
+    } catch(e) {
+      // Property in destination object not set; create it and set its value.
+      obj1[p] = obj2[p];
+    }
+  }
+
+  //Clear any keys in obj1 that are not in obj2
+  for (var p in obj1) {
+    if (!obj1.hasOwnProperty(p)) continue; //Ignore built in keys
+    if (p in obj2) continue;
+    if (typeof(obj1[p]) != 'object') {
+      //Just delete
+      delete obj1[p]
+    }
+  }
+
+  return obj1;
+}
+
+BoxViewer.prototype.exportJson = function(nocam) {
+  return {"objects"    : this.exportObjects(),
+          "colourmaps" : this.vis.colourmaps,
+          "views"      : this.exportView(nocam),
+          "properties" : this.vis.properties};
+}
+
+BoxViewer.prototype.sendState = function(reload) {
+  var exp = this.exportJson();
+  exp.reload = reload;
+  this.command(JSON.stringify(exp));
+}
+
+BoxViewer.prototype.toString = function(nocam, reload, noformat) {
+  var exp = this.exportJson(nocam);
+  exp.exported = true;
+  exp.reload = reload ? true : false;
+
+  if (noformat)
+    return JSON.stringify(exp);
+  //Export with 2 space indentation
+  return JSON.stringify(exp, undefined, 2);
+}
+
+BoxViewer.prototype.exportView = function(nocam) {
+  //Update camera settings of current view
+  if (nocam)
+    this.view = {};
+  else {
+    this.view.rotate = this.getRotation();
+    this.view.focus = this.focus;
+    this.view.translate = this.translate;
+    //Allows scale editing in UI by commenting this
+    //this.view.scale = this.scale;
+  }
+  /*
+   * If we overwrite these, changes from menu will not apply
+   *
+  this.view.fov = this.fov;
+  this.view.near = this.near_clip;
+  this.view.far = this.far_clip;
+  this.view.border = this.showBorder ? 1 : 0;
+  this.view.axis = this.axes;
+  */
+  //this.view.background = this.background.toString();
+
+  //Never export min/max
+  var V = Object.assign(this.view);
+  V.min = undefined;
+  V.max = undefined;
+  return [V];
+}
+
+BoxViewer.prototype.exportObjects = function() {
+  objs = [];
+  for (var id in this.vis.objects) {
+    objs[id] = {};
+    //Skip geometry data
+    for (var type in this.vis.objects[id]) {
+      if (type != "triangles" && type != "points" && type != 'lines' && type != "volume") {
+        objs[id][type] = this.vis.objects[id][type];
+      }
+    }
+  }
+  //console.log("OBJECTS: " + JSON.stringify(objs));
+
+  return objs;
+}
+
+BoxViewer.prototype.exportColourMaps = function() {
+  return this.vis.colourmaps;
+//DEPRECATED
+  //Below extracts map from gui editor, not needed unless editor hasn't updated vis object
+  cmaps = [];
+  if (this.vis.colourmaps) {
+    for (var i=0; i<this.vis.colourmaps.length; i++) {
+      console.log(i + " - " + this.vis.colourmaps[i].palette);
+      if (!this.vis.colourmaps[i].palette) continue;
+      cmaps[i] = this.vis.colourmaps[i].palette.get();
+      //Copy additional properties
+      for (var type in this.vis.colourmaps[i]) {
+        if (type != "palette" && type != "colours")
+          cmaps[i][type] = this.vis.colourmaps[i][type];
+      }
+    }
+  }
+  return cmaps;
+}
+
+BoxViewer.prototype.exportFile = function() {
+  window.open('data:text/plain;base64,' + window.btoa(this.toString(false, true)));
+}
+
+BoxViewer.prototype.loadFile = function(source) {
+  //Skip update to rotate/translate etc if in process of updating
+  //if (document.mouse.isdown) return;
+  if (source.length < 3) {
+    console.log('Invalid source data, ignoring');
+    console.log(source);
+    console.log(BoxViewer.prototype.loadFile.caller);
+    return; //Invalid
+  }
+
+  if (!this.vis)
+    this.vis = {};
+
+  //Parse data
+  var src = {};
+  try {
+    src = JSON.parse(source);
+  } catch(e) {
+    console.log(source);
+    console.log("Parse Error: " + e);
+    return;
+  }
+
+  //Before merge, delete all colourmap data if changed
+  for (var c in this.vis.colourmaps) {
+    //Name or colour count mismatch? delete so can be recreated
+    if (this.vis.colourmaps[c].name != src.colourmaps[c].name || 
+        this.vis.colourmaps[c].colours.length != src.colourmaps[c].colours.length) {
+      //Delete the colourmap folder for this map, will be re-created
+      if (this.cgui && this.cgui.__folders[this.vis.colourmaps[c].name]) {
+        this.cgui.removeFolder(this.cgui.__folders[this.vis.colourmaps[c].name]);
+        this.cgui.__folders[this.vis.colourmaps[c].name] = undefined;
+      }
+      //Clear all the colours so new data will replace in merge
+      this.vis.colourmaps[c].colours = undefined;
+    }
+  }
+
+  //Merge keys - preserves original objects for gui access
+  Merge(this.vis, src);
+
+  //No model loaded? Prevents errors so default are loaded
+  if (!this.vis.properties)
+    this.vis.properties = {};
+
+  //Set active view (always first for now)
+  this.view = this.vis.views[0];
+
+  //Always set a bounding box, get from objects if not in view
+  var objbb = false;
+  if (!this.view.min || !this.view.max) {
+    this.view.min = [Number.MAX_VALUE, Number.MAX_VALUE, Number.MAX_VALUE];
+    this.view.max = [-Number.MAX_VALUE, -Number.MAX_VALUE, -Number.MAX_VALUE];
+    objbb = true;
+  }
+  //console.log(JSON.stringify(this.view,null, 2));
+
+  if (this.view) {
+    this.fov = this.view.fov || 45;
+    this.near_clip = this.view.near || 0;
+    this.far_clip = this.view.far || 0;
+    this.orientation = this.view.orientation || 1;
+    this.axes = this.view.axis == undefined ? true : this.view.axis;
+  }
+
+  if (this.vis.properties.resolution && this.vis.properties.resolution[0] && this.vis.properties.resolution[1]) {
+    this.width = this.vis.properties.resolution[0];
+    this.height = this.vis.properties.resolution[1];
+    //this.canvas.style.width = "";
+    //this.canvas.style.height = "";
+  } else {
+    //Autosize when img loaded
+    this.width = 0;
+    this.height = 0;
+  }
+
+  //Process object data
+  for (var id in this.vis.objects) {
+    //Apply object bounding box
+    if (objbb && this.vis.objects[id].min)
+      this.checkPointMinMax(this.vis.objects[id].min);
+    if (objbb && this.vis.objects[id].max)
+      this.checkPointMinMax(this.vis.objects[id].max);
+  }
+
+  this.updateDims(this.view);
+
+  //Update display
+  if (!this.gl) return;
+  this.draw();
+  this.clear();
+
+  //Create UI - disable by omitting dat.gui.min.js
+  //(If menu doesn't exist or is open, update immediately
+  // otherwise, wait until clicked/opened as update is slow)
+  if (!this.gui || !this.gui.closed)
+    this.menu();
+  else
+    this.reloadgui = true;
+
+  //Copy updated values to all generated controls
+  //This allows data changed by other means (ie: through python) to 
+  // be reflected in the HTML control values
+  var that = this;
+  var getValWithIndex = function(prop, val, idx) {
+    if (val === undefined) return;
+    if (idx != null && idx >= 0 && val.length > idx)
+       val = val[idx];
+    //Round off floating point numbers
+    if (that.dict[property].type.indexOf('real') >= 0)
+       return val.toFixed(6) / 1; //toFixed() / 1 rounds to fixed position and removes trailing zeros
+    return val;
+  }
+  var pel = this.canvas.parentElement.parentElement;
+  var children = pel.getElementsByTagName('*');
+  for (var i=0; i<children.length; i++) {
+    //Process property controls
+    var id = children[i].id;
+    if (id.indexOf('lvctrl') >= 0) {
+      var target = children[i].getAttribute("data-target");
+      var property = children[i].getAttribute("data-property");
+      var idx = children[i].getAttribute("data-index");
+      //console.log(id + " : " + target + " : " + property + " [" + idx + "]");
+      if (property) {
+        if (target) {
+          //Loop through objects, find those whose name matches element target
+          for (var o in this.vis.objects) {
+            var val = this.vis.objects[o][property];
+            if (val === undefined) continue;
+            if (this.vis.objects[o].name == target) {
+              if (idx != null && idx >= 0)
+                val = val[idx];
+              //console.log(target + " ==> SET " + id + " : ['" + property + "'] VALUE TO " + val);
+              //console.log("TAG: " + children[i].tagName);
+              if (children[i].type == 'checkbox')
+                children[i].checked = val;
+              else if (children[i].tagName == 'SELECT') {
+                //If integer, set by index, otherwise set by value
+                var parsed = parseInt(val);
+                if (isNaN(parsed) || parsed.toString() != val) {
+                  //If the value is in the options, set it, otherwise leave as is
+                  for (var c in children[i].options) {
+                    if (children[i].options[c].value == val) {
+                      children[i].selectedIndex = c;
+                      break;
+                    }
+                  }
+                } else {
+                  children[i].selectedIndex = parsed;
+                }
+              } else if (children[i].tagName == 'DIV') {
+                children[i].style.background = new Colour(val).html();
+              } else if (children[i].tagName == 'CANVAS' && children[i].gradient) {
+                //Store full list of colourmaps
+                var el = children[i]; //canvas element
+                //Ensure we aren't merging the same object
+                el.colourmaps = Merge(JSON.parse(JSON.stringify(el.colourmaps)), this.vis.colourmaps);
+                //Load the initial colourmap
+                if (!el.selectedIndex >= 0) {
+                  //Get the selected index from the property value
+                  for (var c in this.vis.colourmaps) {
+                    if (this.vis.colourmaps[c].name == val) {
+                      el.selectedIndex = c;
+                      //Copy, don't link
+                      el.currentmap = JSON.parse(JSON.stringify(this.vis.colourmaps[c]));
+                      //el.currentmap = Object.assign(this.vis.colourmaps[c]);
+                      break;
+                    }
+                  }
+                }
+                //Can't use gradient.read() here as it triggers another state load,
+                //looping infinitely - so load the palette change directly
+                el.gradient.palette = new Palette(this.vis.colourmaps[el.selectedIndex].colours, true);
+                //el.gradient.reset(); //For some reason this screws up colour editing
+                el.gradient.update(true); //Update without triggering callback that triggers a state reload
+              } else {
+                //console.log(id + " : " + target + " : " + property + " = " + val);
+                children[i].value = getValWithIndex(property, val, idx);
+              }
+            }
+          }
+        } else if (this.vis.views[0][property] != null) {
+          //View property
+          var val = this.vis.views[0][property];
+          //console.log("SET " + id + " : ['" + property + "'] VIEW PROP VALUE TO " + val);
+          children[i].value = getValWithIndex(property, val, idx);
+        } else if (this.vis.properties[property] != null) {
+          //Global property
+          var val = this.vis.properties[property];
+          //console.log("SET " + id + " : ['" + property + "'] GLOBAL VALUE TO " + val);
+          children[i].value = getValWithIndex(property, val, idx);
+        }
+      }
+    }
+  }
+}
+
+BoxViewer.prototype.menu = function() {
+  //Create UI - disable by omitting dat.gui.min.js
+  //This is slow! Don't call while animating
+  var viewer = this;
+  var changefn = function(value, reload) {
+    //console.log(JSON.stringify(Object.keys(this)));
+    //console.log(value);
+    if (reload == undefined) {
+      reload = true;
+      if (this.property && viewer.dict[this.property])
+      {
+        //Get reload level from prop dict
+        //console.log(this.property + " REDRAW: " + viewer.dict[this.property].redraw);
+        reload = viewer.dict[this.property].redraw;
+      }
+    }
+
+    //Sync state and reload
+    viewer.sendState(reload);
+  };
+
+  if (!this.gui || this.gui.closed) {
+    //Re-create from scratch if closed or not present
+    createMenu(this, changefn);
+  } else {
+    updateMenu(this, changefn);
+  }
+  this.reloadgui = false;
+}
+
+BoxViewer.prototype.clear = function() {
+  if (!this.gl) return;
+  this.gl.clear(this.gl.COLOR_BUFFER_BIT | this.gl.DEPTH_BUFFER_BIT);
+}
+
+BoxViewer.prototype.draw = function() {
+  if (!this.canvas) return;
+
+  //Get the dimensions from the current canvas
+  if (this.width != this.canvas.offsetWidth || this.height != this.canvas.offsetHeight) {
+    this.width = this.canvas.offsetWidth;
+    this.height = this.canvas.offsetHeight;
+    //Need to set this too for some reason
+    this.canvas.width = this.width;
+    this.canvas.height = this.height;
+    if (this.gl) {
+      this.gl.viewportWidth = this.width;
+      this.gl.viewportHeight = this.height;
+      this.webgl.viewport = new Viewport(0, 0, this.width, this.height);
+    }
+  }
+
+  /*/Attempt to prevent element resizing to 0,0 when a frame is dropped
+  if (this.width)
+    this.canvas.parentElement.style.minWidth = this.width + 'px';
+  if (this.height)
+    this.canvas.parentElement.style.minHeight = this.height + 'px';
+  */
+
+  if (!this.gl) return;
+
+  //Check isContextLost
+  if (this.gl.isContextLost()) {
+    console.log("boxviewer_draw_: context lost");
+    this.mouse.lostContext = true;
+    return;
+  }
+
+  this.gl.viewport(0, 0, this.gl.viewportWidth, this.gl.viewportHeight);
+  //this.gl.clearColor(1, 1, 1, 0);
+  this.gl.clearColor(0, 0, 0, 0);
+  this.gl.clear(this.gl.COLOR_BUFFER_BIT | this.gl.DEPTH_BUFFER_BIT);
+
+  this.webgl.view(this);
+
+  //Render objects
+  this.border.draw(this.webgl, false, true);
+
+    //Remove translation and re-render axes
+    var tr = this.translate.slice();
+    this.translate = [0,0,-this.modelsize*1.25];
+    this.webgl.apply(this);
+    this.border.draw(this.webgl, true, false);
+    this.translate = tr;
+}
+
+BoxViewer.prototype.syncRotation = function(rot) {
+  if (rot)
+    this.rotate = quat4.create(rot);
+  this.rotated = true;
+  this.draw();
+  rstr = '' + this.getRotationString();
+  that = this;
+  window.requestAnimationFrame(function() {that.command(rstr);});
+}
+
+BoxViewer.prototype.rotateX = function(deg) {
+  this.rotation(deg, [1,0,0]);
+}
+
+BoxViewer.prototype.rotateY = function(deg) {
+  this.rotation(deg, [0,1,0]);
+}
+
+BoxViewer.prototype.rotateZ = function(deg) {
+  this.rotation(deg, [0,0,1]);
+}
+
+BoxViewer.prototype.rotation = function(deg, axis) {
+  //Quaterion rotate
+  var arad = deg * Math.PI / 180.0;
+  var rotation = quat4.fromAngleAxis(arad, axis);
+  rotation = quat4.normalize(rotation);
+  this.rotate = quat4.multiply(rotation, this.rotate);
+}
+
+BoxViewer.prototype.getRotation = function() {
+  return [this.rotate[0], this.rotate[1], this.rotate[2], this.rotate[3]];
+}
+
+BoxViewer.prototype.getRotationString = function() {
+  //Return current rotation quaternion as string
+  var q = this.getRotation();
+  return 'rotation ' + q[0] + ' ' + q[1] + ' ' + q[2] + ' ' + q[3];
+}
+
+BoxViewer.prototype.getTranslationString = function() {
+  return 'translation ' + this.translate[0] + ' ' + this.translate[1] + ' ' + this.translate[2];
+}
+
+BoxViewer.prototype.reset = function() {
+  if (this.gl) {
+    this.updateDims(this.view);
+    this.draw();
+  }
+
+  this.command('reset');
+}
+
+BoxViewer.prototype.zoom = function(factor) {
+  if (this.gl) {
+    this.translate[2] += factor * Math.max(0.01*this.modelsize, Math.abs(this.translate[2]));
+    this.draw();
+  }
+
+  var that = this;
+  if (this.zoomTimer) 
+    clearTimeout(this.zoomTimer);
+  this.zoomTimer = setTimeout(function () {that.command('' + that.getTranslationString());  that.clear(); that.zoomTimer = null;}, 500 );
+
+  //this.command('' + this.getTranslationString());
+  //this.command('zoom ' + factor);
+}
+
+BoxViewer.prototype.zoomClip = function(factor) {
+  var near_clip = this.near_clip + factor * this.modelsize;
+  if (near_clip >= this.modelsize * 0.001)
+     this.near_clip = near_clip;
+
+  if (this.gl) this.draw();
+
+  var that = this;
+  if (this.zoomTimer) clearTimeout(this.zoomTimer);
+  //this.zoomTimer = setTimeout(function () {that.command('zoomclip ' + factor);  that.clear();}, 500 );
+  this.zoomTimer = setTimeout(function () {that.command('nearclip ' + that.near_clip);  that.clear();}, 500 );
+
+  //this.command('zoomclip ' + factor);
+}
+
+BoxViewer.prototype.updateDims = function(view) {
+  if (!view) return;
+  var oldsize = this.modelsize;
+
+  //Check for valid dims
+  for (var i=0; i<3; i++) {
+    if (view.bounds && view.max[i] < view.bounds.max[i])
+      view.max[i] = view.bounds.max[i];
+    if (view.bounds && view.min[i] > view.bounds.min[i])
+      view.min[i] = view.bounds.min[i];
+    /*if (view.max[i] <  view.min[i] <= 0.0) {
+        view.max[i] = 1.0;
+        view.min[i] = -1.0;
+      }
+    }*/
+  }
+
+  this.dims = [view.max[0] - view.min[0], view.max[1] - view.min[1], view.max[2] - view.min[2]];
+  this.modelsize = Math.sqrt(this.dims[0]*this.dims[0] + this.dims[1]*this.dims[1] + this.dims[2]*this.dims[2]);
+
+  this.focus = [view.min[0] + 0.5*this.dims[0], view.min[1] + 0.5*this.dims[1], view.min[2] + 0.5*this.dims[2]];
+  this.centre = [this.focus[0],this.focus[1],this.focus[2]];
+
+  this.translate = [0,0,0];
+  if (this.modelsize != oldsize) this.translate[2] = -this.modelsize*1.25;
+
+  if (this.near_clip == 0.0) this.near_clip = this.modelsize / 10.0;   
+  if (this.far_clip == 0.0) this.far_clip = this.modelsize * 10.0;
+
+  quat4.identity(this.rotate);
+
+  if (view) {
+    //Initial rotation
+    if (view.rotate) {
+      if (view.rotate.length == 3) {
+        this.rotateZ(-view.rotate[2]);
+        this.rotateY(-view.rotate[1]);
+        this.rotateX(-view.rotate[0]);
+      } else if (view.rotate.length == 4) {
+        this.rotate = quat4.create(view.rotate);
+      }
+    }
+
+    //Translate
+    if (view.translate) {
+      this.translate[0] = view.translate[0];
+      this.translate[1] = view.translate[1];
+      this.translate[2] = view.translate[2];
+    }
+
+    //Scale
+    if (view.scale) {
+      this.scale[0] = view.scale[0];
+      this.scale[1] = view.scale[1];
+      this.scale[2] = view.scale[2];
+    }
+
+    //Focal point
+    if (view.focus) {
+      this.focus[0] = this.centre[0] = view.focus[0];
+      this.focus[1] = this.centre[1] = view.focus[1];
+      this.focus[2] = this.centre[2] = view.focus[2];
+    }
+
+  }
+
+  //console.log("DIMS: " + view.min[0] + " to " + view.max[0] + "," + view.min[1] + " to " + view.max[1] + "," + view.min[2] + " to " + view.max[2]);
+  //console.log("New model size: " + this.modelsize + ", Focal point: " + this.focus[0] + "," + this.focus[1] + "," + this.focus[2]);
+  //console.log("Translate: " + this.translate[0] + "," + this.translate[1] + "," + this.translate[2]);
+
+  if (!this.gl) return;
+ 
+  //Create the bounding box vertex buffer
+  this.border.updateBuffers(this.view);
+}
+