lamindb 0.77.2__py3-none-any.whl → 1.0rc1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (89) hide show
  1. lamindb/__init__.py +39 -32
  2. lamindb/_artifact.py +95 -64
  3. lamindb/_can_curate.py +19 -10
  4. lamindb/_collection.py +51 -49
  5. lamindb/_feature.py +9 -9
  6. lamindb/_finish.py +99 -86
  7. lamindb/_from_values.py +20 -17
  8. lamindb/_is_versioned.py +2 -1
  9. lamindb/_parents.py +23 -16
  10. lamindb/_query_manager.py +3 -3
  11. lamindb/_query_set.py +85 -18
  12. lamindb/_record.py +121 -46
  13. lamindb/_run.py +3 -3
  14. lamindb/_save.py +14 -8
  15. lamindb/{_feature_set.py → _schema.py} +34 -31
  16. lamindb/_storage.py +2 -1
  17. lamindb/_transform.py +51 -23
  18. lamindb/_ulabel.py +17 -8
  19. lamindb/_view.py +15 -14
  20. lamindb/base/__init__.py +24 -0
  21. lamindb/base/fields.py +281 -0
  22. lamindb/base/ids.py +103 -0
  23. lamindb/base/types.py +51 -0
  24. lamindb/base/users.py +30 -0
  25. lamindb/base/validation.py +67 -0
  26. lamindb/core/__init__.py +19 -14
  27. lamindb/core/_context.py +297 -228
  28. lamindb/core/_data.py +44 -49
  29. lamindb/core/_describe.py +41 -31
  30. lamindb/core/_django.py +59 -44
  31. lamindb/core/_feature_manager.py +192 -168
  32. lamindb/core/_label_manager.py +22 -22
  33. lamindb/core/_mapped_collection.py +17 -14
  34. lamindb/core/_settings.py +1 -12
  35. lamindb/core/_sync_git.py +56 -9
  36. lamindb/core/_track_environment.py +1 -1
  37. lamindb/core/datasets/_core.py +5 -6
  38. lamindb/core/exceptions.py +0 -7
  39. lamindb/core/fields.py +1 -1
  40. lamindb/core/loaders.py +18 -2
  41. lamindb/core/{schema.py → relations.py} +22 -19
  42. lamindb/core/storage/_anndata_accessor.py +1 -2
  43. lamindb/core/storage/_backed_access.py +2 -1
  44. lamindb/core/storage/_tiledbsoma.py +40 -13
  45. lamindb/core/storage/objects.py +1 -1
  46. lamindb/core/storage/paths.py +13 -8
  47. lamindb/core/subsettings/__init__.py +0 -2
  48. lamindb/core/types.py +2 -23
  49. lamindb/core/versioning.py +11 -7
  50. lamindb/{_curate.py → curators/__init__.py} +700 -57
  51. lamindb/curators/_spatial.py +528 -0
  52. lamindb/integrations/_vitessce.py +1 -3
  53. lamindb/migrations/0052_squashed.py +1261 -0
  54. lamindb/migrations/0053_alter_featureset_hash_alter_paramvalue_created_by_and_more.py +57 -0
  55. lamindb/migrations/0054_alter_feature_previous_runs_and_more.py +35 -0
  56. lamindb/migrations/0055_artifact_type_artifactparamvalue_and_more.py +61 -0
  57. lamindb/migrations/0056_rename_ulabel_ref_is_name_artifactulabel_label_ref_is_name_and_more.py +22 -0
  58. lamindb/migrations/0057_link_models_latest_report_and_others.py +356 -0
  59. lamindb/migrations/0058_artifact__actions_collection__actions.py +22 -0
  60. lamindb/migrations/0059_alter_artifact__accessor_alter_artifact__hash_type_and_more.py +31 -0
  61. lamindb/migrations/0060_alter_artifact__actions.py +22 -0
  62. lamindb/migrations/0061_alter_collection_meta_artifact_alter_run_environment_and_more.py +45 -0
  63. lamindb/migrations/0062_add_is_latest_field.py +32 -0
  64. lamindb/migrations/0063_populate_latest_field.py +45 -0
  65. lamindb/migrations/0064_alter_artifact_version_alter_collection_version_and_more.py +33 -0
  66. lamindb/migrations/0065_remove_collection_feature_sets_and_more.py +22 -0
  67. lamindb/migrations/0066_alter_artifact__feature_values_and_more.py +352 -0
  68. lamindb/migrations/0067_alter_featurevalue_unique_together_and_more.py +20 -0
  69. lamindb/migrations/0068_alter_artifactulabel_unique_together_and_more.py +20 -0
  70. lamindb/migrations/0069_alter_artifact__accessor_alter_artifact__hash_type_and_more.py +1294 -0
  71. lamindb/migrations/0069_squashed.py +1770 -0
  72. lamindb/migrations/0070_lamindbv1_migrate_data.py +78 -0
  73. lamindb/migrations/0071_lamindbv1_migrate_schema.py +741 -0
  74. lamindb/migrations/0072_remove_user__branch_code_remove_user_aux_and_more.py +148 -0
  75. lamindb/migrations/0073_merge_ourprojects.py +945 -0
  76. lamindb/migrations/0074_lamindbv1_part4.py +374 -0
  77. lamindb/migrations/0075_lamindbv1_part5.py +276 -0
  78. lamindb/migrations/0076_lamindbv1_part6.py +621 -0
  79. lamindb/migrations/0077_lamindbv1_part6b.py +228 -0
  80. lamindb/migrations/0078_lamindbv1_part6c.py +468 -0
  81. lamindb/migrations/0079_alter_rundata_value_json_and_more.py +36 -0
  82. lamindb/migrations/__init__.py +0 -0
  83. lamindb/models.py +4064 -0
  84. {lamindb-0.77.2.dist-info → lamindb-1.0rc1.dist-info}/METADATA +15 -20
  85. lamindb-1.0rc1.dist-info/RECORD +100 -0
  86. {lamindb-0.77.2.dist-info → lamindb-1.0rc1.dist-info}/WHEEL +1 -1
  87. lamindb/core/subsettings/_transform_settings.py +0 -21
  88. lamindb-0.77.2.dist-info/RECORD +0 -63
  89. {lamindb-0.77.2.dist-info → lamindb-1.0rc1.dist-info}/LICENSE +0 -0
lamindb/migrations/0072_remove_user__branch_code_remove_user_aux_and_more.py ADDED
@@ -0,0 +1,148 @@
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+ # Generated by Django 5.2 on 2025-01-11 16:44
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+
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+ import django.db.models.deletion
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+ from django.db import migrations
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+
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+ import lamindb.base.fields
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+
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+
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+ class Migration(migrations.Migration):
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+ dependencies = [
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+ ("lamindb", "0071_lamindbv1_migrate_schema"),
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+ ]
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+
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+ operations = [
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+ migrations.RemoveField(
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+ model_name="user",
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+ name="_branch_code",
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+ ),
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+ migrations.RemoveField(
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+ model_name="user",
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+ name="aux",
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+ ),
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+ migrations.RemoveField(
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+ model_name="user",
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+ name="space",
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+ ),
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+ migrations.AlterField(
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+ model_name="artifact",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="collection",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="feature",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="featureset",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="featurevalue",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="param",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="paramvalue",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="run",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="storage",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="transform",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ migrations.AlterField(
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+ model_name="ulabel",
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+ name="space",
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+ field=lamindb.base.fields.ForeignKey(
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+ blank=True,
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+ db_default=1,
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+ default=1,
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+ on_delete=django.db.models.deletion.PROTECT,
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+ to="lamindb.space",
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+ ),
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+ ),
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+ ]