imas-python 0.1.dev1618__py3-none-any.whl

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  1. imas/__init__.py +34 -0
  2. imas/__main__.py +17 -0
  3. imas/_util.py +260 -0
  4. imas/_version.py +16 -0
  5. imas/assets/IDSDef2MDSpreTree.xsl +161 -0
  6. imas/assets/IDS_fake_toplevel.xml +318 -0
  7. imas/assets/IDS_minimal.xml +37 -0
  8. imas/assets/IDS_minimal_2.xml +37 -0
  9. imas/assets/IDS_minimal_struct_array.xml +43 -0
  10. imas/assets/IDS_minimal_types.xml +169 -0
  11. imas/assets/ITER_134173_106_core_profiles.ids +2438 -0
  12. imas/assets/ITER_134173_106_equilibrium.ids +3172 -0
  13. imas/assets/README.md +5 -0
  14. imas/assets/core_profiles.ids +2438 -0
  15. imas/assets/equilibrium.ids +3172 -0
  16. imas/backends/__init__.py +12 -0
  17. imas/backends/db_entry_impl.py +122 -0
  18. imas/backends/imas_core/__init__.py +4 -0
  19. imas/backends/imas_core/al_context.py +391 -0
  20. imas/backends/imas_core/db_entry_al.py +405 -0
  21. imas/backends/imas_core/db_entry_helpers.py +200 -0
  22. imas/backends/imas_core/imas_interface.py +216 -0
  23. imas/backends/imas_core/mdsplus_model.py +367 -0
  24. imas/backends/imas_core/uda_support.py +56 -0
  25. imas/backends/netcdf/__init__.py +4 -0
  26. imas/backends/netcdf/db_entry_nc.py +176 -0
  27. imas/backends/netcdf/ids2nc.py +306 -0
  28. imas/backends/netcdf/nc2ids.py +302 -0
  29. imas/backends/netcdf/nc_metadata.py +357 -0
  30. imas/backends/netcdf/nc_validate.py +53 -0
  31. imas/command/cli.py +239 -0
  32. imas/command/db_analysis.py +290 -0
  33. imas/command/helpers.py +45 -0
  34. imas/command/timer.py +77 -0
  35. imas/db_entry.py +802 -0
  36. imas/dd_helpers.py +300 -0
  37. imas/dd_zip.py +297 -0
  38. imas/exception.py +107 -0
  39. imas/ids_base.py +149 -0
  40. imas/ids_convert.py +920 -0
  41. imas/ids_coordinates.py +400 -0
  42. imas/ids_data_type.py +115 -0
  43. imas/ids_defs.py +171 -0
  44. imas/ids_factory.py +108 -0
  45. imas/ids_identifiers.py +125 -0
  46. imas/ids_metadata.py +307 -0
  47. imas/ids_path.py +254 -0
  48. imas/ids_primitive.py +510 -0
  49. imas/ids_struct_array.py +233 -0
  50. imas/ids_structure.py +331 -0
  51. imas/ids_toplevel.py +381 -0
  52. imas/setup_logging.py +64 -0
  53. imas/test/test_all_dd_versions.py +28 -0
  54. imas/test/test_cli.py +44 -0
  55. imas/test/test_dbentry.py +104 -0
  56. imas/test/test_dd_helpers.py +134 -0
  57. imas/test/test_dd_zip.py +29 -0
  58. imas/test/test_deepcopy.py +25 -0
  59. imas/test/test_exception.py +12 -0
  60. imas/test/test_get_sample.py +388 -0
  61. imas/test/test_hash.py +188 -0
  62. imas/test/test_helpers.py +354 -0
  63. imas/test/test_identifiers.py +105 -0
  64. imas/test/test_ids2nc.py +166 -0
  65. imas/test/test_ids_ascii_data.py +39 -0
  66. imas/test/test_ids_convert.py +415 -0
  67. imas/test/test_ids_coordinates.py +165 -0
  68. imas/test/test_ids_data_type.py +40 -0
  69. imas/test/test_ids_factory.py +35 -0
  70. imas/test/test_ids_metadata.py +66 -0
  71. imas/test/test_ids_mixin.py +20 -0
  72. imas/test/test_ids_path.py +192 -0
  73. imas/test/test_ids_primitive.py +109 -0
  74. imas/test/test_ids_struct_array.py +89 -0
  75. imas/test/test_ids_structure.py +70 -0
  76. imas/test/test_ids_toplevel.py +55 -0
  77. imas/test/test_ids_validate.py +343 -0
  78. imas/test/test_latest_dd_autofill.py +74 -0
  79. imas/test/test_latest_dd_manual.py +38 -0
  80. imas/test/test_latest_dd_resample.py +102 -0
  81. imas/test/test_lazy_loading.py +201 -0
  82. imas/test/test_list_occurrences.py +82 -0
  83. imas/test/test_minimal.py +37 -0
  84. imas/test/test_minimal_conversion.py +44 -0
  85. imas/test/test_minimal_io.py +21 -0
  86. imas/test/test_minimal_struct_array_io.py +60 -0
  87. imas/test/test_minimal_types.py +436 -0
  88. imas/test/test_minimal_types_io.py +70 -0
  89. imas/test/test_minimal_types_io_automatic.py +66 -0
  90. imas/test/test_nbc_change.py +408 -0
  91. imas/test/test_nc_autofill.py +13 -0
  92. imas/test/test_nc_entry.py +28 -0
  93. imas/test/test_nc_metadata.py +153 -0
  94. imas/test/test_nc_validation.py +197 -0
  95. imas/test/test_snippets.py +25 -0
  96. imas/test/test_static_ids.py +39 -0
  97. imas/test/test_str_1d.py +99 -0
  98. imas/test/test_time_slicing.py +182 -0
  99. imas/test/test_uda_support.py +12 -0
  100. imas/test/test_util.py +209 -0
  101. imas/training.py +45 -0
  102. imas/util.py +526 -0
  103. imas_python-0.1.dev1618.dist-info/LICENSE.txt +165 -0
  104. imas_python-0.1.dev1618.dist-info/METADATA +288 -0
  105. imas_python-0.1.dev1618.dist-info/RECORD +108 -0
  106. imas_python-0.1.dev1618.dist-info/WHEEL +5 -0
  107. imas_python-0.1.dev1618.dist-info/entry_points.txt +3 -0
  108. imas_python-0.1.dev1618.dist-info/top_level.txt +1 -0
@@ -0,0 +1,288 @@
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+ Metadata-Version: 2.2
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+ Name: imas-python
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+ Version: 0.1.dev1618
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+ Summary: Pythonic wrappers for the IMAS Access Layer
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+ Author: imas-python Developers
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+ Author-email: Olivier Hoenen <olivier.hoenen@iter.org>
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+ License: GNU LESSER GENERAL PUBLIC LICENSE
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+ Version 3, 29 June 2007
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+ Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
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+ Project-URL: homepage, https://github.com/iterorganization/imas-python
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+ Classifier: Development Status :: 3 - Alpha
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+ Classifier: Environment :: Console
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+ Classifier: Environment :: Plugins
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+ Classifier: Environment :: X11 Applications
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+ Classifier: Framework :: Flake8
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+ Classifier: Framework :: IPython
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+ Classifier: Framework :: Matplotlib
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+ Classifier: Framework :: Pytest
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+ Classifier: Framework :: Sphinx
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+ Classifier: Intended Audience :: Developers
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+ Classifier: Intended Audience :: Science/Research
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+ Classifier: Intended Audience :: System Administrators
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+ Classifier: License :: Other/Proprietary License
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+ Classifier: Natural Language :: English
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+ Classifier: Operating System :: POSIX
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+ Classifier: Operating System :: POSIX :: Linux
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+ Classifier: Programming Language :: Python
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Programming Language :: Python :: 3.8
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+ Classifier: Programming Language :: Python :: 3.9
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+ Classifier: Programming Language :: Unix Shell
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+ Classifier: Topic :: Database
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+ Classifier: Topic :: Database :: Front-Ends
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+ Classifier: Topic :: Scientific/Engineering
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+ Classifier: Topic :: Scientific/Engineering :: Physics
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+ Classifier: Topic :: Scientific/Engineering :: Visualization
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+ Classifier: Topic :: Software Development :: Libraries
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+ Classifier: Topic :: Software Development :: Libraries :: Python Modules
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+ Classifier: Topic :: System
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+ Classifier: Topic :: System :: Software Distribution
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+ Classifier: Topic :: Utilities
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+ Requires-Python: >=3.7
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE.txt
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+ Requires-Dist: numpy<2,>=1.15.4
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+ Requires-Dist: rich
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+ Requires-Dist: scipy
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+ Requires-Dist: click
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+ Requires-Dist: importlib_resources; python_version < "3.9"
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+ Requires-Dist: packaging
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+ Requires-Dist: xxhash>=2
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+ Provides-Extra: all
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+ Requires-Dist: imas[docs,h5py,imas-core,netcdf,test]; extra == "all"
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+ Provides-Extra: docs
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+ Requires-Dist: sphinx<7.0.0,>=6.0.0; extra == "docs"
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+ Requires-Dist: sphinx-autosummary-accessors>=0.1.2; extra == "docs"
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+ Requires-Dist: sphinx-immaterial<0.12,>=0.11.0; extra == "docs"
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+ Requires-Dist: sphinx-click; extra == "docs"
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+ Provides-Extra: netcdf
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+ Requires-Dist: netCDF4>=1.7.0; extra == "netcdf"
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+ Provides-Extra: h5py
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+ Requires-Dist: h5py; extra == "h5py"
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+ Provides-Extra: test
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+ Requires-Dist: pytest>=5.4.1; extra == "test"
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+ Requires-Dist: pytest-cov>=0.6; extra == "test"
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+ Requires-Dist: pytest-xdist; extra == "test"
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+ Requires-Dist: pytest-randomly; extra == "test"
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+ Requires-Dist: matplotlib; extra == "test"
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+ Requires-Dist: asv==0.6.1; extra == "test"
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+ Requires-Dist: virtualenv; extra == "test"
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+ Requires-Dist: pint; extra == "test"
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+ Requires-Dist: xarray; extra == "test"
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+
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+ # imas-python
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+
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+ imas-python is a pure-python library to handle arbitrarily nested data structures.
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+ imas-python is designed for, but not necessarily bound to, interacting with Interface
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+ Data Structures (IDSs) as defined by the Integrated Modelling & Analysis Suite (IMAS)
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+ Data Model.
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+
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+
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+ ## Install
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+
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+ Install steps are described in the documentation generated from `/docs/source/installing.rst`.
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+
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+ Documentation is autogenerated from the source using [Sphinx](http://sphinx-doc.org/)
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+ and can be found at the [ITER sharepoint](https://sharepoint.iter.org/departments/POP/CM/IMDesign/Code%20Documentation/imas-python-doc/index.html)
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+
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+ The documentation can be manually generated by installing sphinx and running:
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+
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+ ```bash
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+ make -C docs html
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+ ```
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+
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+
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+ ## How to use
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+
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+ ```python
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+ import imas
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+ factory = imas.IDSFactory()
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+ equilibrium = factory.equilibrium()
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+ print(equilibrium)
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+
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+ equilibrium.ids_properties.homogeneous_time = imas.ids_defs.IDS_TIME_MODE_HETEROGENEOUS
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+ equilibrium.ids_properties.comment = "testing"
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+
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+ with imas.DBEntry("imas:hdf5?path=./testdb","w") as dbentry:
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+ dbentry.put(equilibrium)
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+ ```
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+
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+ A quick 5 minutes introduction is available in the documentation generated from `/docs/sources/intro.rst`.
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+
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+
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+ ## Legal
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+
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+ imas-python is Copyright 2020-2024 ITER Organization, Copyright 2020-2023 Karel Lucas van de
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+ Plassche <karelvandeplassche@gmail.com>, Copyright 2020-2022 Daan van Vugt <dvanvugt@ignitioncomputing.com>,
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+ and Copyright 2020 Dutch Institute for Fundamental Energy Research <info@differ.nl>.
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+ It is licensed under [LGPL 3.0](LICENSE.txt).
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+
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+
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+ ## Acknowledgments
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+
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+ Inspired and bootstrapped by existing tools, notably the IMAS Python HLI,
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+ IMAS Python workflows, and OMAS.
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+ imas/_util.py,sha256=FXX13glhmgSiw-0LtjH0xv3YlM3Pa9X4jl9yz9Uv7Vs,9484
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+ imas/_version.py,sha256=QodkfsSL7-uzRIj6hLnnDGcqE3lpslEJyLh0tBIIoMo,425
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+ imas/db_entry.py,sha256=O76bfCfmH3jlZE8eJmnmPiDNqZYpwo3ooQeHOL83mE4,31767
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+ imas/dd_helpers.py,sha256=c1uvR7TvFvOLGUhj1h0PtPMm69CGBjtWrv2AC8FvU2I,10844
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+ imas/dd_zip.py,sha256=Sz2xP-oWyhmmqEN-JGGNizieGZH8CJ6JlCjqN_0fMvw,10330
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+ imas/exception.py,sha256=iqsxl6M1gEjJO8YP9UBYt5OQk7faGx0EIs1XJ4YJ71U,3750
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+ imas/ids_base.py,sha256=zDckve7poXO9vbKPsi_17FjKMTKd6QADork7H7wIS7o,5439
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+ imas/ids_convert.py,sha256=OixW99Gpm77n0wj2RwlasFP_jzAN_wozrlCn_BtkbvM,38548
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+ imas/ids_coordinates.py,sha256=aLrA5XWK5eI6fEeJjLIRtexL5IcNVrq1Uuh_7lPNsSs,16955
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+ imas/ids_data_type.py,sha256=2Kz2FumzgBPH7lEg29qxOxwK9kroUOkLCULZ4tK2kSk,3302
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+ imas/ids_defs.py,sha256=nlVsS5Nw8P838gazBMXUxhzirONKKRq-r60--_Nd9nk,5417
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+ imas/ids_factory.py,sha256=t55O1PB2Nj1vQ1EroC-7dQyB1Va_iSTCCUFINjUKnos,3774
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+ imas/ids_identifiers.py,sha256=YwDjNu7M2kYrEJY5dcOCG0w5OKsWhqzQqCjQzX71HBI,4164
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+ imas/ids_metadata.py,sha256=kpyNKXB9-aQpjdj1df10qKZIJ7-HC5BuDOhGyhX9YMI,12258
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+ imas/ids_path.py,sha256=rqucboH8wO4-njy8d6lUffnfHA6L2b81wh8AJ6Y_gbU,10446
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+ imas/ids_primitive.py,sha256=3s0y0nxPSXjAoXEYUvsmevWOqmfCBnct-ySr_f2oU9k,16810
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+ imas/ids_struct_array.py,sha256=BFBa1wSZFAlZguExCTA56D8RfnaLv-nbxDIz9fMhcGE,8292
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+ imas/ids_structure.py,sha256=IqfPxjAJtDE0aM0sdyEfbvHiD3yIenX7eMsoACi--L4,13155
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+ imas/ids_toplevel.py,sha256=YHWZewK8JYf34pYzF_oooMILZAHgnuWCFtr0_JFjmzI,14915
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+ imas/setup_logging.py,sha256=auFmrFHh1CA6LVQVwo6WWebUIbCpA_7UedQ6G4h5JzM,1874
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+ imas/training.py,sha256=JGYjpCubUJDb_Rg0QaaDhNkBHc4Qc376U9fRq24NVXc,1576
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@@ -0,0 +1,5 @@
1
+ Wheel-Version: 1.0
2
+ Generator: setuptools (75.8.0)
3
+ Root-Is-Purelib: true
4
+ Tag: py3-none-any
5
+
@@ -0,0 +1,3 @@
1
+ [console_scripts]
2
+ build_DD = imas.dd_helpers:prepare_data_dictionaries
3
+ imas = imas.command.cli:cli
@@ -0,0 +1 @@
1
+ imas