genesis-flow 1.0.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (645) hide show
  1. genesis_flow-1.0.0.dist-info/METADATA +822 -0
  2. genesis_flow-1.0.0.dist-info/RECORD +645 -0
  3. genesis_flow-1.0.0.dist-info/WHEEL +5 -0
  4. genesis_flow-1.0.0.dist-info/entry_points.txt +19 -0
  5. genesis_flow-1.0.0.dist-info/licenses/LICENSE.txt +202 -0
  6. genesis_flow-1.0.0.dist-info/top_level.txt +1 -0
  7. mlflow/__init__.py +367 -0
  8. mlflow/__main__.py +3 -0
  9. mlflow/ag2/__init__.py +56 -0
  10. mlflow/ag2/ag2_logger.py +294 -0
  11. mlflow/anthropic/__init__.py +40 -0
  12. mlflow/anthropic/autolog.py +129 -0
  13. mlflow/anthropic/chat.py +144 -0
  14. mlflow/artifacts/__init__.py +268 -0
  15. mlflow/autogen/__init__.py +144 -0
  16. mlflow/autogen/chat.py +142 -0
  17. mlflow/azure/__init__.py +26 -0
  18. mlflow/azure/auth_handler.py +257 -0
  19. mlflow/azure/client.py +319 -0
  20. mlflow/azure/config.py +120 -0
  21. mlflow/azure/connection_factory.py +340 -0
  22. mlflow/azure/exceptions.py +27 -0
  23. mlflow/azure/stores.py +327 -0
  24. mlflow/azure/utils.py +183 -0
  25. mlflow/bedrock/__init__.py +45 -0
  26. mlflow/bedrock/_autolog.py +202 -0
  27. mlflow/bedrock/chat.py +122 -0
  28. mlflow/bedrock/stream.py +160 -0
  29. mlflow/bedrock/utils.py +43 -0
  30. mlflow/cli.py +707 -0
  31. mlflow/client.py +12 -0
  32. mlflow/config/__init__.py +56 -0
  33. mlflow/crewai/__init__.py +79 -0
  34. mlflow/crewai/autolog.py +253 -0
  35. mlflow/crewai/chat.py +29 -0
  36. mlflow/data/__init__.py +75 -0
  37. mlflow/data/artifact_dataset_sources.py +170 -0
  38. mlflow/data/code_dataset_source.py +40 -0
  39. mlflow/data/dataset.py +123 -0
  40. mlflow/data/dataset_registry.py +168 -0
  41. mlflow/data/dataset_source.py +110 -0
  42. mlflow/data/dataset_source_registry.py +219 -0
  43. mlflow/data/delta_dataset_source.py +167 -0
  44. mlflow/data/digest_utils.py +108 -0
  45. mlflow/data/evaluation_dataset.py +562 -0
  46. mlflow/data/filesystem_dataset_source.py +81 -0
  47. mlflow/data/http_dataset_source.py +145 -0
  48. mlflow/data/huggingface_dataset.py +258 -0
  49. mlflow/data/huggingface_dataset_source.py +118 -0
  50. mlflow/data/meta_dataset.py +104 -0
  51. mlflow/data/numpy_dataset.py +223 -0
  52. mlflow/data/pandas_dataset.py +231 -0
  53. mlflow/data/polars_dataset.py +352 -0
  54. mlflow/data/pyfunc_dataset_mixin.py +31 -0
  55. mlflow/data/schema.py +76 -0
  56. mlflow/data/sources.py +1 -0
  57. mlflow/data/spark_dataset.py +406 -0
  58. mlflow/data/spark_dataset_source.py +74 -0
  59. mlflow/data/spark_delta_utils.py +118 -0
  60. mlflow/data/tensorflow_dataset.py +350 -0
  61. mlflow/data/uc_volume_dataset_source.py +81 -0
  62. mlflow/db.py +27 -0
  63. mlflow/dspy/__init__.py +17 -0
  64. mlflow/dspy/autolog.py +197 -0
  65. mlflow/dspy/callback.py +398 -0
  66. mlflow/dspy/constant.py +1 -0
  67. mlflow/dspy/load.py +93 -0
  68. mlflow/dspy/save.py +393 -0
  69. mlflow/dspy/util.py +109 -0
  70. mlflow/dspy/wrapper.py +226 -0
  71. mlflow/entities/__init__.py +104 -0
  72. mlflow/entities/_mlflow_object.py +52 -0
  73. mlflow/entities/assessment.py +545 -0
  74. mlflow/entities/assessment_error.py +80 -0
  75. mlflow/entities/assessment_source.py +141 -0
  76. mlflow/entities/dataset.py +92 -0
  77. mlflow/entities/dataset_input.py +51 -0
  78. mlflow/entities/dataset_summary.py +62 -0
  79. mlflow/entities/document.py +48 -0
  80. mlflow/entities/experiment.py +109 -0
  81. mlflow/entities/experiment_tag.py +35 -0
  82. mlflow/entities/file_info.py +45 -0
  83. mlflow/entities/input_tag.py +35 -0
  84. mlflow/entities/lifecycle_stage.py +35 -0
  85. mlflow/entities/logged_model.py +228 -0
  86. mlflow/entities/logged_model_input.py +26 -0
  87. mlflow/entities/logged_model_output.py +32 -0
  88. mlflow/entities/logged_model_parameter.py +46 -0
  89. mlflow/entities/logged_model_status.py +74 -0
  90. mlflow/entities/logged_model_tag.py +33 -0
  91. mlflow/entities/metric.py +200 -0
  92. mlflow/entities/model_registry/__init__.py +29 -0
  93. mlflow/entities/model_registry/_model_registry_entity.py +13 -0
  94. mlflow/entities/model_registry/model_version.py +243 -0
  95. mlflow/entities/model_registry/model_version_deployment_job_run_state.py +44 -0
  96. mlflow/entities/model_registry/model_version_deployment_job_state.py +70 -0
  97. mlflow/entities/model_registry/model_version_search.py +25 -0
  98. mlflow/entities/model_registry/model_version_stages.py +25 -0
  99. mlflow/entities/model_registry/model_version_status.py +35 -0
  100. mlflow/entities/model_registry/model_version_tag.py +35 -0
  101. mlflow/entities/model_registry/prompt.py +73 -0
  102. mlflow/entities/model_registry/prompt_version.py +244 -0
  103. mlflow/entities/model_registry/registered_model.py +175 -0
  104. mlflow/entities/model_registry/registered_model_alias.py +35 -0
  105. mlflow/entities/model_registry/registered_model_deployment_job_state.py +39 -0
  106. mlflow/entities/model_registry/registered_model_search.py +25 -0
  107. mlflow/entities/model_registry/registered_model_tag.py +35 -0
  108. mlflow/entities/multipart_upload.py +74 -0
  109. mlflow/entities/param.py +49 -0
  110. mlflow/entities/run.py +97 -0
  111. mlflow/entities/run_data.py +84 -0
  112. mlflow/entities/run_info.py +188 -0
  113. mlflow/entities/run_inputs.py +59 -0
  114. mlflow/entities/run_outputs.py +43 -0
  115. mlflow/entities/run_status.py +41 -0
  116. mlflow/entities/run_tag.py +36 -0
  117. mlflow/entities/source_type.py +31 -0
  118. mlflow/entities/span.py +774 -0
  119. mlflow/entities/span_event.py +96 -0
  120. mlflow/entities/span_status.py +102 -0
  121. mlflow/entities/trace.py +317 -0
  122. mlflow/entities/trace_data.py +71 -0
  123. mlflow/entities/trace_info.py +220 -0
  124. mlflow/entities/trace_info_v2.py +162 -0
  125. mlflow/entities/trace_location.py +173 -0
  126. mlflow/entities/trace_state.py +39 -0
  127. mlflow/entities/trace_status.py +68 -0
  128. mlflow/entities/view_type.py +51 -0
  129. mlflow/environment_variables.py +866 -0
  130. mlflow/evaluation/__init__.py +16 -0
  131. mlflow/evaluation/assessment.py +369 -0
  132. mlflow/evaluation/evaluation.py +411 -0
  133. mlflow/evaluation/evaluation_tag.py +61 -0
  134. mlflow/evaluation/fluent.py +48 -0
  135. mlflow/evaluation/utils.py +201 -0
  136. mlflow/exceptions.py +213 -0
  137. mlflow/experiments.py +140 -0
  138. mlflow/gemini/__init__.py +81 -0
  139. mlflow/gemini/autolog.py +186 -0
  140. mlflow/gemini/chat.py +261 -0
  141. mlflow/genai/__init__.py +71 -0
  142. mlflow/genai/datasets/__init__.py +67 -0
  143. mlflow/genai/datasets/evaluation_dataset.py +131 -0
  144. mlflow/genai/evaluation/__init__.py +3 -0
  145. mlflow/genai/evaluation/base.py +411 -0
  146. mlflow/genai/evaluation/constant.py +23 -0
  147. mlflow/genai/evaluation/utils.py +244 -0
  148. mlflow/genai/judges/__init__.py +21 -0
  149. mlflow/genai/judges/databricks.py +404 -0
  150. mlflow/genai/label_schemas/__init__.py +153 -0
  151. mlflow/genai/label_schemas/label_schemas.py +209 -0
  152. mlflow/genai/labeling/__init__.py +159 -0
  153. mlflow/genai/labeling/labeling.py +250 -0
  154. mlflow/genai/optimize/__init__.py +13 -0
  155. mlflow/genai/optimize/base.py +198 -0
  156. mlflow/genai/optimize/optimizers/__init__.py +4 -0
  157. mlflow/genai/optimize/optimizers/base_optimizer.py +38 -0
  158. mlflow/genai/optimize/optimizers/dspy_mipro_optimizer.py +221 -0
  159. mlflow/genai/optimize/optimizers/dspy_optimizer.py +91 -0
  160. mlflow/genai/optimize/optimizers/utils/dspy_mipro_callback.py +76 -0
  161. mlflow/genai/optimize/optimizers/utils/dspy_mipro_utils.py +18 -0
  162. mlflow/genai/optimize/types.py +75 -0
  163. mlflow/genai/optimize/util.py +30 -0
  164. mlflow/genai/prompts/__init__.py +206 -0
  165. mlflow/genai/scheduled_scorers.py +431 -0
  166. mlflow/genai/scorers/__init__.py +26 -0
  167. mlflow/genai/scorers/base.py +492 -0
  168. mlflow/genai/scorers/builtin_scorers.py +765 -0
  169. mlflow/genai/scorers/scorer_utils.py +138 -0
  170. mlflow/genai/scorers/validation.py +165 -0
  171. mlflow/genai/utils/data_validation.py +146 -0
  172. mlflow/genai/utils/enum_utils.py +23 -0
  173. mlflow/genai/utils/trace_utils.py +211 -0
  174. mlflow/groq/__init__.py +42 -0
  175. mlflow/groq/_groq_autolog.py +74 -0
  176. mlflow/johnsnowlabs/__init__.py +888 -0
  177. mlflow/langchain/__init__.py +24 -0
  178. mlflow/langchain/api_request_parallel_processor.py +330 -0
  179. mlflow/langchain/autolog.py +147 -0
  180. mlflow/langchain/chat_agent_langgraph.py +340 -0
  181. mlflow/langchain/constant.py +1 -0
  182. mlflow/langchain/constants.py +1 -0
  183. mlflow/langchain/databricks_dependencies.py +444 -0
  184. mlflow/langchain/langchain_tracer.py +597 -0
  185. mlflow/langchain/model.py +919 -0
  186. mlflow/langchain/output_parsers.py +142 -0
  187. mlflow/langchain/retriever_chain.py +153 -0
  188. mlflow/langchain/runnables.py +527 -0
  189. mlflow/langchain/utils/chat.py +402 -0
  190. mlflow/langchain/utils/logging.py +671 -0
  191. mlflow/langchain/utils/serialization.py +36 -0
  192. mlflow/legacy_databricks_cli/__init__.py +0 -0
  193. mlflow/legacy_databricks_cli/configure/__init__.py +0 -0
  194. mlflow/legacy_databricks_cli/configure/provider.py +482 -0
  195. mlflow/litellm/__init__.py +175 -0
  196. mlflow/llama_index/__init__.py +22 -0
  197. mlflow/llama_index/autolog.py +55 -0
  198. mlflow/llama_index/chat.py +43 -0
  199. mlflow/llama_index/constant.py +1 -0
  200. mlflow/llama_index/model.py +577 -0
  201. mlflow/llama_index/pyfunc_wrapper.py +332 -0
  202. mlflow/llama_index/serialize_objects.py +188 -0
  203. mlflow/llama_index/tracer.py +561 -0
  204. mlflow/metrics/__init__.py +479 -0
  205. mlflow/metrics/base.py +39 -0
  206. mlflow/metrics/genai/__init__.py +25 -0
  207. mlflow/metrics/genai/base.py +101 -0
  208. mlflow/metrics/genai/genai_metric.py +771 -0
  209. mlflow/metrics/genai/metric_definitions.py +450 -0
  210. mlflow/metrics/genai/model_utils.py +371 -0
  211. mlflow/metrics/genai/prompt_template.py +68 -0
  212. mlflow/metrics/genai/prompts/__init__.py +0 -0
  213. mlflow/metrics/genai/prompts/v1.py +422 -0
  214. mlflow/metrics/genai/utils.py +6 -0
  215. mlflow/metrics/metric_definitions.py +619 -0
  216. mlflow/mismatch.py +34 -0
  217. mlflow/mistral/__init__.py +34 -0
  218. mlflow/mistral/autolog.py +71 -0
  219. mlflow/mistral/chat.py +135 -0
  220. mlflow/ml_package_versions.py +452 -0
  221. mlflow/models/__init__.py +97 -0
  222. mlflow/models/auth_policy.py +83 -0
  223. mlflow/models/cli.py +354 -0
  224. mlflow/models/container/__init__.py +294 -0
  225. mlflow/models/container/scoring_server/__init__.py +0 -0
  226. mlflow/models/container/scoring_server/nginx.conf +39 -0
  227. mlflow/models/dependencies_schemas.py +287 -0
  228. mlflow/models/display_utils.py +158 -0
  229. mlflow/models/docker_utils.py +211 -0
  230. mlflow/models/evaluation/__init__.py +23 -0
  231. mlflow/models/evaluation/_shap_patch.py +64 -0
  232. mlflow/models/evaluation/artifacts.py +194 -0
  233. mlflow/models/evaluation/base.py +1811 -0
  234. mlflow/models/evaluation/calibration_curve.py +109 -0
  235. mlflow/models/evaluation/default_evaluator.py +996 -0
  236. mlflow/models/evaluation/deprecated.py +23 -0
  237. mlflow/models/evaluation/evaluator_registry.py +80 -0
  238. mlflow/models/evaluation/evaluators/classifier.py +704 -0
  239. mlflow/models/evaluation/evaluators/default.py +233 -0
  240. mlflow/models/evaluation/evaluators/regressor.py +96 -0
  241. mlflow/models/evaluation/evaluators/shap.py +296 -0
  242. mlflow/models/evaluation/lift_curve.py +178 -0
  243. mlflow/models/evaluation/utils/metric.py +123 -0
  244. mlflow/models/evaluation/utils/trace.py +179 -0
  245. mlflow/models/evaluation/validation.py +434 -0
  246. mlflow/models/flavor_backend.py +93 -0
  247. mlflow/models/flavor_backend_registry.py +53 -0
  248. mlflow/models/model.py +1639 -0
  249. mlflow/models/model_config.py +150 -0
  250. mlflow/models/notebook_resources/agent_evaluation_template.html +235 -0
  251. mlflow/models/notebook_resources/eval_with_dataset_example.py +22 -0
  252. mlflow/models/notebook_resources/eval_with_synthetic_example.py +22 -0
  253. mlflow/models/python_api.py +369 -0
  254. mlflow/models/rag_signatures.py +128 -0
  255. mlflow/models/resources.py +321 -0
  256. mlflow/models/signature.py +662 -0
  257. mlflow/models/utils.py +2054 -0
  258. mlflow/models/wheeled_model.py +280 -0
  259. mlflow/openai/__init__.py +57 -0
  260. mlflow/openai/_agent_tracer.py +364 -0
  261. mlflow/openai/api_request_parallel_processor.py +131 -0
  262. mlflow/openai/autolog.py +509 -0
  263. mlflow/openai/constant.py +1 -0
  264. mlflow/openai/model.py +824 -0
  265. mlflow/openai/utils/chat_schema.py +367 -0
  266. mlflow/optuna/__init__.py +3 -0
  267. mlflow/optuna/storage.py +646 -0
  268. mlflow/plugins/__init__.py +72 -0
  269. mlflow/plugins/base.py +358 -0
  270. mlflow/plugins/builtin/__init__.py +24 -0
  271. mlflow/plugins/builtin/pytorch_plugin.py +150 -0
  272. mlflow/plugins/builtin/sklearn_plugin.py +158 -0
  273. mlflow/plugins/builtin/transformers_plugin.py +187 -0
  274. mlflow/plugins/cli.py +321 -0
  275. mlflow/plugins/discovery.py +340 -0
  276. mlflow/plugins/manager.py +465 -0
  277. mlflow/plugins/registry.py +316 -0
  278. mlflow/plugins/templates/framework_plugin_template.py +329 -0
  279. mlflow/prompt/constants.py +20 -0
  280. mlflow/prompt/promptlab_model.py +197 -0
  281. mlflow/prompt/registry_utils.py +248 -0
  282. mlflow/promptflow/__init__.py +495 -0
  283. mlflow/protos/__init__.py +0 -0
  284. mlflow/protos/assessments_pb2.py +174 -0
  285. mlflow/protos/databricks_artifacts_pb2.py +489 -0
  286. mlflow/protos/databricks_filesystem_service_pb2.py +196 -0
  287. mlflow/protos/databricks_managed_catalog_messages_pb2.py +95 -0
  288. mlflow/protos/databricks_managed_catalog_service_pb2.py +86 -0
  289. mlflow/protos/databricks_pb2.py +267 -0
  290. mlflow/protos/databricks_trace_server_pb2.py +374 -0
  291. mlflow/protos/databricks_uc_registry_messages_pb2.py +1249 -0
  292. mlflow/protos/databricks_uc_registry_service_pb2.py +170 -0
  293. mlflow/protos/facet_feature_statistics_pb2.py +296 -0
  294. mlflow/protos/internal_pb2.py +77 -0
  295. mlflow/protos/mlflow_artifacts_pb2.py +336 -0
  296. mlflow/protos/model_registry_pb2.py +1073 -0
  297. mlflow/protos/scalapb/__init__.py +0 -0
  298. mlflow/protos/scalapb/scalapb_pb2.py +104 -0
  299. mlflow/protos/service_pb2.py +2600 -0
  300. mlflow/protos/unity_catalog_oss_messages_pb2.py +457 -0
  301. mlflow/protos/unity_catalog_oss_service_pb2.py +130 -0
  302. mlflow/protos/unity_catalog_prompt_messages_pb2.py +447 -0
  303. mlflow/protos/unity_catalog_prompt_messages_pb2_grpc.py +24 -0
  304. mlflow/protos/unity_catalog_prompt_service_pb2.py +164 -0
  305. mlflow/protos/unity_catalog_prompt_service_pb2_grpc.py +785 -0
  306. mlflow/py.typed +0 -0
  307. mlflow/pydantic_ai/__init__.py +57 -0
  308. mlflow/pydantic_ai/autolog.py +173 -0
  309. mlflow/pyfunc/__init__.py +3844 -0
  310. mlflow/pyfunc/_mlflow_pyfunc_backend_predict.py +61 -0
  311. mlflow/pyfunc/backend.py +523 -0
  312. mlflow/pyfunc/context.py +78 -0
  313. mlflow/pyfunc/dbconnect_artifact_cache.py +144 -0
  314. mlflow/pyfunc/loaders/__init__.py +7 -0
  315. mlflow/pyfunc/loaders/chat_agent.py +117 -0
  316. mlflow/pyfunc/loaders/chat_model.py +125 -0
  317. mlflow/pyfunc/loaders/code_model.py +31 -0
  318. mlflow/pyfunc/loaders/responses_agent.py +112 -0
  319. mlflow/pyfunc/mlserver.py +46 -0
  320. mlflow/pyfunc/model.py +1473 -0
  321. mlflow/pyfunc/scoring_server/__init__.py +604 -0
  322. mlflow/pyfunc/scoring_server/app.py +7 -0
  323. mlflow/pyfunc/scoring_server/client.py +146 -0
  324. mlflow/pyfunc/spark_model_cache.py +48 -0
  325. mlflow/pyfunc/stdin_server.py +44 -0
  326. mlflow/pyfunc/utils/__init__.py +3 -0
  327. mlflow/pyfunc/utils/data_validation.py +224 -0
  328. mlflow/pyfunc/utils/environment.py +22 -0
  329. mlflow/pyfunc/utils/input_converter.py +47 -0
  330. mlflow/pyfunc/utils/serving_data_parser.py +11 -0
  331. mlflow/pytorch/__init__.py +1171 -0
  332. mlflow/pytorch/_lightning_autolog.py +580 -0
  333. mlflow/pytorch/_pytorch_autolog.py +50 -0
  334. mlflow/pytorch/pickle_module.py +35 -0
  335. mlflow/rfunc/__init__.py +42 -0
  336. mlflow/rfunc/backend.py +134 -0
  337. mlflow/runs.py +89 -0
  338. mlflow/server/__init__.py +302 -0
  339. mlflow/server/auth/__init__.py +1224 -0
  340. mlflow/server/auth/__main__.py +4 -0
  341. mlflow/server/auth/basic_auth.ini +6 -0
  342. mlflow/server/auth/cli.py +11 -0
  343. mlflow/server/auth/client.py +537 -0
  344. mlflow/server/auth/config.py +34 -0
  345. mlflow/server/auth/db/__init__.py +0 -0
  346. mlflow/server/auth/db/cli.py +18 -0
  347. mlflow/server/auth/db/migrations/__init__.py +0 -0
  348. mlflow/server/auth/db/migrations/alembic.ini +110 -0
  349. mlflow/server/auth/db/migrations/env.py +76 -0
  350. mlflow/server/auth/db/migrations/versions/8606fa83a998_initial_migration.py +51 -0
  351. mlflow/server/auth/db/migrations/versions/__init__.py +0 -0
  352. mlflow/server/auth/db/models.py +67 -0
  353. mlflow/server/auth/db/utils.py +37 -0
  354. mlflow/server/auth/entities.py +165 -0
  355. mlflow/server/auth/logo.py +14 -0
  356. mlflow/server/auth/permissions.py +65 -0
  357. mlflow/server/auth/routes.py +18 -0
  358. mlflow/server/auth/sqlalchemy_store.py +263 -0
  359. mlflow/server/graphql/__init__.py +0 -0
  360. mlflow/server/graphql/autogenerated_graphql_schema.py +353 -0
  361. mlflow/server/graphql/graphql_custom_scalars.py +24 -0
  362. mlflow/server/graphql/graphql_errors.py +15 -0
  363. mlflow/server/graphql/graphql_no_batching.py +89 -0
  364. mlflow/server/graphql/graphql_schema_extensions.py +74 -0
  365. mlflow/server/handlers.py +3217 -0
  366. mlflow/server/prometheus_exporter.py +17 -0
  367. mlflow/server/validation.py +30 -0
  368. mlflow/shap/__init__.py +691 -0
  369. mlflow/sklearn/__init__.py +1994 -0
  370. mlflow/sklearn/utils.py +1041 -0
  371. mlflow/smolagents/__init__.py +66 -0
  372. mlflow/smolagents/autolog.py +139 -0
  373. mlflow/smolagents/chat.py +29 -0
  374. mlflow/store/__init__.py +10 -0
  375. mlflow/store/_unity_catalog/__init__.py +1 -0
  376. mlflow/store/_unity_catalog/lineage/__init__.py +1 -0
  377. mlflow/store/_unity_catalog/lineage/constants.py +2 -0
  378. mlflow/store/_unity_catalog/registry/__init__.py +6 -0
  379. mlflow/store/_unity_catalog/registry/prompt_info.py +75 -0
  380. mlflow/store/_unity_catalog/registry/rest_store.py +1740 -0
  381. mlflow/store/_unity_catalog/registry/uc_oss_rest_store.py +507 -0
  382. mlflow/store/_unity_catalog/registry/utils.py +121 -0
  383. mlflow/store/artifact/__init__.py +0 -0
  384. mlflow/store/artifact/artifact_repo.py +472 -0
  385. mlflow/store/artifact/artifact_repository_registry.py +154 -0
  386. mlflow/store/artifact/azure_blob_artifact_repo.py +275 -0
  387. mlflow/store/artifact/azure_data_lake_artifact_repo.py +295 -0
  388. mlflow/store/artifact/cli.py +141 -0
  389. mlflow/store/artifact/cloud_artifact_repo.py +332 -0
  390. mlflow/store/artifact/databricks_artifact_repo.py +729 -0
  391. mlflow/store/artifact/databricks_artifact_repo_resources.py +301 -0
  392. mlflow/store/artifact/databricks_logged_model_artifact_repo.py +93 -0
  393. mlflow/store/artifact/databricks_models_artifact_repo.py +216 -0
  394. mlflow/store/artifact/databricks_sdk_artifact_repo.py +134 -0
  395. mlflow/store/artifact/databricks_sdk_models_artifact_repo.py +97 -0
  396. mlflow/store/artifact/dbfs_artifact_repo.py +240 -0
  397. mlflow/store/artifact/ftp_artifact_repo.py +132 -0
  398. mlflow/store/artifact/gcs_artifact_repo.py +296 -0
  399. mlflow/store/artifact/hdfs_artifact_repo.py +209 -0
  400. mlflow/store/artifact/http_artifact_repo.py +218 -0
  401. mlflow/store/artifact/local_artifact_repo.py +142 -0
  402. mlflow/store/artifact/mlflow_artifacts_repo.py +94 -0
  403. mlflow/store/artifact/models_artifact_repo.py +259 -0
  404. mlflow/store/artifact/optimized_s3_artifact_repo.py +356 -0
  405. mlflow/store/artifact/presigned_url_artifact_repo.py +173 -0
  406. mlflow/store/artifact/r2_artifact_repo.py +70 -0
  407. mlflow/store/artifact/runs_artifact_repo.py +265 -0
  408. mlflow/store/artifact/s3_artifact_repo.py +330 -0
  409. mlflow/store/artifact/sftp_artifact_repo.py +141 -0
  410. mlflow/store/artifact/uc_volume_artifact_repo.py +76 -0
  411. mlflow/store/artifact/unity_catalog_models_artifact_repo.py +168 -0
  412. mlflow/store/artifact/unity_catalog_oss_models_artifact_repo.py +168 -0
  413. mlflow/store/artifact/utils/__init__.py +0 -0
  414. mlflow/store/artifact/utils/models.py +148 -0
  415. mlflow/store/db/__init__.py +0 -0
  416. mlflow/store/db/base_sql_model.py +3 -0
  417. mlflow/store/db/db_types.py +10 -0
  418. mlflow/store/db/utils.py +314 -0
  419. mlflow/store/db_migrations/__init__.py +0 -0
  420. mlflow/store/db_migrations/alembic.ini +74 -0
  421. mlflow/store/db_migrations/env.py +84 -0
  422. mlflow/store/db_migrations/versions/0584bdc529eb_add_cascading_deletion_to_datasets_from_experiments.py +88 -0
  423. mlflow/store/db_migrations/versions/0a8213491aaa_drop_duplicate_killed_constraint.py +49 -0
  424. mlflow/store/db_migrations/versions/0c779009ac13_add_deleted_time_field_to_runs_table.py +24 -0
  425. mlflow/store/db_migrations/versions/181f10493468_allow_nulls_for_metric_values.py +35 -0
  426. mlflow/store/db_migrations/versions/27a6a02d2cf1_add_model_version_tags_table.py +38 -0
  427. mlflow/store/db_migrations/versions/2b4d017a5e9b_add_model_registry_tables_to_db.py +77 -0
  428. mlflow/store/db_migrations/versions/2d6e25af4d3e_increase_max_param_val_length.py +33 -0
  429. mlflow/store/db_migrations/versions/3500859a5d39_add_model_aliases_table.py +50 -0
  430. mlflow/store/db_migrations/versions/39d1c3be5f05_add_is_nan_constraint_for_metrics_tables_if_necessary.py +41 -0
  431. mlflow/store/db_migrations/versions/400f98739977_add_logged_model_tables.py +123 -0
  432. mlflow/store/db_migrations/versions/4465047574b1_increase_max_dataset_schema_size.py +38 -0
  433. mlflow/store/db_migrations/versions/451aebb31d03_add_metric_step.py +35 -0
  434. mlflow/store/db_migrations/versions/5b0e9adcef9c_add_cascade_deletion_to_trace_tables_fk.py +40 -0
  435. mlflow/store/db_migrations/versions/6953534de441_add_step_to_inputs_table.py +25 -0
  436. mlflow/store/db_migrations/versions/728d730b5ebd_add_registered_model_tags_table.py +38 -0
  437. mlflow/store/db_migrations/versions/7ac759974ad8_update_run_tags_with_larger_limit.py +36 -0
  438. mlflow/store/db_migrations/versions/7f2a7d5fae7d_add_datasets_inputs_input_tags_tables.py +82 -0
  439. mlflow/store/db_migrations/versions/84291f40a231_add_run_link_to_model_version.py +26 -0
  440. mlflow/store/db_migrations/versions/867495a8f9d4_add_trace_tables.py +90 -0
  441. mlflow/store/db_migrations/versions/89d4b8295536_create_latest_metrics_table.py +169 -0
  442. mlflow/store/db_migrations/versions/90e64c465722_migrate_user_column_to_tags.py +64 -0
  443. mlflow/store/db_migrations/versions/97727af70f4d_creation_time_last_update_time_experiments.py +25 -0
  444. mlflow/store/db_migrations/versions/__init__.py +0 -0
  445. mlflow/store/db_migrations/versions/a8c4a736bde6_allow_nulls_for_run_id.py +27 -0
  446. mlflow/store/db_migrations/versions/acf3f17fdcc7_add_storage_location_field_to_model_.py +29 -0
  447. mlflow/store/db_migrations/versions/bd07f7e963c5_create_index_on_run_uuid.py +26 -0
  448. mlflow/store/db_migrations/versions/bda7b8c39065_increase_model_version_tag_value_limit.py +38 -0
  449. mlflow/store/db_migrations/versions/c48cb773bb87_reset_default_value_for_is_nan_in_metrics_table_for_mysql.py +41 -0
  450. mlflow/store/db_migrations/versions/cbc13b556ace_add_v3_trace_schema_columns.py +31 -0
  451. mlflow/store/db_migrations/versions/cc1f77228345_change_param_value_length_to_500.py +34 -0
  452. mlflow/store/db_migrations/versions/cfd24bdc0731_update_run_status_constraint_with_killed.py +78 -0
  453. mlflow/store/db_migrations/versions/df50e92ffc5e_add_experiment_tags_table.py +38 -0
  454. mlflow/store/db_migrations/versions/f5a4f2784254_increase_run_tag_value_limit.py +36 -0
  455. mlflow/store/entities/__init__.py +3 -0
  456. mlflow/store/entities/paged_list.py +18 -0
  457. mlflow/store/model_registry/__init__.py +10 -0
  458. mlflow/store/model_registry/abstract_store.py +1081 -0
  459. mlflow/store/model_registry/base_rest_store.py +44 -0
  460. mlflow/store/model_registry/databricks_workspace_model_registry_rest_store.py +37 -0
  461. mlflow/store/model_registry/dbmodels/__init__.py +0 -0
  462. mlflow/store/model_registry/dbmodels/models.py +206 -0
  463. mlflow/store/model_registry/file_store.py +1091 -0
  464. mlflow/store/model_registry/rest_store.py +481 -0
  465. mlflow/store/model_registry/sqlalchemy_store.py +1286 -0
  466. mlflow/store/tracking/__init__.py +23 -0
  467. mlflow/store/tracking/abstract_store.py +816 -0
  468. mlflow/store/tracking/dbmodels/__init__.py +0 -0
  469. mlflow/store/tracking/dbmodels/initial_models.py +243 -0
  470. mlflow/store/tracking/dbmodels/models.py +1073 -0
  471. mlflow/store/tracking/file_store.py +2438 -0
  472. mlflow/store/tracking/postgres_managed_identity.py +146 -0
  473. mlflow/store/tracking/rest_store.py +1131 -0
  474. mlflow/store/tracking/sqlalchemy_store.py +2785 -0
  475. mlflow/system_metrics/__init__.py +61 -0
  476. mlflow/system_metrics/metrics/__init__.py +0 -0
  477. mlflow/system_metrics/metrics/base_metrics_monitor.py +32 -0
  478. mlflow/system_metrics/metrics/cpu_monitor.py +23 -0
  479. mlflow/system_metrics/metrics/disk_monitor.py +21 -0
  480. mlflow/system_metrics/metrics/gpu_monitor.py +71 -0
  481. mlflow/system_metrics/metrics/network_monitor.py +34 -0
  482. mlflow/system_metrics/metrics/rocm_monitor.py +123 -0
  483. mlflow/system_metrics/system_metrics_monitor.py +198 -0
  484. mlflow/tracing/__init__.py +16 -0
  485. mlflow/tracing/assessment.py +356 -0
  486. mlflow/tracing/client.py +531 -0
  487. mlflow/tracing/config.py +125 -0
  488. mlflow/tracing/constant.py +105 -0
  489. mlflow/tracing/destination.py +81 -0
  490. mlflow/tracing/display/__init__.py +40 -0
  491. mlflow/tracing/display/display_handler.py +196 -0
  492. mlflow/tracing/export/async_export_queue.py +186 -0
  493. mlflow/tracing/export/inference_table.py +138 -0
  494. mlflow/tracing/export/mlflow_v3.py +137 -0
  495. mlflow/tracing/export/utils.py +70 -0
  496. mlflow/tracing/fluent.py +1417 -0
  497. mlflow/tracing/processor/base_mlflow.py +199 -0
  498. mlflow/tracing/processor/inference_table.py +175 -0
  499. mlflow/tracing/processor/mlflow_v3.py +47 -0
  500. mlflow/tracing/processor/otel.py +73 -0
  501. mlflow/tracing/provider.py +487 -0
  502. mlflow/tracing/trace_manager.py +200 -0
  503. mlflow/tracing/utils/__init__.py +616 -0
  504. mlflow/tracing/utils/artifact_utils.py +28 -0
  505. mlflow/tracing/utils/copy.py +55 -0
  506. mlflow/tracing/utils/environment.py +55 -0
  507. mlflow/tracing/utils/exception.py +21 -0
  508. mlflow/tracing/utils/once.py +35 -0
  509. mlflow/tracing/utils/otlp.py +63 -0
  510. mlflow/tracing/utils/processor.py +54 -0
  511. mlflow/tracing/utils/search.py +292 -0
  512. mlflow/tracing/utils/timeout.py +250 -0
  513. mlflow/tracing/utils/token.py +19 -0
  514. mlflow/tracing/utils/truncation.py +124 -0
  515. mlflow/tracing/utils/warning.py +76 -0
  516. mlflow/tracking/__init__.py +39 -0
  517. mlflow/tracking/_model_registry/__init__.py +1 -0
  518. mlflow/tracking/_model_registry/client.py +764 -0
  519. mlflow/tracking/_model_registry/fluent.py +853 -0
  520. mlflow/tracking/_model_registry/registry.py +67 -0
  521. mlflow/tracking/_model_registry/utils.py +251 -0
  522. mlflow/tracking/_tracking_service/__init__.py +0 -0
  523. mlflow/tracking/_tracking_service/client.py +883 -0
  524. mlflow/tracking/_tracking_service/registry.py +56 -0
  525. mlflow/tracking/_tracking_service/utils.py +275 -0
  526. mlflow/tracking/artifact_utils.py +179 -0
  527. mlflow/tracking/client.py +5900 -0
  528. mlflow/tracking/context/__init__.py +0 -0
  529. mlflow/tracking/context/abstract_context.py +35 -0
  530. mlflow/tracking/context/databricks_cluster_context.py +15 -0
  531. mlflow/tracking/context/databricks_command_context.py +15 -0
  532. mlflow/tracking/context/databricks_job_context.py +49 -0
  533. mlflow/tracking/context/databricks_notebook_context.py +41 -0
  534. mlflow/tracking/context/databricks_repo_context.py +43 -0
  535. mlflow/tracking/context/default_context.py +51 -0
  536. mlflow/tracking/context/git_context.py +32 -0
  537. mlflow/tracking/context/registry.py +98 -0
  538. mlflow/tracking/context/system_environment_context.py +15 -0
  539. mlflow/tracking/default_experiment/__init__.py +1 -0
  540. mlflow/tracking/default_experiment/abstract_context.py +43 -0
  541. mlflow/tracking/default_experiment/databricks_notebook_experiment_provider.py +44 -0
  542. mlflow/tracking/default_experiment/registry.py +75 -0
  543. mlflow/tracking/fluent.py +3595 -0
  544. mlflow/tracking/metric_value_conversion_utils.py +93 -0
  545. mlflow/tracking/multimedia.py +206 -0
  546. mlflow/tracking/registry.py +86 -0
  547. mlflow/tracking/request_auth/__init__.py +0 -0
  548. mlflow/tracking/request_auth/abstract_request_auth_provider.py +34 -0
  549. mlflow/tracking/request_auth/registry.py +60 -0
  550. mlflow/tracking/request_header/__init__.py +0 -0
  551. mlflow/tracking/request_header/abstract_request_header_provider.py +36 -0
  552. mlflow/tracking/request_header/databricks_request_header_provider.py +38 -0
  553. mlflow/tracking/request_header/default_request_header_provider.py +17 -0
  554. mlflow/tracking/request_header/registry.py +79 -0
  555. mlflow/transformers/__init__.py +2982 -0
  556. mlflow/transformers/flavor_config.py +258 -0
  557. mlflow/transformers/hub_utils.py +83 -0
  558. mlflow/transformers/llm_inference_utils.py +468 -0
  559. mlflow/transformers/model_io.py +301 -0
  560. mlflow/transformers/peft.py +51 -0
  561. mlflow/transformers/signature.py +183 -0
  562. mlflow/transformers/torch_utils.py +55 -0
  563. mlflow/types/__init__.py +21 -0
  564. mlflow/types/agent.py +270 -0
  565. mlflow/types/chat.py +240 -0
  566. mlflow/types/llm.py +935 -0
  567. mlflow/types/responses.py +139 -0
  568. mlflow/types/responses_helpers.py +416 -0
  569. mlflow/types/schema.py +1505 -0
  570. mlflow/types/type_hints.py +647 -0
  571. mlflow/types/utils.py +753 -0
  572. mlflow/utils/__init__.py +283 -0
  573. mlflow/utils/_capture_modules.py +256 -0
  574. mlflow/utils/_capture_transformers_modules.py +75 -0
  575. mlflow/utils/_spark_utils.py +201 -0
  576. mlflow/utils/_unity_catalog_oss_utils.py +97 -0
  577. mlflow/utils/_unity_catalog_utils.py +479 -0
  578. mlflow/utils/annotations.py +218 -0
  579. mlflow/utils/arguments_utils.py +16 -0
  580. mlflow/utils/async_logging/__init__.py +1 -0
  581. mlflow/utils/async_logging/async_artifacts_logging_queue.py +258 -0
  582. mlflow/utils/async_logging/async_logging_queue.py +366 -0
  583. mlflow/utils/async_logging/run_artifact.py +38 -0
  584. mlflow/utils/async_logging/run_batch.py +58 -0
  585. mlflow/utils/async_logging/run_operations.py +49 -0
  586. mlflow/utils/autologging_utils/__init__.py +737 -0
  587. mlflow/utils/autologging_utils/client.py +432 -0
  588. mlflow/utils/autologging_utils/config.py +33 -0
  589. mlflow/utils/autologging_utils/events.py +294 -0
  590. mlflow/utils/autologging_utils/logging_and_warnings.py +328 -0
  591. mlflow/utils/autologging_utils/metrics_queue.py +71 -0
  592. mlflow/utils/autologging_utils/safety.py +1104 -0
  593. mlflow/utils/autologging_utils/versioning.py +95 -0
  594. mlflow/utils/checkpoint_utils.py +206 -0
  595. mlflow/utils/class_utils.py +6 -0
  596. mlflow/utils/cli_args.py +257 -0
  597. mlflow/utils/conda.py +354 -0
  598. mlflow/utils/credentials.py +231 -0
  599. mlflow/utils/data_utils.py +17 -0
  600. mlflow/utils/databricks_utils.py +1436 -0
  601. mlflow/utils/docstring_utils.py +477 -0
  602. mlflow/utils/doctor.py +133 -0
  603. mlflow/utils/download_cloud_file_chunk.py +43 -0
  604. mlflow/utils/env_manager.py +16 -0
  605. mlflow/utils/env_pack.py +131 -0
  606. mlflow/utils/environment.py +1009 -0
  607. mlflow/utils/exception_utils.py +14 -0
  608. mlflow/utils/file_utils.py +978 -0
  609. mlflow/utils/git_utils.py +77 -0
  610. mlflow/utils/gorilla.py +797 -0
  611. mlflow/utils/import_hooks/__init__.py +363 -0
  612. mlflow/utils/lazy_load.py +51 -0
  613. mlflow/utils/logging_utils.py +168 -0
  614. mlflow/utils/mime_type_utils.py +58 -0
  615. mlflow/utils/mlflow_tags.py +103 -0
  616. mlflow/utils/model_utils.py +486 -0
  617. mlflow/utils/name_utils.py +346 -0
  618. mlflow/utils/nfs_on_spark.py +62 -0
  619. mlflow/utils/openai_utils.py +164 -0
  620. mlflow/utils/os.py +12 -0
  621. mlflow/utils/oss_registry_utils.py +29 -0
  622. mlflow/utils/plugins.py +17 -0
  623. mlflow/utils/process.py +182 -0
  624. mlflow/utils/promptlab_utils.py +146 -0
  625. mlflow/utils/proto_json_utils.py +743 -0
  626. mlflow/utils/pydantic_utils.py +54 -0
  627. mlflow/utils/request_utils.py +279 -0
  628. mlflow/utils/requirements_utils.py +704 -0
  629. mlflow/utils/rest_utils.py +673 -0
  630. mlflow/utils/search_logged_model_utils.py +127 -0
  631. mlflow/utils/search_utils.py +2111 -0
  632. mlflow/utils/secure_loading.py +221 -0
  633. mlflow/utils/security_validation.py +384 -0
  634. mlflow/utils/server_cli_utils.py +61 -0
  635. mlflow/utils/spark_utils.py +15 -0
  636. mlflow/utils/string_utils.py +138 -0
  637. mlflow/utils/thread_utils.py +63 -0
  638. mlflow/utils/time.py +54 -0
  639. mlflow/utils/timeout.py +42 -0
  640. mlflow/utils/uri.py +572 -0
  641. mlflow/utils/validation.py +662 -0
  642. mlflow/utils/virtualenv.py +458 -0
  643. mlflow/utils/warnings_utils.py +25 -0
  644. mlflow/utils/yaml_utils.py +179 -0
  645. mlflow/version.py +24 -0
@@ -0,0 +1,691 @@
1
+ import os
2
+ import tempfile
3
+ import types
4
+ import warnings
5
+ from contextlib import contextmanager
6
+ from typing import Any, Optional
7
+
8
+ import numpy as np
9
+ import yaml
10
+
11
+ import mlflow
12
+ import mlflow.utils.autologging_utils
13
+ from mlflow import pyfunc
14
+ from mlflow.models import Model, ModelInputExample, ModelSignature
15
+ from mlflow.models.model import MLMODEL_FILE_NAME
16
+ from mlflow.models.utils import _save_example
17
+ from mlflow.tracking._model_registry import DEFAULT_AWAIT_MAX_SLEEP_SECONDS
18
+ from mlflow.tracking.artifact_utils import _download_artifact_from_uri
19
+ from mlflow.utils.docstring_utils import LOG_MODEL_PARAM_DOCS, format_docstring
20
+ from mlflow.utils.environment import (
21
+ _CONDA_ENV_FILE_NAME,
22
+ _CONSTRAINTS_FILE_NAME,
23
+ _PYTHON_ENV_FILE_NAME,
24
+ _REQUIREMENTS_FILE_NAME,
25
+ _get_pip_deps,
26
+ _mlflow_conda_env,
27
+ _process_conda_env,
28
+ _process_pip_requirements,
29
+ _PythonEnv,
30
+ _validate_env_arguments,
31
+ )
32
+ from mlflow.utils.file_utils import write_to
33
+ from mlflow.utils.model_utils import (
34
+ _add_code_from_conf_to_system_path,
35
+ _get_flavor_configuration,
36
+ _validate_and_copy_code_paths,
37
+ _validate_and_prepare_target_save_path,
38
+ )
39
+ from mlflow.utils.requirements_utils import _get_package_name
40
+ from mlflow.utils.uri import append_to_uri_path
41
+
42
+ FLAVOR_NAME = "shap"
43
+
44
+ _MAXIMUM_BACKGROUND_DATA_SIZE = 100
45
+ _DEFAULT_ARTIFACT_PATH = "model_explanations_shap"
46
+ _SUMMARY_BAR_PLOT_FILE_NAME = "summary_bar_plot.png"
47
+ _BASE_VALUES_FILE_NAME = "base_values.npy"
48
+ _SHAP_VALUES_FILE_NAME = "shap_values.npy"
49
+ _UNKNOWN_MODEL_FLAVOR = "unknown"
50
+ _UNDERLYING_MODEL_SUBPATH = "underlying_model"
51
+
52
+
53
+ def get_underlying_model_flavor(model):
54
+ """
55
+ Find the underlying models flavor.
56
+
57
+ Args:
58
+ model: underlying model of the explainer.
59
+ """
60
+
61
+ # checking if underlying model is wrapped
62
+
63
+ if hasattr(model, "inner_model"):
64
+ unwrapped_model = model.inner_model
65
+
66
+ # check if passed model is a method of object
67
+ if isinstance(unwrapped_model, types.MethodType):
68
+ model_object = unwrapped_model.__self__
69
+
70
+ # check if model object is of type sklearn
71
+ try:
72
+ import sklearn
73
+
74
+ if issubclass(type(model_object), sklearn.base.BaseEstimator):
75
+ return mlflow.sklearn.FLAVOR_NAME
76
+ except ImportError:
77
+ pass
78
+
79
+ # check if passed model is of type pytorch
80
+ try:
81
+ import torch
82
+
83
+ if issubclass(type(unwrapped_model), torch.nn.Module):
84
+ return mlflow.pytorch.FLAVOR_NAME
85
+ except ImportError:
86
+ pass
87
+
88
+ return _UNKNOWN_MODEL_FLAVOR
89
+
90
+
91
+ def get_default_pip_requirements():
92
+ """
93
+ A list of default pip requirements for MLflow Models produced by this flavor. Calls to
94
+ :func:`save_explainer()` and :func:`log_explainer()` produce a pip environment that, at
95
+ minimum, contains these requirements.
96
+ """
97
+ import shap
98
+
99
+ return [f"shap=={shap.__version__}"]
100
+
101
+
102
+ def get_default_conda_env():
103
+ """
104
+ Returns:
105
+ The default Conda environment for MLflow Models produced by calls to
106
+ :func:`save_explainer()` and :func:`log_explainer()`.
107
+ """
108
+ return _mlflow_conda_env(additional_pip_deps=get_default_pip_requirements())
109
+
110
+
111
+ def _load_pyfunc(path):
112
+ """
113
+ Load PyFunc implementation. Called by ``pyfunc.load_model``.
114
+ """
115
+ return _SHAPWrapper(path)
116
+
117
+
118
+ @contextmanager
119
+ def _log_artifact_contextmanager(out_file, artifact_path=None):
120
+ """
121
+ A context manager to make it easier to log an artifact.
122
+ """
123
+ with tempfile.TemporaryDirectory() as tmp_dir:
124
+ tmp_path = os.path.join(tmp_dir, out_file)
125
+ yield tmp_path
126
+ mlflow.log_artifact(tmp_path, artifact_path)
127
+
128
+
129
+ def _log_numpy(numpy_obj, out_file, artifact_path=None):
130
+ """
131
+ Log a numpy object.
132
+ """
133
+ with _log_artifact_contextmanager(out_file, artifact_path) as tmp_path:
134
+ np.save(tmp_path, numpy_obj)
135
+
136
+
137
+ def _log_matplotlib_figure(fig, out_file, artifact_path=None):
138
+ """
139
+ Log a matplotlib figure.
140
+ """
141
+ with _log_artifact_contextmanager(out_file, artifact_path) as tmp_path:
142
+ fig.savefig(tmp_path)
143
+
144
+
145
+ def _get_conda_env_for_underlying_model(underlying_model_path):
146
+ underlying_model_conda_path = os.path.join(underlying_model_path, "conda.yaml")
147
+ with open(underlying_model_conda_path) as underlying_model_conda_file:
148
+ return yaml.safe_load(underlying_model_conda_file)
149
+
150
+
151
+ def log_explanation(predict_function, features, artifact_path=None):
152
+ r"""
153
+ Given a ``predict_function`` capable of computing ML model output on the provided ``features``,
154
+ computes and logs explanations of an ML model's output. Explanations are logged as a directory
155
+ of artifacts containing the following items generated by `SHAP`_ (SHapley Additive
156
+ exPlanations).
157
+
158
+ - Base values
159
+ - SHAP values (computed using `shap.KernelExplainer`_)
160
+ - Summary bar plot (shows the average impact of each feature on model output)
161
+
162
+ Args:
163
+ predict_function:
164
+ A function to compute the output of a model (e.g. ``predict_proba`` method of
165
+ scikit-learn classifiers). Must have the following signature:
166
+
167
+ .. code-block:: python
168
+
169
+ def predict_function(X) -> pred: ...
170
+
171
+ - ``X``: An array-like object whose shape should be (# samples, # features).
172
+ - ``pred``: An array-like object whose shape should be (# samples) for a regressor or
173
+ (# classes, # samples) for a classifier. For a classifier, the values in ``pred``
174
+ should correspond to the predicted probability of each class.
175
+
176
+ Acceptable array-like object types:
177
+
178
+ - ``numpy.array``
179
+ - ``pandas.DataFrame``
180
+ - ``shap.common.DenseData``
181
+ - ``scipy.sparse matrix``
182
+
183
+ features:
184
+ A matrix of features to compute SHAP values with. The provided features should
185
+ have shape (# samples, # features), and can be either of the array-like object
186
+ types listed above.
187
+
188
+ .. note::
189
+ Background data for `shap.KernelExplainer`_ is generated by subsampling ``features``
190
+ with `shap.kmeans`_. The background data size is limited to 100 rows for performance
191
+ reasons.
192
+
193
+ artifact_path:
194
+ The run-relative artifact path to which the explanation is saved.
195
+ If unspecified, defaults to "model_explanations_shap".
196
+
197
+ Returns:
198
+ Artifact URI of the logged explanations.
199
+
200
+ .. _SHAP: https://github.com/slundberg/shap
201
+
202
+ .. _shap.KernelExplainer: https://shap.readthedocs.io/en/latest/generated
203
+ /shap.KernelExplainer.html#shap.KernelExplainer
204
+
205
+ .. _shap.kmeans: https://github.com/slundberg/shap/blob/v0.36.0/shap/utils/_legacy.py#L9
206
+
207
+ .. code-block:: python
208
+ :caption: Example
209
+
210
+ import os
211
+
212
+ import numpy as np
213
+ import pandas as pd
214
+ from sklearn.datasets import load_diabetes
215
+ from sklearn.linear_model import LinearRegression
216
+
217
+ import mlflow
218
+ from mlflow import MlflowClient
219
+
220
+ # prepare training data
221
+ X, y = dataset = load_diabetes(return_X_y=True, as_frame=True)
222
+ X = pd.DataFrame(dataset.data[:50, :8], columns=dataset.feature_names[:8])
223
+ y = dataset.target[:50]
224
+
225
+ # train a model
226
+ model = LinearRegression()
227
+ model.fit(X, y)
228
+
229
+ # log an explanation
230
+ with mlflow.start_run() as run:
231
+ mlflow.shap.log_explanation(model.predict, X)
232
+
233
+ # list artifacts
234
+ client = MlflowClient()
235
+ artifact_path = "model_explanations_shap"
236
+ artifacts = [x.path for x in client.list_artifacts(run.info.run_id, artifact_path)]
237
+ print("# artifacts:")
238
+ print(artifacts)
239
+
240
+ # load back the logged explanation
241
+ dst_path = client.download_artifacts(run.info.run_id, artifact_path)
242
+ base_values = np.load(os.path.join(dst_path, "base_values.npy"))
243
+ shap_values = np.load(os.path.join(dst_path, "shap_values.npy"))
244
+
245
+ print("\n# base_values:")
246
+ print(base_values)
247
+ print("\n# shap_values:")
248
+ print(shap_values[:3])
249
+
250
+ .. code-block:: text
251
+ :caption: Output
252
+
253
+ # artifacts:
254
+ ['model_explanations_shap/base_values.npy',
255
+ 'model_explanations_shap/shap_values.npy',
256
+ 'model_explanations_shap/summary_bar_plot.png']
257
+
258
+ # base_values:
259
+ 20.502000000000002
260
+
261
+ # shap_values:
262
+ [[ 2.09975523 0.4746513 7.63759026 0. ]
263
+ [ 2.00883109 -0.18816665 -0.14419184 0. ]
264
+ [ 2.00891772 -0.18816665 -0.14419184 0. ]]
265
+
266
+ .. figure:: ../_static/images/shap-ui-screenshot.png
267
+
268
+ Logged artifacts
269
+ """
270
+ import matplotlib.pyplot as plt
271
+ import shap
272
+
273
+ artifact_path = _DEFAULT_ARTIFACT_PATH if artifact_path is None else artifact_path
274
+ with mlflow.utils.autologging_utils.disable_autologging():
275
+ background_data = shap.kmeans(features, min(_MAXIMUM_BACKGROUND_DATA_SIZE, len(features)))
276
+ explainer = shap.KernelExplainer(predict_function, background_data)
277
+ shap_values = explainer.shap_values(features)
278
+
279
+ _log_numpy(explainer.expected_value, _BASE_VALUES_FILE_NAME, artifact_path)
280
+ _log_numpy(shap_values, _SHAP_VALUES_FILE_NAME, artifact_path)
281
+
282
+ shap.summary_plot(shap_values, features, plot_type="bar", show=False)
283
+ fig = plt.gcf()
284
+ fig.tight_layout()
285
+ _log_matplotlib_figure(fig, _SUMMARY_BAR_PLOT_FILE_NAME, artifact_path)
286
+ plt.close(fig)
287
+
288
+ return append_to_uri_path(mlflow.active_run().info.artifact_uri, artifact_path)
289
+
290
+
291
+ @format_docstring(LOG_MODEL_PARAM_DOCS.format(package_name=FLAVOR_NAME))
292
+ def log_explainer(
293
+ explainer,
294
+ artifact_path: Optional[str] = None,
295
+ serialize_model_using_mlflow=True,
296
+ conda_env=None,
297
+ code_paths=None,
298
+ registered_model_name=None,
299
+ signature: ModelSignature = None,
300
+ input_example: ModelInputExample = None,
301
+ await_registration_for=DEFAULT_AWAIT_MAX_SLEEP_SECONDS,
302
+ pip_requirements=None,
303
+ extra_pip_requirements=None,
304
+ name: Optional[str] = None,
305
+ metadata=None,
306
+ params: Optional[dict[str, Any]] = None,
307
+ tags: Optional[dict[str, Any]] = None,
308
+ model_type: Optional[str] = None,
309
+ step: int = 0,
310
+ model_id: Optional[str] = None,
311
+ ):
312
+ """
313
+ Log an SHAP explainer as an MLflow artifact for the current run.
314
+
315
+ Args:
316
+ explainer: SHAP explainer to be saved.
317
+ artifact_path: Deprecated. Use `name` instead.
318
+ serialize_model_using_mlflow: When set to True, MLflow will extract the underlying
319
+ model and serialize it as an MLmodel, otherwise it uses SHAP's internal serialization.
320
+ Defaults to True. Currently MLflow serialization is only supported for models of
321
+ 'sklearn' or 'pytorch' flavors.
322
+ conda_env: {{ conda_env }}
323
+ code_paths: {{ code_paths }}
324
+ registered_model_name: If given, create a model version under ``registered_model_name``,
325
+ also creating a registered model if one with the given name does not exist.
326
+ signature: :py:class:`ModelSignature <mlflow.models.ModelSignature>` describes model input
327
+ and output :py:class:`Schema <mlflow.types.Schema>`. The model signature can be
328
+ :py:func:`inferred <mlflow.models.infer_signature>` from datasets with valid model input
329
+ (e.g. the training dataset with target column omitted) and valid model output
330
+ (e.g. model predictions generated on the training dataset), for example:
331
+
332
+ .. code-block:: python
333
+
334
+ from mlflow.models import infer_signature
335
+
336
+ train = df.drop_column("target_label")
337
+ predictions = ... # compute model predictions
338
+ signature = infer_signature(train, predictions)
339
+ input_example: {{ input_example }}
340
+ await_registration_for: Number of seconds to wait for the model version to finish
341
+ being created and is in ``READY`` status. By default, the function waits for five
342
+ minutes. Specify 0 or None to skip waiting.
343
+ pip_requirements: {{ pip_requirements }}
344
+ extra_pip_requirements: {{ extra_pip_requirements }}
345
+ name: {{ name }}
346
+ metadata: {{ metadata }}
347
+ params: {{ params }}
348
+ tags: {{ tags }}
349
+ model_type: {{ model_type }}
350
+ step: {{ step }}
351
+ model_id: {{ model_id }}
352
+ """
353
+
354
+ return Model.log(
355
+ artifact_path=artifact_path,
356
+ name=name,
357
+ flavor=mlflow.shap,
358
+ explainer=explainer,
359
+ conda_env=conda_env,
360
+ code_paths=code_paths,
361
+ serialize_model_using_mlflow=serialize_model_using_mlflow,
362
+ registered_model_name=registered_model_name,
363
+ signature=signature,
364
+ input_example=input_example,
365
+ await_registration_for=await_registration_for,
366
+ pip_requirements=pip_requirements,
367
+ extra_pip_requirements=extra_pip_requirements,
368
+ metadata=metadata,
369
+ params=params,
370
+ tags=tags,
371
+ model_type=model_type,
372
+ step=step,
373
+ model_id=model_id,
374
+ )
375
+
376
+
377
+ @format_docstring(LOG_MODEL_PARAM_DOCS.format(package_name=FLAVOR_NAME))
378
+ def save_explainer(
379
+ explainer,
380
+ path,
381
+ serialize_model_using_mlflow=True,
382
+ conda_env=None,
383
+ code_paths=None,
384
+ mlflow_model=None,
385
+ signature: ModelSignature = None,
386
+ input_example: ModelInputExample = None,
387
+ pip_requirements=None,
388
+ extra_pip_requirements=None,
389
+ metadata=None,
390
+ ):
391
+ """
392
+ Save a SHAP explainer to a path on the local file system. Produces an MLflow Model
393
+ containing the following flavors:
394
+
395
+ - :py:mod:`mlflow.shap`
396
+ - :py:mod:`mlflow.pyfunc`
397
+
398
+ Args:
399
+ explainer: SHAP explainer to be saved.
400
+ path: Local path where the explainer is to be saved.
401
+ serialize_model_using_mlflow: When set to True, MLflow will extract the underlying
402
+ model and serialize it as an MLmodel, otherwise it uses SHAP's internal serialization.
403
+ Defaults to True. Currently MLflow serialization is only supported for models of
404
+ 'sklearn' or 'pytorch' flavors.
405
+ conda_env: {{ conda_env }}
406
+ code_paths: {{ code_paths }}
407
+ mlflow_model: :py:mod:`mlflow.models.Model` this flavor is being added to.
408
+ signature: :py:class:`ModelSignature <mlflow.models.ModelSignature>` describes model input
409
+ and output :py:class:`Schema <mlflow.types.Schema>`. The model signature can be
410
+ :py:func:`inferred <mlflow.models.infer_signature>` from datasets with valid model input
411
+ (e.g. the training dataset with target column omitted) and valid model output (e.g.
412
+ model predictions generated on the training dataset), for example:
413
+
414
+ .. code-block:: python
415
+
416
+ from mlflow.models import infer_signature
417
+
418
+ train = df.drop_column("target_label")
419
+ predictions = ... # compute model predictions
420
+ signature = infer_signature(train, predictions)
421
+ input_example: {{ input_example }}
422
+ pip_requirements: {{ pip_requirements }}
423
+ extra_pip_requirements: {{ extra_pip_requirements }}
424
+ metadata: {{ metadata }}
425
+ """
426
+ import shap
427
+
428
+ _validate_env_arguments(conda_env, pip_requirements, extra_pip_requirements)
429
+
430
+ _validate_and_prepare_target_save_path(path)
431
+ code_dir_subpath = _validate_and_copy_code_paths(code_paths, path)
432
+
433
+ if mlflow_model is None:
434
+ mlflow_model = Model()
435
+ if signature is not None:
436
+ mlflow_model.signature = signature
437
+ if input_example is not None:
438
+ _save_example(mlflow_model, input_example, path)
439
+ if metadata is not None:
440
+ mlflow_model.metadata = metadata
441
+
442
+ underlying_model_flavor = None
443
+ underlying_model_path = None
444
+ serializable_by_mlflow = False
445
+
446
+ # saving the underlying model if required
447
+ if serialize_model_using_mlflow:
448
+ underlying_model_flavor = get_underlying_model_flavor(explainer.model)
449
+
450
+ if underlying_model_flavor != _UNKNOWN_MODEL_FLAVOR:
451
+ serializable_by_mlflow = True # prevents SHAP from serializing the underlying model
452
+ underlying_model_path = os.path.join(path, _UNDERLYING_MODEL_SUBPATH)
453
+ else:
454
+ warnings.warn(
455
+ "Unable to serialize underlying model using MLflow, will use SHAP serialization"
456
+ )
457
+
458
+ if underlying_model_flavor == mlflow.sklearn.FLAVOR_NAME:
459
+ mlflow.sklearn.save_model(explainer.model.inner_model.__self__, underlying_model_path)
460
+ elif underlying_model_flavor == mlflow.pytorch.FLAVOR_NAME:
461
+ mlflow.pytorch.save_model(explainer.model.inner_model, underlying_model_path)
462
+
463
+ # saving the explainer object
464
+ explainer_data_subpath = "explainer.shap"
465
+ explainer_output_path = os.path.join(path, explainer_data_subpath)
466
+ with open(explainer_output_path, "wb") as explainer_output_file_handle:
467
+ if serialize_model_using_mlflow and serializable_by_mlflow:
468
+ explainer.save(explainer_output_file_handle, model_saver=False)
469
+ else:
470
+ explainer.save(explainer_output_file_handle)
471
+
472
+ pyfunc.add_to_model(
473
+ mlflow_model,
474
+ loader_module="mlflow.shap",
475
+ model_path=explainer_data_subpath,
476
+ underlying_model_flavor=underlying_model_flavor,
477
+ conda_env=_CONDA_ENV_FILE_NAME,
478
+ python_env=_PYTHON_ENV_FILE_NAME,
479
+ code=code_dir_subpath,
480
+ )
481
+
482
+ mlflow_model.add_flavor(
483
+ FLAVOR_NAME,
484
+ shap_version=shap.__version__,
485
+ serialized_explainer=explainer_data_subpath,
486
+ underlying_model_flavor=underlying_model_flavor,
487
+ code=code_dir_subpath,
488
+ )
489
+
490
+ mlflow_model.save(os.path.join(path, MLMODEL_FILE_NAME))
491
+
492
+ if conda_env is None:
493
+ if pip_requirements is None:
494
+ default_reqs = get_default_pip_requirements()
495
+ # To ensure `_load_pyfunc` can successfully load the model during the dependency
496
+ # inference, `mlflow_model.save` must be called beforehand to save an MLmodel file.
497
+ inferred_reqs = mlflow.models.infer_pip_requirements(
498
+ path,
499
+ FLAVOR_NAME,
500
+ fallback=default_reqs,
501
+ )
502
+ default_reqs = sorted(set(inferred_reqs).union(default_reqs))
503
+ else:
504
+ default_reqs = None
505
+ conda_env, pip_requirements, pip_constraints = _process_pip_requirements(
506
+ default_reqs,
507
+ pip_requirements,
508
+ extra_pip_requirements,
509
+ )
510
+ else:
511
+ conda_env, pip_requirements, pip_constraints = _process_conda_env(conda_env)
512
+
513
+ if underlying_model_path is not None:
514
+ underlying_model_conda_env = _get_conda_env_for_underlying_model(underlying_model_path)
515
+ conda_env = _merge_environments(conda_env, underlying_model_conda_env)
516
+ pip_requirements = _get_pip_deps(conda_env)
517
+
518
+ with open(os.path.join(path, _CONDA_ENV_FILE_NAME), "w") as f:
519
+ yaml.safe_dump(conda_env, stream=f, default_flow_style=False)
520
+
521
+ # Save `constraints.txt` if necessary
522
+ if pip_constraints:
523
+ write_to(os.path.join(path, _CONSTRAINTS_FILE_NAME), "\n".join(pip_constraints))
524
+
525
+ # Save `requirements.txt`
526
+ write_to(os.path.join(path, _REQUIREMENTS_FILE_NAME), "\n".join(pip_requirements))
527
+
528
+ _PythonEnv.current().to_yaml(os.path.join(path, _PYTHON_ENV_FILE_NAME))
529
+
530
+
531
+ # Defining save_model (Required by Model.log) to refer to save_explainer
532
+ save_model = save_explainer
533
+
534
+
535
+ def _get_conda_and_pip_dependencies(conda_env):
536
+ """
537
+ Extract conda and pip dependencies from conda environments
538
+
539
+ Args:
540
+ conda_env: Conda environment
541
+ """
542
+
543
+ conda_deps = []
544
+ # NB: Set operations are required in case there are multiple references of MLflow as a
545
+ # dependency to ensure that duplicate entries are not present in the final consolidated
546
+ # dependency list.
547
+ pip_deps_set = set()
548
+
549
+ for dependency in conda_env["dependencies"]:
550
+ if isinstance(dependency, dict) and dependency["pip"]:
551
+ for pip_dependency in dependency["pip"]:
552
+ if pip_dependency != "mlflow":
553
+ pip_deps_set.add(pip_dependency)
554
+ else:
555
+ package_name = _get_package_name(dependency)
556
+ if package_name is not None and package_name not in ["python", "pip"]:
557
+ conda_deps.append(dependency)
558
+
559
+ return conda_deps, sorted(pip_deps_set)
560
+
561
+
562
+ def _union_lists(l1, l2):
563
+ """
564
+ Returns the union of two lists as a new list.
565
+ """
566
+ return list(dict.fromkeys(l1 + l2))
567
+
568
+
569
+ def _merge_environments(shap_environment, model_environment):
570
+ """
571
+ Merge conda environments of underlying model and shap.
572
+
573
+ Args:
574
+ shap_environment: SHAP conda environment.
575
+ model_environment: Underlying model conda environment.
576
+ """
577
+ # merge the channels from the two environments and remove the default conda
578
+ # channels if present since its added later in `_mlflow_conda_env`
579
+ merged_conda_channels = _union_lists(
580
+ shap_environment["channels"], model_environment["channels"]
581
+ )
582
+ merged_conda_channels = [x for x in merged_conda_channels if x != "conda-forge"]
583
+
584
+ shap_conda_deps, shap_pip_deps = _get_conda_and_pip_dependencies(shap_environment)
585
+ model_conda_deps, model_pip_deps = _get_conda_and_pip_dependencies(model_environment)
586
+
587
+ merged_conda_deps = _union_lists(shap_conda_deps, model_conda_deps)
588
+ merged_pip_deps = _union_lists(shap_pip_deps, model_pip_deps)
589
+ return _mlflow_conda_env(
590
+ additional_conda_deps=merged_conda_deps,
591
+ additional_pip_deps=merged_pip_deps,
592
+ additional_conda_channels=merged_conda_channels,
593
+ )
594
+
595
+
596
+ def load_explainer(model_uri):
597
+ """
598
+ Load a SHAP explainer from a local file or a run.
599
+
600
+ Args:
601
+ model_uri: The location, in URI format, of the MLflow model. For example:
602
+
603
+ - ``/Users/me/path/to/local/model``
604
+ - ``relative/path/to/local/model``
605
+ - ``s3://my_bucket/path/to/model``
606
+ - ``runs:/<mlflow_run_id>/run-relative/path/to/model``
607
+ - ``models:/<model_name>/<model_version>``
608
+ - ``models:/<model_name>/<stage>``
609
+
610
+ For more information about supported URI schemes, see
611
+ `Referencing Artifacts <https://www.mlflow.org/docs/latest/concepts.html#
612
+ artifact-locations>`_.
613
+
614
+ Returns:
615
+ A SHAP explainer.
616
+ """
617
+
618
+ explainer_path = _download_artifact_from_uri(artifact_uri=model_uri)
619
+ flavor_conf = _get_flavor_configuration(model_path=explainer_path, flavor_name=FLAVOR_NAME)
620
+ _add_code_from_conf_to_system_path(explainer_path, flavor_conf)
621
+ explainer_artifacts_path = os.path.join(explainer_path, flavor_conf["serialized_explainer"])
622
+ underlying_model_flavor = flavor_conf["underlying_model_flavor"]
623
+ model = None
624
+
625
+ if underlying_model_flavor != _UNKNOWN_MODEL_FLAVOR:
626
+ underlying_model_path = os.path.join(explainer_path, _UNDERLYING_MODEL_SUBPATH)
627
+ if underlying_model_flavor == mlflow.sklearn.FLAVOR_NAME:
628
+ model = mlflow.sklearn._load_pyfunc(underlying_model_path).predict
629
+ elif underlying_model_flavor == mlflow.pytorch.FLAVOR_NAME:
630
+ model = mlflow.pytorch._load_model(os.path.join(underlying_model_path, "data"))
631
+
632
+ return _load_explainer(explainer_file=explainer_artifacts_path, model=model)
633
+
634
+
635
+ def _load_explainer(explainer_file, model=None):
636
+ """
637
+ Load a SHAP explainer saved as an MLflow artifact on the local file system.
638
+
639
+ Args:
640
+ explainer_file: Local filesystem path to the MLflow Model saved with the ``shap`` flavor.
641
+ model: Model to override underlying explainer model.
642
+
643
+ """
644
+ import shap
645
+
646
+ def inject_model_loader(_in_file):
647
+ return model
648
+
649
+ with open(explainer_file, "rb") as explainer:
650
+ if model is None:
651
+ explainer = shap.Explainer.load(explainer)
652
+ else:
653
+ explainer = shap.Explainer.load(explainer, model_loader=inject_model_loader)
654
+ return explainer
655
+
656
+
657
+ class _SHAPWrapper:
658
+ def __init__(self, path):
659
+ flavor_conf = _get_flavor_configuration(model_path=path, flavor_name=FLAVOR_NAME)
660
+ shap_explainer_artifacts_path = os.path.join(path, flavor_conf["serialized_explainer"])
661
+ underlying_model_flavor = flavor_conf["underlying_model_flavor"]
662
+ model = None
663
+ if underlying_model_flavor != _UNKNOWN_MODEL_FLAVOR:
664
+ underlying_model_path = os.path.join(path, _UNDERLYING_MODEL_SUBPATH)
665
+ if underlying_model_flavor == mlflow.sklearn.FLAVOR_NAME:
666
+ model = mlflow.sklearn._load_pyfunc(underlying_model_path).predict
667
+ elif underlying_model_flavor == mlflow.pytorch.FLAVOR_NAME:
668
+ model = mlflow.pytorch._load_model(os.path.join(underlying_model_path, "data"))
669
+
670
+ self.explainer = _load_explainer(explainer_file=shap_explainer_artifacts_path, model=model)
671
+
672
+ def get_raw_model(self):
673
+ """
674
+ Returns the underlying model.
675
+ """
676
+ return self.explainer
677
+
678
+ def predict(
679
+ self,
680
+ dataframe,
681
+ params: Optional[dict[str, Any]] = None,
682
+ ):
683
+ """
684
+ Args:
685
+ dataframe: Model input data.
686
+ params: Additional parameters to pass to the model for inference.
687
+
688
+ Returns:
689
+ Model predictions.
690
+ """
691
+ return self.explainer(dataframe.values).values